View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16471_low_16 (Length: 485)
Name: NF16471_low_16
Description: NF16471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16471_low_16 |
 |  |
|
| [»] scaffold0136 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 14 - 471
Target Start/End: Original strand, 31171318 - 31171776
Alignment:
| Q |
14 |
gaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaaccaaaatgatgaagtctacattatcacttgatgaattggggataattta |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31171318 |
gaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaaccaaaatgatgaagtctacattatcacttgatgaattgggggtaattta |
31171417 |
T |
 |
| Q |
114 |
cctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaagattgaagtttttaaagatgaaaat |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31171418 |
cctataataacaagtaggattcgattatgaaacgaaagagatggaaatcacattttgaatgaaacagatgtagaagattgaagtttctaaagatgaaaat |
31171517 |
T |
 |
| Q |
214 |
ggtatttaattgcaagnnnnnnnnnnnnnnnnnnnnnnnntatacccctaaatcattaagcagtaatctag-aataaaacactttctattgtccacatca |
312 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||| |
|
|
| T |
31171518 |
ggtatttaattgcaagaaaattaaaagataaaagaaaaaatatacccctaaatcattaagcagtaatctagaaaaaaaacactttctattgtccacgtca |
31171617 |
T |
 |
| Q |
313 |
taaaaatggatggaaagctgacatcaaatattaaaatagtgggagcttttgaattacaacaacataattttnnnnnnnnncaaaatatgaatggactaag |
412 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
31171618 |
taaaaatggatggaaagctgacatcaaatattaaaatagtgggagcttttgaattacaacaacataa-tttaaaaaaaaacaaaatatgaatggactaag |
31171716 |
T |
 |
| Q |
413 |
-nnnnnnnnctatattacaaggacaaaatgtgaattttaccctaattgtaataatatact |
471 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31171717 |
aaaaaaaaactatattacaaggacaaaatgtgaattttaccctaatcgtaataatatact |
31171776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 31152756 - 31152926
Alignment:
| Q |
14 |
gaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaa-accaaaatgatgaagtctacattatcacttgatgaattggggataattt |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31152756 |
gaagaagattgatgtttttaagatgaaaatggtaattggttgtatgaaaaaaccaaaatgatgaagtctacattatcacttgatgaattgggggtaattt |
31152855 |
T |
 |
| Q |
113 |
acctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatg |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31152856 |
acctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatg |
31152926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 8900669 - 8900807
Alignment:
| Q |
8 |
agagaagaagaagattgatgtttttaagatgaaaatggtaattggttgtaag-aaaaaccaaaatgatgaagtctacattatcacttgatgaattgggga |
106 |
Q |
| |
|
||||| ||||||| ||| |||| || |||| |||||||||||| ||||||| |||||| |||||| ||||| |||||||||| |||||||||||||| |
|
|
| T |
8900669 |
agagatgaagaagtttgttgttcttgagataaaaatggtaatttattgtaagaaaaaacaaaaatgttgaagcctacattatccattgatgaattgggg- |
8900767 |
T |
 |
| Q |
107 |
taatttacctataataacaagtaggattcgattatgaaac |
146 |
Q |
| |
|
||||||| | ||||||||||||| ||||||||||||||| |
|
|
| T |
8900768 |
taatttatccctaataacaagtagaattcgattatgaaac |
8900807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 757865 - 757960
Alignment:
| Q |
80 |
ctacattatcacttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
|||| |||||| |||||||||| |||||||||||| | |||||| ||||||||||| ||||| || ||| |||||| ||||||||| ||||||||| |
|
|
| T |
757865 |
ctactttatcatttgatgaatttgggataatttacat-taataataagtaggattcaattatagaatgaaggagatgaagatcacatgttgaatgaa |
757960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 23944132 - 23944030
Alignment:
| Q |
8 |
agagaagaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaacca-aaatgatgaagtctacattatcacttgatgaattgggga |
106 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||| || | |||||||||||| | ||||| ||| |||||||| | |||||||||||| ||| |
