View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16461_low_25 (Length: 248)
Name: NF16461_low_25
Description: NF16461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16461_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 21 - 234
Target Start/End: Original strand, 8921154 - 8921368
Alignment:
| Q |
21 |
aagtataattcaattcttaaacgaatgagatagtgatcacaagtactctaaaatctctcggttaactatttaattacctccactaattatctctctccac |
120 |
Q |
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| T |
8921154 |
aagtataattcaattcttaaacgaatgagatagtgatcacaagtactctaaaatctctcggttaactatttaattacctccactaattatctctctccac |
8921253 |
T |
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| Q |
121 |
ttcaagagacacaatctggcgcaggcactatagaaagcaacactgcatgtgagtaaagacctaaagttgaatgaatctaatccccgtc-aactctacatg |
219 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
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| T |
8921254 |
ttcatgagacacaatctggcgcaggcactatagaaagcaacactgcatgtgagtaaagacctaaagttgaatgaatctaatccccgtcaaactctgcatg |
8921353 |
T |
|
| Q |
220 |
ccccatacacctttg |
234 |
Q |
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||||||||||||||| |
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| T |
8921354 |
ccccatacacctttg |
8921368 |
T |
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