View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16468_low_18 (Length: 323)
Name: NF16468_low_18
Description: NF16468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16468_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 10 - 298
Target Start/End: Original strand, 41103885 - 41104173
Alignment:
| Q |
10 |
acatcatcacggattgtagactcttaacggctttaagatagcgtttggcttcttgacgagtgttggtgaaaagagaattagaatggttagaagaagtaga |
109 |
Q |
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| T |
41103885 |
acatcatagcggattgtagactcttaacggctttaagatagcgtttggcttcttgacgagtgttggtgaaaagagaattagaatggttagaagaagtaga |
41103984 |
T |
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| Q |
110 |
gacagtgttccatttggttataagagtgcgtgcggtttctatgttttcatcaactattgcgtctgagaatgttttgttttgtggtgatggtaacggtgat |
209 |
Q |
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| T |
41103985 |
gacagtgttccatttggttataagagtgcgtgcggtttctatgttttcatcaactattgcgtctgagaatgttttgttttgtggtgatggtaacggtgat |
41104084 |
T |
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| Q |
210 |
gatgatttgggtggtgatggtttgaagaaaaagaagtttctaggtttagacattattgaagggtttatttgtgtgtgattaattaatgt |
298 |
Q |
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| T |
41104085 |
gatgatttgggtggtgatggtttgaagaaaaagaagtttctaggtttagacattattgaagggtttatttgtgtgtgattaattaatgt |
41104173 |
T |
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