View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16471_low_25 (Length: 402)

Name: NF16471_low_25
Description: NF16471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16471_low_25
NF16471_low_25
[»] chr8 (39 HSPs)
chr8 (20-212)||(35106849-35107041)
chr8 (209-389)||(19176659-19176839)
chr8 (211-386)||(41681132-41681306)
chr8 (209-389)||(12571859-12572040)
chr8 (212-389)||(9930026-9930203)
chr8 (208-387)||(11656450-11656630)
chr8 (210-389)||(44831614-44831793)
chr8 (216-389)||(33328161-33328334)
chr8 (217-389)||(13224645-13224816)
chr8 (211-389)||(31133218-31133396)
chr8 (208-389)||(9178005-9178185)
chr8 (212-373)||(13225023-13225185)
chr8 (210-373)||(19176287-19176451)
chr8 (212-373)||(11656841-11657003)
chr8 (212-373)||(44831246-44831408)
chr8 (208-339)||(34540967-34541098)
chr8 (216-373)||(9928912-9929070)
chr8 (213-362)||(41681529-41681679)
chr8 (209-373)||(33742918-33743082)
chr8 (214-372)||(31133605-31133764)
chr8 (216-373)||(12572235-12572393)
chr8 (215-373)||(33328524-33328683)
chr8 (260-387)||(33743290-33743417)
chr8 (216-389)||(4630161-4630328)
chr8 (211-321)||(11336959-11337069)
chr8 (211-367)||(4629795-4629952)
chr8 (208-351)||(10918121-10918264)
chr8 (212-354)||(8073956-8074097)
chr8 (292-354)||(43958264-43958326)
chr8 (210-389)||(35427182-35427361)
chr8 (211-246)||(9177665-9177700)
chr8 (212-253)||(10919691-10919732)
chr8 (210-266)||(15255850-15255906)
chr8 (208-266)||(6115604-6115662)
chr8 (318-388)||(18805267-18805337)
chr8 (305-373)||(9177724-9177793)
chr8 (209-258)||(43958205-43958254)
chr8 (199-235)||(14055145-14055181)
chr8 (214-266)||(28254919-28254971)
[»] chr5 (49 HSPs)
chr5 (208-389)||(18183338-18183519)
chr5 (211-389)||(2865124-2865302)
chr5 (213-389)||(5819298-5819474)
chr5 (213-389)||(8647438-8647614)
chr5 (213-389)||(19359136-19359312)
chr5 (209-389)||(15708967-15709146)
chr5 (211-389)||(24362205-24362383)
chr5 (211-389)||(8460928-8461106)
chr5 (208-389)||(15372242-15372423)
chr5 (212-389)||(29455111-29455288)
chr5 (210-385)||(14215616-14215791)
chr5 (208-389)||(164560-164741)
chr5 (208-373)||(8647822-8647988)
chr5 (211-373)||(5818927-5819090)
chr5 (211-373)||(18182968-18183131)
chr5 (211-373)||(19359520-19359683)
chr5 (211-378)||(14463901-14464067)
chr5 (212-373)||(8461315-8461477)
chr5 (215-373)||(2864756-2864915)
chr5 (212-389)||(16018588-16018763)
chr5 (213-372)||(164191-164350)
chr5 (209-373)||(24331555-24331722)
chr5 (215-373)||(14215243-14215402)
chr5 (215-389)||(24331929-24332107)
chr5 (219-373)||(24361843-24361997)
chr5 (212-375)||(25000471-25000635)
chr5 (219-373)||(24325218-24325372)
chr5 (212-373)||(29454739-29454901)
chr5 (211-375)||(16018969-16019134)
chr5 (213-355)||(7349420-7349562)
chr5 (235-389)||(25000112-25000266)
chr5 (208-373)||(15709353-15709518)
chr5 (215-338)||(15371873-15371995)
chr5 (214-339)||(4222142-4222266)
chr5 (213-353)||(4623148-4623286)
chr5 (213-339)||(7348559-7348685)
chr5 (219-351)||(6019177-6019309)
chr5 (213-351)||(4219663-4219800)
chr5 (214-330)||(6018315-6018430)
chr5 (226-352)||(4624631-4624757)
chr5 (264-355)||(13814131-13814226)
chr5 (212-375)||(41834443-41834606)
chr5 (295-339)||(14462686-14462730)
chr5 (312-389)||(16752680-16752757)
chr5 (211-264)||(15029804-15029857)
chr5 (211-288)||(22651782-22651859)
chr5 (332-389)||(24325580-24325637)
chr5 (312-389)||(28495211-28495288)
chr5 (210-266)||(15115585-15115641)
[»] scaffold0295 (2 HSPs)
scaffold0295 (210-389)||(4790-4969)
scaffold0295 (215-327)||(5222-5334)
[»] chr3 (69 HSPs)
chr3 (213-389)||(39555946-39556122)
chr3 (211-389)||(31779021-31779199)
chr3 (211-389)||(5136978-5137156)
chr3 (210-387)||(20840557-20840734)
chr3 (212-389)||(23644461-23644638)
chr3 (208-389)||(24300925-24301106)
chr3 (216-389)||(41046703-41046876)
chr3 (212-389)||(37726928-37727105)
chr3 (215-389)||(25853596-25853770)
chr3 (212-389)||(27393946-27394123)
chr3 (208-389)||(30104477-30104657)
chr3 (213-382)||(43973441-43973610)
chr3 (208-387)||(32535330-32535513)
chr3 (210-368)||(48452986-48453144)
chr3 (208-389)||(26837725-26837905)
chr3 (217-389)||(22425182-22425354)
chr3 (208-373)||(43973824-43973990)
chr3 (208-373)||(37727314-37727480)
chr3 (209-389)||(26274936-26275115)
chr3 (212-389)||(17464860-17465038)
chr3 (212-373)||(20840945-20841107)
chr3 (212-373)||(39555577-39555739)
chr3 (213-373)||(25853234-25853395)
chr3 (211-373)||(4275748-4275911)
chr3 (209-375)||(29801798-29801965)
chr3 (212-373)||(31778652-31778814)
chr3 (210-373)||(17464488-17464652)
chr3 (212-373)||(27393660-27393822)
chr3 (210-373)||(5137365-5137529)
chr3 (208-373)||(22424809-22424975)
chr3 (212-373)||(30098147-30098309)
chr3 (216-339)||(32534962-32535085)
chr3 (208-373)||(23644849-23645015)
chr3 (216-354)||(25612381-25612519)
chr3 (211-373)||(26837358-26837521)
chr3 (213-352)||(23228414-23228552)
chr3 (216-373)||(26274570-26274728)
chr3 (213-330)||(29801356-29801473)
chr3 (216-373)||(24300560-24300717)
chr3 (213-355)||(50116812-50116954)
chr3 (214-353)||(32697106-32697244)
chr3 (208-354)||(51474737-51474884)
chr3 (216-373)||(41047083-41047239)
chr3 (211-354)||(37220555-37220698)
chr3 (214-327)||(51473429-51473542)
chr3 (211-351)||(45965936-45966076)
chr3 (215-357)||(25420542-25420684)
chr3 (211-299)||(37222030-37222118)
chr3 (208-309)||(25419139-25419241)
chr3 (232-341)||(18010162-18010271)
chr3 (209-390)||(49407792-49407972)
chr3 (210-389)||(27200062-27200240)
chr3 (212-355)||(23227261-23227398)
chr3 (209-389)||(50900898-50901077)
chr3 (318-389)||(55192222-55192293)
chr3 (203-389)||(37075676-37075864)
chr3 (216-327)||(32695706-32695817)
chr3 (210-266)||(52375824-52375880)
chr3 (212-389)||(51827956-51828133)
chr3 (211-389)||(27199700-27199878)
chr3 (332-389)||(29801535-29801592)
chr3 (216-288)||(22370599-22370671)
chr3 (212-266)||(330329-330383)
chr3 (208-266)||(55390090-55390148)
chr3 (213-266)||(40275093-40275146)
chr3 (210-266)||(2051292-2051348)
chr3 (212-244)||(25611497-25611529)
chr3 (212-264)||(49720856-49720908)
chr3 (210-266)||(52237310-52237366)
[»] chr1 (47 HSPs)
chr1 (212-389)||(50970647-50970824)
chr1 (211-389)||(18984117-18984295)
chr1 (212-382)||(5540194-5540364)
chr1 (212-389)||(29869619-29869796)
chr1 (212-382)||(15646571-15646741)
chr1 (215-389)||(33144288-33144462)
chr1 (216-389)||(15173099-15173272)
chr1 (213-382)||(29306953-29307122)
chr1 (213-389)||(8678911-8679086)
chr1 (216-389)||(5962947-5963120)
chr1 (209-389)||(9018969-9019149)
chr1 (213-389)||(21856412-21856588)
chr1 (213-389)||(17433216-17433392)
chr1 (211-387)||(26859431-26859606)
chr1 (213-382)||(29307317-29307487)
chr1 (215-389)||(39154021-39154195)
chr1 (209-382)||(9019338-9019512)
chr1 (215-375)||(17433597-17433758)
chr1 (211-371)||(50970276-50970437)
chr1 (208-373)||(29870003-29870169)
chr1 (206-339)||(18984538-18984671)
chr1 (209-373)||(21856038-21856203)
chr1 (214-373)||(5539817-5539977)
chr1 (214-373)||(8678542-8678702)
chr1 (214-372)||(4636356-4636515)
chr1 (211-373)||(15173478-15173640)
chr1 (208-373)||(26859054-26859220)
chr1 (212-373)||(39154404-39154566)
chr1 (221-373)||(33143925-33144078)
chr1 (211-373)||(15646190-15646353)
chr1 (212-353)||(52268289-52268430)
chr1 (214-373)||(5962579-5962739)
chr1 (273-387)||(4636033-4636146)
chr1 (208-299)||(2733416-2733507)
chr1 (215-329)||(52269177-52269291)
chr1 (213-373)||(17112282-17112442)
chr1 (215-288)||(47826966-47827039)
chr1 (221-309)||(47827037-47827125)
chr1 (202-375)||(44802555-44802728)
chr1 (213-294)||(50419725-50419806)
chr1 (210-383)||(17088516-17088688)
chr1 (312-389)||(45048253-45048330)
chr1 (211-274)||(52235153-52235216)
chr1 (212-266)||(29438929-29438983)
chr1 (312-389)||(17088249-17088326)
chr1 (215-264)||(50304441-50304490)
chr1 (216-264)||(17641864-17641912)
[»] chr7 (39 HSPs)
chr7 (211-389)||(19830418-19830596)
chr7 (212-389)||(37786766-37786943)
chr7 (213-389)||(19590525-19590701)
chr7 (211-387)||(35289272-35289448)
chr7 (216-389)||(29100220-29100393)
chr7 (212-389)||(38858642-38858819)
chr7 (213-387)||(32004985-32005159)
chr7 (210-387)||(2659211-2659388)
chr7 (211-387)||(34534162-34534338)
chr7 (208-373)||(19590909-19591075)
chr7 (216-389)||(4641443-4641616)
chr7 (219-382)||(23953105-23953268)
chr7 (211-382)||(4478076-4478247)
chr7 (208-373)||(38859025-38859191)
chr7 (203-371)||(37787153-37787322)
chr7 (211-373)||(2658837-2659000)
chr7 (211-372)||(32004612-32004774)
chr7 (211-373)||(34533789-34533952)
chr7 (213-372)||(35288903-35289063)
chr7 (212-373)||(19830804-19830965)
chr7 (209-355)||(38160947-38161093)
chr7 (210-373)||(23952727-23952892)
chr7 (226-339)||(29099863-29099976)
chr7 (216-373)||(4641828-4641983)
chr7 (211-351)||(28583437-28583577)
chr7 (214-354)||(28584326-28584466)
chr7 (312-389)||(35579256-35579333)
chr7 (212-277)||(39137014-39137080)
chr7 (216-389)||(35578902-35579074)
chr7 (203-389)||(7732478-7732664)
chr7 (318-382)||(32427397-32427461)
chr7 (212-268)||(34595263-34595319)
chr7 (212-288)||(49064033-49064109)
chr7 (211-266)||(787279-787334)
chr7 (215-389)||(9181534-9181708)
chr7 (203-266)||(27245194-27245256)
chr7 (213-266)||(26048439-26048492)
chr7 (209-266)||(48247583-48247640)
chr7 (208-264)||(16917708-16917764)
[»] chr6 (37 HSPs)
chr6 (211-389)||(20741098-20741276)
chr6 (208-389)||(10900299-10900480)
chr6 (212-389)||(15828010-15828187)
chr6 (211-389)||(18257135-18257313)
chr6 (213-389)||(11276951-11277127)
chr6 (209-389)||(28472633-28472812)
chr6 (209-389)||(29859822-29860001)
chr6 (208-389)||(11444982-11445163)
chr6 (211-387)||(12935528-12935704)
chr6 (209-389)||(31470685-31470865)
chr6 (213-387)||(1149802-1149977)
chr6 (210-373)||(2319669-2319832)
chr6 (210-373)||(12935154-12935318)
chr6 (216-382)||(10899942-10900109)
chr6 (209-373)||(11445371-11445536)
chr6 (209-373)||(22219737-22219902)
chr6 (214-389)||(18505288-18505463)
chr6 (212-389)||(23073998-23074164)
chr6 (211-373)||(23075512-23075675)
chr6 (216-389)||(2322588-2322760)
chr6 (213-376)||(4811372-4811535)
chr6 (216-339)||(18504922-18505045)
chr6 (212-373)||(20741485-20741650)
chr6 (212-373)||(31470314-31470476)
chr6 (212-382)||(11276589-11276760)
chr6 (213-332)||(18257563-18257682)
chr6 (215-355)||(29033436-29033577)
chr6 (214-339)||(15827639-15827766)
chr6 (203-354)||(18296135-18296285)
chr6 (211-301)||(1149463-1149553)
chr6 (213-339)||(4811675-4811801)
chr6 (216-349)||(3835135-3835268)
chr6 (215-355)||(29035040-29035180)
chr6 (212-388)||(35163557-35163734)
chr6 (213-269)||(22534214-22534270)
chr6 (208-389)||(32836367-32836547)
chr6 (194-258)||(5120970-5121034)
[»] chr2 (52 HSPs)
chr2 (211-387)||(11090519-11090695)
chr2 (210-389)||(239350-239528)
chr2 (208-389)||(18451200-18451381)
chr2 (212-389)||(40027139-40027316)
chr2 (208-389)||(40815714-40815895)
chr2 (211-389)||(22374318-22374496)
chr2 (212-389)||(26538096-26538273)
chr2 (208-387)||(28616608-28616788)
chr2 (211-389)||(1978106-1978284)
chr2 (213-389)||(43058333-43058509)
chr2 (210-389)||(3025463-3025641)
chr2 (208-382)||(26538454-26538629)
chr2 (216-386)||(14432145-14432315)
chr2 (208-373)||(7446730-7446896)
chr2 (216-382)||(8425736-8425902)
chr2 (212-373)||(18450829-18450991)
chr2 (212-354)||(20444748-20444890)
chr2 (211-373)||(22374709-22374872)
chr2 (215-373)||(40815347-40815506)
chr2 (212-387)||(7446341-7446519)
chr2 (212-373)||(28616998-28617160)
chr2 (209-373)||(43058717-43058881)
chr2 (203-354)||(20440436-20440586)
chr2 (216-373)||(40027524-40027682)
chr2 (211-373)||(11090904-11091067)
chr2 (214-373)||(239736-239896)
chr2 (211-339)||(1978528-1978656)
chr2 (214-354)||(35781067-35781207)
chr2 (213-354)||(35779708-35779849)
chr2 (211-331)||(28847122-28847242)
chr2 (208-372)||(3025848-3026011)
chr2 (207-373)||(14432525-14432692)
chr2 (216-372)||(8425358-8425514)
chr2 (215-354)||(8972239-8972378)
chr2 (215-355)||(15551501-15551641)
chr2 (215-353)||(15552459-15552596)
chr2 (210-389)||(28143400-28143578)
chr2 (212-371)||(31797166-31797324)
chr2 (211-378)||(14942225-14942394)
chr2 (208-266)||(38007945-38008003)
chr2 (212-266)||(42192736-42192790)
chr2 (208-288)||(62952-63032)
chr2 (210-266)||(25336093-25336149)
chr2 (216-287)||(3822924-3822995)
chr2 (213-264)||(4355755-4355806)
chr2 (208-389)||(20128107-20128288)
chr2 (203-266)||(43216202-43216265)
chr2 (208-266)||(42192235-42192293)
chr2 (213-266)||(6949937-6949990)
chr2 (209-266)||(33921105-33921162)
chr2 (210-266)||(24140167-24140223)
chr2 (212-264)||(44220140-44220192)
[»] chr4 (69 HSPs)
chr4 (208-389)||(11153516-11153697)
chr4 (210-389)||(12234326-12234505)
chr4 (211-383)||(25447611-25447783)
chr4 (202-389)||(25937659-25937846)
chr4 (215-389)||(33109686-33109860)
chr4 (215-389)||(46193774-46193948)
chr4 (212-389)||(15523603-15523780)
chr4 (209-389)||(22434547-22434725)
chr4 (215-382)||(38962195-38962362)
chr4 (215-389)||(4219559-4219733)
chr4 (215-389)||(23494445-23494619)
chr4 (212-389)||(48526195-48526371)
chr4 (208-389)||(51020792-51020973)
chr4 (216-389)||(2118665-2118837)
chr4 (212-389)||(22170306-22170482)
chr4 (213-375)||(46193405-46193568)
chr4 (208-373)||(22434174-22434340)
chr4 (211-389)||(54995437-54995614)
chr4 (213-373)||(25447247-25447408)
chr4 (210-389)||(45082429-45082606)
chr4 (208-373)||(4219943-4220109)
chr4 (211-372)||(15523233-15523395)
chr4 (213-373)||(45082808-45082969)
chr4 (210-329)||(23494872-23494991)
chr4 (210-373)||(20470895-20471059)
chr4 (213-373)||(12234713-12234874)
chr4 (211-373)||(54995067-54995230)
chr4 (216-373)||(48526565-48526723)
chr4 (211-339)||(33109883-33110011)
chr4 (211-362)||(51021191-51021342)
chr4 (212-339)||(25938090-25938217)
chr4 (212-373)||(11153145-11153307)
chr4 (215-373)||(2118295-2118454)
chr4 (216-373)||(18751602-18751760)
chr4 (209-355)||(20958264-20958408)
chr4 (210-327)||(18763951-18764068)
chr4 (281-389)||(12503805-12503913)
chr4 (230-373)||(12503453-12503597)
chr4 (214-354)||(44892552-44892692)
chr4 (231-354)||(43243685-43243807)
chr4 (211-354)||(48293592-48293735)
chr4 (211-355)||(48713749-48713893)
chr4 (213-330)||(35363028-35363146)
chr4 (211-349)||(48708293-48708431)
chr4 (216-349)||(16690939-16691072)
chr4 (231-351)||(43281198-43281317)
chr4 (213-354)||(48294946-48295088)
chr4 (213-349)||(16691481-16691616)
chr4 (214-354)||(44890518-44890658)
chr4 (212-339)||(10258306-10258433)
chr4 (220-351)||(20957196-20957327)
chr4 (212-283)||(16318251-16318322)
chr4 (271-354)||(43242328-43242411)
chr4 (322-389)||(18751971-18752038)
chr4 (212-389)||(17503973-17504149)
chr4 (274-354)||(44220781-44220861)
chr4 (213-309)||(55189528-55189624)
chr4 (312-389)||(35193406-35193483)
chr4 (349-389)||(17504329-17504369)
chr4 (213-354)||(30597925-30598065)
chr4 (212-266)||(55677451-55677505)
chr4 (208-264)||(12593518-12593574)
chr4 (215-266)||(44219377-44219428)
chr4 (203-266)||(45838537-45838600)
chr4 (211-266)||(46737148-46737203)
chr4 (209-266)||(33689825-33689882)
chr4 (210-389)||(34789752-34789932)
chr4 (356-389)||(40160236-40160269)
chr4 (210-266)||(41608908-41608964)
[»] scaffold0951 (2 HSPs)
scaffold0951 (211-387)||(1665-1841)
scaffold0951 (210-373)||(2051-2215)
[»] scaffold0273 (2 HSPs)
scaffold0273 (211-389)||(4576-4754)
scaffold0273 (252-373)||(4242-4364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (209-389)||(134042-134222)
[»] scaffold1223 (2 HSPs)
scaffold1223 (215-389)||(755-928)
scaffold1223 (203-382)||(1116-1296)
[»] scaffold0007 (4 HSPs)
scaffold0007 (212-389)||(64301-64478)
scaffold0007 (216-373)||(64689-64847)
scaffold0007 (215-389)||(205738-205911)
scaffold0007 (212-309)||(210787-210884)
[»] scaffold0027 (2 HSPs)
scaffold0027 (209-389)||(42528-42707)
scaffold0027 (216-382)||(42172-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (216-389)||(10242-10414)
scaffold0432 (216-339)||(9935-10057)
[»] scaffold0417 (2 HSPs)
scaffold0417 (232-389)||(10640-10797)
scaffold0417 (213-373)||(11007-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (212-380)||(18834-19001)
scaffold0176 (208-309)||(19070-19171)
[»] scaffold1585 (1 HSPs)
scaffold1585 (214-355)||(568-709)
[»] scaffold0113 (1 HSPs)
scaffold0113 (212-339)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (281-389)||(16564-16672)
scaffold0157 (230-373)||(16880-17024)
[»] scaffold0057 (2 HSPs)
scaffold0057 (216-354)||(61862-62000)
scaffold0057 (211-287)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (217-354)||(454-589)
[»] scaffold0076 (1 HSPs)
scaffold0076 (216-316)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (262-355)||(7691-7784)
[»] scaffold0097 (1 HSPs)
scaffold0097 (208-266)||(46761-46819)
[»] scaffold1339 (1 HSPs)
scaffold1339 (210-238)||(30-58)
[»] scaffold0830 (1 HSPs)
scaffold0830 (210-238)||(5352-5380)


Alignment Details
