View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16468_low_6 (Length: 546)
Name: NF16468_low_6
Description: NF16468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16468_low_6 |
 | |
|
| [»] scaffold0479 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0045 (2 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 420; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 18 - 489
Target Start/End: Original strand, 16698134 - 16698605
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacac |
117 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16698134 |
aggtgcatgatgtacatatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgcattgcaagggacac |
16698233 |
T |
|
| Q |
118 |
ttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcaca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16698234 |
ttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaggcaacttttgcttgcttctcctgtaaataggatcatgatcaagcattcaca |
16698333 |
T |
|
| Q |
218 |
atacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaataga |
317 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16698334 |
atacaccacaagagaagaacaacaaaaagcaagagaggaagatagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagg |
16698433 |
T |
|
| Q |
318 |
gacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaagttgtattcccattatcattatagtggaagt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16698434 |
gacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacataagggtgaagttgtattcccattatcattatagtggaagt |
16698533 |
T |
|
| Q |
418 |
tttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaattcttt |
489 |
Q |
| |
|
||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16698534 |
tttaagaggtccaagggtcccataatttttccctttctcacattgagaaggatttccacactaaaattcttt |
16698605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 387 - 530
Target Start/End: Complemental strand, 22764003 - 22763858
Alignment:
| Q |
387 |
gttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaat-- |
484 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
22764003 |
gttgtattcccattatcattatagcataagttttaagaggcccaatggtcccgtggtttttccctttctcatattgagaaggttttccatgctaaaattc |
22763904 |
T |
|
| Q |
485 |
tctttgtgtcattaagcttatatttcgcgtttccgctagtgcctat |
530 |
Q |
| |
|
||||||| |||||| ||||||||||| |||||| |||||||||||| |
|
|
| T |
22763903 |
tctttgtatcattacgcttatatttcacgtttctgctagtgcctat |
22763858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 33808037 - 33808145
Alignment:
| Q |
388 |
ttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaattct |
487 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||||||||||| | ||||||| |||||||| |||| ||||||||||||||| ||||||| |||||||| | |
|
|
| T |
33808037 |
ttgtattcccattattattatagtgga-gatttaagaggcctacgggtcccgtggttttt-ccttactcacattgagaaggttttccacgctaaaatttt |
33808134 |
T |
|
| Q |
488 |
-ttgtgtcatt |
497 |
Q |
| |
|
|||||||||| |
|
|
| T |
33808135 |
gttgtgtcatt |
33808145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 33811691 - 33811799
Alignment:
| Q |
388 |
ttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaattct |
487 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||||||||||| | ||||||| |||||||| |||| ||||||||||||||| ||||||| |||||||| | |
|
|
| T |
33811691 |
ttgtattcccattattattatagtgga-gatttaagaggcctacgggtcccgtggttttt-ccttactcacattgagaaggttttccacgctaaaatttt |
33811788 |
T |
|
| Q |
488 |
-ttgtgtcatt |
497 |
Q |
| |
|
|||||||||| |
|
|
| T |
33811789 |
gttgtgtcatt |
33811799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 33816609 - 33816717
Alignment:
| Q |
388 |
ttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaattct |
487 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||||||||||| | ||||||| |||||||| |||| ||||||||||||||| ||||||| |||||||| | |
|
|
| T |
33816609 |
ttgtattcccattattattatagtgga-gatttaagaggcctacgggtcccgtggttttt-ccttactcacattgagaaggttttccacgctaaaatttt |
33816706 |
T |
|
| Q |
488 |
-ttgtgtcatt |
497 |
Q |
| |
|
|||||||||| |
|
|
| T |
33816707 |
gttgtgtcatt |
33816717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 289; Significance: 1e-162; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 21 - 530
Target Start/End: Complemental strand, 54967762 - 54967254
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
54967762 |
tgcatggtgtacacatggtgtagtgtatgagtaacacatggtgtaatgcatg-------agagacacttggtgtggtgcatgcattgcaagggacacttg |
54967670 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaata |
220 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||| ||||||||||||||||||| | |
|
|
| T |
54967669 |
gtgttttgcatgaaaggcaaatgacaagtgtcttcatgcatgtaaggcaactttggcttgctcctcctataaataggaccatgatcaagcattcacaaca |
54967570 |
T |
|
| Q |
221 |
caccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagac |
320 |
Q |
| |
|
||||| |||||| |||||||||| ||||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
54967569 |
caccataagagaagaacaacaaagagcaagagagaaagagaaccttgctcaagagaaaagtcatcctcatagagagttttcttgtgagagaaatagtgag |
54967470 |
T |
|
| Q |
321 |
ccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtggaag- |
416 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
54967469 |
ccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattatagtggaagt |
54967370 |
T |
|
| Q |
417 |
ttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttcgcgt |
514 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||| ||||||| |||||||||||||| |||| |||||| ||| |
|
|
| T |
54967369 |
ttttaagaggcccaagggtcccgtggtttttccctttctcatattgagaaggttttccacgctaaaattctctttgtgtcattacgcttttatttcacgt |
54967270 |
T |
|
| Q |
515 |
ttccgctagtgcctat |
530 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
54967269 |
ttccgctagtgcctat |
54967254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 21 - 526
Target Start/End: Complemental strand, 54980394 - 54979890
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
54980394 |
tgcatggtgtacacatggtgtagtgtatgagtaacacatggtgtaatgcatg-------agagacacttggtgtggtgcatgcattgcaagggacacttg |
54980302 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaata |
220 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||| ||||||||||||||||||| | |
|
|
| T |
54980301 |
gtgttttgcatgaaaggcaaatgacaagtgtcttcatgcatgtaaggcaactttggcttgctcctcctataaataggaccatgatcaagcattcacaaca |
54980202 |
T |
|
| Q |
221 |
caccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagac |
320 |
Q |
| |
|
||||| |||||| |||||||||| ||||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
54980201 |
caccataagagaagaacaacaaagagcaagagagaaagagaaccttgctcaagagaaaagtcatcctcatagagagttttcttgtgagagaaatagcgag |
54980102 |
T |
|
| Q |
321 |
ccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtggaag- |
416 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
54980101 |
ccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattatagtggaagt |
54980002 |
T |
|
| Q |
417 |
ttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttcgcgt |
514 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||| |||||||||| |||||| ||||||| |||||||||||||| ||| |||||| ||| |
|
|
| T |
54980001 |
ttttaagaggcccaagggtcccgtggtttttccctttctcatattgagaaggttttccatgctaaaattctctttgtgtcattacacttttatttcacgt |
54979902 |
T |
|
| Q |
515 |
ttccgctagtgc |
526 |
Q |
| |
|
|||||||||||| |
|
|
| T |
54979901 |
ttccgctagtgc |
54979890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 21 - 530
Target Start/End: Complemental strand, 44783074 - 44782568
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||| ||| |||||| ||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
44783074 |
tgcatggtgtacacatggtgtagtgtatgagtaacacatggtgtaatgcatg-------agagacatttggtgtggtgcatgcattgcaagggacacttg |
44782982 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaata |
220 |
Q |
| |
|
||||||||| ||| |||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||| |||||||||| || | |
|
|
| T |
44782981 |
gtgttttgcataaaaggcaaatgacaaatgtcttcatgcatgtaaggcaactttggcttgcttctcctataaataggaccatgagcaagcattcaaaaca |
44782882 |
T |
|
| Q |
221 |
caccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagac |
320 |
Q |
| |
|
|||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
44782881 |
caccacaagagaagaacaacaaagagcaagaga--aagagagccttgctcaagagaaaagtcatcctcatagagagttttcttgtgagagaaatagtgag |
44782784 |
T |
|
| Q |
321 |
ccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtggaagt |
417 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
44782783 |
ccaatttgtgagagtgttccttgcaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattatagtggaagt |
44782684 |
T |
|
| Q |
418 |
tttaagaggcccaagggtcccatggtttttt-cctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttcgcgt |
514 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| ||||||||| |||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| ||| |
|
|
| T |
44782683 |
tttaagaggtccaagggtcccgtggttttttccctttctcatattgagaaggttttccacgctaaaattctctttgtgtcattacgtttatatttcacgt |
44782584 |
T |
|
| Q |
515 |
ttccgctagtgcctat |
530 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
44782583 |
ttccgctagtgtctat |
44782568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 522
Target Start/End: Original strand, 39298439 - 39298947
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacac |
117 |
Q |
| |
|
||||||||| ||||||||| |||||||||| || ||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
39298439 |
aggtgcatggtgtacacatagtgtagtgtacgagtaacatatgttgtgatgcatgcattgcaagagacacatggtgtgatgcatgttttgcaagggacac |
39298538 |
T |
|
| Q |
118 |
ttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcaca |
217 |
Q |
| |
|
||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| | ||||| ||||||||||| |
|
|
| T |
39298539 |
ttggtgttttgcatgaaaagcaaatgacaagtgtcttcatgcatgtaaatgaactttggcttgcttctcctataaatagaaccatgagtaagcattcaca |
39298638 |
T |
|
| Q |
218 |
atacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaa--gagaaaagtgatcctcatagagagttttcttgtgggagaaata |
315 |
Q |
| |
|
| ||||||||||| | |||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||| ||||||| ||||| |||||||| |
|
|
| T |
39298639 |
acacaccacaagataagaacaacaaaaagcaagagagaaagagagtcttgctcaaatgagaaaagtgatcctcatggagagttcctttgtgagagaaata |
39298738 |
T |
|
| Q |
316 |
gagacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaa---gttgtattcccattatcattatagtg |
412 |
Q |
| |
|
| || |||||| ||||||||| | |||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
39298739 |
gtgagccaatttgtgagagtg-tccttacaaattgagagatatattgtagttagatccacctaagggtgaagttgttgtattccctttatcattatagtg |
39298837 |
T |
|
| Q |
413 |
gaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttc |
510 |
Q |
| |
|
|||| |||||||||| |||||||||| | | ||||||||| |||||||||||||| ||| ||||||||||| |||| ||||||||| |||||||||| |
|
|
| T |
39298838 |
gaag-tttaagaggcacaagggtcccgt-gatttttccttcatcacattgagaaggtttttcacactaaaattatcttcgtgtcattacacttatatttc |
39298935 |
T |
|
| Q |
511 |
gcgtttccgcta |
522 |
Q |
| |
|
|||||| |||| |
|
|
| T |
39298936 |
acgtttctgcta |
39298947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 38 - 485
Target Start/End: Original strand, 17645461 - 17645893
Alignment:
| Q |
38 |
gtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttgatgttttgcacgaaaac |
137 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||| |||| |
|
|
| T |
17645461 |
gtgtagtgtatgagtaacatatgttgtggtgcatgcattgcaagagacacatggtgcggtgcattcattggaagggacacttggtgttttgcatgaaagg |
17645560 |
T |
|
| Q |
138 |
caaatgacaagtgtcttcatgcatgtaaagc-aacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaatacaccacaagagacgaa |
236 |
Q |
| |
|
|||||||||||||| ||||||||||||| || |||||| ||||| ||| || ||||| | || |||||||| |||||||| ||| ||| |
|
|
| T |
17645561 |
caaatgacaagtgtgttcatgcatgtaaggcaaactttggcttgattc------------gagcatgagctagaattcacaacacaccacaggagtagaa |
17645648 |
T |
|
| Q |
237 |
caacaaaaagcaaaagaggaagagagccttgctc--aagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagacccaattcgtgagag |
334 |
Q |
| |
|
||||||||| ||| ||| | ||| |||| || ||||| |||||||| |||||| ||||||| |||||| || |||||| || |||||| || |||| |
|
|
| T |
17645649 |
caacaaaaaacaagagaaaagaagacccttaatcaaaagaggaaagtgattctcataaagagtttccttgtgagataaatagtgagccaatttgtaagag |
17645748 |
T |
|
| Q |
335 |
tgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaagttgtattcccattatcattatagtggaagttttaagaggcccaaggg |
434 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||| || |||| |||||||| |||||||||||||||||||| ||||||| || |||| | |
|
|
| T |
17645749 |
tgttccttacaaattgagagatacgttgtagtgagatccacctaggggt--tgttgtattgtcattatcattatagtggaag-tttaagacgctcaagag |
17645845 |
T |
|
| Q |
435 |
tcccatggttttttcctttctcacattgagaaggatttccacactaaaatt |
485 |
Q |
| |
|
|||| |||||||| ||| | | |||||||||| ||||||| |||||||| |
|
|
| T |
17645846 |
tcccgtggttttt---ttttttatattgagaaggttttccacgctaaaatt |
17645893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 530
Target Start/End: Complemental strand, 18556523 - 18556349
Alignment:
| Q |
359 |
attgtagtgagatccacgtaagggtgaagttgt---attcccattatcattatagtggaagttttaagaggcccaagggtcccatggtttttt-cctttc |
454 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||| |||| |||||||||||||||||| ||||||| | |||||||| ||||||||| |||||| |
|
|
| T |
18556523 |
attgtaatgagatccacctaagggtgaagttgttgtattctcattgtcattatagtggaagttt-aagaggctcgagggtcccgtggttttttgcctttc |
18556425 |
T |
|
| Q |
455 |
tcacattgagaaggatttccacactaaaattctttgtgtcattaagcttatatttcgcgtttccgctagtgcctat |
530 |
Q |
| |
|
||| |||||||||| ||||||| |||||||| | |||||||||| ||||||||||| |||||| ||| || ||||| |
|
|
| T |
18556424 |
tcagattgagaaggttttccacgctaaaattttatgtgtcattacgcttatatttcacgtttctgctggtacctat |
18556349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 485
Target Start/End: Original strand, 50603225 - 50603320
Alignment:
| Q |
388 |
ttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaatt |
485 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||||||||||| | |||| || |||||||||| || ||||||||||||||| ||||||| |||||||| |
|
|
| T |
50603225 |
ttgtattcccattattattatagtgga-gatttaagaggcctacgggttccgtggttttttc-ttactcacattgagaaggttttccacgctaaaatt |
50603320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 21 - 530
Target Start/End: Complemental strand, 25857685 - 25857175
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgc----atgtattgcaagggaca |
116 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| |||||||||||||||| || |||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
25857685 |
tgcatggtgtacacatggtgtagtgtatgagtgacatgtgttgtggtgcatgca-----agggacatttggtgtggtgcgtgcatgcattgcaagggaca |
25857591 |
T |
|
| Q |
117 |
cttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcac |
216 |
Q |
| |
|
|||| ||||| ||| |||| |||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||| ||||||||||| |
|
|
| T |
25857590 |
cttggtgttt-gcatgaaaggcaaatgacaaatgtcttcatgcatgtaaggcaactttggcttgcttctcctataaataggaccatgagcaagcattcac |
25857492 |
T |
|
| Q |
217 |
aatacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatag |
316 |
Q |
| |
|
|| ||||||||| ||| |||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
25857491 |
aacacaccacaatagaagaacaacaaagagcaagagagaaagagagccttgctcaagagaaaagtcatcctcatagagagttttcttgtgagagaaatag |
25857392 |
T |
|
| Q |
317 |
agacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtgg |
413 |
Q |
| |
|
|| |||||| ||||||||||| |||||||||| ||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
25857391 |
tgagccaatttgtgagagtgttccttacaaattaagagatatattgtagtgagatccacctaaaggtgaagttgttgtattcccattatcattatagtgg |
25857292 |
T |
|
| Q |
414 |
aagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaattctttgtgtcattaagcttatatttcgcg |
513 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||| || |
|
|
| T |
25857291 |
aagttttaagaggcccaagggtcccgtggtttttccttttctcacattgagaaggttttccacgctaaaattctctgtgtcattacgcttatatttcacg |
25857192 |
T |
|
| Q |
514 |
tttccgctagtgcctat |
530 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
25857191 |
tttccgctagtgcctat |
25857175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 113 - 530
Target Start/End: Complemental strand, 4836041 - 4835619
Alignment:
| Q |
113 |
gacacttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcat |
212 |
Q |
| |
|
|||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||| ||||||| |
|
|
| T |
4836041 |
gacacttggtgttttgcatgaaaggcaaatgacaagtgtcttcatgcatgtaaggcaactttggcttgcttctcctataaataggaccatgagcaagcat |
4835942 |
T |
|
| Q |
213 |
tcacaatacaccacaagagacgaacaacaaaa-agcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggaga |
311 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
4835941 |
tcacaacacaccacaagagaagaacaacaaaagagcaagagagaaagagagccttgctcaagagaaaagtcatcctcatagagagttttcttgtgagaga |
4835842 |
T |
|
| Q |
312 |
aatagagacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaagttgt---attcccattatcattat |
408 |
Q |
| |
|
||||| || |||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
4835841 |
aatagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgcattcccattatcattat |
4835742 |
T |
|
| Q |
409 |
agtggaagttttaagaggcccaagggtcccatggtttttt-cctttctcacattgagaaggatttccacactaaaattctttgtgtcattaagcttatat |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||| |||||||||| | |||||| |
|
|
| T |
4835741 |
agtggaagttttaagaggcccaagggtcccgtggttttttccctttctcacattgagaaggttttccacgctaaaattctctgtgtcattacgtttatat |
4835642 |
T |
|
| Q |
508 |
ttcgcgtttccgctagtgcctat |
530 |
Q |
| |
|
||| ||||||| ||||||||||| |
|
|
| T |
4835641 |
ttcacgtttccactagtgcctat |
4835619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 18 - 530
Target Start/End: Complemental strand, 4843204 - 4842692
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacac |
117 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
4843204 |
aggtgcattgtgtacacatggtgtagtgtatgagtaacacatggtgtaatgcatg-------agagacacttggtgtggtgcatgcatagcaagggacac |
4843112 |
T |
|
| Q |
118 |
ttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcaca |
217 |
Q |
| |
|
||| ||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| ||||| |||||||||| | |
|
|
| T |
4843111 |
ttggtgttttgcatgaaaggcaaatgacaagtgtcttcatgcatgtaaggcaactttgacttgcttctcctataaataggaccatgaacaagcattcaaa |
4843012 |
T |
|
| Q |
218 |
atacaccacaagagacgaacaacaaaa-agcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatag |
316 |
Q |
| |
|
| ||||||||||| | ||||||||||| ||||| |||| |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| |
|
|
| T |
4843011 |
acacaccacaagaaaagaacaacaaaagagcaagagagaaagagagccttgctcaagagaaaagtcatcctcataaagagttttcttgtgagagaaatat |
4842912 |
T |
|
| Q |
317 |
agacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtgg |
413 |
Q |
| |
|
|| |||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
4842911 |
tgagccaatttgtgagagtgttccttaaaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcctattatcattatagtgg |
4842812 |
T |
|
| Q |
414 |
aagttttaagaggcccaagggtcccatggtttttt-cctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttc |
510 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||||| |
|
|
| T |
4842811 |
aagttttaagaggcccaagggtcctgtggttttttccctttctcacattgagaaggttttccacgctaaaattctctttgtgtcattacacttatatttc |
4842712 |
T |
|
| Q |
511 |
gcgtttccgctagtgcctat |
530 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
4842711 |
acgtttccgctagtgcctat |
4842692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 22 - 530
Target Start/End: Complemental strand, 27341486 - 27340980
Alignment:
| Q |
22 |
gcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttga |
121 |
Q |
| |
|
||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| |
|
|
| T |
27341486 |
gcatggtgtacacatggtgtagtatatgagttac-catgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgcattacaaggggcacttgg |
27341388 |
T |
|
| Q |
122 |
tgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaatac |
221 |
Q |
| |
|
|||||||| |||| ||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| |||| ||||||||||||| || |
|
|
| T |
27341387 |
tgttttgcttgaaaggaaaatggcaagtgtcttcatgcatgtaaggcaactttgacttgcttctcctataaatgggaccatgggcaagcattcacaacac |
27341288 |
T |
|
| Q |
222 |
accacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctc--aagagaaaagtgatcctcatagagagttttcttgtgggagaaatagaga |
319 |
Q |
| |
|
||||||| ||| ||||||| |||||||| |||| ||||||| | ||||| ||||||||||| ||||||||| ||||||| ||||| ||||||||| || |
|
|
| T |
27341287 |
accacaa-agaagaacaac-aaaagcaagagagaaagagagtcatgctcaaaagagaaaagttatcctcatatagagtttctttgtgagagaaatagtga |
27341190 |
T |
|
| Q |
320 |
cccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtggaag |
416 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||| |||||||||||||||| ||| | |||| ||||||| ||||||||||| |||| |||| |
|
|
| T |
27341189 |
