View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16471_low_36 (Length: 282)

Name: NF16471_low_36
Description: NF16471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16471_low_36
NF16471_low_36
[»] chr7 (41 HSPs)
chr7 (1-282)||(23191900-23192181)
chr7 (242-280)||(19992007-19992045)
chr7 (180-281)||(21880157-21880259)
chr7 (228-282)||(32308124-32308178)
chr7 (222-282)||(20549795-20549855)
chr7 (242-282)||(29787384-29787424)
chr7 (242-281)||(2424619-2424658)
chr7 (228-282)||(5548680-5548734)
chr7 (180-281)||(1401030-1401130)
chr7 (237-282)||(17851435-17851480)
chr7 (222-279)||(22868049-22868106)
chr7 (221-282)||(26733308-26733369)
chr7 (220-280)||(3721099-3721159)
chr7 (223-279)||(5835254-5835310)
chr7 (242-282)||(14729705-14729745)
chr7 (176-280)||(21864812-21864919)
chr7 (240-280)||(24339648-24339688)
chr7 (240-280)||(25481908-25481948)
chr7 (240-280)||(26033474-26033514)
chr7 (222-282)||(28155574-28155634)
chr7 (240-280)||(30813818-30813858)
chr7 (222-282)||(42720885-42720945)
chr7 (180-282)||(598212-598315)
chr7 (221-280)||(11061070-11061129)
chr7 (240-279)||(27945048-27945087)
chr7 (243-282)||(30731041-30731080)
chr7 (180-282)||(32287415-32287518)
chr7 (180-280)||(5409783-5409889)
chr7 (242-280)||(12289120-12289158)
chr7 (228-282)||(19206054-19206108)
chr7 (176-218)||(40131947-40131989)
chr7 (228-281)||(9482939-9482992)
chr7 (228-277)||(12843176-12843225)
chr7 (180-280)||(15680815-15680916)
chr7 (237-278)||(16341504-16341545)
chr7 (229-282)||(18035866-18035919)
chr7 (228-273)||(22602711-22602756)
chr7 (221-282)||(27093407-27093468)
chr7 (221-282)||(27184833-27184894)
chr7 (222-278)||(4909159-4909215)
chr7 (228-280)||(7328692-7328744)
[»] chr1 (55 HSPs)
chr1 (180-282)||(5898218-5898321)
chr1 (182-280)||(40181877-40181976)
chr1 (180-278)||(40258885-40258984)
chr1 (228-279)||(7918212-7918263)
chr1 (228-282)||(38503324-38503378)
chr1 (237-282)||(27471576-27471621)
chr1 (221-282)||(36878465-36878526)
chr1 (228-276)||(25361896-25361944)
chr1 (240-280)||(31015049-31015089)
chr1 (181-279)||(18190061-18190160)
chr1 (176-280)||(1486652-1486762)
chr1 (220-282)||(9709824-9709886)
chr1 (221-279)||(14332636-14332694)
chr1 (200-277)||(18337338-18337416)
chr1 (183-280)||(38078616-38078714)
chr1 (228-282)||(44482234-44482288)
chr1 (182-266)||(1815277-1815362)
chr1 (237-278)||(1864890-1864931)
chr1 (221-282)||(2896115-2896176)
chr1 (237-282)||(6427354-6427399)
chr1 (243-280)||(12443476-12443513)
chr1 (180-280)||(22515839-22515940)
chr1 (237-282)||(25098565-25098610)
chr1 (242-279)||(34298443-34298480)
chr1 (221-282)||(41877464-41877525)
chr1 (240-280)||(113305-113345)
chr1 (242-282)||(398780-398820)
chr1 (220-280)||(31672888-31672948)
chr1 (226-278)||(33351685-33351737)
chr1 (228-280)||(34712384-34712436)
chr1 (180-279)||(37598839-37598938)
chr1 (180-279)||(42359401-42359501)
chr1 (237-276)||(19324572-19324611)
chr1 (237-280)||(19562631-19562674)
chr1 (240-279)||(24577199-24577238)
chr1 (222-280)||(25452145-25452201)
chr1 (198-280)||(46348353-46348436)
chr1 (237-279)||(10233260-10233302)
chr1 (237-279)||(10572599-10572641)
chr1 (244-282)||(17831548-17831586)
chr1 (244-282)||(20157367-20157405)
chr1 (221-279)||(22881610-22881668)
chr1 (244-282)||(26238129-26238167)
chr1 (228-282)||(34371718-34371771)
chr1 (229-282)||(17754315-17754368)
chr1 (198-278)||(28674808-28674889)
chr1 (237-282)||(36906001-36906046)
chr1 (231-280)||(37055860-37055909)
chr1 (242-282)||(5376515-5376555)
chr1 (243-279)||(9828051-9828087)
chr1 (237-281)||(11605945-11605989)
chr1 (246-282)||(19909301-19909337)
chr1 (222-274)||(23636044-23636096)
chr1 (222-282)||(39953141-39953201)
chr1 (246-282)||(40285673-40285709)
[»] chr8 (34 HSPs)
chr8 (180-280)||(3025557-3025658)
chr8 (180-277)||(40332200-40332298)
chr8 (180-280)||(5813598-5813699)
chr8 (198-279)||(20679365-20679447)
chr8 (221-278)||(31557005-31557061)
chr8 (237-282)||(34897089-34897134)
chr8 (212-279)||(14134706-14134774)
chr8 (176-279)||(36450702-36450806)
chr8 (221-279)||(4948659-4948717)
chr8 (222-280)||(13844591-13844649)
chr8 (228-282)||(24362203-24362257)
chr8 (237-282)||(4611538-4611583)
chr8 (223-280)||(12606825-12606882)
chr8 (237-282)||(39954289-39954334)
chr8 (180-279)||(926740-926840)
chr8 (228-280)||(8343322-8343374)
chr8 (240-280)||(25566847-25566887)
chr8 (242-282)||(37283825-37283865)
chr8 (175-249)||(126294-126369)
chr8 (237-280)||(14731718-14731761)
chr8 (247-282)||(18067954-18067989)
chr8 (237-280)||(31236587-31236630)
chr8 (228-278)||(4786339-4786389)
chr8 (228-278)||(11927087-11927137)
chr8 (226-280)||(22197741-22197795)
chr8 (242-279)||(7658470-7658507)
chr8 (237-278)||(11803267-11803308)
chr8 (242-279)||(13203648-13203685)
chr8 (221-278)||(20873077-20873134)
chr8 (221-278)||(33405378-33405435)
chr8 (240-280)||(8342978-8343018)
chr8 (220-280)||(24613527-24613586)
chr8 (227-279)||(29447110-29447162)
chr8 (240-280)||(30077400-30077440)
[»] chr4 (36 HSPs)
chr4 (180-280)||(23292938-23293039)
chr4 (180-280)||(28964200-28964301)
chr4 (180-282)||(8423670-8423773)
chr4 (180-280)||(49431031-49431133)
chr4 (204-272)||(8402718-8402787)
chr4 (242-282)||(30982893-30982933)
chr4 (231-278)||(903930-903977)
chr4 (198-280)||(29205450-29205533)
chr4 (223-277)||(9996849-9996903)
chr4 (237-279)||(36635331-36635373)
chr4 (237-278)||(22440610-22440651)
chr4 (237-282)||(40613454-40613499)
chr4 (228-280)||(3947767-3947819)
chr4 (240-280)||(11596365-11596405)
chr4 (242-282)||(16189713-16189753)
chr4 (222-282)||(33950140-33950200)
chr4 (180-279)||(35157937-35158037)
chr4 (212-279)||(54580007-54580075)
chr4 (227-278)||(5775358-5775409)
chr4 (222-281)||(11135289-11135348)
chr4 (228-282)||(35723385-35723440)
chr4 (243-282)||(38148741-38148780)
chr4 (221-279)||(12797332-12797389)
chr4 (222-279)||(17425386-17425441)
chr4 (179-280)||(21945509-21945611)
chr4 (207-280)||(38846991-38847065)
chr4 (242-280)||(56257939-56257977)
chr4 (245-282)||(30522933-30522970)
chr4 (242-282)||(1747216-1747256)
chr4 (239-279)||(14465087-14465127)
chr4 (242-282)||(16184821-16184861)
chr4 (242-278)||(24343515-24343551)
chr4 (227-279)||(24613701-24613753)
chr4 (242-278)||(32910559-32910595)
chr4 (228-280)||(35952618-35952670)
chr4 (237-277)||(44796972-44797012)
[»] chr3 (46 HSPs)
chr3 (220-282)||(49505147-49505209)
chr3 (183-279)||(10954959-10955056)
chr3 (242-282)||(34307795-34307835)
chr3 (180-279)||(55401082-55401182)
chr3 (220-282)||(7928454-7928516)
chr3 (176-280)||(11251984-11252087)
chr3 (222-278)||(10268481-10268537)
chr3 (180-280)||(28918007-28918110)
chr3 (180-282)||(40993287-40993391)
chr3 (221-282)||(8383261-8383322)
chr3 (240-280)||(4987304-4987344)
chr3 (242-282)||(10690277-10690317)
chr3 (228-280)||(11313801-11313853)
chr3 (222-278)||(20691327-20691383)
chr3 (240-280)||(26508116-26508156)
chr3 (221-276)||(8789544-8789599)
chr3 (228-279)||(14209120-14209171)
chr3 (240-279)||(34910324-34910363)
chr3 (221-280)||(45451559-45451618)
chr3 (240-282)||(4990980-4991022)
chr3 (228-282)||(8039836-8039890)
chr3 (242-280)||(9624647-9624685)
chr3 (237-279)||(12704014-12704056)
chr3 (180-277)||(20503474-20503572)
chr3 (181-278)||(25775516-25775613)
chr3 (242-280)||(25948902-25948940)
chr3 (228-278)||(26290379-26290429)
chr3 (242-280)||(27277853-27277891)
chr3 (244-278)||(34189435-34189469)
chr3 (222-280)||(51206348-51206406)
chr3 (242-279)||(11493376-11493413)
chr3 (243-280)||(14979187-14979224)
chr3 (237-278)||(16192760-16192801)
chr3 (237-278)||(32804550-32804591)
chr3 (180-268)||(35222956-35223045)
chr3 (237-281)||(1438809-1438853)
chr3 (240-280)||(1509545-1509585)
chr3 (242-282)||(5407262-5407302)
chr3 (228-280)||(14832105-14832157)
chr3 (242-278)||(14840306-14840342)
chr3 (242-282)||(15812836-15812876)
chr3 (242-278)||(21211296-21211332)
chr3 (240-280)||(21256999-21257039)
chr3 (222-278)||(25093510-25093566)
chr3 (240-280)||(35994751-35994790)
chr3 (240-280)||(49651799-49651839)
[»] chr6 (47 HSPs)
chr6 (222-275)||(13360367-13360420)
chr6 (221-282)||(19040356-19040417)
chr6 (222-282)||(7265588-7265648)
chr6 (181-280)||(28152105-28152204)
chr6 (180-279)||(34595141-34595241)
chr6 (220-278)||(5732503-5732561)
chr6 (228-280)||(9025495-9025547)
chr6 (177-279)||(16833315-16833418)
chr6 (198-280)||(28715301-28715384)
chr6 (228-279)||(31384927-31384978)
chr6 (213-282)||(9658883-9658953)
chr6 (176-280)||(24645486-24645592)
chr6 (221-282)||(7377983-7378044)
chr6 (180-280)||(17841541-17841642)
chr6 (237-282)||(30866154-30866199)
chr6 (228-280)||(12696330-12696382)
chr6 (240-280)||(16766703-16766743)
chr6 (242-278)||(31579240-31579276)
chr6 (242-282)||(32511681-32511721)
chr6 (237-280)||(7086801-7086844)
chr6 (240-279)||(10770687-10770726)
chr6 (237-280)||(26562695-26562738)
chr6 (242-281)||(34073362-34073401)
chr6 (240-278)||(5970121-5970159)
chr6 (222-280)||(7977825-7977883)
chr6 (242-280)||(7996393-7996431)
chr6 (242-280)||(8022370-8022408)
chr6 (242-280)||(8805587-8805625)
chr6 (228-282)||(9027182-9027236)
chr6 (228-278)||(9617442-9617492)
chr6 (228-282)||(9629387-9629441)
chr6 (228-282)||(10294111-10294165)
chr6 (220-282)||(13851740-13851802)
chr6 (222-280)||(21924930-21924988)
chr6 (180-280)||(32978851-32978953)
chr6 (237-282)||(1532244-1532289)
chr6 (237-274)||(11591880-11591917)
chr6 (223-280)||(20370476-20370533)
chr6 (242-278)||(5462694-5462730)
chr6 (242-282)||(6665217-6665257)
chr6 (242-278)||(7569183-7569219)
chr6 (240-280)||(9107383-9107423)
chr6 (242-278)||(17341679-17341715)
chr6 (227-279)||(19044471-19044523)
chr6 (239-279)||(25096430-25096470)
chr6 (240-280)||(31959165-31959205)