Target: chr8 (Bit Score: 181; Significance: 1e-97; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 35106849 - 35107041
Alignment:
Q  20 tgtctgattctcatgaagctagtaagtcgacttttttctcttcaaactcgggttatattatacttaagaattatcgatcaatactatttgaaaatttaat 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35106849 tgtctgattctcatgaagctagtaagtcgacttttttctcttcaaactcgggttatattatacttaagaattgtcgatcaatactatttgaaaatttaat 35106948  T
Q  120 aatatatggtcccccacctccttgagaattcaacaatatatggtcctctcaaatgaaaaattgtccttgttgcaagttctaacatttctttta 212  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35106949 aatatatggtcccccaccttcttgagaattcaacaatatatggtcctctcaaatgaaaaattgtccttgttgcaagttgtaacatttctttta 35107041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 209 - 389
Target Start/End: Complemental strand, 19176839 - 19176659
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176839 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19176740  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  19176739 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 211 - 386
Target Start/End: Original strand, 41681132 - 41681306
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctat 386  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  41681232 gttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 209 - 389
Target Start/End: Original strand, 12571859 - 12572040
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  12571859 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcattt 12571958  T
Q  309 tcgttgcatttttcgtcct-acctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12571959 ttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 212 - 389
Target Start/End: Complemental strand, 9930203 - 9930026
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  9930103 ttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 208 - 387
Target Start/End: Original strand, 11656450 - 11656630
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  11656450 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatt 11656549  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctcc-aaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    || |||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  11656550 tttgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 210 - 389
Target Start/End: Complemental strand, 44831793 - 44831614
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttt 44831694  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     ||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  44831693 tgttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 216 - 389
Target Start/End: Original strand, 33328161 - 33328334
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 217 - 389
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  217 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 316  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  317 tttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 31133218 - 31133396
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||     
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||    
T  31133318 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 9178185 - 9178005
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||    
T  9178185 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatt 9178086  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||||||||||| || |||| |||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||    
T  9178085 tttgttgcatttttcatcttacc-cccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 13225185 - 13225023
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 210 - 373
Target Start/End: Original strand, 19176287 - 19176451
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  310 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
     |||||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 11657003 - 11656841
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| |    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||| |||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 373
Target Start/End: Original strand, 44831246 - 44831408
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 34541098 - 34540967
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  34541098 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatt 34540999  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt 339  Q
    || ||||||||||||||||||||||| |||||    
T  34540998 tttgttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 216 - 373
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||  |||| |  ||||| ||||||||||||||  |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 213 - 362
Target Start/End: Complemental strand, 41681679 - 41681529
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaat 362  Q
    ||||||||||||||||||| | ||||| |  ||||| ||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaat 41681529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 209 - 373
Target Start/End: Original strand, 33742918 - 33743082
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcattt 33743016  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    | | ||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||||||||    
T  33743017 ttgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 214 - 372
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  314 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 372  Q
    |||||||||||| ||||||| ||||| |  ||||| ||| |||||||||| || ||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 215 - 373
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  315 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||| |||||||||||| |  ||||| ||||||||||||||  |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 33743417 - 33743290
Alignment:
Q  260 tggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagaga 359  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  360 aataacagttttagacctaccccctatg 387  Q
    |||||||||||||||||||| |||||||    
T  33743317 aataacagttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 216 - 389
Target Start/End: Complemental strand, 4630328 - 4630161
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||||||  ||||||||||||| | |||||||||||||||||       |||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattatt------gttgc 4630235  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 211 - 321
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||     
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  311 gttgcattttt 321  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 211 - 367
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||| |||||||  | ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||     
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacag 367  Q
     |||||||||||||| ||||||| ||||| |  ||||| ||||||| |||||| ||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 208 - 351
Target Start/End: Original strand, 10918121 - 10918264
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||| ||||||||| |||| ||||||||||||||  |||||||||||| ||||| ||||   |||||||||| |||||  ||||||||| |||||||    
T  10918121 ttttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatt 10918220  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaa 351  Q
    || |||||||||||| || |||| |||||||||| |||||||||    
T  10918221 tttgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 354
Target Start/End: Complemental strand, 8074097 - 8073956
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||   |||||||||||||||||| |    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatcatttt-g 8073999  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||||| ||||  | | |||||||||  ||||||||||||    
T  8073998 ttgcattttacgtcaaaacccccattttaccctccaaaaacgc 8073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 43958264 - 43958326
Alignment:
Q  292 tccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    |||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgc 43958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 389
Target Start/End: Complemental strand, 35427361 - 35427182
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||| || ||  ||| |||| ||||||||  |||| | |||||| || ||    
T  35427361 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atatt 35427263  T
Q  310 cgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
      ||||| |||| |||| | ||||| ||||    ||||| ||||||| |||||| |||||||||| || ||| ||||||||    
T  35427262 ttttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggc 246  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 10919732 - 10919691
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactca 253  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  10919732 aggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 15255850 - 15255906
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  15255850 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 15255906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 6115662 - 6115604
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||| |||||||||||| || ||||| || |||| ||||| |||||||    
T  6115662 ttttaggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcct 6115604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 388
Target Start/End: Original strand, 18805267 - 18805337
Alignment:
Q  318 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgc 388  Q
    |||| ||||||||||| || ||   ||||| |||| ||||||||| |||||||||||| ||||||||||||    
T  18805267 ttttagtcctacctcctatcttcaactccagaaacacagagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  305 attttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||| |||||||||||| ||| |||||||||||| |  ||||| ||||| |||||||| ||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 43958205 - 43958254
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 258  Q
    ||||| |||||||| |||||||||| ||||||||||  ||||||||||||    
T  43958205 tttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 14055181 - 14055145
Alignment:
Q  199 taacatttcttttaggcttaattacacttttggtcct 235  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  14055181 taacatttctttttggcttaattactcttttggtcct 14055145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 28254971 - 28254919
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 28254919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 4e-91; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 18183519 - 18183338
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183519 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 18183420  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183419 tttgttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 211 - 389
Target Start/End: Complemental strand, 2865302 - 2865124
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||| |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 5819474 - 5819298
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 8647438 - 8647614
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 19359136 - 19359312
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 209 - 389
Target Start/End: Original strand, 15708967 - 15709146
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  15708967 tttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcattt 15709066  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15709067 ttgttgcatatttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 211 - 389
Target Start/End: Complemental strand, 24362383 - 24362205
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||     
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  24362283 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 8460928 - 8461106
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 15372423 - 15372242
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15372423 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatt 15372324  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || ||||||||||| || |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||||    
T  15372323 tttgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 212 - 389
Target Start/End: Complemental strand, 29455288 - 29455111
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |||| | ||||||    
T  29455188 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 210 - 385
Target Start/End: Complemental strand, 14215791 - 14215616
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 14215692  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccccta 385  Q
     ||||||||||||||| || | |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  14215691 tgttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 164741 - 164560
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||| | ||||| ||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  164741 ttttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatt 164642  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || ||||||||||| |||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  164641 tttgttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 8647988 - 8647822
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8647988 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 8647889  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||| ||||| | ||||| |  ||||| |||||||||||||| ||||||||||    
T  8647888 tttgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 5818927 - 5819090
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||| ||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 18182968 - 18183131
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  311 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||||| | |||||| | ||| |||||||||||||| ||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 211 - 373
Target Start/End: Complemental strand, 19359683 - 19359520
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||| |||||||||||||||||| ||||| |  ||||| ||||| ||||||||  |||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 211 - 378
Target Start/End: Complemental strand, 14464067 - 14463901
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |  || |||||||||| ||||||||||| ||||||||||||||||||     
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 378  Q
     ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  14463967 attgcatttttcgtcctacc-ccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 8461477 - 8461315
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
     ||||||||||||| ||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 215 - 373
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  315 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 16018588 - 16018763
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| || || ||||||||||||| |||||||||||||||||||||||| |||||      
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||| ||||||||| ||||||||||||||||||||   ||| |||| ||||||||||||||||||||||||||    
T  16018687 ttgcattttccgtcctacc-cccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 213 - 372
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 372  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 209 - 373
Target Start/End: Original strand, 24331555 - 24331722
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc--at 306  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatt 24331654  T
Q  307 tttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||| |||||||||||| ||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  24331655 ttttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 215 - 373
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  315 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 215 - 389
Target Start/End: Complemental strand, 24332107 - 24331929
Alignment:
Q  215 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttc-g 311  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||  |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  312 ttgcattttt-cgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 373
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  219 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 318  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  319 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 212 - 375
Target Start/End: Complemental strand, 25000635 - 25000471
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| |||| ||||||||||||||| |    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 375  Q
    ||||||||||||||| |||||| ||||| |  |||||||||||||||||||| ||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 219 - 373