gccaacctgtgagagtgttccttacaaattgagagatatattgtagtgagatccatctaa--gagaagttattgtatttccattatcattgtagtagaag |
27341092 |
T |
|
| Q |
417 |
ttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaattctttgtgtcattaagcttatatttcgcgttt |
516 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||||| |||||||||||| ||||||| |||||||||| |||||||||| ||||||||||| |||| |
|
|
| T |
27341091 |
-tttaagaggtacaagggtcccgtgg-tttttcctttcttacattgagaaggttttccacgctaaaattctctgtgtcattacgcttatatttcatgttt |
27340994 |
T |
|
| Q |
517 |
ccgctagtgcctat |
530 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
27340993 |
ccgctagtgcctat |
27340980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 530
Target Start/End: Complemental strand, 24379816 - 24379323
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
24379816 |
tgcatggtgtacacatggtgtagtgtatgagtgacatatgttgtggtgcatgca-----agagacactttgtgtggtgcatgcattgcaagggacacttg |
24379722 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaata |
220 |
Q |
| |
|
||||||||| || | ||| ||||||||||||||||| |||||||| |||| |||| | ||||||||| ||||| ||||||||||||| | |
|
|
| T |
24379721 |
gtgttttgcataaa--------ggcaaatgtcttcatgcatgtaaggcaactttggcttccttcggctataaataggaccatgagcaagcattcacaaca |
24379630 |
T |
|
| Q |
221 |
caccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagac |
320 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||| |||||||| || |
|
|
| T |
24379629 |
caccacaagagaagaacaacaaa--------gagaaagagagtcttgctcgagagaaaagtcatcctcatagagagttttcttgtgaaagaaatagtgag |
24379538 |
T |
|
| Q |
321 |
ccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtggaagt |
417 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
24379537 |
ccaatttatgagagtgttccttacaaattgagagatatattgtagggagatccacctaagggtgaagttgttgtattcctattatcattatagtggaagt |
24379438 |
T |
|
| Q |
418 |
tttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttcgcgtt |
515 |
Q |
| |
|
|||||||||||||| | |||| |||||||| |||||||||||||||||||| ||||||| |||||| ||| | |||||||| | |||||||| |||| |
|
|
| T |
24379437 |
tttaagaggcccaaagatcccgtggtttttccctttctcacattgagaaggttttccacgttaaaattatctctatgtcattacgtttatattttacgtt |
24379338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 31 - 450
Target Start/End: Original strand, 4603333 - 4603748
Alignment:
| Q |
31 |
acacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttgatgttttgca |
130 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||| || ||||| |||||| ||||||| ||||||||||||||||| |||| |||| |
|
|
| T |
4603333 |
acacatggtgtagtgtatgagtgacacatgtgttggtgcatgca-----agggacacttggtgttgtgcatgcattgcaagggacacttggtgttgtgca |
4603427 |
T |
|
| Q |
131 |
cgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaatacaccacaaga |
230 |
Q |
| |
|
|||| |||||||||| ||||||| ||||||||| | |||||| | |||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
4603428 |
tgaaaggcaaatgacaaatgtcttcgtgcatgtaaggaaactttggtttgcttctcctataaataggatcatgaacaagcattcacaacacaccacaaga |
4603527 |
T |
|
| Q |
231 |
gacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagacccaattcgtg |
330 |
Q |
| |
|
| ||||||| |||||||| | || ||||||| |||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||| |||||| || |
|
|
| T |
4603528 |
taagaacaacgaaaagcaagatagaaagagagtcttgctcaagagaaaagttatcttcataaagagttttcttgtgagagaaatagagagccaatt--tg |
4603625 |
T |
|
| Q |
331 |
agagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaa---gttgtattcccattatcattatagtggaagttttaagaggc |
427 |
Q |
| |
|
|||||| |||||||||||| ||||| ||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
4603626 |
taagtgttccttacaaattgaaagatatattgtagtgagatccacctaagggtaaagttgttgtatttccattatcattatagtggaaggtttaagaggc |
4603725 |
T |
|
| Q |
428 |
ccaagggtcccatggttttttcc |
450 |
Q |
| |
|
|||| |||||| ||||||||||| |
|
|
| T |
4603726 |
ccaaaggtcccgtggttttttcc |
4603748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 19 - 519
Target Start/End: Complemental strand, 38994600 - 38994115
Alignment:
| Q |
19 |
ggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacact |
118 |
Q |
| |
|
||||||| |||||||||| |||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
38994600 |
ggtgcatagtgtacacatgatgtagtgtatgagtaacacatgttgtggtgcatatattacaaaagacacatggtgtggtgcatgcattgcatgggacact |
38994501 |
T |
|
| Q |
119 |
tgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaa |
218 |
Q |
| |
|
|||||||||||| |||| |||||||||||| |||||||||| |||| ||||||| |||||||||||| |||||| || ||||| |||| | |||||| |
|
|
| T |
38994500 |
tgatgttttgcatgaaatgcaaatgacaagtttcttcatgcacgtaagacaactttggcttgcttctcctataaatatgaccatgagcaagtaatcacaa |
38994401 |
T |
|
| Q |
219 |
tacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagtttt-cttgtgggagaaataga |
317 |
Q |
| |
|
||||||||||||| |||||||||||| ||| |||| ||| ||| |||||||| |||||||| |||||||||||||||||| |||||| |||||||| |
|
|
| T |
38994400 |
cacaccacaagagaagaacaacaaaaaacaagagagaaagggagttttgctcaaaagaaaagtaatcctcatagagagttttccttgtgagagaaataat |
38994301 |
T |
|
| Q |
318 |
gacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaagttgtattcccattatcattatagtggaagt |
417 |
Q |
| |
|
|| |||||| |||| |||||| |||||||||||||||||| ||||||||||||||||| ||||| |||||||||| || |||| |
|
|
| T |
38994300 |
gagccaatttgtgatagtgttccttacaaattgagagatatattgtagtgagatccacctaagg------------------tatcattataatgaaagt |
38994219 |
T |
|
| Q |
418 |
tttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttcgcgtt |
515 |
Q |
| |
|
|||||||||| | |||||||| |||||||| |||||||| ||||||||||| ||||||| |||||| |||||||||||||| ||||||||| ||| |
|
|
| T |
38994218 |
tttaagaggctcgagggtcccgtggtttttccctttctcgcattgagaaggttttccacgttaaaattctctttgtgtcattacatttatatttcatgtt |
38994119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 270 - 509
Target Start/End: Complemental strand, 13465264 - 13465024
Alignment:
| Q |
270 |
caagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgag |
369 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||| || |||||| || |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13465264 |
caagagaaaagtgatcctcatagaatgttttcttgtg--agaaatagtgaaccaatttgtaagagtgttccttacaaattgagagatacattgtagtgag |
13465167 |
T |
|
| Q |
370 |
atccacgtaagggtgaa---gttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaa |
466 |
Q |
| |
|
|||||| | |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
13465166 |
atccacctgagggtgaacttgttgtattcccattatcattatagtggatgttttaagaggcccaagggtcctgtggtttttccctttctcacattgagaa |
13465067 |
T |
|
| Q |
467 |
ggatttccacactaaaattctttgtgtcattaagcttatattt |
509 |
Q |
| |
|
|| ||||||| |||||||| |||||||||||| || ||||||| |
|
|
| T |
13465066 |
ggttttccacgctaaaattttttgtgtcattacgcatatattt |
13465024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 259 - 510
Target Start/End: Original strand, 17845727 - 17845986
Alignment:
| Q |
259 |
agagccttgctcaa--gagaaaagtgatcctcatagagagttttcttgtgggagaaatagagacccaattcg----tgagagtgtttcttacaaattgag |
