View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1646_low_2 (Length: 400)
Name: NF1646_low_2
Description: NF1646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1646_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 10 - 384
Target Start/End: Original strand, 6351924 - 6352297
Alignment:
| Q |
10 |
aagaatatacaaaggtgtagctaaaatgtgatggctcaggagtagggctccgtaattttgtgtgaattacttcaaataatttagaatgaatagtaatgga |
109 |
Q |
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| T |
6351924 |
aagaatatacaaaggtgtaactaaaatgtgatggctcaggagtagggctccgtaattttgtgtgaattacttcaaataatttagaatgaatagtaatgga |
6352023 |
T |
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| Q |
110 |
aagtggagtatgtaatcgatgtgatttaccaacacagcaagaattacaaaaaccataaagttctttactagcaattggtatattacagatggaaattaca |
209 |
Q |
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| T |
6352024 |
aagtggagtatgtaatcgatgtgatttaccaacacagcaagaattacaaaaaccataaagttctttactagcaattggtatattacagatggaaattaca |
6352123 |
T |
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| Q |
210 |
tttttgacaaattgaccattagcatggcctagctagcataccaaatggatttacttgataccaaagtagaatcatatgttgcattttattacaaatgaca |
309 |
Q |
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| T |
6352124 |
tttttgac-aattgaccattagcatggcctagctagcataccaaatggatttacttgataccaaagtagaatcatagtttgcattttattacaaatgaca |
6352222 |
T |
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| Q |
310 |
gaattattatttgacgtaacgcctaaagtataaggagatgaatgcactgagagcttagtcacatggcaggaagat |
384 |
Q |
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| T |
6352223 |
gaattattatttgacgtaacgcctaaagtataaggagatgaatgcagtgagagcttagtcacatggcaggaagat |
6352297 |
T |
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