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  219 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 318  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||| || |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  319 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 212 - 373
Target Start/End: Original strand, 29454739 - 29454901
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
     ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 211 - 375
Target Start/End: Complemental strand, 16019134 - 16018969
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||| |||| ||| ||||||||||||||||     
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  311 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttagac 375  Q
    |||| |||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 213 - 355
Target Start/End: Complemental strand, 7349562 - 7349420
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||  ||||||| |||||||||| ||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    |||| ||||| ||||||| |||||||| | |||||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaacgca 7349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 235 - 389
Target Start/End: Original strand, 25000112 - 25000266
Alignment:
Q  235 tcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctccc 334  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||| |||| ||||||| ||||||||||||  |||||||||| |||||||| |||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  335 attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||| | ||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 15709518 - 15709353
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||| | ||||||||    
T  15709518 tttttggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatt 15709420  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |  ||||||||||||||||||||||| ||||| |  ||||| || ||||||||||| ||||||||||    
T  15709419 tctgttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 215 - 338
Target Start/End: Original strand, 15371873 - 15371995
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  315 catttttcgtcctacctcccattt 338  Q
    |||||||||||| |||||| ||||    
T  15371972 catttttcgtcccacctcctattt 15371995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 214 - 339
Target Start/End: Complemental strand, 4222266 - 4222142
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||  ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  314 gcatttttcgtcctacctcccatttt 339  Q
    ||||||||||||||||| ||||||||    
T  4222166 gcatttttcgtcctacc-cccatttt 4222142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 213 - 353
Target Start/End: Original strand, 4623148 - 4623286
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||||||||  |||||||||||||||||||  |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacg 353  Q
     ||||||| ||||||||  |||||||||| |||||||||||    
T  4623248 ggcattttccgtcctac--cccattttatcctccaaaaacg 4623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 213 - 339
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||||||||||||  ||||||  |||||||||| ||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  313 tgcatttttcgtcctacctcccatttt 339  Q
    |||| ||||||||||||| ||||||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 219 - 351
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  219 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcat- 317  Q
    |||||| |||||||| || ||||||||| |||||||||||||| || ||| |||||||||||||||||||| ||| || |||||||||||| |||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  318 ttttcgtcctacctcccattttattctccaaaaa 351  Q
    |||||||||||||||||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 213 - 351
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   |||||| | |||||||||| ||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaa 351  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  4219763 tgcatttttcgtcctacc-cccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 330
Target Start/End: Original strand, 6018315 - 6018430
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||||||||| || ||||||||||||||||||||   | |||||||||||||||| |||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  314 gcatttttcgtcctacc 330  Q
    ||| |||| ||||||||    
T  6018414 gcagttttagtcctacc 6018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 226 - 352
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  226 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtc 325  Q
    |||| |||||||||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  || ||||||||||||||  |||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  326 ctacctcccattttattctccaaaaac 352  Q
    ||||| |||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 13814226 - 13814131
Alignment:
Q  264 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    |||||||||||||| ||||||||||| ||| |     |||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctacc-cccattttatcctccaaaaacgca 13814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 375
Target Start/End: Complemental strand, 41834606 - 41834443
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttc 310  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| | |  ||||||||| |||| | || |||||| |||     
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtttt 41834508  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 375  Q
     ||||| |||| ||||||||||| |||||   |||   |||||||||||||| ||||||||||||    
T  41834507 tttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  295 ttcaattatcattttcgttgcatttttcgtcctacctcccatttt 339  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 16752680 - 16752757
Alignment:
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||| |||| ||| ||||||| |||||   ||||| ||||||| |||||| | ||||||||||||||||||||||||    
T  16752680 ttgcagtttttgtcatacctcctattttcaactccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 15029857 - 15029804
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 264  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||| |||||    
T  15029857 taggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtc 15029804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 22651859 - 22651782
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 288  Q
    ||||||||||||||||||| |||||||  ||||| ||  ||||||||| |||| ||||| |||| |||  ||||||||    
T  22651859 taggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaa 22651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 24325637 - 24325580
Alignment:
Q  332 cccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| ||   ||||||||| |||||||||||| || ||||||||||    
T  24325637 cccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 28495288 - 28495211
Alignment:
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||| |||| ||||||||||| |||||   ||||| || ||||||||||| | ||||||||||||||| | ||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaactccagaaccgcagagaaatgatagttttagacctacctcatatgct 28495211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 15115641 - 15115585
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||| |||||   ||||| || |||||||||| |||||||    
T  15115641 ttaggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcct 15115585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 168; Significance: 6e-90; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 210 - 389
Target Start/End: Original strand, 4790 - 4969
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4890 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  315 catttttcgtcct 327  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 4e-88; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 39556122 - 39555946
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 211 - 389
Target Start/End: Complemental strand, 31779199 - 31779021
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  31779099 gttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 5136978 - 5137156
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 210 - 387
Target Start/End: Original strand, 20840557 - 20840734
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttt 20840656  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
     |||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  20840657 tgttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 23644461 - 23644638
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23644561 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 24301106 - 24300925
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| | |||||||    
T  24301106 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatt 24301007  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24301006 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 216 - 389
Target Start/End: Original strand, 41046703 - 41046876
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 37726928 - 37727105
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 215 - 389
Target Start/End: Complemental strand, 25853770 - 25853596
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||| || | |||||||||||||||||| |||||||||||||||||||| ||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 212 - 389
Target Start/End: Complemental strand, 27394123 - 27393946
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||| |    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27394023 ttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 208 - 389
Target Start/End: Original strand, 30104477 - 30104657
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  30104477 ttttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatt 30104576  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  30104577 tttgttgcatttttcgtcctacc-cccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 213 - 382
Target Start/End: Original strand, 43973441 - 43973610
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 208 - 387
Target Start/End: Complemental strand, 32535513 - 32535330
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32535513 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 32535414  T
Q  308 -----ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
         || |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  32535413 aaatttttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 210 - 368
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagt 368  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  48453086 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 26837905 - 26837725
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||||| |||||||    
T  26837905 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatt 26837807  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || ||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  26837806 tttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 217 - 389
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  217 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 316  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  317 tttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 43973990 - 43973824
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  43973990 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatt 43973891  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||||||||    
T  43973890 tttgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 37727480 - 37727314
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37727480 tttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatt 37727381  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  37727380 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 209 - 389
Target Start/End: Complemental strand, 26275115 - 26274936
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||| ||||||| | |||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  26275115 tttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcattt 26275016  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | ||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  26275015 ttgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 389
Target Start/End: Complemental strand, 17465038 - 17464860
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  312 ttgcat-ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||| |||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  17464938 ttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 20841107 - 20840945
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 373
Target Start/End: Original strand, 39555577 - 39555739
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||| |||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 213 - 373
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||| |||||||| ||||| |  ||||| |||||||||||||||||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 211 - 373
Target Start/End: Complemental strand, 4275911 - 4275748
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||     
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 29801965 - 29801798
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29801965 tttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 29801866  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 375  Q
    | |||||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| ||||||||    
T  29801865 ttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 373
Target Start/End: Original strand, 31778652 - 31778814
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 210 - 373
Target Start/End: Original strand, 17464488 - 17464652
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  310 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
     ||||||||||||||||||||||| ||||| |  ||||| ||||| | |||||| ||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 212 - 373
Target Start/End: Original strand, 27393660 - 27393822
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||| || ||||| |  | ||| |||||||||||||| ||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 210 - 373
Target Start/End: Complemental strand, 5137529 - 5137365
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  310 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
     ||||||||||| |||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 208 - 373
Target Start/End: Original strand, 22424809 - 22424975
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  22424809 ttttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatt 22424908  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||| ||||| |  ||||| ||| |||||||||| ||||||||||    
T  22424909 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 30098309 - 30098147
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  || || ||||||||||| || ||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 216 - 339
Target Start/End: Original strand, 32534962 - 32535085
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  316 atttttcgtcctacctcccatttt 339  Q
    |||||||||||||||||| |||||    
T  32535062 atttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 23645015 - 23644849
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  23645015 ttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatt 23644916  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || |||||||||||| |||||||||| ||||| |  ||| |  ||||||||||||| ||||||||||    
T  23644915 tttgttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 216 - 354
Target Start/End: Complemental strand, 25612519 - 25612381
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||| || |||||||||||| |||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacgc 25612381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 26837358 - 26837521
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||     
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 213 - 352
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  |||||||||||||||||||  |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaac 352  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 216 - 373
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||| ||||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||| ||||||| ||||| |  ||||| ||||||||  |||| ||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 213 - 330
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  313 tgcatttttcgtcctacc 330  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 373
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||| |||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    | ||||||||| |||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 213 - 355