352 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||| ||||||| |||||| |||||||| || ||||| |||||||||| ||||||||||||| |
|
|
| T |
17845727 |
agagccttgctcaaaagagaaaagtgatcctaataaagagtttccttgtgagagaaatattgagtcaatttaattatgagagtgttccttacaaattgag |
17845826 |
T |
|
| Q |
353 |
agatacattgtagtgagatccacgtaagggtgaa---gttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttc |
449 |
Q |
| |
|
||||| ||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||| |||| ||||| ||| |||||| |
|
|
| T |
17845827 |
agatatattgtagtgagattcacctaagggtgaagttgttgtatttccattatcattatagtggaag-tttaagaggtccaaaggtcctgtgg-tttttc |
17845924 |
T |
|
| Q |
450 |
ctttctcacattgagaaggatttccacactaaaattct-ttgtgtcattaagcttatatttc |
510 |
Q |
| |
|
||| ||||||||| ||||| ||||||| |||||||||| ||||||| ||| ||||||||||| |
|
|
| T |
17845925 |
cttcctcacattgggaaggttttccactctaaaattctcttgtgtctttacgcttatatttc |
17845986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 13466187 - 13465994
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacac |
117 |
Q |
| |
|
||||| ||| |||||| |||||||| ||||||| ||||||||||||||| | |||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
13466187 |
aggtgtatggtgtacatatggtgtaatgtatgagtaacacatgttgtggtgtacgcattgcaagtgacacatggtgtggtgcatgcattgcaagggacac |
13466088 |
T |
|
| Q |
118 |
ttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagca |
211 |
Q |
| |
|
| ||||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| |||||| ||||||||| ||||| |||||| |
|
|
| T |
13466087 |
taagtgttttgcatgaaagacaaatgacaagtgtcttcatgcatgtaagataactttggcttgtttctcctataaataggaccatgagcaagca |
13465994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 17845515 - 17845725
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacac |
117 |
Q |
| |
|
||||||||| |||||||||||| | |||||||| ||||||||||| |||| | ||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
17845515 |
aggtgcatggtgtacacatggtatggtgtatgagtaacacatgttgtagtgctt----tgcaagagacatgtggtgtggtgcatgcattgcaagggacat |
17845610 |
T |
|
| Q |
118 |
ttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcaca |
217 |
Q |
| |
|
||| ||||||||| |||| ||||||||||||||||||||| |||||| ||| |||| ||||||| ||| ||||||||| |||| |||||||||| | |
|
|
| T |
17845611 |
ttggtgttttgcatgaaaggcaaatgacaagtgtcttcatgtatgtaaggcatctttaacttgcttgtcctataaataggaccatggacaagcattcata |
17845710 |
T |
|
| Q |
218 |
atacaccacaagaga |
232 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
17845711 |
acacaccacaagaga |
17845725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 13465305 - 13465262
Alignment:
| Q |
206 |
caagcattcacaatacaccacaagagacgaacaacaaaaagcaa |
249 |
Q |
| |
|
||||||||||||| ||| ||||||||| |||||||||||||||| |
|
|
| T |
13465305 |
caagcattcacaacacaacacaagagaagaacaacaaaaagcaa |
13465262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 38994647 - 38994594
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcat |
71 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
38994647 |
aggtgcatgaagtacacatgaagtagtgtatgagtaacacatgttgtggtgcat |
38994594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 4836099 - 4836067
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatga |
50 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
4836099 |
aggtgcatggtgtacacatggtgtagtgtatga |
4836067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0479 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: scaffold0479
Description:
Target: scaffold0479; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 21 - 530
Target Start/End: Original strand, 2385 - 2892
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
2385 |
tgcatggtgtacacatggtgtagtgtatgagtaacacatggtgtaatgcatg-------agagacacttggtgtggtgcatgcattgcaagggacacttg |
2477 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaata |
220 |
Q |
| |
|
||| ||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||| |||||||||||||||| || | |
|
|
| T |
2478 |
gtgtcttgcatgaaaggcaaatgacaagtgtcttcatgcatgtaaggcaactttggcttgctcctcctataaataggaccatgatcaagcattcaaaaca |
2577 |
T |
|
| Q |
221 |
caccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagac |
320 |
Q |
| |
|
|||||||||||| |||||||||| ||||| ||| |||||||||||||||| ||| ||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
2578 |
caccacaagagaagaacaacaaagagcaagagaaaaagagagccttgctcatgag-aaagtcatcctcatagagagttttcttgtgagagaaatagtgag |
2676 |
T |
|
| Q |
321 |
ccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaa---gttgtattcccattatcattatagtggaagt |
417 |
Q |
| |
|
|||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2677 |
ccaatttgtgagagcgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattatagtggaagt |
2776 |
T |
|
| Q |
418 |
tttaagaggcccaagggtcccatggtttttt-cctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttcgcgt |
514 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||| ||| |
|
|
| T |
2777 |
tttaagaggcccaagggtcccgtggttttttccctttctcacattgagaaggttttccacgctaaaattctctttgtgtcattacgcttatatttcacgt |
2876 |
T |
|
| Q |
515 |
ttccgctagtgcctat |
530 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
2877 |
ttccgctagtgtctat |
2892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 21 - 530
Target Start/End: Complemental strand, 342772 - 342261
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgc----atgtattgcaagggaca |
116 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| |||||||||||||||| || |||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
342772 |
tgcatggtgtacacatggtgtagtgtatgagtgacatttgttgtggtgcatgca-----agggacatttggtgtggtgcgtgcatgcattgcaagggaca |
342678 |
T |
|
| Q |
117 |
cttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcac |
216 |
Q |
| |
|
|||| ||||| ||| |||| |||||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||| ||||| ||||||||||| |
|
|
| T |
342677 |
cttggtgttt-gcatgaaaggcaaatgacaaatgtcttcatgcatgtaagtcaactttggcttgcttctcctataaataggaccatgagcaagcattcac |
342579 |
T |
|
| Q |
217 |
aatacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatag |
316 |
Q |
| |
|
|| ||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
342578 |
aacacaccacaagagaagaacaacaaagagcaagagagaaagagagccttgctcaagagaaaagtcatcctcatagagagttttcttgtgagagaaatag |
342479 |
T |
|
| Q |
317 |
agacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaa---gttgtattcccattatcattatagtgg |
413 |
Q |
| |
|
|| |||||| ||||||||||| |||||||||||||||||| |||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
342478 |
tgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtcagatacacctaagggtgaaattgttgtattcccattatcattatagtgg |
342379 |
T |
|
| Q |
414 |
aagttttaagaggcccaagggtcccatggttttttcc-tttctcacattgagaaggatttccacactaaaattctttgtgtcattaagcttatatttcgc |
512 |
Q |
| |
|
|||||||||||||||||||| |||| |||||| |||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||| ||||||||||| | |
|
|
| T |
342378 |
aagttttaagaggcccaaggatcccgtggtttcttccatttctcatattgagaaggtttttcacgctaaaattctttgtgtcattacgcttatatttcac |
342279 |
T |
|
| Q |
513 |