|
|
| T |
23944132 |
agagaagaagaagtttgatgttcttaagatgaaaatggcaactaattgtaagaaaaaacttaaatggtgagacctacattaccccttgatgaattgagga |
23944033 |
T |
 |
| Q |
107 |
taa |
109 |
Q |
| |
|
||| |
|
|
| T |
23944032 |
taa |
23944030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 31152917 - 31152955
Alignment:
| Q |
147 |
gaaagagatggagatcacattttgaatgaaacagatgta |
185 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
31152917 |
gaaacagatggagatcacattttgaatgaaacagatgta |
31152955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 44755105 - 44754967
Alignment:
| Q |
40 |
aaatggtaattggttgtaagaaaaa-ccaaaatgatgaagtctacattatcacttgatgaattggggataatttacctataataacaagtaggattcgat |
138 |
Q |
| |
|
||||| || ||| |||||||||||| ||||||| |||| |||||||||| ||||||||||| | | |||||||| |||||| ||| | ||||||| |
|
|
| T |
44755105 |
aaatgatatttgattgtaagaaaaaaccaaaatagtgaaacctacattatcccttgatgaattcgaggcaatttacccctaataataagccgaattcgat |
44755006 |
T |
 |
| Q |
139 |
tatgaaacgaaagagatggagatcacattttgaatgaaa |
177 |
Q |
| |
|
|||| | | || |||||| ||||||||| |||||||||| |
|
|
| T |
44755005 |
tatggatcaaaggagatgaagatcacatgttgaatgaaa |
44754967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 23944228 - 23944095
Alignment:
| Q |
80 |
ctacattatcacttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaaca |
179 |
Q |
| |
|
|||||||||| ||||||||||| ||||| | ||||| | || | ||||| ||||||||| || || || |||||||| ||||||| |||||||||| | |
|
|
| T |
23944228 |
ctacattatcccttgatgaatttgggatga-ttacccctgatgataagtatgattcgattctggaataaaggagatggaaatcacatgttgaatgaaaga |
23944130 |
T |
 |
| Q |
180 |
gatgtagaagattgaagtttttaaagatgaaaatgg |
215 |
Q |
| |
|
|| | ||||| |||| ||| || ||||||||||||| |
|
|
| T |
23944129 |
gaagaagaagtttgatgttctt-aagatgaaaatgg |
23944095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 32138906 - 32138961
Alignment:
| Q |
9 |
gagaagaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaa |
64 |
Q |
| |
|
|||| |||||| |||||||| ||||||||||||||||||||| || ||||||||| |
|
|
| T |
32138906 |
gagatgaagaattttgatgttcttaagatgaaaatggtaattgattttaagaaaaa |
32138961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 25062540 - 25062358
Alignment:
| Q |
14 |
gaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaa--ccaaaatgatgaagtctacattatcacttgatgaattggggataatt |
111 |
Q |
| |
|
||||||| ||||| || || ||||||||| |||||||| |||||||||||| ||||| || ||||| ||||||||| |||||||||||| || ||||| |
|
|
| T |
25062540 |
gaagaagtttgatattcttgagatgaaaacggtaattgattgtaagaaaaaaaccaaattggtgaagcctacattattccttgatgaattgagggtaatt |
25062441 |
T |
 |
| Q |
112 |
tacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaagattga |
194 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| ||| || |||||| ||||||||| || |||||| |||||| ||||| |||| |
|
|
| T |
25062440 |
tacccctaataacaagtaggatttgattatggaacaaaggagatgaagatcacatgtttaatgaagcagatgaagaagtttga |
25062358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 20512790 - 20512882
Alignment:
| Q |
121 |
taacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaagattgaagtttttaaagatgaaaatg |
214 |
Q |
| |
|
|||||| || ||||||||||||||||||| || |||||||| |||| || |||||| ||||| ||||| |||| |||| | |||||||||||| |
|
|
| T |
20512790 |
taacaaatatgattcgattatgaaacgaaggatatggagattacatgttaaatgaagaagatgaagaagtttgatgtttat-aagatgaaaatg |
20512882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 22050990 - 22050909
Alignment:
| Q |
95 |
atgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
||||||||||| ||||||||| |||| | || || ||||||||| ||||| ||| |||||| ||||||||| ||||||||| |
|
|
| T |
22050990 |
atgaattgggggtaatttacccttaatgataaatatgattcgattctgaaaggaatgagatgaagatcacatgttgaatgaa |
22050909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 55897693 - 55897608
Alignment:
| Q |
92 |
ttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacg-aaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
||||||||||| ||||| |||||| ||||||||||||| ||| ||| || |||| ||||||||| |||||| || ||||||||| |
|
|
| T |
55897693 |
ttgatgaattgaggatagtttacccttaataacaagtagaatttaattttggaacgaaaagagatgaagatcatatgttgaatgaa |
55897608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 59; Significance: 8e-25; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 25606561 - 25606411
Alignment:
| Q |
39 |
aaaatggtaattggttgtaagaaaa-accaaaatgatgaagtctacattatcacttgatgaattggggataatttacctataataacaagtaggattcga |
137 |
Q |
| |
|
|||||| |||||| ||||||||||| || |||||| |||| ||||| ||||| |||||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
25606561 |
aaaatgctaattgattgtaagaaaagactaaaatggtgaaatctacgttatcttctgatgaattgagggtaatttacccttaataacaagtaggattcgt |
25606462 |
T |
 |
| Q |
138 |
ttatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaa |
188 |
Q |
| |
|
||||| |||||| |||||| | |||| || |||||||||||||||| |||| |
|
|
| T |
25606461 |
ttatggaacgaaggagatgtatatcatatgttgaatgaaacagatgaagaa |
25606411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 28282854 - 28282665
Alignment:
| Q |
34 |
agatgaaaatggtaattggttgtaagaaaaac-caaaatgatgaagtctacatta-----tcacttgatgaattggggataatttacctataataacaag |
127 |
Q |
| |
|
||||||||||| |||||| |||||||||||| ||||||| ||||| |||||||| ||| ||||||||||| | ||||||||| |||||||||| |
|
|
| T |
28282854 |
agatgaaaatgataattgattgtaagaaaaaatcaaaatggtgaagcctacattaattattca-ttgatgaattgacggtaatttacccctaataacaag |
28282756 |
T |
 |
| Q |
128 |
taggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaagattgaagtttttaaagatgaaaatggtatt |
219 |
Q |
| |
|
|| ||| ||||||| |||||| |||||||||||||||| ||||||||| ||||| ||||| |||| | || | |||||||||||||||| |
|
|
| T |
28282755 |
taaaatttgattatggaacgaatgagatggagatcacatattgaatgaagcagataaagaagtttgatg-ttatggagatgaaaatggtatt |
28282665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 38576813 - 38576967
Alignment:
| Q |
34 |
agatgaaaatggtaattggttgtaagaaaaaccaaaat-gatgaagtctacattatcacttgatgaattggggataatttacctataataacaagtagga |
132 |
Q |
| |
|
||||||||||||||| || |||||||||||| | || ||||| | |||||||| | ||| ||||||||||| |||||||| |||| |||| || || |
|
|
| T |
38576813 |
agatgaaaatggtaactgattgtaagaaaaaaccttatcgatgaggcctacattacccctttatgaattgggg-taatttactcctaatgacaaatatga |
38576911 |
T |
 |
| Q |
133 |
ttcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaa |
188 |
Q |
| |
|
|| ||||||| |||||||||||||| ||||||| |||||||||| ||||| |||| |
|
|
| T |
38576912 |
tttgattatggtacgaaagagatggaaatcacatgttgaatgaaagagatgaagaa |
38576967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 183
Target Start/End: Original strand, 9050219 - 9050320
Alignment:
| Q |
82 |
acattatcacttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacaga |
181 |
Q |
| |
|
|||||||| |||||||||||| || |||||||||| |||| || ||||||||||||||||||||| || ||||| | |||| || || ||||||| ||| |
|
|
| T |
9050219 |
acattatctcttgatgaattgagggtaatttacctctaatgactagtaggattcgattatgaaacaaagaagatgtaaatcaaatgttaaatgaaagaga |
9050318 |
T |
 |
| Q |
182 |
tg |
183 |
Q |
| |
|
|| |
|
|
| T |
9050319 |
tg |
9050320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 16576389 - 16576287
Alignment:
| Q |
91 |
cttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaaga |
190 |
Q |
| |
|
|||||||||||||| ||||||||| |||| | ||||| ||||||||| || |||||| |||| ||||||||||| ||||||||| ||||| ||||| |
|
|
| T |
16576389 |
cttgatgaattgggt-taatttacccctaatgataagtatgattcgattctggaacgaatgagaaggagatcacatgttgaatgaaggagatgaagaagt |
16576291 |
T |
 |
| Q |
191 |
ttga |
194 |
Q |
| |
|
|||| |
|
|
| T |
16576290 |
ttga |
16576287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 16576303 - 16576248
Alignment:
| Q |
9 |
gagaagaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaa |
64 |
Q |
| |
|
|||| ||||||| |||||||| || ||| |||||||||||||| |||||||||||| |
|
|
| T |
16576303 |
gagatgaagaagtttgatgttcttgagaggaaaatggtaattgattgtaagaaaaa |
16576248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 34176844 - 34176761
Alignment:
| Q |
93 |
tgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
||||||||||||||||||| | |||| | || || |||||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
34176844 |
tgatgaattggggataattcaatcctaatgaaaaatatgattcgattatgaaacgaaagagatgaagatcatatgttaaatgaa |
34176761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 9050074 - 9050142
Alignment:
| Q |
107 |
taatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatga |
175 |
Q |
| |
|
||||||||| |||| ||||| | ||||||||| || |||||| ||||||||||||| || |||||||| |
|
|
| T |
9050074 |
taatttacccttaatgacaagcatgattcgattttgtaacgaatgagatggagatcatatgttgaatga |
9050142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0136 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0136
Description:
Target: scaffold0136; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 36907 - 37029
Alignment:
| Q |
92 |
ttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaagat |
191 |
Q |
| |
|
|||||||||||| | |||||||| ||||||| |||||||||||||||||||||| || |||||| ||||||||| |||||| || ||||| |||| | |
|
|
| T |
36907 |
ttgatgaattggaggtaatttacacataataataagtaggattcgattatgaaacaaatgagatgaagatcacatgttgaataaacgagatgaagaaatt |
37006 |
T |
 |
| Q |
192 |
tgaagtttttaaagatgaaaatg |
214 |
Q |
| |
|
||| || ||| |||||||||||| |
|
|
| T |
37007 |
tgatgtgttttaagatgaaaatg |
37029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 29969251 - 29969154
Alignment:
| Q |
80 |
ctacattatcacttgatgaattggggataatttacctat-aataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
|||||||| | |||||||||||| |||||||||||| | ||| |||||||| ||||||||||| ||||||||||||| | ||||||| ||||||||| |
|
|
| T |
29969251 |
ctacattaccccttgatgaattgtggataatttaccccttaatgacaagtagaattcgattatggaacgaaagagatgaatatcacatgttgaatgaa |
29969154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 32166735 - 32166819
Alignment:
| Q |
92 |
ttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
||||||||||||| |||||||||| |||| ||||||| ||||||||| || ||||||||||||| | ||||||| || |||||| |
|
|
| T |
32166735 |
ttgatgaattgggtgtaatttacctctaatgacaagtacgattcgattttggaacgaaagagatgtaaatcacatgttaaatgaa |
32166819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 29093668 - 29093593
Alignment:
| Q |
101 |
tggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
||||| ||||||||| |||| |||||| |||| ||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
29093668 |
tgggggtaatttaccctcaataccaagtatgatttgattatggaacgaaagagatggagatcacatgttgaatgaa |
29093593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 6803876 - 6803985
Alignment:
| Q |
92 |
ttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaagat |
191 |
Q |
| |
|
||||||||||||| ||||||||| |||| |||||||||||| |||| ||||| ||| |||||||| | ||||| ||||||||| |||| ||||| | |
|
|
| T |
6803876 |
ttgatgaattgggagtaatttacccctaatgacaagtaggatttgattttgaaatgaaggagatggataacacatggtgaatgaaaaagataaagaagtt |
6803975 |
T |
 |
| Q |
192 |
tgaagttttt |
201 |
Q |
| |
|
||| |||||| |
|
|
| T |
6803976 |
tgatgttttt |
6803985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 35574673 - 35574806
Alignment:
| Q |
22 |
ttgatgtttttaagatgaaaatggtaattggttgtaagaaaaaccaaaatgatgaagtctacattatcacttgatgaattggggataatttacctataat |
121 |
Q |
| |
|
|||||||| ||||||||||||| |||| | |||||||||||||| | |||| |||| |||||| ||||||||||| || ||||||||| |||| |
|
|
| T |
35574673 |
ttgatgttcttaagatgaaaatcgtaactaattgtaagaaaaaccctatcaatgaggtctccattattcattgatgaattgagggtaatttaccgctaat |
35574772 |
T |
 |
| Q |
122 |