Target Start/End: Complemental strand, 50116954 - 50116812
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| ||||| ||||||||| ||| |||||||||||||| |||| |||||||||| ||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    |||| ||||||||||||| |||||||| | |||||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaacgca 50116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 214 - 353
Target Start/End: Complemental strand, 32697244 - 32697106
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| | |||  ||||||||||||||||||||||  || |||||||||||||||| |||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  314 gcatttttcgtcctacctcccattttattctccaaaaacg 353  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  32697144 gcatttttcgtcctacc-cccattttatcctccaaaaacg 32697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 51474884 - 51474737
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  |||||| | ||||||||    
T  51474884 ttttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatt 51474785  T
Q  308 ttcgttgcatttttcgtcctacctccca-ttttattctccaaaaacgc 354  Q
    || |||||||||||||||||||| || | |||||| ||||||||||||    
T  51474784 tttgttgcatttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||| | || || |||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||||||||||||| |||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 211 - 354
Target Start/End: Original strand, 37220555 - 37220698
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |  | || ||| |||||||||||||| ||||  |||||||| ||||||||||     
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    |||||| |||||||||||||  ||||||||| ||||||||||||    
T  37220655 gttgcacttttcgtcctaccctccattttatcctccaaaaacgc 37220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 214 - 327
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||  |||||||  |||||||||| |||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  314 gcatttttcgtcct 327  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 211 - 351
Target Start/End: Original strand, 45965936 - 45966076
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  |  |||||| ||||||||||| |||||||  ||||||| ||||||||||      
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaa 351  Q
    |||||||||||||| ||| | |||||||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 357
Target Start/End: Complemental strand, 25420684 - 25420542
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||| || |||| ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  ||||||||||||| ||||| ||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcaga 357  Q
    ||||||||||| |||| |||||||||| || |||||| |||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 37222118 - 37222030
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 299  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||  ||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 25419139 - 25419241
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc-ttcaattatcat 306  Q
    ||||| |||| |||| |||||||||| ||||||||| || ||||||||||| | || ||||||||||||||||||||||||| |||| ||||||||||||    
T  25419139 ttttaagcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcat 25419238  T
Q  307 ttt 309  Q
    |||    
T  25419239 ttt 25419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 232 - 341
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  232 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacct 331  Q
    ||||| |||||| | |||||||||||| |||| | ||||||||||||||||||||||  ||  ||||||||||||||| ||||||||||||||||| ||     
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  332 cccattttat 341  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 209 - 390
Target Start/End: Original strand, 49407792 - 49407972
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| |||||||||| |||| | || | |   ||    
T  49407792 tttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgtt 49407891  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgcta 390  Q
    | ||  || |||| ||| ||||||| |||||   |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  49407892 ttgta-cagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 389
Target Start/End: Complemental strand, 27200240 - 27200062
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||||||||||||||||| |  ||||| ||  ||||||||| |||| |||||  ||| |||  |||||| || |||||  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
      ||||| |||| ||| ||||||| |||||   ||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 355
Target Start/End: Original strand, 23227261 - 23227398
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||| ||||| ||||||||||   |||||||||| ||||||||||| |||||||       | ||||||||||||   ||||| ||||| ||||||| |    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    |||||||||||||||| |  |||||||||| |||||||||||||    
T  23227355 ttgcatttttcgtccttctccccattttatcctccaaaaacgca 23227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 389
Target Start/End: Complemental strand, 50901077 - 50900898
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||||||||||||||||||  ||||| ||  ||||| ||| ||| ||||||  ||  |||  ||||||||| |||| | || ||| || |    
T  50901077 tttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgt 50900979  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |  ||||| |||| ||||||||||| |||||   ||||| ||||||| ||||||  |||||||||| ||||||||||||||    
T  50900978 tttttgcagtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgct 50900898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 55192222 - 55192293
Alignment:
Q  318 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||| ||||||||||| |||||   ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 389
Target Start/End: Original strand, 37075676 - 37075864
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaatt 301  Q
    |||| ||||| ||||||||||||||||||||  ||  ||||| || |||||||||| |||||||||| |||| ||| || |||||| | |||| | || |    
T  37075676 attttttttatgcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatca-aacaaacccgtccctaaact 37075774  T
Q  302 atca--ttttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||    ||||  ||||| |||| ||||||||||  |||||   ||||| |||||||||||||| || |||||||||||||||||||||||    
T  37075775 atatgtttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 327
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||| ||||||||||| | |||||||||||| |||||| || |  || | ||||||||||||||||||  ||||| | ||||| ||||| |||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  316 atttttcgtcct 327  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 52375880 - 52375824
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 51827956 - 51828133
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct-gcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||| | || ||| || ||     
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgttt 51828053  T
Q  311 gttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     |||||||||| |||||| ||||| |||||   ||||| ||||||| | |||| |||||||||| || ||| ||||||||    
T  51828054 tttgcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 27199700 - 27199878
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| ||||||||| ||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||  | || |||   |||     
T  27199700 taggtttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatgtttt 27199799  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     ||||| |||| || |||| ||| |||||   ||| | ||||||||| ||||| |||||||||||||||||||||||||    
T  27199800 tttgcagttttagtgctacatcctattttcaactctagaaacgcagataaatatcagttttagacctaccccctatgct 27199878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 29801535 - 29801592
Alignment:
Q  332 cccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||| |||||| |||||||||| |||||||||||| |||| | ||||||    
T  29801535 cccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 22370599 - 22370671
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 288  Q
    ||||||||||||||||||||||  ||||| || |||||||||| ||||||| || |||| ||||  |||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaa 22370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 330383 - 330329
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||| |||||||||||  ||||| || |||||||||| |||||||    
T  330383 aggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcct 330329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 55390148 - 55390090
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||||||||  ||||  || | |||||||| |||||||    
T  55390148 ttttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcct 55390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 40275093 - 40275146
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 40275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 2051292 - 2051348
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  2051292 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 2051348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 25611497 - 25611529
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttg 244  Q
    ||||||||||||||||||| |||||||||||||    
T  25611497 aggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 49720908 - 49720856
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 264  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  49720908 aggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 49720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 52237366 - 52237310
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||| ||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  52237366 ttagccttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 52237310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 2e-86; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 212 - 389
Target Start/End: Complemental strand, 50970824 - 50970647
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 18984117 - 18984295
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  18984217 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 212 - 382
Target Start/End: Complemental strand, 5540364 - 5540194
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 29869619 - 29869796
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 212 - 382
Target Start/End: Complemental strand, 15646741 - 15646571
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 215 - 389
Target Start/End: Complemental strand, 33144462 - 33144288
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 216 - 389
Target Start/End: Original strand, 15173099 - 15173272
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| |||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 213 - 382
Target Start/End: Original strand, 29306953 - 29307122
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 8679086 - 8678911
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  8678986 tgcatttttcgtcctacct-ccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 216 - 389
Target Start/End: Complemental strand, 5963120 - 5962947
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||| ||||||||||||||| |||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 209 - 389
Target Start/End: Original strand, 9018969 - 9019149
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  9018969 tttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcattt 9019068  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||    
T  9019069 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 21856588 - 21856412
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 17433216 - 17433392
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 211 - 387
Target Start/End: Complemental strand, 26859606 - 26859431
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||     
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  26859506 gttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 213 - 382
Target Start/End: Complemental strand, 29307487 - 29307317
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| |||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 39154021 - 39154195
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||| | ||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 209 - 382
Target Start/End: Complemental strand, 9019512 - 9019338
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  9019512 tttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcattt 9019413  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    | ||||||||||||||||||||||| ||||| |  | ||| ||||||||||||||||||||||||||||| ||||    
T  9019412 ttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 215 - 375
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  315 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 375  Q
    ||||||||||||||||||| ||||| |  || || |||||||||||||| ||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 211 - 371
Target Start/End: Original strand, 50970276 - 50970437
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttt 371  Q
    ||||||||||||||||||||| | ||||| |  ||||| |||||||||||||| ||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 29870169 - 29870003
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29870169 tttttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatt 29870070  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||| ||||| |  ||  | |||||||||||||| ||||||||||    
T  29870069 tttgttgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 18984671 - 18984538
Alignment:
Q  206 tcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 305  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18984671 tctttaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 18984572  T
Q  306 ttttcgttgcatttttcgtcctacctcccatttt 339  Q
    |||| ||||||||||||||||||||||| |||||    
T  18984571 tttttgttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 209 - 373
Target Start/End: Original strand, 21856038 - 21856203
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 21856137  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    | |||||||||||| ||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  21856138 ttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 214 - 373
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  314 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    | |||||||||||||||||| ||||| |  ||||| ||||||| ||||||  |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 214 - 373
Target Start/End: Original strand, 8678542 - 8678702
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  314 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||| | ||||| |  || || ||||||| |||||| ||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttag 8678702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 214 - 372
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  314 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 372  Q
    ||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 211 - 373
Target Start/End: Complemental strand, 15173640 - 15173478
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||     
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 208 - 373
Target Start/End: Original strand, 26859054 - 26859220
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26859054 tttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatt 26859153  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||  ||||| |  ||||| |||||||||||| ||| ||||||||    
T  26859154 tttgttgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttag 26859220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 39154566 - 39154404
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  || || |||||||||||||| ||| ||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 221 - 373
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  221 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttt 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  321 tcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 15646190 - 15646353
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||     
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||||  ||||| |  ||||| ||| |||||||||| ||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 212 - 353
Target Start/End: Original strand, 52268289 - 52268430
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||| |    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacg 353  Q
    ||||| ||||||||||||| |||||||| | |||||||||||    
T  52268389 ttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 214 - 373