chr6 (213-280)||(33001274-33001342)
[»] chr5 (30 HSPs)
chr5 (180-280)||(21191008-21191109)
chr5 (180-280)||(21576697-21576798)
chr5 (200-282)||(30502360-30502443)
chr5 (200-282)||(30542703-30542786)
chr5 (180-280)||(42893366-42893467)
chr5 (228-280)||(39698547-39698599)
chr5 (237-280)||(6471899-6471942)
chr5 (207-281)||(12927659-12927734)
chr5 (180-282)||(17593675-17593777)
chr5 (228-282)||(3966507-3966561)
chr5 (221-279)||(6247629-6247687)
chr5 (240-282)||(27932239-27932281)
chr5 (221-278)||(28588668-28588725)
chr5 (222-281)||(6326292-6326351)
chr5 (237-280)||(41091267-41091310)
chr5 (243-281)||(19438348-19438386)
chr5 (237-275)||(24273040-24273078)
chr5 (237-275)||(24389136-24389174)
chr5 (228-282)||(36838547-36838601)
chr5 (223-280)||(16203791-16203848)
chr5 (221-282)||(26312773-26312834)
chr5 (237-282)||(27144467-27144512)
chr5 (242-279)||(35017044-35017081)
chr5 (242-278)||(5467993-5468029)
chr5 (240-280)||(14674275-14674315)
chr5 (240-280)||(19579707-19579747)
chr5 (242-278)||(23016004-23016040)
chr5 (242-278)||(30098334-30098370)
chr5 (240-280)||(31084329-31084369)
chr5 (240-280)||(43001806-43001846)
[»] chr2 (35 HSPs)
chr2 (180-280)||(2438671-2438772)
chr2 (223-282)||(21091727-21091786)
chr2 (237-282)||(21616766-21616811)
chr2 (179-282)||(28677913-28678022)
chr2 (180-279)||(18840965-18841065)
chr2 (242-282)||(42832291-42832331)
chr2 (176-282)||(37411192-37411299)
chr2 (221-279)||(5367199-5367257)
chr2 (242-280)||(21782833-21782871)
chr2 (220-282)||(34691798-34691860)
chr2 (220-282)||(34714210-34714272)
chr2 (228-282)||(44860324-44860378)
chr2 (225-282)||(18276525-18276582)
chr2 (237-282)||(23718030-23718075)
chr2 (237-282)||(24105702-24105747)
chr2 (229-282)||(31808081-31808134)
chr2 (180-280)||(37558983-37559084)
chr2 (180-280)||(38117111-38117212)
chr2 (240-280)||(30717543-30717583)
chr2 (244-282)||(18889608-18889646)
chr2 (244-282)||(29970566-29970604)
chr2 (240-278)||(30404863-30404901)
chr2 (232-278)||(35449521-35449567)
chr2 (240-282)||(39323268-39323310)
chr2 (224-278)||(44605136-44605190)
chr2 (242-279)||(25846748-25846785)
chr2 (244-280)||(896217-896253)
chr2 (246-278)||(2331802-2331834)
chr2 (15-43)||(7203938-7203966)
chr2 (199-278)||(15972881-15972961)
chr2 (220-279)||(19536390-19536450)
chr2 (240-280)||(21374712-21374752)
chr2 (242-278)||(23921261-23921297)
chr2 (242-278)||(28412358-28412394)
chr2 (234-278)||(36281693-36281737)
[»] scaffold0652 (1 HSPs)
scaffold0652 (180-280)||(414-515)
[»] scaffold0223 (1 HSPs)
scaffold0223 (228-280)||(20178-20230)
[»] scaffold0049 (1 HSPs)
scaffold0049 (222-282)||(63777-63837)
[»] scaffold0004 (1 HSPs)
scaffold0004 (231-282)||(92811-92862)
[»] scaffold0361 (1 HSPs)
scaffold0361 (181-279)||(14537-14633)
[»] scaffold0123 (1 HSPs)
scaffold0123 (237-282)||(44535-44580)
[»] scaffold0103 (1 HSPs)
scaffold0103 (240-280)||(51817-51857)
[»] scaffold0044 (1 HSPs)
scaffold0044 (242-282)||(53184-53224)
[»] scaffold0020 (1 HSPs)
scaffold0020 (228-280)||(135313-135365)
[»] scaffold0008 (1 HSPs)
scaffold0008 (228-280)||(263373-263425)
[»] scaffold0306 (1 HSPs)
scaffold0306 (240-279)||(13407-13446)
[»] scaffold0152 (1 HSPs)
scaffold0152 (240-279)||(21881-21920)
[»] scaffold0036 (1 HSPs)
scaffold0036 (228-279)||(9748-9799)
[»] scaffold0136 (1 HSPs)
scaffold0136 (228-278)||(3850-3900)
[»] scaffold0053 (1 HSPs)
scaffold0053 (183-280)||(8804-8902)
[»] scaffold0027 (1 HSPs)
scaffold0027 (240-278)||(46690-46728)
[»] scaffold1528 (1 HSPs)
scaffold1528 (229-282)||(1039-1092)
[»] scaffold0018 (1 HSPs)
scaffold0018 (227-279)||(178818-178871)
[»] scaffold0066 (1 HSPs)
scaffold0066 (240-280)||(33376-33416)
[»] scaffold0050 (1 HSPs)
scaffold0050 (207-278)||(70286-70358)
[»] scaffold0022 (1 HSPs)
scaffold0022 (242-278)||(90851-90887)


Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 23192181 - 23191900
Alignment:
Q  1 cttcagattggagacgtgactgatgtccaacatgtgtcaatgcaccgatacaacagcacatgtagttacatttgaatactttagtttattaaattattaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23192181 cttcagattgaagacgtgactgatgtccaacatgtgtcaatgcaccgatacaacagcacatgtagttacatttgaatactttagtttattaaattattaa 23192082  T
Q  101 cagcatccgcgtgtctgcgtcaatgtttcatagattaacacaacaaattcaaaagaaatttatgaaacacagagtcacagacactcctccgattaaacgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23192081 cagcatccgcgtgtctgcgtcaatgtttcatagattaacacaacaaattcaaaagaaatgtatgaaacacagagtcacagacactcctccgattaaacgt 23191982  T
Q  201 gtccctgtgttggacacgtgcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23191981 gtccctgtgttggacacgtgcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 23191900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 19992045 - 19992007
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19992045 taattacactgaaatatgtgattttctcaaattattagc 19992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 21880259 - 21880157
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| ||| |||||  |||||||  |||| ||||| ||| |||||| ||||| || || ||||||||||||||| ||||| |||||||||||||||||    
T  21880259 gacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T
Q  279 gcg 281  Q
    |||    
T  21880159 gcg 21880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 32308178 - 32308124
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||| ||||  |||||||||||| |||||||||||||||||||||||||||    
T  32308178 gacactgacacatacaattacactgaattatgtgattttctcaaattattagcgg 32308124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 20549855 - 20549795
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| ||||| || |||| ||||||||||||| || ||||||||||||||||||||||||    
T  20549855 gtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcgg 20549795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 29787384 - 29787424
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcgg 29787424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 281
Target Start/End: Complemental strand, 2424658 - 2424619
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcg 281  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 5548734 - 5548680
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||| |||| ||||||||||||| ||| ||||||||||||||||| |||||    
T  5548734 gacactgacacatataattacactgaattatttgattttctcaaattatcagcgg 5548680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 1401130 - 1401030
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtgcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||||| |||||   |||||||  ||| ||||| || |||||| ||||| || || | ||||||||||||| ||||||| ||||||||||||||||    
T  1401130 gacactcctcagattaggtgtgtcccgatgtcggacatgt-cgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattag 1401032  T
Q  280 cg 281  Q
    ||    
T  1401031 cg 1401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 17851480 - 17851435
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||    
T  17851480 acatataattacactgaattatgtgattttctaaaattattagcgg 17851435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 22868106 - 22868049
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||| ||| ||||| |||| ||||||||||||| ||||||||||||||| ||||||||    
T  22868106 gtgtttgatactgacacatataattacactgaattatgtgattttctcatattattag 22868049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 26733369 - 26733308
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| ||||| || |||| |||||| |||||| ||||||||||| |||||||||||||||    
T  26733369 cgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcgg 26733308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 3721159 - 3721099
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||| ||||| || |||| |||||| ||| || |||||||||||||||||||||||||    
T  3721159 gcgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 5835310 - 5835254
Alignment:
Q  223 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||||| || |||| ||||||||||||| ||||| ||||||||||| ||||||    
T  5835310 tgtctgacaccgacacatataattacactgaattatgttattttctcaaactattag 5835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 14729745 - 14729705
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  14729745 taattacactgaattacgtgattttctcaaattattagcgg 14729705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 21864919 - 21864812
Alignment:
Q  176 cacagacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtga--ttttctcaaa 272  Q
    ||||||||||||||  |||| ||||||||| |||| ||||||||| |||||| ||||  || || |||||||||||| || ||| |||  |||| |||||    
T  21864919 cacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaa 21864820  T
Q  273 ttattagc 280  Q
    ||||||||    
T  21864819 ttattagc 21864812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 24339688 - 24339648
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  24339688 tgtaattacactgaattatgtgattttttcaaattattagc 24339648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 25481948 - 25481908
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  25481948 tgtaattacactgaattatgtgattttttcaaattattagc 25481908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 26033474 - 26033514
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  26033474 tgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 28155634 - 28155574
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| ||||| || || ||||||||||| ||| ||||| |||||||||||||||||||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcgg 28155574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 30813858 - 30813818
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  30813858 tgtaattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 42720885 - 42720945