gtttccgctagtgcctat |
530 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
342278 |
gtttctgctagtgcctat |
342261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 21 - 530
Target Start/End: Original strand, 41481266 - 41481771
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||| ||||||| ||||||||| |
|
|
| T |
41481266 |
tgcatggtgtacacatggtgtagtgtatgagtaacacatgttgtaatgcatg-------agagacacttggtgtggtgcatgcattgcaatggacacttg |
41481358 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaata |
220 |
Q |
| |
|
||||| ||| |||| |||| |||| ||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||| |||||||||| || | |
|
|
| T |
41481359 |
gtgttt-gcatgaaaggtaaattacaaatgtcttcatgcatgtaaggcaactttggcttgcttctcctataaataggaccatgagcaagcattcataaca |
41481457 |
T |
|
| Q |
221 |
caccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagac |
320 |
Q |
| |
|
|||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
41481458 |
caccacaagagaagaacaacaaagagcaagaga--aagagagccttgctcaagagaaaagtcatcctcatagagagttttcttgtgagagaaatagtgag |
41481555 |
T |
|
| Q |
321 |
ccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaa---gttgtattcccattatcattatagtggaagt |
417 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
41481556 |
ccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattatagtggaagt |
41481655 |
T |
|
| Q |
418 |
tttaagaggcccaagggtcccatggtttttt-cctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttcgcgt |
514 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| ||| |
|
|
| T |
41481656 |
tttaagaggcccaagggtcccgtggttttttccctttctcatattgagaaggttttccacgctaaaattctctttgtgtcattacgtttatatttcacgt |
41481755 |
T |
|
| Q |
515 |
ttccgctagtgcctat |
530 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
41481756 |
ttccgctagtgtctat |
41481771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 21 - 530
Target Start/End: Original strand, 36167265 - 36167769
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||| | ||||||||||||||| |
|
|
| T |
36167265 |
tgcatggtgtacacatggtgtagtgtatgagtaacacatgttgtaatgcatg-------agagacacttggtgtggtgcatgcaatgcaagggacacttg |
36167357 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaata |
220 |
Q |
| |
|
||||| ||| |||| |||| |||| ||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||| ||||||||||||| | |
|
|
| T |
36167358 |
gtgttt-gcatgaaaggaaaataacaaatgtcttcatgcatgtaaggcaactttggcttgcttctcctataaataggaccatgagcaagcattcacaaca |
36167456 |
T |
|
| Q |
221 |
caccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagac |
320 |
Q |
| |
|
|||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
36167457 |
caccacaagagaagaacaacaaagagcaagaga--aagagagccttgctcaagagaaaagtcatcctcatagagagttttcttgtgagagaaatagtgag |
36167554 |
T |
|
| Q |
321 |
ccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaa---gttgtattcccattatcattatagtggaagt |
417 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
36167555 |
ccaatttgtgagagtgttccttacaaattgagagatatattatagtgagatccacctaagggtgaagttgttgtattcccattatcattatagtggaagt |
36167654 |
T |
|
| Q |
418 |
tttaagaggcccaagggtcccatggtttttt-cctttctcacattgagaaggatttccacactaaaat--tctttgtgtcattaagcttatatttcgcgt |
514 |
Q |
| |
|
|||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| ||| |
|
|
| T |
36167655 |
tttaagaggcccaagggt-ccgtggttttttccctttctcatattgagaaggttttccacgctaaaattctctttgtgtcattacgtttatatttcacgt |
36167753 |
T |
|
| Q |
515 |
ttccgctagtgcctat |
530 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
36167754 |
ttccgctagtgcctat |
36167769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 21 - 530
Target Start/End: Complemental strand, 18951674 - 18951168
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||||||||||||| | || ||||| |||||||||||||| ||||||||||||| ||| |
|
|
| T |
18951674 |
tgcatggtgtacacatggtgtagtgtatgagtgacacatgttgtggtgcatgta-----agggacacttggtgtggtgcatgcattgcaagggacaattg |
18951580 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcacaata |
220 |
Q |
| |
|
|| |||||| |||| ||||||||||||| |||||||||||| ||| |||| ||||| |||||| |||||| || ||| | ||||||||||| | | |
|
|
| T |
18951579 |
gtgatttgcatgaaaggaaaatgacaagtgttctcatgcatgtaaggcagctttggcttgtttctcctataaataagaccataagcaagcattcacgaca |
18951480 |
T |
|
| Q |
221 |
caccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaatagagac |
320 |
Q |
| |
|
||||||||||| |||||||||||| ||| |||| || |||| |||| | ||||||||||| |||||| ||||||||||||| || | |||||| || |
|
|
| T |
18951479 |
aaccacaagagaagaacaacaaaaatcaagagagaaaaagagtcttgtttaagagaaaagtcatcctcgtagagagttttctcttgagggaaataatgag |
18951380 |
T |
|
| Q |
321 |
ccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtggaagt |
417 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| ||| |||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18951379 |
ccaatttgtgagagtgttccttacaaattgagagataaattatagtgagatcaacctaagggtgaagttgttgtattcccattatcattatagtggaagt |
18951280 |
T |
|
| Q |
418 |
tttaagaggcccaagggtcccatggtttttt-cctttctcacattgagaaggatttccacactaaaattctttgtgtcattaagcttatatttcgcgttt |
516 |
Q |
| |
|
||||||| |||||| |||| | ||||||||| |||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||| |||| |
|
|
| T |
18951279 |
tttaagaagcccaaaggtctcgtggttttttccctttctcacattgagaaggttttccatgctaaaattc--tgtgtcattacgcttatatttcatgttt |
18951182 |
T |
|
| Q |
517 |
ccgctagtgcctat |
530 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
18951181 |
ccgctagtgcctat |
18951168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 18965900 - 18966078
Alignment:
| Q |
21 |
tgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacacttg |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||| ||||||||||| || ||||| |||||||||||||| ||||||||||||| ||| |
|
|
| T |
18965900 |
tgcatggtgtacacatggtgtagtgtatgagtgacacatgttttggtgcatgca-----agggacacttggtgtggtgcatgcattgcaagggacagttg |
18965994 |
T |
|
| Q |
121 |
atgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatga |
204 |
Q |
| |
|
|| |||||| |||| ||||||||| ||||||||||||||||| ||| |||| |||| ||||||| |||||| || ||||| |
|
|
| T |
18965995 |
gtgatttgcatgaaaggaaaatgacaaatgtcttcatgcatgtaaggcagctttggcttccttctcctataaataagaccatga |
18966078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 530
Target Start/End: Complemental strand, 42683392 - 42682881
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacac |
117 |
Q |
| |
|
||||||||| |||||||||| |||||| ||||| |||||||| |||||||| |||| |||||||| | ||||||| |||||| ||||||||| |||| |
|
|
| T |
42683392 |
aggtgcatggtgtacacatgatgtagtatatgagtaacacatgtcatggtgcatacattacaagagacgcgtggtgtgttgcatgcattgcaagg-acac |
42683294 |
T |
|
| Q |
118 |
ttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgcttctccggtaaataggatcatgatcaagcattcaca |
217 |
Q |
| |
|
|| ||||||| | |||| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| ||||| |||||||||||| |
|
|
| T |
42683293 |
ttcgtgttttgtatgaaagacaaatgacaagtgtcttcatgcatgtaagacaactttgacttgcttctcctataaataggaccatgagcaagcattcaca |