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  314 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||| |||||||| ||||| |  ||||| |||| ||||| ||| ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  273 ttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttta 372  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  373 gacctaccccctatg 387  Q
    |||||||||||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 208 - 299
Target Start/End: Complemental strand, 2733507 - 2733416
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 299  Q
    ||||||||||||||| |||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2733507 ttttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||||||||||| | |||||| ||||  ||| ||||||||||||||||||||||||  ||| |||| |||||||||| ||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  315 catttttcgtcctac 329  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 373
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  |||||||||||||||||||  |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||| ||||| |  ||||| ||||||||| |||| | ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 288  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 47827125 - 47827037
Alignment:
Q  221 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||| ||  | ||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| ||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttt 47827037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 44802728 - 44802555
Alignment:
Q  202 catttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 301  Q
    ||||| |||||||||||||||||||||||||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||| ||||||||  |||| | || |    
T  44802728 cattttttttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaact 44802629  T
Q  302 atcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 375  Q
    ||||| ||  ||||| |||| || |||||||| |||||   ||||| |||| |||| |||| ||| ||||||||    
T  44802628 atcatgttttttgcagttttagttctacctcctattttcaactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 294  Q
    ||||||||| ||||||||||| |||  ||| | || |||||||||| |||||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 383
Target Start/End: Complemental strand, 17088688 - 17088516
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||||||||||||||||   |||||  |  ||||||||| ||||| |||| |||| ||| || |||||||| |||| | || ||| || |    
T  17088688 ttaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatca-aacaaaaccgtccctaaactat-atat 17088591  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccc 383  Q
    |  ||||| |||| || |||||||| |||||    || | |||||||||||||| ||||||||||||||||||||    
T  17088590 tttttgcagttttagttctacctcctattttcaaatctagaaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 45048253 - 45048330
Alignment:
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||| |||| ||||||||||  |||||   ||||| ||||||| ||||||||||||||||||| ||||| |||||||    
T  45048253 ttgcagttttagtcctacctcatattttcaactccagaaacgcatagaaataacagttttagacttaccctctatgct 45048330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 52235216 - 52235153
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctttt 274  Q
    |||||||||||||||||||| |||||   ||||  || ||||||||||||| ||||||||||||    
T  52235216 taggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgccctttt 52235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 29438929 - 29438983
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  29438929 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 29438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 17088249 - 17088326
Alignment:
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||| |||| ||||||||||| |||||   || || ||| ||||||||||  |||||||||||||||| ||||||||    
T  17088249 ttgcaattttagtcctacctcctattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 50304441 - 50304490
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 264  Q
    |||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 50304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 17641912 - 17641864
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 264  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 17641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 19830418 - 19830596
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 37786766 - 37786943
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 19590525 - 19590701
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 211 - 387
Target Start/End: Complemental strand, 35289448 - 35289272
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  35289348 gttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 216 - 389
Target Start/End: Complemental strand, 29100393 - 29100220
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 38858642 - 38858819
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  38858742 ttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 213 - 387
Target Start/End: Complemental strand, 32005159 - 32004985
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 210 - 387
Target Start/End: Complemental strand, 2659388 - 2659211
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
     |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 211 - 387
Target Start/End: Complemental strand, 34534338 - 34534162
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||     
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||    
T  34534238 gttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 19591075 - 19590909
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19591075 ttttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 19590976  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  19590975 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 216 - 389
Target Start/End: Original strand, 4641443 - 4641616
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||| |||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 219 - 382
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  219 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 318  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  319 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 211 - 382
Target Start/End: Complemental strand, 4478247 - 4478076
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||     
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    ||||||||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4478147 gttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 38859191 - 38859025
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  38859191 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatt 38859092  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  38859091 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 203 - 371
Target Start/End: Complemental strand, 37787322 - 37787153
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 302  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  37787322 atttattttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaatta 37787223  T
Q  303 tcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttt 371  Q
    ||||||| ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||    
T  37787222 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 2658837 - 2659000
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||| ||||||| ||||| |  ||||||||||||||||||||  |||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 211 - 372
Target Start/End: Original strand, 32004612 - 32004774
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||     
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 372  Q
    ||||||||||||| ||||||||| ||||| |  ||||| |||||||||||||| |||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 34533789 - 34533952
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||| |||||||||||||||     
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||| |||||||||||| ||||| |  |||||||||||||||||||| ||| ||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 213 - 372
Target Start/End: Original strand, 35288903 - 35289063
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 372  Q
    ||||||||||||||||| ||  ||||| |  ||||| |||| ||||||||| |||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 19830965 - 19830804
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 209 - 355
Target Start/End: Original strand, 38160947 - 38161093
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||| ||||    
T  38160947 tttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattattt 38161046  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    | |||||||||||||||||||  |||||||||| |||||||||||||    
T  38161047 ttgttgcatttttcgtcctactccccattttatcctccaaaaacgca 38161093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 210 - 373
Target Start/End: Original strand, 23952727 - 23952892
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    | ||||||||||||||||||||| | ||||| |  | ||| |||||||||||||| | ||||||||    
T  23952827 tggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 226 - 339
Target Start/End: Original strand, 29099863 - 29099976
Alignment:
Q  226 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtc 325  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  326 ctacctcccatttt 339  Q
    |||||||| |||||    
T  29099963 ctacctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||| ||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 211 - 351
Target Start/End: Original strand, 28583437 - 28583577
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||| || ||||| |||||||||||||||||||     
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaa 351  Q
     ||||||||||||||||||| |||||||||| |||||||||    
T  28583537 attgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 214 - 354
Target Start/End: Complemental strand, 28584466 - 28584326
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||||||  ||||||||||||||||||| |||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  314 gcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    | |||||||||| |||| |||||||||| ||||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacgc 28584326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 35579333 - 35579256
Alignment:
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||| |||| ||| ||||||| |||||   ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  35579333 ttgcagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 39137080 - 39137014
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaa 277  Q
    ||||||||||||||||||| ||||||| ||||| ||  ||||||||| |||||||||| ||||||||    
T  39137080 aggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 389
Target Start/End: Original strand, 35578902 - 35579074
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||| | |  ||||| ||  ||||| ||| ||||||||||  ||| |||  ||||||||| ||| |  || |||||| ||  ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcata-aactatcatgttttttgc 35579000  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | ||||  |||||| ||| |||||   ||||| |||||||||||||| ||| ||||||||||| ||||||||||    
T  35579001 agttttaatcctacatcctattttcaactccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 389
Target Start/End: Original strand, 7732478 - 7732664
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaatt 301  Q
    |||| ||||||||||||||||| |||||||||| |  |||||  | |||||||||| ||||||| || |||||||| | ||||||||  |||||| || |    
T  7732478 attttttttaggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccttaaact 7732576  T
Q  302 atcattttcgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || || ||  ||||| |||| |||||| ||||| |||||   ||||| ||||||| | |||| |||||||||| || ||| ||||||||    
T  7732577 at-atgttttttgcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgct 7732664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 32427461 - 32427397
Alignment:
Q  318 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    |||| ||||| ||||| |||||   ||| |||||||||||||||| |||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaactctaaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 34595319 - 34595263
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 268  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| |||||||||    
T  34595319 aggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgc 34595263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 49064033 - 49064109
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 288  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||||||| ||||  ||||  ||| ||| |||||||||    
T  49064033 aggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaa 49064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 787334 - 787279
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||| ||||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  787334 taggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcct 787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 9181534 - 9181708
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| |||||  |||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttg 9181632  T
Q  315 catttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||| |||||| ||||| ||||    ||||| ||||||| |||||| |||||||||| || ||| ||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 27245194 - 27245256
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||| ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  27245194 atttctttt-ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 27245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 26048492 - 26048439
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||| |||| | |||||| || |||||||||| |||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcct 26048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 48247583 - 48247640
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||||| |  |||||  | |||||||||| |||||||    
T  48247583 tttaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcct 48247640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 16917708 - 16917764
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 264  Q
    ||||||||||||||||||||||||||||    ||||| || |||||||||| |||||    
T  16917708 ttttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtc 16917764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 20741098 - 20741276
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||     
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 10900480 - 10900299
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10900480 tttttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatt 10900381  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10900380 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 212 - 389
Target Start/End: Complemental strand, 15828187 - 15828010
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||| |    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828087 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 18257135 - 18257313
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  18257235 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 213 - 389
Target Start/End: Complemental strand, 11277127 - 11276951
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 209 - 389
Target Start/End: Original strand, 28472633 - 28472812
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  28472633 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattt 28472732  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28472733 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 209 - 389
Target Start/End: Original strand, 29859822 - 29860001
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  29859822 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattt 29859921  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29859922 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 208 - 389
Target Start/End: Original strand, 11444982 - 11445163
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  11444982 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatt 11445081  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || ||||||||||||||||||||  ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  11445082 tttgttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 211 - 387
Target Start/End: Complemental strand, 12935704 - 12935528
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||     
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    ||| |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 209 - 389
Target Start/End: Complemental strand, 31470865 - 31470685
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31470766  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  31470765 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 213 - 387