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| |||||||| |||| |||||||| | || ||||||||||| |||||||||||||||    
T  42720885 gtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcgg 42720945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 598315 - 598212
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| ||| |||||  |||||||| |||| ||||||||| |||||||||||| || || |  ||||||| | || || |||||||||| |||||||||    
T  598315 gacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattatta 598216  T
Q  279 gcgg 282  Q
    ||||    
T  598215 gcgg 598212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 11061070 - 11061129
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||||| || || |||||||| ||| || ||||||||||| |||||||||||||    
T  11061070 cgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagc 11061129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 27945087 - 27945048
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  27945087 tgtaattacactgaattatgtaattttctcaaattattag 27945048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 30731080 - 30731041
Alignment:
Q  243 aattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcgg 30731041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 32287415 - 32287518
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||   ||||||| |||| |||||| || | |||| ||||| || |||| || || ||||||| ||||||||||||||| |||||||    
T  32287415 gacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattatta 32287514  T
Q  279 gcgg 282  Q
    ||||    
T  32287515 gcgg 32287518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 5409783 - 5409889
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacact-----gaaacatgtaattacactgaaatatgtgattttctcaaat 273  Q
    |||||||||| |||||  |||||||| |||| ||||||||| |||||| |||||      || || ||||||| ||||||| ||||||||||| ||||||    
T  5409783 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaat 5409882  T
Q  274 tattagc 280  Q
    |||||||    
T  5409883 tattagc 5409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 12289158 - 12289120
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  12289158 taattccactgaattatgtgattttctcaaattattagc 12289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 19206108 - 19206054
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| |||||| | |||| |||||||||||||||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcgg 19206054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 40131947 - 40131989
Alignment:
Q  176 cacagacactcctccgattaaacgtgtccctgtgttggacacg 218  Q
    |||||||||||||| ||||| |||||||||||||| |||||||    
T  40131947 cacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 9482992 - 9482939
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcg 281  Q
    ||||| || |||| ||||||||||||| | ||||||||||||||||||| ||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcg 9482939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 277
Target Start/End: Original strand, 12843176 - 12843225
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattatt 277  Q
    |||||||| ||||||||||||| |||| ||||| ||||| ||||||||||    
T  12843176 gacactgacacatgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 15680916 - 15680815
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||  |||| ||||||| | |||| ||||||||| |||||| ||||| || || | |||||||||| || ||||||||||| |  ||||||||    
T  15680916 gacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattatta 15680817  T
Q  279 gc 280  Q
    ||    
T  15680816 gc 15680815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 16341545 - 16341504
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  16341545 acatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 18035866 - 18035919
Alignment:
Q  229 acactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| |||||||||||| ||||| |||||||||| || ||||||| |||||    
T  18035866 acactgacacatgtaattacgctgaattatgtgatttcctaaaattatcagcgg 18035919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 22602711 - 22602756
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaat 273  Q
    ||||| || |||| ||||||||||||| ||||||||||||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 27093407 - 27093468
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| |||| ||  ||| |||||||||| || ||||||||||||| |||||||||||||    
T  27093407 cgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcgg 27093468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 27184894 - 27184833
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| |||| ||  ||| |||||||||| || ||||||||||||| |||||||||||||    
T  27184894 cgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcgg 27184833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 4909215 - 4909159
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||| |||||||| |||| | |||||| |||| ||||| |||||||||||||||||    
T  4909215 gtgtccgacactgacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 7328692 - 7328744
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| || |||| |||||||||| || ||||| |||||||||||||||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 5898218 - 5898321
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| ||||| ||||||||| |||||||||||||| |||||||||||| ||  ||| ||||||||||||| ||||||||||| ||| |||||||    
T  5898218 gacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattatta 5898317  T
Q  279 gcgg 282  Q
    ||||    
T  5898318 gcgg 5898321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 40181976 - 40181877
Alignment:
Q  182 cactcctccgattaaacgtgtccctgtgttggacacgtgc-gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| |||||  |||||||| |||| |||||||||  ||||| ||||| || |||| ||||||||||||| |||||||||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 40258885 - 40258984
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||||  |||| ||||| ||| |||||||||||| || || ||||||||||||||| ||||||||||| |||||||||||    
T  40258885 gacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 7918212 - 7918263
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 38503378 - 38503324
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| ||||||||||||||||| |||||||||||||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcgg 38503324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 27471576 - 27471621
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||    
T  27471576 acatgtaattacactgaattatgtgcttttctcaaattattagcgg 27471621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 36878526 - 36878465
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| ||||| || || | ||||||||||||| |||||||||||||||||||||||||||    
T  36878526 cgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcgg 36878465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 25361944 - 25361896
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattat 276  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 31015089 - 31015049
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  31015089 tgtaattacactgaattatgtgattttctcaaattattagc 31015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 18190061 - 18190160
Alignment:
Q  181 acactcctccgattaaacgtgtccctgtgttggacacgtgc-gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||| |||||   ||||||| |||| |||||||||  ||||||||||  || || ||||||||||||||| ||||| ||||| ||||||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 1486652 - 1486762
Alignment:
Q  176 cacagacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacact-----gaaacatgtaattacactgaaatatgtgattttctc 269  Q
    |||||||||||||| |||||  |||||||| |||| ||||||||| |||||| |||||      || || | ||||||||||||| ||||||||||| ||    
T  1486652 cacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttc 1486751  T
Q  270 aaattattagc 280  Q
    |||||||||||    
T  1486752 aaattattagc 1486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 9709886 - 9709824
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| ||||| || |||| ||||||||  ||| |||||||||||||||||||||||||||    
T  9709886 gcgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcgg 9709824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 14332636 - 14332694
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| ||||| || |||| |||||||||| || ||||||||||||||||||||||||    
T  14332636 cgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 18337416 - 18337338
Alignment:
Q  200 tgtccctgtgttggacacgtgc-gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatt 277  Q
    |||||| |||| |||||||||  ||||| ||||| || || ||||||||||||||| ||||||||||| ||||||||||    
T  18337416 tgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 280
Target Start/End: Original strand, 38078616 - 38078714
Alignment:
Q  183 actcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||| |||||  |||||||  |||||| ||| ||| |||||| ||||| || || |||||||||| |||| ||||||||||| |||||||||||||    
T  38078616 actcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagc 38078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 44482288 - 44482234
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| ||||||||||||| ||||||||||||||||||||| |||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 1815362 - 1815277
Alignment:
Q  182 cactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgatttt 266  Q
    |||||||| |||||  |||||||| |||| ||||| ||| |||||| ||||| || || ||||||||||||||| |||||||||||    
T  1815362 cactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgatttt 1815277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 1864890 - 1864931
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  1864890 acatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 2896115 - 2896176
