View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16466_low_7 (Length: 290)
Name: NF16466_low_7
Description: NF16466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16466_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 269
Target Start/End: Complemental strand, 37460822 - 37460566
Alignment:
| Q |
10 |
attatactgagctaaaaaatgggggtaaaacaacgttttaaattgccgttcgcaatctcatttgtgaccataagatcatcaattttgagacctctgagac |
109 |
Q |
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| T |
37460822 |
attatactgagctaaaaaatgggggtaaaacaacgttttaaattgccgttcgcaatctcatttgtgaccataagatcgtcaattttgagacctctgagac |
37460723 |
T |
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| Q |
110 |
tgcatcaactgcatttgtctatagtttttcgcaatactaatcctttgttcaacaaatacggtacatgaatctaaatttcatgagtttatggacctcattg |
209 |
Q |
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| T |
37460722 |
tgcatcaactgcatttgtctataatttttcgcaatactaatcctttgttcaacaaat-tggtacatgaatctaaatttcatgagtttatggacctcattg |
37460624 |
T |
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| Q |
210 |
caactatataaaacnnnnnnnnnnnnncctttaagaatgacattgtaagatgcaaacctt |
269 |
Q |
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| T |
37460623 |
caactatataaaac--tttttttttttcctttaagaatgacattgtaagatgcaaacctt |
37460566 |
T |
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