Target Start/End: Complemental strand, 1149977 - 1149802
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  313 tgcatttttcgtcctacctcccattttattctcca-aaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 210 - 373
Target Start/End: Original strand, 2319669 - 2319832
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 373  Q
     |||||||||||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  2319769 tgttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 210 - 373
Target Start/End: Original strand, 12935154 - 12935318
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  310 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 216 - 382
Target Start/End: Original strand, 10899942 - 10900109
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    |||||||||||||||||| ||||| |  ||||| |||||||||||||| |||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 209 - 373
Target Start/End: Complemental strand, 11445536 - 11445371
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11445536 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 11445437  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    | ||||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  11445436 ttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 209 - 373
Target Start/End: Complemental strand, 22219902 - 22219737
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 22219803  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    | |||||||||||||| |||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  22219802 ttgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 214 - 389
Target Start/End: Complemental strand, 18505463 - 18505288
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| |||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  314 gcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||| | ||| ||||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 23073998 - 23074164
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||            
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-------- 23074089  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23074090 ---catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 211 - 373
Target Start/End: Complemental strand, 23075675 - 23075512
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  311 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||| |||||||| | |||||  ||||||||| |||||||||| ||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 216 - 389
Target Start/End: Complemental strand, 2322760 - 2322588
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| | ||||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 213 - 376
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||  || |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacc 376  Q
    | ||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 216 - 339
Target Start/End: Original strand, 18504922 - 18505045
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  316 atttttcgtcctacctcccatttt 339  Q
    |||||||||||||||||| |||||    
T  18505022 atttttcgtcctacctcctatttt 18505045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 20741650 - 20741485
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca---ttt 308  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |  |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 212 - 373
Target Start/End: Original strand, 31470314 - 31470476
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||| ||||| |    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 212 - 382
Target Start/End: Original strand, 11276589 - 11276760
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||| ||| |||| |||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||| |    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    || ||||||||||||||||||| ||||| |  |||||||||||||||||||| |||||||||| ||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 213 - 332
Target Start/End: Complemental strand, 18257682 - 18257563
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  313 tgcatttttcgtcctacctc 332  Q
    | ||||||||||||||||||    
T  18257582 tacatttttcgtcctacctc 18257563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 215 - 355
Target Start/End: Original strand, 29033436 - 29033577
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  315 catttttcgtcctacctcccattttatt-ctccaaaaacgca 355  Q
    ||  |||| ||||||| |||||||| || |||||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 214 - 339
Target Start/End: Original strand, 15827639 - 15827766
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa--acggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||  |||||||||||| ||||||||| |    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  312 ttgcatttttcgtcctacctcccatttt 339  Q
    |||||||||||||||||||||| |||||    
T  15827739 ttgcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 18296135 - 18296285
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 302  Q
    |||| ||||||||||||||| | |||| |||||||||||||| | ||||||| ||| || |  |||||||||||||||||||||||| |||||||| |||    
T  18296135 attttttttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcattta 18296234  T
Q  303 tcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  18296235 tcatttttgttgcatttttcgtcctacc-cccattttatcctccaaaaacgc 18296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 301  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 213 - 339
Target Start/End: Complemental strand, 4811801 - 4811675
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||| || |||  ||||||||||||||||||||||||||||||||||||||| ||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  313 tgcatttttcgtcctacctcccatttt 339  Q
    |||||||||| || ||||||| |||||    
T  4811701 tgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||  |||||| |||||||||||| || ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  316 atttttcgtcctacctcccattttattctccaaa 349  Q
    ||||||||||||||| |||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 215 - 355
Target Start/End: Complemental strand, 29035180 - 29035040
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||| | |||||||||| ||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    |||||||||||| |||  ||||||| | |||||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacgca 29035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 388
Target Start/End: Complemental strand, 35163734 - 35163557
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatca-tttt 309  Q
    ||||||||||||||||||||||| ||  ||||| ||  ||||||||| |||| ||||| |||| ||| || |||||||  |||| | || |||   ||||    
T  35163734 aggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatca-aacaaaatcgtccctaaactatatgtttt 35163636  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgc 388  Q
      ||||| |||| ||||||||||| |||||   |||||||||| ||||||||| |||||||||| ||||||||||||||    
T  35163635 ttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 269  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 32836547 - 32836367
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| ||||||||||||||||| ||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| || ||| || | | ||     
T  32836547 tttttggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgt-atg 32836449  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||  ||||| |||| ||||||||| | |||||   || || ||||| |||||||||||||||||||||||||||| ||||||    
T  32836448 ttttttgcagttttagtcctaccttctattttcaacttcagaaacgaagagaaataacagttttagacctaccccttatgct 32836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 5121034 - 5120970
Alignment:
Q  194 agttctaacatttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 258  Q
    ||||||| ||||  |||||||||||||||||||||||||||| |  ||||| || ||||||||||    
T  5121034 agttctaccattcattttaggcttaattacacttttggtccttgcattttgaccaactcacgaaa 5120970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 211 - 387
Target Start/End: Original strand, 11090519 - 11090695
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 210 - 389
Target Start/End: Original strand, 239350 - 239528
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  239449 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 18451381 - 18451200
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  18451381 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatt 18451282  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18451281 tttgttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 40027139 - 40027316
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40027239 ttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 40815895 - 40815714
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  40815895 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatt 40815796  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  40815795 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 22374318 - 22374496
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||||| || |||||||    
T  22374418 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 26538096 - 26538273
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  26538196 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 208 - 387
Target Start/End: Original strand, 28616608 - 28616788
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28616608 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatt 28616707  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctcc-aaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    || |||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  28616708 tttgttgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 211 - 389
Target Start/End: Original strand, 1978106 - 1978284
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  1978206 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 213 - 389
Target Start/End: Original strand, 43058333 - 43058509
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 210 - 389
Target Start/End: Original strand, 3025463 - 3025641
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     |||||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  3025563 tgttgcatttttcgtcctacc-cccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 208 - 382
Target Start/End: Complemental strand, 26538629 - 26538454
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26538629 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatt 26538530  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    || |||||||||||||||||||| |||||||| |  | ||| |||||||||||||| |||||||||||||||||||    
T  26538529 tttgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 216 - 386
Target Start/End: Original strand, 14432145 - 14432315
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||| ||||||||| |||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctat 386  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 7446896 - 7446730
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446896 ttttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 7446797  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||| ||||| |  |||||||||||||||||||| ||||||||||    
T  7446796 tttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 8425902 - 8425736
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    |||||||||| |||| || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 373
Target Start/End: Original strand, 18450829 - 18450991
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||      
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 354
Target Start/End: Original strand, 20444748 - 20444890
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||    
T  20444848 ttgcagttttcgtcctaccccccattttatcctccaaaaacgc 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 211 - 373
Target Start/End: Complemental strand, 22374872 - 22374709
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||||| ||||| |  ||| | ||| |||||||||| ||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 215 - 373
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  315 catttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 387
Target Start/End: Original strand, 7446341 - 7446519
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||      
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacag----ttttagacctaccccctatg 387  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||    |||||||| |||||||||||    
T  7446441 ttgcatttttcgtcatacc-cccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 28617160 - 28616998
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||| ||||||| ||||| |  ||||| ||||||||||||||| |||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 209 - 373
Target Start/End: Complemental strand, 43058881 - 43058717
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  43058881 tttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcattt 43058782  T
Q  309 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    | ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  43058781 t-gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 20440586 - 20440436
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  20440586 atttcttttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagtta 20440487  T
Q  303 tcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||| |||||| ||||||||||| | |||| ||||| ||||||||||||    
T  20440486 tcatttttgttgcagttttcgtcctatccccca-tttatcctccaaaaacgc 20440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||| ||||| |  ||||| |||||||| |||||  |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 211 - 373
Target Start/End: Complemental strand, 11091067 - 11090904
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |     
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||| ||||||||||||| |||| ||||| |  ||||| ||||||||| |||| ||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 214 - 373
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  314 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||| ||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 211 - 339
Target Start/End: Complemental strand, 1978656 - 1978528
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||     
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  311 gttgcatttttcgtcctacctcccatttt 339  Q
    ||||||||||| ||||||||||| |||||    
T  1978556 gttgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 214 - 354
Target Start/End: Complemental strand, 35781207 - 35781067
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||| |||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  314 gcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||||||||||| | |||||||||| ||||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacgc 35781067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 213 - 354
Target Start/End: Original strand, 35779708 - 35779849
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||| ||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaacgc 35779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 211 - 331
Target Start/End: Complemental strand, 28847242 - 28847122
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||     
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  311 gttgcatttttcgtcctacct 331  Q
    |||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 208 - 372
Target Start/End: Complemental strand, 3026011 - 3025848
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |||    
T  3026011 tttttggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatt 3025914  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 372  Q
    || ||||||||||||||||||||||| ||||| |  ||||| ||| |||||||||| |||||||||    
T  3025913 tttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 207 - 373
Target Start/End: Complemental strand, 14432692 - 14432525
Alignment:
Q  207 cttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 306  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||| ||| |||||||||| ||    
T  14432692 cttttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattat 14432593  T
Q  307 tttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||| |||||||||||| |||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  14432592 ttttgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| | || |||||||||||||||||||||| |||||||||||||||  |||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 372  Q
    |||||||||||||||||| ||||| |  ||||| ||| |||||||||| |||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 215 - 354
Target Start/End: Original strand, 8972239 - 8972378