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||||||| || | || ||  ||||||||| |||||||||||||||||||||||||||    
T  2896115 cgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcgg 2896176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 6427399 - 6427354
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| |||||||| |||| |||||||||||||||||||||||||||    
T  6427399 acatataattacattgaattatgtgattttctcaaattattagcgg 6427354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 12443476 - 12443513
Alignment:
Q  243 aattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||||| |||||||||||||||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagc 12443513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 22515839 - 22515940
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||| | |||| ||| | ||| |||||| ||||| || || |||||||||||| || ||||||||||| |||||||||||    
T  22515839 gacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22515938  T
Q  279 gc 280  Q
    ||    
T  22515939 gc 22515940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 25098565 - 25098610
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||    
T  25098565 acatataattacactgaattatgtgattttctcaaattatcagcgg 25098610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 34298480 - 34298443
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattag 34298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 41877464 - 41877525
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| ||||| || || |||||||||||| || ||||| |||||||||||||||||||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcgg 41877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 113345 - 113305
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  113345 tgtaattacactgaattatgtgattttttcaaattattagc 113305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 398780 - 398820
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| ||||||||||| |||||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcgg 398820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 280
Target Start/End: Original strand, 31672888 - 31672948
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||| ||||| || || ||||||||||||||| || |||||||| |||||||||||||    
T  31672888 gcgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagc 31672948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 33351737 - 33351685
Alignment:
Q  226 ctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||||||||||| ||| ||| | |||||||||||||||||    
T  33351737 ctgacactgacacatgtaattacaccgaagtattttattttctcaaattatta 33351685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 34712384 - 34712436
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| |||| |||||||||| || ||||| |||||||||||||||||||    
T  34712384 gacactgacacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 279
Target Start/End: Complemental strand, 37598938 - 37598839
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  ||||||||  ||| ||||||||| |||||| ||||| || || | ||||||||||||| | ||||||||| |||||||||||    
T  37598938 gacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattatta 37598840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 42359401 - 42359501
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||||| |||| ||||||  | | |||| ||||| || || ||||||||||||||| | ||||||||| |||||||||||    
T  42359401 gacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattatta 42359500  T
Q  279 g 279  Q
    |    
T  42359501 g 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 19324611 - 19324572
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattat 276  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  19324611 acatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 19562631 - 19562674
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||    
T  19562631 acatataattacactgaactatgagattttctcaaattattagc 19562674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 24577199 - 24577238
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  24577199 tgtaattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 25452145 - 25452201
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||| || ||||  |||||||||||| |||| ||||||||||||||||||||    
T  25452145 gtgtctgacaccgacacat--aattacactgaattatgagattttctcaaattattagc 25452201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 46348353 - 46348436
Alignment:
Q  198 cgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||| | |||| ||||||||| |||||| ||||| || || |||||||||||| || ||| ||||||| |||||||||||||    
T  46348353 cgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagc 46348436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 10233302 - 10233260
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||| ||||||||||||| |||||||||||||||| |||||||    
T  10233302 acatataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 10572599 - 10572641
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||    
T  10572599 acatttaattacaccgaattatgtgattttctcaaattattag 10572641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 17831548 - 17831586
Alignment:
Q  244 attacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcgg 17831586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 20157367 - 20157405
Alignment:
Q  244 attacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  20157367 attacactgaattatgtgattttctcacattattagcgg 20157405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 22881610 - 22881668
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| ||||| || || |||||||||||| || ||||||||||| ||||||||||||    
T  22881610 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 22881668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 26238129 - 26238167
Alignment:
Q  244 attacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  26238129 attacactgaattatgttattttctcaaattattagcgg 26238167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 34371771 - 34371718
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| ||||||||||||| |||||||||||||| ||||||||||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattttctc-aattattagcgg 34371718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 17754368 - 17754315
Alignment:
Q  229 acactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| |||| || |||||||||| ||||| ||||| |||||||||||||||    
T  17754368 acactgacacatatagttacactgaattatgtaattttttcaaattattagcgg 17754315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 28674889 - 28674808
Alignment:
Q  198 cgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| | |||||||||| ||| ||||||||||||  | | || |||||| |||||| ||||| |||||||||||||||||    
T  28674889 cgtgtctcagtgttggacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattatta 28674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 36906046 - 36906001
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||| ||||| ||||||||||||||| |||||||||||    
T  36906046 acatataattactctgaattatgtgattttctcagattattagcgg 36906001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 37055860 - 37055909
Alignment:
Q  231 actgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| || |||||||||||| || ||||| |||||||||||||||||||    
T  37055860 actgatacttgtaattacactaaattatgtaattttctcaaattattagc 37055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 5376515 - 5376555
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| ||||| ||||||| |||||||||||||    
T  5376515 taattacactgaattatgttattttcttaaattattagcgg 5376555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 9828087 - 9828051
Alignment:
Q  243 aattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  9828087 aattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 11605945 - 11605989
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcg 281  Q
    |||||||||| ||||||| ||| ||||||| ||||||||||||||    
T  11605945 acatgtaatttcactgaattatatgattttttcaaattattagcg 11605989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 19909337 - 19909301
Alignment:
Q  246 tacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||  |||||||||||||||||||||||||||    
T  19909337 tacactgagttatgtgattttctcaaattattagcgg 19909301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 23636044 - 23636096
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaatt 274  Q
    ||||||||||| || ||||  |||||||||||| ||||| |||||||||||||    
T  23636044 gtgtctgacaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 39953141 - 39953201
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| ||||| || ||||  ||||||||| || ||||||||||||| |||||||||||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcgg 39953201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 40285673 - 40285709
Alignment:
Q  246 tacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  40285673 tacactgaattatgcgattttctcaaattattagcgg 40285709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 3025658 - 3025557
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||| | ||||  |||||||| |||||| |||||||| || | ||||||||||||| |||||||||||||||||||||||    
T  3025658 gacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T
Q  279 gc 280  Q
    ||    
T  3025558 gc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 40332298 - 40332200
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatt 277  Q
    |||||||||| |||||  || ||||| |||| ||||||||| ||||||  |||| || || ||||||||||||||| ||||||||||||||||||||||    
T  40332298 gacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 5813699 - 5813598