42683194 |
T |
|
| Q |
218 |
atacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtgatcctcatagagagttttcttgtgggagaaataga |
317 |
Q |
| |
|
| |||||||| || | |||||||||||||||| |||| |||||| |||||||||||||||| | ||||||| | |||||||||||||| ||||||||| |
|
|
| T |
42683193 |
acacaccacaggataagaacaacaaaaagcaagagagagagagagtcttgctcaagagaaaactcatcctcacaaagagttttcttgtgagagaaatagt |
42683094 |
T |
|
| Q |
318 |
gacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggtgaag---ttgtattcccattatcattatagtgga |
414 |
Q |
| |
|
|| |||||| || |||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
42683093 |
gagccaatttgtaagagtgttccttacaaattgagagatatattgtagtgagatgcacctaagggtgaagttgttgtattcccattatcattatagtgga |
42682994 |
T |
|
| Q |
415 |
agttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaattctttgtgtcattaagcttatatttcgcgt |
514 |
Q |
| |
|
|||||||||||| ||||||||||| | | ||||||||||||||||||||||||| ||||||| || |||| | |||||||||| | |||||||| ||| |
|
|
| T |
42682993 |
agttttaagaggtccaagggtcccgt-gatttttcctttctcacattgagaaggttttccacgctgaaat--tatgtgtcattacgtttatattttacgt |
42682897 |
T |
|
| Q |
515 |
ttccgctagtgcctat |
530 |
Q |
| |
|
|| |||||||| |||| |
|
|
| T |
42682896 |
tttcgctagtgtctat |
42682881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 76 - 530
Target Start/End: Complemental strand, 9757706 - 9757256
Alignment:
| Q |
76 |
tgcaagagacacatggtgtggtgcatgtattgcaagggacacttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaactttt |
175 |
Q |
| |
|
|||||| ||| | |||||||||||||| ||||||||||||||||| ||||||||| |||| |||||||||| ||||||||||||||| | |||||||| |
|
|
| T |
9757706 |
tgcaagggacccttggtgtggtgcatgcattgcaagggacacttggtgttttgcatgaaaggcaaatgacaaatgtcttcatgcatgtgaggcaactttg |
9757607 |
T |
|
| Q |
176 |
gcttgcttctccggtaaataggatcatgatcaagcattcacaatacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagag |
275 |
Q |
| |
|
||| ||||||| ||||||||| ||||| |||||||||| || ||||||||||||| || |||| |||| |||||||||||||||||||| |
|
|
| T |
9757606 |
gctggcttctcttataaataggaccatgagcaagcattcaaaa-acaccacaagagaaga----------gcaagagagaaagagagccttgctcaagag |
9757518 |
T |
|
| Q |
276 |
aaaagtgatcctcatagagagttttcttgtgggagaaatagagacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccac |
375 |
Q |
| |
|
| |||| ||| ||||||||||||||||| || ||||||||| || |||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
9757517 |
agaagtcatcttcatagagagttttcttttgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagagatatattatagtgagatccac |
9757418 |
T |
|
| Q |
376 |
gtaagggtgaag---ttgtattcccattatcattatagtggaag--ttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggat |
470 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| | |
|
|
| T |
9757417 |
ctaagggtgaagttgttgtattcccattatcattatagtggaagttttttaagaggcccaagggtcccgtggtttttccctttctcacattgagaaggtt |
9757318 |
T |
|
| Q |
471 |
ttccacactaaaat--tctttgtgtcattaagcttatatttcgcgtttccgctagtgcctat |
530 |
Q |
| |
|
|||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
9757317 |
ttccacgctaaaattctctttgtgtcattacgcttatatttcacgtttccgctagtgcctat |
9757256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 84 - 525
Target Start/End: Complemental strand, 37287379 - 37286932
Alignment:
| Q |
84 |
acacatggtgtggtgcatgtattgcaagggacacttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgctt |
183 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
37287379 |
acacatgttgtggtgcatgcatttcaagggacacttagtgttttgcatgaaaggcaaatgacaagtgtcttcatgcatgtaagacaactttggcttgctt |
37287280 |
T |
|
| Q |
184 |
ctccggtaaataggatcatgatcaagcattcacaatacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctc--aagagaaaagt |
281 |
Q |
| |
|
|||| ||||||||| ||||| |||||||||||| ||||||||||| | ||| |||||||||||| |||| |||| || ||||||| || | |||| | |
|
|
| T |
37287279 |
ctcctataaataggaccatgagtaagcattcacaacacaccacaagaaaagaataacaaaaagcaagagagaaagaaagtcttgctcaaaacataaaatt |
37287180 |
T |
|
| Q |
282 |
gatcctcatagagagttttcttgtgggagaaatagagacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagg |
381 |
Q |
| |
|
||| ||||||||| ||| ||| || |||||| || || || ||| ||| | |||| |||||||||||||||||| ||||||||||| |||| ||||| |
|
|
| T |
37287179 |
gatgttcatagagaatttccttctgagagaaacagtgagccgatttgtgttaatgttccttacaaattgagagatatattgtagtgagctccatctaagg |
37287080 |
T |
|
| Q |
382 |
gtgaa----gttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccaca |
477 |
Q |
| |
|
||||| ||||||||| ||||| ||||||||||||| ||||||| || ||||||||| | | |||||||||| |||||||||||||| |||||| |
|
|
| T |
37287079 |
gtgaaagttgttgtattcttattattattatagtggaag-tttaagatgcttaagggtcccgt-gatttttcctttttcacattgagaaggttttccatg |
37286982 |
T |
|
| Q |
478 |
ctaaaa--ttctttgtgtcattaagcttatatttcgcgtttccgctagtg |
525 |
Q |
| |
|
|||||| |||||| |||||||| | ||||||||| |||||||||||||| |
|
|
| T |
37286981 |
ctaaaattttctttctgtcattacgtttatatttcacgtttccgctagtg |
37286932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 3346428 - 3346541
Alignment:
| Q |
83 |
gacacatggtgtggtgcatgtattgcaagggacacttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgct |
182 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||| ||||||| ||| || |
|
|
| T |
3346428 |
gacacatgttgtggtgcat--attgcaagggacacttgatgttttacatgaaagtcaaatgacaagtgtctttatgcatgtaagacaactttaacttact |
3346525 |
T |
|
| Q |
183 |
tctccggtaaatagga |
198 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
3346526 |
tctcctataaatagga |
3346541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 3346393 - 3346460
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacac |
87 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| ||||| |
|
|
| T |
3346393 |
aggtgcatgatgtacatatggtgtagtgtatgagtgacacatgttgtggtgcat--attgcaagggacac |
3346460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 37287415 - 37287346
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacac |
87 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| |
|
|
| T |
37287415 |
aggtgcatagtgtacacatggtgtagtgtatgagtaacacatgttgtggtgcatgcatttcaagggacac |
37287346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 84 - 530
Target Start/End: Original strand, 37037635 - 37038082
Alignment:
| Q |
84 |
acacatggtgtggtgcatgtattgcaagggacacttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgctt |
183 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||| ||||||| ||||||| |
|
|
| T |
37037635 |
acacatgttgtggtgcatgcattggaagggacacttggtgttttgcatgaaagacaaatgacaagtgttttcatgcatgtaagacaactttgtcttgctt |
37037734 |
T |
|
| Q |
184 |
ctccggtaaataggatcatgatcaagcattcacaatacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaagagaaaagtga |
283 |
Q |
| |
|
|||| ||||||||| ||||| ||||||||||||| ||||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
37037735 |
ctcctataaataggaccatgagcaagcattcacaacacaccgcaagagaaaaacaacaaaaagcaagagagaaagagagccttgctcaagagaaaagtga |
37037834 |
T |
|
| Q |
284 |
tcctcatagagagttttcttgtgggagaaatagagacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacgtaagggt |