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||| ||||||||||||||| ||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    |||||||||| ||||| || ||||||| ||||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacgc 8972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 355
Target Start/End: Original strand, 15551501 - 15551641
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  |||||||| |||||||||| ||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    |||||||||||| |||  ||||||||| |||||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacgca 15551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 215 - 353
Target Start/End: Complemental strand, 15552596 - 15552459
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||  ||| ||||||||||||||| ||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacg 353  Q
     |||||||||||||||  |||||||   |||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacg 15552459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 389
Target Start/End: Complemental strand, 28143578 - 28143400
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||| |||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||||||  |||| | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
      ||||| |||| ||||||| ||| |||||   ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 371
Target Start/End: Complemental strand, 31797324 - 31797166
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||   ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||| | || ||| || ||      
T  31797324 aggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttt 31797226  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttt 371  Q
    ||||| |||| ||||||||||| |||||   ||| | |||||||||||||| ||||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 378
Target Start/End: Complemental strand, 14942394 - 14942225
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca--ttt 308  Q
    ||||||||||||||||||||||| |||  ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||  |||| | ||||||||  |||    
T  14942394 taggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttt 14942295  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 378  Q
    |  ||||| |||| ||||||| ||| |||||   ||||| ||| ||||||||||  ||||||||||||||    
T  14942294 tttttgcagttttagtcctacatcctattttcaactccagaaatgcagagaaatcgcagttttagaccta 14942225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 38007945 - 38008003
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  38007945 ttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 38008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 42192790 - 42192736
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  42192790 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 62952 - 63032
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 288  Q
    |||||||||||||||||||| |||||||    ||||| || |||||||||| ||||||| || ||||||||  ||||||||    
T  62952 ttttaggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaa 63032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 25336149 - 25336093
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  25336149 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 25336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 287  Q
    ||||||||||||||||||||||  ||||  || ||||| |||| || |||||||||||| |||| |||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 4355755 - 4355806
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 264  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||| |||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 20128288 - 20128107
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcat 306  Q
    |||||||||||||||||||||||||||| |  ||||  || |||||||||| ||||||| || |||||||| || |||||||  |||||| || ||| ||    
T  20128288 ttttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatca-aacaaaatcgtccttaaactat-at 20128191  T
Q  307 tttcgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     ||  ||||| |||| |||||| ||||| ||||    ||||| ||||||| | |||| |||||||||| || ||| ||||||||    
T  20128190 gttttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 20128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 43216265 - 43216202
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||| ||| |||||||||||||||||| ||||| | |||||| || |||||||||| |||||||    
T  43216265 atttatttcaggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcct 43216202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 42192235 - 42192293
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||| ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  42192235 tttttggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 42192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 6949990 - 6949937
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 6949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 33921162 - 33921105
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  33921162 tttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 33921105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 24140223 - 24140167
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||| ||||||  | ||| || |||||||||| |||||||    
T  24140223 ttaggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcct 24140167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 44220192 - 44220140
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 264  Q
    |||||||||||||||||| |||||||  ||||| || |||||||||| |||||    
T  44220192 aggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtc 44220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 208 - 389
Target Start/End: Complemental strand, 11153697 - 11153516
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  11153697 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatt 11153598  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11153597 tttgttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 210 - 389
Target Start/End: Original strand, 12234326 - 12234505
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 12234425  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12234426 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 211 - 383
Target Start/End: Complemental strand, 25447783 - 25447611
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccc 383  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25447683 gttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 202 - 389
Target Start/End: Original strand, 25937659 - 25937846
Alignment:
Q  202 catttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 301  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937659 catttattttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 25937758  T
Q  302 atcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||| ||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  25937759 atcatttttgttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 33109686 - 33109860
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  33109786 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 215 - 389
Target Start/End: Complemental strand, 46193948 - 46193774
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 212 - 389
Target Start/End: Complemental strand, 15523780 - 15523603
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| |    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 209 - 389
Target Start/End: Complemental strand, 22434725 - 22434547
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  22434725 tttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatcattt 22434627  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22434626 ttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 215 - 382
Target Start/End: Complemental strand, 38962362 - 38962195
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 4219559 - 4219733
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||| ||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 23494445 - 23494619
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||  |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 48526195 - 48526371
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  48526295 ttgcatttttcgtcctacc-cccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 208 - 389
Target Start/End: Original strand, 51020792 - 51020973
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||||||||||||||||||| ||||| |||||||||  | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51020792 ttttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatt 51020891  T
Q  308 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  51020892 tttgttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 216 - 389
Target Start/End: Complemental strand, 2118837 - 2118665
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||| |||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2118737 atttttcgtcctacc-cccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 212 - 389
Target Start/End: Complemental strand, 22170482 - 22170306
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||| |||||||||| |||||||||||| ||||||||||||||| |    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 213 - 375
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 375  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 208 - 373
Target Start/End: Original strand, 22434174 - 22434340
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434174 tttttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 22434273  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || |||| |||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  22434274 tttgttgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 211 - 389
Target Start/End: Complemental strand, 54995614 - 54995437
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||||||||     
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatcatttt- 54995516  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||| | |||||||||||||| ||||||||| |||||| | ||||||||||||||| ||||||||    
T  54995515 gttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 213 - 373
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 210 - 389
Target Start/End: Original strand, 45082429 - 45082606
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||| |||||||| ||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  310 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  45082528 tgttgcatttttcgtcctacc-cccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 4220109 - 4219943
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||||||    
T  4220109 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatt 4220010  T
Q  308 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    || ||||||||||||||||||||||| ||||| |  || ||||||||||||||||||||||||||||    
T  4220009 tttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 211 - 372
Target Start/End: Original strand, 15523233 - 15523395
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 372  Q
     |||||||||||||||||||||| ||||| |  ||| | |||||||||||||| |||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 213 - 373
Target Start/End: Complemental strand, 45082969 - 45082808
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 210 - 329
Target Start/End: Complemental strand, 23494991 - 23494872
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  310 cgttgcatttttcgtcctac 329  Q
     |||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 210 - 373
Target Start/End: Complemental strand, 20471059 - 20470895
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  310 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  20470959 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 213 - 373
Target Start/End: Complemental strand, 12234874 - 12234713
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||| ||||| |  | ||| ||| |||||||||| ||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 54995067 - 54995230
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||     
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||| | |||||||| ||||||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 211 - 339
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  311 gttgcatttttcgtcctacctcccatttt 339  Q
    ||||||||||||||||||||||| |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 211 - 362
Target Start/End: Complemental strand, 51021342 - 51021191
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt- 51021244  T
Q  311 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaat 362  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 51021191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 25938217 - 25938090
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  312 ttgcatttttcgtcctacctcccatttt 339  Q
    |||||||||| ||||||||||| |||||    
T  25938117 ttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 212 - 373
Target Start/End: Original strand, 11153145 - 11153307
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||| |    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  312 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||||||||||||||||||||| ||||| |  | ||| |||||||||||||| ||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 215 - 373
Target Start/End: Original strand, 2118295 - 2118454
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  315 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||| ||||| |  || || ||||||||||||||  |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttag 2118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 216 - 373
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||| |||||| ||||| |  ||||| ||||||||| ||||  |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 209 - 355
Target Start/End: Complemental strand, 20958408 - 20958264
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||    
T  20958408 tttacgcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcattt 20958309  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    | ||||||||||| |||||||| |||||||||| |||||||||||||    
T  20958308 ttgttgcattttt-gtcctacc-cccattttatcctccaaaaacgca 20958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 210 - 327
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  310 cgttgcatttttcgtcct 327  Q
     |||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  281 gaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 380  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  381 ccctatgct 389  Q
    |||||||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 230 - 373
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  230 ggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctac 329  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  330 ctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 214 - 354
Target Start/End: Complemental strand, 44892692 - 44892552
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  |||| |||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  314 gcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacgc 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 231 - 354
Target Start/End: Complemental strand, 43243807 - 43243685
Alignment:
Q  231 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacc 330  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||| ||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T
Q  331 tcccattttattctccaaaaacgc 354  Q
     |||||||||| ||||||||||||    
T  43243707 -cccattttatcctccaaaaacgc 43243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 211 - 354
Target Start/End: Original strand, 48293592 - 48293735
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |  ||||||||| |||||||  || ||||||||||||||||     
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    |||||||||||| |||| ||  ||||||||||||||||||||||    
T  48293692 gttgcatttttcatcctgccctccattttattctccaaaaacgc 48293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 211 - 355
Target Start/End: Complemental strand, 48713893 - 48713749
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||| ||||||||||||||  | |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||||||     
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    ||||||||||||||||| ||  ||||||||| |||||||||||||    
T  48713793 gttgcatttttcgtcctcccctccattttatcctccaaaaacgca 48713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 213 - 330
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||| | |||||||||||| ||||||||||||||| |    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  312 ttgcatttttcgtcctacc 330  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 211 - 349
Target Start/End: Original strand, 48708293 - 48708431
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||     