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||| ||||  |||||||| |||| ||||||||| |||||| ||||| || || |||| ||||||| |||||||||| ||| |||||||||||    
T  5813699 gacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattatta 5813600  T
Q  279 gc 280  Q
    ||    
T  5813599 gc 5813598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 279
Target Start/End: Original strand, 20679365 - 20679447
Alignment:
Q  198 cgtgtccctgtgttggacacgtgc-gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||| |||| |||||||||  | ||||||||| || || | ||||||||||||| ||||||||||||||||||||||||    
T  20679365 cgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 31557061 - 31557005
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||    
T  31557061 cgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattatta 31557005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 34897134 - 34897089
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  34897134 acatataattacactgaattatgtgattttctcaaattattagcgg 34897089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 14134774 - 14134706
Alignment:
Q  212 ggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||| ||||| |||||| || | || ||||||||||||| ||||||||||||||||||||||||    
T  14134774 ggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 36450702 - 36450806
Alignment:
Q  176 cacagacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaatt 274  Q
    |||||||||||||| |||||  |||||||  |||| ||||||| | |||||| |||||  | || ||||||||||||||| | ||||||||| |||||||    
T  36450702 cacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaatt 36450801  T
Q  275 attag 279  Q
    |||||    
T  36450802 attag 36450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 4948717 - 4948659
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| ||||| || || ||||||||||||||| ||||||||||| ||||||||||||    
T  4948717 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 13844591 - 13844649
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| ||||| || |||| |||||||||| || |||||||||||||||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagc 13844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 24362203 - 24362257
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||| |||| ||||||||||||| ||||||||| |||||||||||||||||    
T  24362203 gacattgacacatataattacactgaattatgtgattctctcaaattattagcgg 24362257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 4611583 - 4611538
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcgg 4611538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 12606825 - 12606882
Alignment:
Q  223 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||| || |||| |||||||| |||| ||| |||||||||||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagc 12606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 39954289 - 39954334
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| |||||||||| || |||||||||||||||||||||||||||    
T  39954289 acatataattacactaaattatgtgattttctcaaattattagcgg 39954334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 926740 - 926840
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| ||| || | |||||| |||| ||||||||| || ||| ||||| || || | |||||||||||||  ||| ||||||||||||||||||    
T  926740 gacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaaattatta 926839  T
Q  279 g 279  Q
    |    
T  926840 g 926840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 8343374 - 8343322
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| || |||||||||||| || ||||||||||| |||||||||||||    
T  8343374 gacactgacacttgtaattacactaaattatgtgattttttcaaattattagc 8343322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 25566887 - 25566847
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  25566887 tgtaattacactgaattatgtgattttttcaaattattagc 25566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 37283825 - 37283865
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  37283825 taattacactgaattatgtgattttctcagattattagcgg 37283865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 126294 - 126369
Alignment:
Q  175 tcacagacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattaca 249  Q
    |||| |||||||||| |||||  |||||||| || ||||||||||| |||||| |||||||| |||| ||||||||    
T  126294 tcacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 14731761 - 14731718
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| |||||||||| || |||||||||||||||||||||||||    
T  14731761 acatataattacactaaattatgtgattttctcaaattattagc 14731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 247 - 282
Target Start/End: Original strand, 18067954 - 18067989
Alignment:
Q  247 acactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||| |||||||||||||||||||||||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcgg 18067989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 31236587 - 31236630
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| |||||||| |||| |||||||||||||||||||||||||    
T  31236587 acatataattacattgaattatgtgattttctcaaattattagc 31236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 4786339 - 4786389
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||| || |||| ||||||||||||| ||||||||||||| |||||||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 11927087 - 11927137
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||| || |||| ||||||||||||| ||||||||||| |||||||||||    
T  11927087 gacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 22197741 - 22197795
Alignment:
Q  226 ctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||| || |||||||||||| || ||||||| ||| |||||||||||||    
T  22197741 ctgacactgacacttgtaattacactaaattatgtgaatttttcaaattattagc 22197795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 7658507 - 7658470
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  7658507 taattacactgaattatgtaattttctcaaattattag 7658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 11803308 - 11803267
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| ||||||||||||| ||||||||||||| |||||||||    
T  11803308 acatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 13203685 - 13203648
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  13203685 taattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 20873134 - 20873077
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| ||||| || || |||||||||||| || ||||||||||| |||||||||||    
T  20873134 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 33405378 - 33405435
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| ||||| || |||| |||||||||| || |||||| ||||||||||||||||    
T  33405378 cgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 8343018 - 8342978
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||||| || ||||||||||| |||||||||||||    
T  8343018 tgtaattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 24613586 - 24613527
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||| ||||| || || |||||||||||| || ||||||||||| |||||||||||||    
T  24613586 gcgtgtccgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattagc 24613527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 29447110 - 29447162
Alignment:
Q  227 tgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| || || |||| ||||| |||| ||||||||||||||||||||||||    
T  29447110 tgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 29447162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 30077400 - 30077440
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| |||||||| || |||||||||||||    
T  30077400 tgtaattacactgaattatgtgatgttttcaaattattagc 30077440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 23292938 - 23293039
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||||| |||| ||||||||| |||||| ||||| || || |||||||| |||||| ||||||||||| |||||||||||    
T  23292938 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattatta 23293037  T
Q  279 gc 280  Q
    ||    
T  23293038 gc 23293039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 28964200 - 28964301
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||||| |||| ||| | ||| |||||| ||||| || || ||||||||||||||| ||||||||||| |||||||||||    
T  28964200 gacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T
Q  279 gc 280  Q
    ||    
T  28964300 gc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 8423670 - 8423773
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| |||||||||  |||||||| |||| |||||  || |||||| ||||| || |  | ||||||||||||| |||||||||||||||||||||||    
T  8423670 gacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattatta 8423769  T
Q  279 gcgg 282  Q
    ||||    
T  8423770 gcgg 8423773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 49431133 - 49431031
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtga-ttttctcaaattatt 277  Q
    |||||||||| ||| |  |||||||| |||||||||||||| |||||| ||||| || || | ||||||||||||| ||||||| |||| ||||||||||    
T  49431133 gacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattatt 49431034  T
Q  278 agc 280  Q
    |||    
T  49431033 agc 49431031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 8402718 - 8402787
Alignment:
Q  204 cctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaa 272  Q
    ||||||| ||||| ||| ||||||||||||||| |||| ||||||||||||| ||| |||||||||||||    
T  8402718 cctgtgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 30982893 - 30982933
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  30982893 taattacactgaaatatgtgattttctcaaatcattagcgg 30982933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 903977 - 903930
Alignment:
Q  231 actgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  903977 actgatacatataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 29205533 - 29205450