383 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || |||||| |||||||||||||||| |||||||||| | |||||| |||||||||| |||| || |
|
|
| T |
37037835 |
tcctcatagagagttttcttgtgagagaaatagtgagccaatttgtgagagtgtttcttataaattgagagtcagattgtaatgagatccacctaagagt |
37037934 |
T |
|
| Q |
384 |
gaa---gttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacacta |
480 |
Q |
| |
|
||| ||||||||| ||||||| |||||||| ||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||| | ||| |
|
|
| T |
37037935 |
gaagttgttgtattctcattatcgttatagtgaaag-tttaagaggcccaagggtcccgtgg-tttctcctttctcacattgagaaggttttcctcgcta |
37038032 |
T |
|
| Q |
481 |
aaattctttgtgtcattaagcttatatttcgcgtttccgctagtgcctat |
530 |
Q |
| |
|
||| ||| |||||| ||| || | ||||| |||| ||||||||||||| |
|
|
| T |
37038033 |
aaaatctatgtgtctttacgcaaagatttcaggttttcgctagtgcctat |
37038082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 37037599 - 37037675
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgt |
94 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| |||||| |
|
|
| T |
37037599 |
aggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgcattggaagggacacttggtgt |
37037675 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 178 - 521
Target Start/End: Original strand, 27641915 - 27642261
Alignment:
| Q |
178 |
ttgcttctccggtaaataggatcatgatcaagcattcacaatacaccacaagagacgaacaacaaaaagcaaaagaggaagagagccttgctcaa--gag |
275 |
Q |
| |
|
|||||||||| |||||| || ||| ||||||||||||||| ||||||||||||| ||||||||||| |||| |||| ||||||| ||||||||| ||| |
|
|
| T |
27641915 |
ttgcttctcctataaataagaccataatcaagcattcacaacacaccacaagagaagaacaacaaaa-gcaagagagaaagagagtcttgctcaaaagag |
27642013 |
T |
|
| Q |
276 |
aaaagtgatcctcatagagagttttcttgtgggagaaatagagacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccac |
375 |
Q |
| |
|
||||||||||||| || | ||||| ||| || ||||||||| | ||||| ||||||||||| ||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
27642014 |
aaaagtgatcctcgtaaaaagtttccttttgagagaaataggaagtcaatttgtgagagtgttccttacaaatagagagatatattgtagtgagatccac |
27642113 |
T |
|
| Q |
376 |
gtaagggtgaagttg---tattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggattt |
472 |
Q |
| |
|
||| | |||||||| |||||||||||| ||||||||||||| |||||||| ||| ||| ||| || |||||||||||||||||||||||||| ||| |
|
|
| T |
27642114 |
ttaaagatgaagttgttttattcccattattattatagtggaag-tttaagagacccgaggaccccgtgattttttcctttctcacattgagaaggtttt |
27642212 |
T |
|
| Q |
473 |
ccacactaaaattctttgtgtcattaagcttatatttcgcgtttccgct |
521 |
Q |
| |
|
||| | ||||||| |||| |||||| ||||||||||| |||||||||| |
|
|
| T |
27642213 |
acacgccaaaattccttgtatcattacgcttatatttcacgtttccgct |
27642261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 27641426 - 27641491
Alignment:
| Q |
54 |
acacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacactt |
119 |
Q |
| |
|
||||||||| ||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27641426 |
acacatgttatggtgcatgcaatccaagaaacacgtggtgtggtgcatgtattgcaagggacactt |
27641491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 361 - 528
Target Start/End: Original strand, 22981494 - 22981664
Alignment:
| Q |
361 |
tgtagtgagatccacgtaagggtgaagttg---tattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctca |
457 |
Q |
| |
|
|||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
22981494 |
tgtagtgaaatccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccgtggtttttccctttctca |
22981593 |
T |
|
| Q |
458 |
cattgagaaggatttccacactaaaattctttgtgtcattaagcttatatttcgcgtttccgctagtgcct |
528 |
Q |
| |
|
||||||||||| ||||||| |||||||||| |||||||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
22981594 |
cattgagaaggttttccacgctaaaattctctgtgtcattacgcttatttttcacgtttccgctagtgcct |
22981664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 361 - 528
Target Start/End: Complemental strand, 23806914 - 23806744
Alignment:
| Q |
361 |
tgtagtgagatccacgtaagggtgaagttgt---attcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctca |
457 |
Q |
| |
|
|||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
23806914 |
tgtagtgaaatccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccgtggtttttccctttctca |
23806815 |
T |
|
| Q |
458 |
cattgagaaggatttccacactaaaattctttgtgtcattaagcttatatttcgcgtttccgctagtgcct |
528 |
Q |
| |
|
||||||||||| ||||||| |||||||||| |||||||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
23806814 |
cattgagaaggttttccacgctaaaattctctgtgtcattacgcttatttttcacgtttccgctagtgcct |
23806744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 485
Target Start/End: Complemental strand, 31152105 - 31152009
Alignment:
| Q |
388 |
ttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgagaaggatttccacactaaaatt |
485 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||||||||||| | || |||| ||||||||| ||| ||||||||||||||| |||||||| ||||||| |
|
|
| T |
31152105 |
ttgtattcccattattattatagtgga-gatttaagaggcctacggatcccgtggtttttttcttactcacattgagaaggttttccacattaaaatt |
31152009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 91; Significance: 8e-44; HSPs: 2)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 271 - 485
Target Start/End: Complemental strand, 26795 - 26579
Alignment:
| Q |
271 |
aagagaaaagtgatcctcatag--agagttttcttgtgggagaaatagagacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtga |
368 |
Q |
| |
|
|||| ||||||||||| ||||| |||||||| ||||| || |||||| || |||||| ||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
26795 |
aagataaaagtgatccgcatagctagagtttttttgtgaga-aaatagtgagccaatttgtgagagtgttccttacaaattgagagataaattgtagtga |
26697 |
T |
|
| Q |
369 |
gatccacgtaagggt---gaagttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccatggttttttcctttctcacattgaga |
465 |
Q |
| |
|
||||||| ||||||| | |||||||||| | ||||||||| |||||||| ||||||||||||||||||||| | | ||||||||| |||||||||| | |
|
|
| T |
26696 |
gatccacctaagggtggagtagttgtattctcgttatcattagagtggaag-tttaagaggcccaagggtcccgtag-tttttccttactcacattgaaa |
26599 |
T |
|
| Q |
466 |
aggatttccacactaaaatt |
485 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
26598 |
aggttttccaccctaaaatt |
26579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 26963 - 26799
Alignment:
| Q |
18 |
aggtgcatgatgtacacatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgcatgtattgcaagggacac |
117 |
Q |
| |
|
||||| ||| |||||| || ||||||||||||| |||| |||| || |||||| ||||||||||| |||||||||||||||||| |||||| ||||| |
|
|
| T |
26963 |
aggtgtatggtgtacaaatagtgtagtgtatgagtaacacgtgttatgatgcatgtattgcaagagatacatggtgtggtgcatgtgttgcaactgacac |
26864 |
T |
|
| Q |
118 |
ttgatgttttgcacgaaaaccaaatgacaagtgtcttcatgcatgtaaagcaacttttgcttgct |
182 |
Q |
| |
|
||| ||||||||| |||| |||| |||||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
26863 |
ttggtgttttgcatgaaaggaaaataacaagtgtcttcatgcatgtgaggcaactttggcttgct |
26799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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