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaa 349  Q
    ||||||||| |  ||||||| | |||||||| |||||||    
T  48708393 gttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||| |||||||||| ||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   |||||||||||||||||| |||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  316 atttttcgtcctacctcccattttattctccaaa 349  Q
    ||||||||||||||| || ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 351
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  231 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacc 330  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  || |||||||||| ||||| ||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  331 tcccattttattctccaaaaa 351  Q
     |||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 213 - 354
Target Start/End: Complemental strand, 48295088 - 48294946
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||  ||| ||||||||||||||| ||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  313 tgcattttt-cgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||||| ||||||||| ||||||||||  |||||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaacgc 48294946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 213 - 349
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| ||||||||||  |||||| || |||||||  |||||| |||||| ||||| ||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  313 tgcatttttcgtcctacctcccattttattctccaaa 349  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 214 - 354
Target Start/End: Original strand, 44890518 - 44890658
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   ||||| ||||||  |||| |||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  314 gcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||||| || |||| |||||||||| ||| ||||||||    
T  44890618 gcatttttcatcataccccccattttatcctcaaaaaacgc 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 10258433 - 10258306
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||  ||||  ||  ||||||||||||||| |    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  312 ttgcatttttcgtcctacctcccatttt 339  Q
    ||||| |||| ||| |||| || |||||    
T  10258333 ttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 220 - 351
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  220 ttacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcattt 319  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||||||||||||||| ||| |||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  320 ttcgtcctacctcccattttattctccaaaaa 351  Q
    |||||| |||  |||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaa 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 354
Target Start/End: Original strand, 43242328 - 43242411
Alignment:
Q  271 ttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||  |||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacgc 43242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  322 cgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 17503973 - 17504149
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||| ||| ||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||| ||| |||||  || |||||| ||      
T  17503973 aggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtttt 17504071  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||| |||| ||||||||||| |||||   ||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  17504072 ttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 44220861 - 44220781
Alignment:
Q  274 taaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    |||||||||||||||  |||||||| |||||||||| ||| |||||||||| ||||| |  ||||||| ||||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 55189528 - 55189624
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||    
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttt 55189624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 35193406 - 35193483
Alignment:
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||| |||| |||||| |||| |||||   || || |||||||||||||| ||||||||||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaacttcagaaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  349 aaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 354
Target Start/End: Complemental strand, 30598065 - 30597925
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctg-cccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||| |||||||||||||||||||||||||| || ||||||| || |||| ||| | |||||||| | ||||||||  |||| | |||||| ||||| |    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||| |||| |||||| | || ||||||   |||||||||||    
T  30597967 ttgcacttttggtcctaacccctattttaacatccaaaaacgc 30597925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 55677505 - 55677451
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||||||||| || ||||| || |||||||||| |||||||    
T  55677505 aggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 12593574 - 12593518
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 264  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  12593574 ttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 44219377 - 44219428
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||||||||||||||||||||||| ||||  || |||||||||| |||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcct 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 45838537 - 45838600
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    |||| ||||||||||| |||||||||||||||| || ||||| || ||||||| || |||||||    
T  45838537 attttttttaggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcct 45838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 46737203 - 46737148
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  46737203 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 46737148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 33689825 - 33689882
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||||| |  ||||| || |||||| ||| |||||||    
T  33689825 tttaggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcct 33689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 389
Target Start/End: Complemental strand, 34789932 - 34789752
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||| ||||||||||||||||||||| |  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||| | || |||   ||    
T  34789932 ttagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaattgtccctaaactatatgtt 34789834  T
Q  309 tcgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |  ||||| |||| |||||| ||||| ||||    ||||||||||||| | |||| |||||||||| || ||| ||||||||    
T  34789833 tttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 389
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  356 gagaaataacagttttagacctaccccctatgct 389  Q
    ||||||| ||||||||||||||||||||||||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 41608964 - 41608908
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  41608964 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcct 41608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 153; Significance: 6e-81; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 211 - 387
Target Start/End: Original strand, 1665 - 1841
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||     
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 387  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 210 - 373
Target Start/End: Complemental strand, 2215 - 2051
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  310 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  2115 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 151; Significance: 9e-80; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 211 - 389
Target Start/End: Complemental strand, 4754 - 4576
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 310  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  311 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 252 - 373
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  252 cacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  351 acgcagagaaataacagttttag 373  Q
    | |||||||||| ||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 209 - 389
Target Start/End: Complemental strand, 134222 - 134042
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||| |||||    
T  134222 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacattt 134123  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  134122 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 755 - 928
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt-gttg 853  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 203 - 382
Target Start/End: Complemental strand, 1296 - 1116
Alignment:
Q  203 atttcttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 302  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1296 atttcattttggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 1197  T
Q  303 tcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    ||||||| ||||||| ||||||||||||||| ||||| |  | ||| ||||||||| ||||  |||||||||||| |||||    
T  1196 tcatttttgttgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 146; Significance: 8e-77; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 212 - 389
Target Start/End: Original strand, 64301 - 64478
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  64401 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 64847 - 64689
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||| || | ||||| |  ||||| ||||| ||| |||||||||||||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttag 64689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 389
Target Start/End: Complemental strand, 205911 - 205738
Alignment:
Q  215 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 314  Q
    ||||||||||||||| ||||||   ||||| || |||||||||| ||||||||||  ||| |||  ||||||||| |||| | || |||||| ||  |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  315 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    || |||| ||||||| ||| |||||   ||||||||||||||||||||  |||||||||||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 210884 - 210787
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 309  Q
    |||||||||||||||||||||||||   ||||| || ||||| |||| ||||||||||  ||| |||  ||||||||| |||| | || |||||||||    
T  210884 aggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatttt 210787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 209 - 389
Target Start/End: Complemental strand, 42707 - 42528
Alignment:
Q  209 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 308  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  42707 tttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcattt 42608  T
Q  309 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    | ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42607 ttgtttcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 216 - 382
Target Start/End: Original strand, 42172 - 42339
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  316 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 382  Q
    |||||| ||| ||||||| ||||| |  || || |||||||||||||| |||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 216 - 389
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||| ||||||||||||||||    
T  10314 atttttcgtcctacc-cccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 339
Target Start/End: Original strand, 9935 - 10057
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||| || ||||||||||| | ||||||||| |||||||||||||||| ||| ||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  316 atttttcgtcctacctcccatttt 339  Q
    | ||||| |||||||||| |||||    
T  10035 a-ttttcatcctacctcctatttt 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 232 - 389
Target Start/End: Original strand, 10640 - 10797
Alignment:
Q  232 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacct 331  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  332 cccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 389  Q
     ||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 213 - 373
Target Start/End: Complemental strand, 11168 - 11007
Alignment:
Q  213 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 312  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  313 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    ||||||||||||||||||||| ||||| |  ||| | ||||||||||||||  |||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttag 11007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 212 - 380
Target Start/End: Original strand, 18834 - 19001
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| |    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  312 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 380  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18934 ttgcatttttcatcctacc-cccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 19171 - 19070
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19171 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 19072  T
Q  308 tt 309  Q
    ||    
T  19071 tt 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 214 - 355
Target Start/End: Original strand, 568 - 709
Alignment:
Q  214 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 313  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||| |||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  314 gcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    | ||||||||||  ||||||||||| || |||||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacgca 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 28789 - 28662
Alignment:
Q  212 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 311  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  312 ttgcatttttcgtcctacctcccatttt 339  Q
    ||||| |||||||||| || ||||||||    
T  28689 ttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 9e-43; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  281 gaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 380  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  381 ccctatgct 389  Q
    |||||||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 230 - 373
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  230 ggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctac 329  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  330 ctcccatttt-attctccaaaaacgcagagaaataacagttttag 373  Q
    |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 354
Target Start/End: Complemental strand, 62000 - 61862
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||   || ||||| ||||||||| |||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  316 atttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    ||||||||||||||| |||||||| | ||||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacgc 61862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  211 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 287  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 454 - 589
Alignment:
Q  217 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 316  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  ||||||||||||||||||| ||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  317 tttttcgtcctacctcccattttattctccaaaaacgc 354  Q
    |||||||||||| | |||||||||| ||| ||||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacgc 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  216 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 315  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  316 a 316  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 7784 - 7691
Alignment:
Q  262 gtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 355  Q
    ||||| |||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||| || ||||||| |||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgca 7691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 46819 - 46761
Alignment:
Q  208 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 266  Q
    ||||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  46819 ttttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 46761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 58 - 30
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgt 238  Q
    |||||||||||||||||||||||||||||    
T  58 ttaggcttaattacacttttggtcctcgt 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0830 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 5380 - 5352
Alignment:
Q  210 ttaggcttaattacacttttggtcctcgt 238  Q
    |||||||||||||||||||||||||||||    
T  5380 ttaggcttaattacacttttggtcctcgt 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University