View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16461_high_14 (Length: 300)
Name: NF16461_high_14
Description: NF16461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16461_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 56 - 282
Target Start/End: Original strand, 45316666 - 45316892
Alignment:
| Q |
56 |
atccacacacatctatttggaatgttcaactgatcttttctcttcaacttcctatgtttaaatcattttagtaatcctctacgcaggaactccccggaga |
155 |
Q |
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| T |
45316666 |
atccacacacatctatttggaatgttcaactgatattttctcttcaacttcctatgtttaaatcattttagtaatcctctaggcaggaactccccggaga |
45316765 |
T |
|
| Q |
156 |
cctcctctacaagaaaccaagaactttgatcaaagaaacatatattgaattggttgttaaatgcatccatggtaacttgcaagtggctggaatttctaat |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45316766 |
cctcctctacaagaaaccaagaactttgatcaaagaaacatatattgaattggttgttaaatgcatccatggtaacttgcaagtggctggaatttctaat |
45316865 |
T |
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| Q |
256 |
gcaatccttctagtctcccacaatatg |
282 |
Q |
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||||||||||||||||||||||||||| |
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| T |
45316866 |
gcaatccttctagtctcccacaatatg |
45316892 |
T |
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