aacaagtaggattcgattatgaaacgaaagagat |
155 |
Q |
| |
|
|||| || ||||||||| || |||||||||||| |
|
|
| T |
35574773 |
gacaactatgattcgattttggaacgaaagagat |
35574806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 6630316 - 6630407
Alignment:
| Q |
92 |
ttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatg |
183 |
Q |
| |
|
||||||||||| | ||||||||| |||| |||||||||||| |||| ||||| ||| |||||||| | ||||| |||||||||| ||||| |
|
|
| T |
6630316 |
ttgatgaattgagagtaatttacccctaatgacaagtaggatttgattttgaaatgaaggagatggataacacatgttgaatgaaaaagatg |
6630407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 37010282 - 37010403
Alignment:
| Q |
95 |
atgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaagattga |
194 |
Q |
| |
|
||||||||||| ||| || || ||||||||| || |||||||||||| || ||| ||||| |||||||||| || ||||||| | ||| | ||| |||| |
|
|
| T |
37010282 |
atgaattgggggtaaattgcccctaataacaaatatgattcgattatggaatgaaggagatagagatcacatgttaaatgaaagaaatgaataagtttga |
37010381 |
T |
 |
| Q |
195 |
agtttttaaagatgaaaatggta |
217 |
Q |
| |
|
|||||| |||||||||||||| |
|
|
| T |
37010382 |
tgttttt-gagatgaaaatggta |
37010403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 32166655 - 32166711
Alignment:
| Q |
9 |
gagaagaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaac |
65 |
Q |
| |
|
|||| ||||||| |||||||| || ||||||||||| |||||| | ||||||||||| |
|
|
| T |
32166655 |
gagatgaagaagtttgatgttcttgagatgaaaatgataattgatagtaagaaaaac |
32166711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 41264515 - 41264430
Alignment:
| Q |
92 |
ttgatgaattggggataatttacctataataacaagtaggattcgattatga-aacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
|||||||||| || |||||||||| ||||||||| || ||||||||||||| ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
41264515 |
ttgatgaattaaggttaatttacctctaataacaattatgattcgattatgataacgaaagagatgaagatcacatgttgaatgaa |
41264430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 2243250 - 2243374
Alignment:
| Q |
91 |
cttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgtagaaga |
190 |
Q |
| |
|
||||||||||||||| |||||||||| |||| ||||||| |||||||| | |||||| ||||||||||||||| ||||||||| | ||| ||||| |
|
|
| T |
2243250 |
cttgatgaattgggg-taatttacctctaatgacaagtaaaattcgattctagaacgaagaagatggagatcacatgttgaatgaaggatatgaagaagt |
2243348 |
T |
 |
| Q |
191 |
ttgaagtttttaaagatgaaaatggta |
217 |
Q |
| |
|
|||| ||| || |||||||||||||| |
|
|
| T |
2243349 |
ttgatgttctt-gagatgaaaatggta |
2243374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 5205471 - 5205546
Alignment:
| Q |
91 |
cttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacat |
166 |
Q |
| |
|
||||||||||||||| || |||||| |||| |||| | ||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
5205471 |
cttgatgaattgggggtattttacccttaatgacaatcatgattcgattataaaacgaaatagatggagatcacat |
5205546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 7215403 - 7215486
Alignment:
| Q |
93 |
tgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
|||||||||| | ||||||||| | ||||||||| || ||| || || || ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
7215403 |
tgatgaattgagaataatttacatctaataacaactatgatgcggttctggaacgaaagagatgaagatcacatgttgaatgaa |
7215486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 40483829 - 40483712
Alignment:
| Q |
85 |
ttatcacttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacagatgt |
184 |
Q |
| |
|
||||| |||||||||||| || ||| ||||| ||| | ||||| ||||||||| || |||||| |||||| ||||||||| |||||||| ||||| |
|
|
| T |
40483829 |
ttatctcttgatgaattgagggtaaattacccccaatgataagtatgattcgattttggaacgaatgagatgaagatcacatgttgaatgagtgagatga |
40483730 |
T |
 |
| Q |
185 |
agaagattgaagttttta |
202 |
Q |
| |
|
||||| |||| ||||||| |
|
|
| T |
40483729 |
agaagtttgatgttttta |
40483712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 17736799 - 17736829