Alignment:
Q  198 cgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| |||| ||||| ||| ||||||  |||| || || ||||||||||||||| ||||||||||| |||||||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 9996903 - 9996849
Alignment:
Q  223 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatt 277  Q
    |||||||||| || |||| |||||| |||||| ||||||||||||||||||||||    
T  9996903 tgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 36635373 - 36635331
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  36635373 acatataattacactgaattatgtgattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 22440610 - 22440651
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  22440610 acatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 40613499 - 40613454
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||    
T  40613499 acatataattacactgaattatgtgattttctcaaaatattagcgg 40613454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 3947767 - 3947819
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| || ||||||||||||||| |||| |||||| |||||||||||||    
T  3947767 gacactgacacttgtaattacactgaattatgcgattttttcaaattattagc 3947819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 11596365 - 11596405
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  11596365 tgtaattacactgaattatgtgattttttcaaattattagc 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 16189753 - 16189713
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  16189753 taattacactgaattatgtgattttctcaaatttttagcgg 16189713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 33950200 - 33950140
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||| || |||| | |||||| | || |||||||||||||||||||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcgg 33950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 35157937 - 35158037
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| ||| |||||| ||||| || |||||||||| ||| |||||| ||||| || || | |||||||||| || |||||||||||  ||||||||||    
T  35157937 gacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattatta 35158036  T
Q  279 g 279  Q
    |    
T  35158037 g 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 54580007 - 54580075
Alignment:
Q  212 ggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||| |||||| ||||| || || | ||||||||||||| ||||||||||| ||||||||||||    
T  54580007 ggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 5775358 - 5775409
Alignment:
Q  227 tgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| || |||| |||||||||| || |||||||||||||||||||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 11135289 - 11135348
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcg 281  Q
    |||||||||| ||| ||||||||||| | |||| ||||| ||||||||||| ||||||||    
T  11135289 gtgtctgacagtgacacatgtaattatattgaattatgtaattttctcaaactattagcg 11135348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 35723385 - 35723440
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtg-attttctcaaattattagcgg 282  Q
    |||||||| |||| |||||||| |||| |||||| |||||||||||||||||||||    
T  35723385 gacactgacacatataattacattgaattatgtgtattttctcaaattattagcgg 35723440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 38148741 - 38148780
Alignment:
Q  243 aattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcgg 38148780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 12797332 - 12797389
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| ||||| || || ||||||||||||||| ||||||||||| ||||||||||||    
T  12797332 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattag 12797389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 17425386 - 17425441
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||| || ||||  |||||||||||| |||| |||||||||||||||||||    
T  17425386 gtgtctgacacagacacat--aattacactgaattatgcgattttctcaaattattag 17425441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 21945611 - 21945509
Alignment:
Q  179 agacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatt 277  Q
    ||||||||||| |||||  |||||  | |||| ||||| ||| | |||| ||||| || || ||||||||||||||| ||||| ||||| ||||||||||    
T  21945611 agacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 21945512  T
Q  278 agc 280  Q
    |||    
T  21945511 agc 21945509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 38846991 - 38847065
Alignment:
Q  207 gtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| ||||||||| ||| || |||||||| || |||||||||||||||  || ||||||| |||||||||||||    
T  38846991 gtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagc 38847065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 56257977 - 56257939
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  56257977 taattacactgaattatatgattttctcaaattattagc 56257939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 30522933 - 30522970
Alignment:
Q  245 ttacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  30522933 ttacactgaattatgtgattttctcaaataattagcgg 30522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 1747256 - 1747216
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| |||||| |||||||||||||||| ||||||||||    
T  1747256 taattaaactgaattatgtgattttctcaatttattagcgg 1747216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 14465087 - 14465127
Alignment:
Q  239 atgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||| |||| ||||||||||| ||||||||||||    
T  14465087 atgtaattacattgaattatgtgattttttcaaattattag 14465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 16184861 - 16184821
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| ||||||| | |||||||||||||||||||||||||    
T  16184861 taatttcactgaattgtgtgattttctcaaattattagcgg 16184821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 24343551 - 24343515
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  24343551 taattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 24613701 - 24613753
Alignment:
Q  227 tgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| || || |||| ||||| |||| ||||||||||||||||||||||||    
T  24613701 tgacaccgacacttgtacttacattgaattatgtgattttctcaaattattag 24613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 32910595 - 32910559
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  32910595 taattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 35952618 - 35952670
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| |||| |||||||| |||| ||| ||||||| |||||||||||||    
T  35952618 gacactgatacatataattacattgaattatatgattttatcaaattattagc 35952670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 44796972 - 44797012
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattatt 277  Q
    ||||||||||||| |||| ||||| ||||||||||||||||    
T  44796972 acatgtaattacattgaattatgttattttctcaaattatt 44797012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 49505147 - 49505209
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| |||||||| |||| |||||||||| || |||||||||||||||||||||||||||    
T  49505147 gcgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcgg 49505209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 10955056 - 10954959
Alignment:
Q  183 actcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||| |||||  |||||||| |||| ||||||||| |||||| ||||| || || ||| ||||||||||| ||||||||||| ||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattag 10954959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 34307795 - 34307835
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34307795 taattacactgaaatatgtgattttctcaaattattagcgg 34307835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 279
Target Start/End: Complemental strand, 55401182 - 55401082
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||| | |||| ||||||||| |||||| ||||| || || |||||||||||| || ||||||||||| |||||||||||    
T  55401182 gacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 55401083  T
Q  279 g 279  Q
    |    
T  55401082 g 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 7928516 - 7928454
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| ||||| || |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  7928516 gcgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcgg 7928454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 11252087 - 11251984
Alignment:
Q  176 cacagacactcctccgattaaacgtgtccctgtgttggacacgtgc-gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaatt 274  Q
    |||||||||||||| |||||  ||||| ||  ||  |||||||||  ||||||||||| || ||||  |||||||||||| |||||||||||||||||||    
T  11252087 cacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacat--aattacactgaattatgtgattttctcaaatt 11251990  T
Q  275 attagc 280  Q
    ||||||    
T  11251989 attagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 10268481 - 10268537
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||||||| || |||||||||||| || ||||||||||| |||||||||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattatta 10268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 28918110 - 28918007
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtct--gacactgaaacatgtaattacactgaaatatgtgattttctcaaattat 276  Q
    |||||||||  |||||  |||||||| |||| ||||||||| ||||||   ||||| || || ||||||||||||||| ||||||||||| |||||||||    
T  28918110 gacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 28918011  T
Q  277 tagc 280  Q
    ||||    
T  28918010 tagc 28918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 40993287 - 40993391
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtga-ttttctcaaattatt 277  Q
