View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16460_low_8 (Length: 419)
Name: NF16460_low_8
Description: NF16460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16460_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 43 - 399
Target Start/End: Complemental strand, 32266822 - 32266464
Alignment:
| Q |
43 |
tttgtgttgctgctacaacaatgaatctaaggaaatctaagagaagaattaggttcaagtctattactctttcaaatcatcaaccttcttcttcttctgt |
142 |
Q |
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| T |
32266822 |
tttgtgttgctgctacaacaatgaatctaaggaaatctaagagaagaattaggttcaagtctattactctttcaaatcagcaaccttcttcttcttctgt |
32266723 |
T |
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| Q |
143 |
taatggcggttcttcatctgtttctgagatggaacaggaacaacaagaagaggttgctagatgtttgatgttgttgtctagag--annnnnnnggtcata |
240 |
Q |
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| T |
32266722 |
taatggtggttcttcatctgtttctgagatggaacaggaacaacaagaagaggttgctagatgtttgatgttgttgtctagagtattttttttggtcata |
32266623 |
T |
|
| Q |
241 |
agggtcgttttgtttctgaatcttctgataataacaatgagattgttttagagacgaaatcgaagattgttatcagaaatggtaacaaatttgtagctaa |
340 |
Q |
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| T |
32266622 |
agggtcgttttgtttctgaatcttctgataataacaatgagattgttctagagacgaaatccaagattgttatcagaaatggtaacaaatttgtagctaa |
32266523 |
T |
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| Q |
341 |
taatgctcgtgaatttgttgcggagaagaaaaagaagctgaaaatggttgggattggtg |
399 |
Q |
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| T |
32266522 |
tcatgctcgtgaatttgttgcggagaagaaaaagaagctgaaaatggttgggattggtg |
32266464 |
T |
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