Alignment:
| Q |
34 |
agatgaaaatggtaattggttgtaagaaaaa |
64 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
17736799 |
agatgaaaatggtaattggttgtaagaaaaa |
17736829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 7215322 - 7215371
Alignment:
| Q |
15 |
aagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaa |
64 |
Q |
| |
|
|||||| |||||||| || |||||||||||||| ||| |||||||||||| |
|
|
| T |
7215322 |
aagaagtttgatgttcttgagatgaaaatggtagttgattgtaagaaaaa |
7215371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 10775219 - 10775127
Alignment:
| Q |
8 |
agagaagaagaagattgatgtttttaagatgaaaatggtaattggttgtaag-aaaaaccaaaatgatgaagtctacattatcacttgatgaa |
99 |
Q |
| |
|
||||| ||||||| |||||||| ||||||||||||||||||||| || |||| |||||| |||||| |||||||||| |||| ||||||||| |
|
|
| T |
10775219 |
agagatgaagaagtttgatgttcttaagatgaaaatggtaattgattctaagaaaaaactaaaatggtgaagtctaccatatctcttgatgaa |
10775127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 7104400 - 7104322
Alignment:
| Q |
98 |
aattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
|||||||| ||| |||| | |||| ||||||| ||||||||| |||||||||||||||| | || |||| ||||||||| |
|
|
| T |
7104400 |
aattgggggtaaattacttctaatgacaagtatgattcgattctgaaacgaaagagatgaatattacatgttgaatgaa |
7104322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 10775125 - 10775069
Alignment:
| Q |
125 |
aagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacaga |
181 |
Q |
| |
|
|||||||||||||||||| |||||| | ||| ||||||||| |||||||||||||| |
|
|
| T |
10775125 |
aagtaggattcgattatggaacgaagaaaatgaagatcacatgttgaatgaaacaga |
10775069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 46081026 - 46080971
Alignment:
| Q |
9 |
gagaagaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaa |
64 |
Q |
| |
|
|||| ||||||| || ||||| || |||||||||||||||||| |||||||||||| |
|
|
| T |
46081026 |
gagatgaagaagtttaatgttcttgagatgaaaatggtaattgattgtaagaaaaa |
46080971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 44330513 - 44330463
Alignment:
| Q |
14 |
gaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaa |
64 |
Q |
| |
|
||||||| |||||||||| | ||||||||||||| ||||||||||||||| |
|
|
| T |
44330513 |
gaagaagtgtgatgtttttgatatgaaaatggtaaatggttgtaagaaaaa |
44330463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 5500740 - 5500833
Alignment:
| Q |
80 |
ctacattatcacttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaat |
173 |
Q |
| |
|
|||||||| | |||||||||||| ||||||||| || |||||| ||| ||| |||| ||||||||| ||||||||||||||| |||||| |
|
|
| T |
5500740 |
ctacattacctcttgatgaattgaagataatttatctctaataatctgtattatttgattctgaaacgaataagatggagatcacatgttgaat |
5500833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 49897996 - 49897927
Alignment:
| Q |
107 |
taatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
|||||||||| |||| |||| || ||||||||| | ||| || |||||||||||||||| ||||||||| |
|
|
| T |
49897996 |
taatttacctctaatgacaattatgattcgattctagaacaaaggagatggagatcacatgttgaatgaa |
49897927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 3367871 - 3367839
Alignment:
| Q |
144 |
aacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
3367871 |
aacgaaagagatggagatcacatgttgaatgaa |
3367839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 7104549 - 7104461
Alignment:
| Q |
78 |
gtctacattatcacttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacat |
166 |
Q |
| |
|
|||||||||| | ||||||||||||||| | |||| | ||||| ||||||| ||||| ||| ||||||||| || ||| |||| |||| |
|
|
| T |
7104549 |
gtctacattaccccttgatgaattgggggtggtttagccataatgacaagtatgattcaattttgaaacgaaggaaatgtagattacat |
7104461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 44342226 - 44342254
Alignment:
| Q |
15 |
aagaagattgatgtttttaagatgaaaat |
43 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