    |||||||||| |||||  |||||||| |||| ||||| ||| |||||| ||||| || |||| ||||||||||||| ||||||| |||| | ||||||||    
T  40993287 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattatt 40993386  T
Q  278 agcgg 282  Q
    |||||    
T  40993387 agcgg 40993391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 8383322 - 8383261
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| ||||| || || | ||||||||||||| ||| |||||||||||||||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcgg 8383261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 4987304 - 4987344
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  4987304 tgtaattacactgaattatgtgattttttcaaattattagc 4987344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 10690277 - 10690317
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  10690277 taattacactgaattatgtgattttctcagattattagcgg 10690317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 11313801 - 11313853
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||| | |||| |||||||||| || |||||||||||||||||||||||||    
T  11313801 gacactaacacatataattacactaaattatgtgattttctcaaattattagc 11313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 20691383 - 20691327
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||| || |||| | ||||||||||| ||||| |||||||||||||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 26508156 - 26508116
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  26508156 tgtaattacactgaattatgtgattttttcaaattattagc 26508116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 8789544 - 8789599
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattat 276  Q
    |||||| ||||| || |||| ||||||||| ||| |||||||||||||||||||||    
T  8789544 cgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 14209171 - 14209120
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||| || ||||||||||||||| ||||||||||| | ||||||||||    
T  14209171 gacactgacacttgtaattacactgaattatgtgattttttaaaattattag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 34910363 - 34910324
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  34910363 tgtaattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 45451618 - 45451559
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||| ||||| || |||| | |||| |||||| |||||||||||||||||||||||||    
T  45451618 cgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagc 45451559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 4990980 - 4991022
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||    
T  4990980 tgtaattacactgaattatgtaattttctcaaactattagcgg 4991022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 8039836 - 8039890
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| ||||||||||||| ||| | |||||||||||||||||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttctcaaattattagcgg 8039890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 9624685 - 9624647
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  9624685 taattacattgaattatgtgattttctcaaattattagc 9624647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 12704056 - 12704014
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||| ||||||||||||| |||||| |||||||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattag 12704014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 20503572 - 20503474
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatt 277  Q
    |||||||||| |||||  |||||||| ||||  |||| ||| ||||||  |||| || || ||||||||||||||| ||||| ||||| ||||||||||    
T  20503572 gacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 278
Target Start/End: Complemental strand, 25775613 - 25775516
Alignment:
Q  181 acactcctccgattaaacgtgtccctgtgttggacacgtgcgtgtctgacactgaaacatgtaattacactgaaatatgtgatt-ttctcaaattatta 278  Q
    ||||||||| |||||  |||||||  |||| |||||||  |||||| ||||| || || ||||||||||||||| ||||||||| || |||||||||||    
T  25775613 acactcctcggattaggcgtgtcctggtgtcggacacga-cgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 25948902 - 25948940
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  25948902 taattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 26290429 - 26290379
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||| |||| |||||| || ||| |||||||||||||||||||||||    
T  26290429 gacactgacacatataattaaaccgaactatgtgattttctcaaattatta 26290379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 27277853 - 27277891
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||| || |||||||||||||||||||||||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagc 27277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 34189469 - 34189435
Alignment:
Q  244 attacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||||||| |||||||||||||||||    
T  34189469 attacactgaaatatgtcattttctcaaattatta 34189435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 51206348 - 51206406
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| ||||| || || |||| |||||||||| ||||||||||| |||||||||||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagc 51206406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 11493376 - 11493413
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  11493376 taattacactgaattatgtgattttctcacattattag 11493413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 14979224 - 14979187
Alignment:
Q  243 aattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagc 14979187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 16192760 - 16192801
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| ||||||||||||| ||||| |||||||||||||||||    
T  16192760 acatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 32804550 - 32804591
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  32804550 acatataattacactaaattatgtgattttctcaaattatta 32804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 35223045 - 35222956
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttct 268  Q
    |||||||||| ||| || |||||||| ||||  |||||||| | |||| ||||| || |||| |||||||| |||| |||||||||||||    
T  35223045 gacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 1438853 - 1438809
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcg 281  Q
    |||| |||||| |||||| ||||||||||||||||||| ||||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcg 1438809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 1509585 - 1509545
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||||| || ||||||||||| |||||||||||||    
T  1509585 tgtaattacactaaattatgtgattttttcaaattattagc 1509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 5407262 - 5407302
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||| |||| ||||||||||||||||||| |||||||    
T  5407262 taattacaatgaattatgtgattttctcaaatttttagcgg 5407302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 14832157 - 14832105
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| || |||||||||| |||  ||||||||||| |||||||||||||    
T  14832157 gacactgacacttgtaattacattgagttatgtgattttttcaaattattagc 14832105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 14840306 - 14840342
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  14840306 taattacactgaattatgtgattttctgaaattatta 14840342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 15812836 - 15812876
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||  |||||||||||||||||||||| ||||    
T  15812836 taattacactgagttatgtgattttctcaaattatttgcgg 15812876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 21211332 - 21211296
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  21211332 taattacactgaactatgtaattttctcaaattatta 21211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 21256999 - 21257039
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| |||||| ||||||||||| |||||||||||||    
T  21256999 tgtaattatactgaattatgtgattttttcaaattattagc 21257039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 25093566 - 25093510
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||| ||||| || |||| ||||||||||||| | |||||||||||||||| ||||    
T  25093566 gtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 35994751 - 35994790
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  35994751 tgtaattacactgaattatgtgatttt-tcaaattattagc 35994790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 49651799 - 49651839
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||| |||| ||||||||||| |||||||||||||    
T  49651799 tgtaattacagtgaattatgtgattttttcaaattattagc 49651839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 13360367 - 13360420
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaatta 275  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  13360367 gtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 19040417 - 19040356
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| ||||| || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  19040417 cgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcgg 19040356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 7265588 - 7265648
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| ||||| || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  7265588 gtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcgg 7265648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 28152204 - 28152105
Alignment:
Q  181 acactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||| |||||  | |||||| |||| ||||||||| |||||| ||||| || || ||||||||||||||| ||||||||||| ||||||||||||    
T  28152204 acactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattag 28152106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 279
Target Start/End: Complemental strand, 34595241 - 34595141