44342226 |
aagaagattgatgtttttaagatgaaaat |
44342254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 32047325 - 32047191
Alignment:
| Q |
82 |
acattatcacttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaaacaga |
181 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| |||| | ||||||||||| |||||| || ||| ||| | | |||| || ||||||||| ||| |
|
|
| T |
32047325 |
acattatcccttgatgaattgaggataatttacctctaatgataagtaggattcaattatggaatgaagaagacgaatatcatatgttgaatgaatgaga |
32047226 |
T |
 |
| Q |
182 |
tgtagaagattgaagtttttaaagatgaaaatggta |
217 |
Q |
| |
|
|| ||||| |||| ||| || |||||||||||||| |
|
|
| T |
32047225 |
tgaagaagtttgatgttctt-gagatgaaaatggta |
32047191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 32342655 - 32342521
Alignment:
| Q |
9 |
gagaagaagaagattgatgtttttaagatgaaaatggtaattggttgtaaga-aaaaccaaaatgatgaagtctacattatcacttgatga--attgggg |
105 |
Q |
| |
|
|||| ||| ||| ||||||||||| ||||||||||| |||||| |||||||| ||||| |||||| ||| | |||||| ||| |||||||| ||||||| |
|
|
| T |
32342655 |
gagatgaaaaagtttgatgtttttgagatgaaaatgataattgattgtaagaaaaaactaaaatggtgaggcctacatcatcccttgatgaacattgggg |
32342556 |
T |
 |
| Q |
106 |
ataatttacctataataacaagtaggattcgattat |
141 |
Q |
| |
|
||||||| | |||| |||| || ||||||||||| |
|
|
| T |
32342555 |
-taatttatcgctaatgacaaatatgattcgattat |
32342521 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 7556040 - 7556134
Alignment:
| Q |
83 |
cattatcacttgatgaattggggataatttacctataataacaagtaggattcgattatga-aacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
||||||| ||||||||||| || ||||||| | ||||||||| || ||||||||||||| ||||||||| | | ||||||||| ||||||||| |
|
|
| T |
7556040 |
cattatccattgatgaattgagggtaatttatccctaataacaactatgattcgattatgataacgaaagataggaagatcacatgttgaatgaa |
7556134 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 20068057 - 20067977
Alignment:
| Q |
92 |
ttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaa |
172 |
Q |
| |
|
||||||||||| | ||||||||| ||| |||||||||||||||||||| |||||| ||| | ||||||||| ||||| |
|
|
| T |
20068057 |
ttgatgaattgaaggtaatttacccttaaagacaagtaggattcgattatggaacgaatgaggggaagatcacatgttgaa |
20067977 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 31758278 - 31758193
Alignment:
| Q |
29 |
ttttaagatgaaaatggtaattggttgtaagaaaaaccaaaatgatgaagtctacattatcacttgatgaattggggataatttac |
114 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||| | | || |||| ||||| |||||||||| ||| |||||||| |
|
|
| T |
31758278 |
ttttaagatgaaaatggtaattgattgtaagaaaaacaaaaaaggtaaaatctatattattccttgatgaataaggggtaatttac |
31758193 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 42091892 - 42091959
Alignment:
| Q |
91 |
cttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatgga |
158 |
Q |
| |
|
||||| ||||||||| ||||||||| |||| ||||||| || | ||||||| ||||||||||||||| |
|
|
| T |
42091892 |
cttgacgaattgggggtaatttacccctaatcacaagtaagacttgattatggaacgaaagagatgga |
42091959 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 54437856 - 54437806
Alignment:
| Q |
14 |
gaagaagattgatgtttttaagatgaaaatggtaattggttgtaagaaaaa |
64 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||| || |||||||||||| |
|
|
| T |
54437856 |
gaagaagtttgatgtttttgagattaaaatggtaactgattgtaagaaaaa |
54437806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 51260560 - 51260643
Alignment:
| Q |
91 |
cttgatgaattggggataatttacctataataacaagtaggattcgattatgaaacgaaagagatggagatcacattttgaatgaa |
176 |
Q |
| |
|
||||||||||||||| | |||||||| | || | ||||||||||||||| | ||| |||||| ||||| ||||||| ||||||||| |
|
|
| T |
51260560 |
cttgatgaattgggg-tgatttacct-tcatgataagtaggattcgattctaaaatgaaagatatggaaatcacatgttgaatgaa |
51260643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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