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||   ||||||| ||||  |||||||| |||||| ||||| || || ||||||||||||||| ||||||||||| |||||||||||    
T  34595241 gacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 34595142  T
Q  279 g 279  Q
    |    
T  34595141 g 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 278
Target Start/End: Original strand, 5732503 - 5732561
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||| ||||| || |||| |||||||||| ||||||||||||||||||||||||||    
T  5732503 gcgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattatta 5732561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 9025495 - 9025547
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| || |||| ||||||||||||| |||||||||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 16833418 - 16833315
Alignment:
Q  177 acagacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaatta 275  Q
    ||||||||||||| ||||    ||||||  |||| |||| |||| ||||||| |||| || || ||||||||||||||| ||||||||||| ||||||||    
T  16833418 acagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaatta 16833319  T
Q  276 ttag 279  Q
    ||||    
T  16833318 ttag 16833315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 28715384 - 28715301
Alignment:
Q  198 cgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| |||| | ||||||| |||||| ||||| || || ||||||||||||||| ||||| ||||| |||||||||||||    
T  28715384 cgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagc 28715301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 31384978 - 31384927
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||| || ||||||||||||||| ||||||||||| ||||||||||||    
T  31384978 gacactgacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 9658953 - 9658883
Alignment:
Q  213 gacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||| ||||||| |||| || | || ||||||||||||| ||||||||||||| |||||||||||||    
T  9658953 gacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcgg 9658883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 24645592 - 24645486
Alignment:
Q  176 cacagacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtga-ttttctcaaat 273  Q
    ||||||||||| || ||||| |||||||   |||| ||||||||| |||||||||||| || || ||||| || |||||| ||||||| |||| ||||||    
T  24645592 cacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttttttcaaat 24645493  T
Q  274 tattagc 280  Q
    |||||||    
T  24645492 tattagc 24645486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 7378044 - 7377983
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| ||||| || |||| |||||||| |||| ||||||||||||||||||| |||||||    
T  7378044 cgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcgg 7377983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 17841541 - 17841642
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||| | |||| |||||| || |||||| ||||| |  || |||||||||||| || ||||||||||| |||||||||||    
T  17841541 gacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattatta 17841640  T
Q  279 gc 280  Q
    ||    
T  17841641 gc 17841642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 30866154 - 30866199
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| |||||||| |||| |||||||||||||||||||||||||||    
T  30866154 acatataattacattgaattatgtgattttctcaaattattagcgg 30866199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 12696382 - 12696330
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| || ||||||||||||||| ||||| ||||| |||||||||||||    
T  12696382 gacactgacacttgtaattacactgaattatgtaattttttcaaattattagc 12696330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 16766743 - 16766703
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  16766743 tgtaattacactgaattatgtgattttttcaaattattagc 16766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 31579240 - 31579276
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31579240 taattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 32511681 - 32511721
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  32511681 taattacactgaattatgtgattttcttaaattattagcgg 32511721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 7086844 - 7086801
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| |||||||||| || |||||||||||||||||||||||||    
T  7086844 acatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 10770687 - 10770726
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  10770687 tgtaattacactgaattatgtgattttttcaaattattag 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 26562738 - 26562695
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||    
T  26562738 acatataattacactgaattatgtgattttctcaaatttttagc 26562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 281
Target Start/End: Original strand, 34073362 - 34073401
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcg 281  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  34073362 taattacactgaattatgagattttctcaaattattagcg 34073401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 5970121 - 5970159
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  5970121 tgtaattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 7977825 - 7977883
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| ||||| || || ||||||||||||||| ||||| ||||| |||||||||||||    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagc 7977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 7996393 - 7996431
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  7996393 taattacactgaattatatgattttctcaaattattagc 7996431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 8022408 - 8022370
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  8022408 taattacactgaattatatgattttctcaaattattagc 8022370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 8805587 - 8805625
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||| || |||||||||||||||||||||||||    
T  8805587 taattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 9027236 - 9027182
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| ||||||||| ||| ||||||||| |||||||||||||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgattatctcaaattattagcgg 9027182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 9617492 - 9617442
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||| || |||| |||||||| |||| |||||||||||||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 9629441 - 9629387
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| |||||||| |||| |||||||||||||||||||||| ||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttctcaaattattggcgg 9629387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 10294165 - 10294111
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| |||||||| ||||||||| |||| |||||||||||||||||    
T  10294165 gacaccgacacatataattacattgaaatatgcgattatctcaaattattagcgg 10294111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 13851802 - 13851740
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| ||||  || |||| ||||||||||||| || || |||||||||||||||||||||    
T  13851802 gcgtgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcgg 13851740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 21924930 - 21924988
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| ||||| || |||| ||||||||||||| ||| |||| ||||||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagc 21924988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 32978851 - 32978953
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtg-attttctcaaattatt 277  Q
    |||||||||  ||||| ||||||||| |||| ||||| ||| |||||| ||||| || || |||||||||||| || ||||||  |||| ||||||||||    
T  32978851 gacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattatt 32978950  T
Q  278 agc 280  Q
    |||    
T  32978951 agc 32978953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 1532289 - 1532244
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||    
T  1532289 acatataattacactgaattatgtaattttatcaaattattagcgg 1532244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 11591880 - 11591917
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaatt 274  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  11591880 acatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 20370476 - 20370533
Alignment:
Q  223 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||| || | ||  |||| |||||||||| |||||||||||||||||||    
T  20370476 tgtctgacactgacacttatacctacattgaaatatgtaattttctcaaattattagc 20370533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 5462730 - 5462694
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||| |||| |||||||||||||||||||||||    
T  5462730 taattacaatgaattatgtgattttctcaaattatta 5462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 6665257 - 6665217
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| ||||| |||||||||| ||||||||||||||||    
T  6665257 taattactctgaattatgtgatttactcaaattattagcgg 6665217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 7569183 - 7569219
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  7569183 taattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 9107383 - 9107423
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| | ||||||||| |||||||||||||    
T  9107383 tgtaattacactgaattttgtgattttttcaaattattagc 9107423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 17341679 - 17341715
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  17341679 taattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 19044523 - 19044471
Alignment:
Q  227 tgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| || |||| |||| |||||||| |||||||| |||||||||||||||    
T  19044523 tgacaccgacacatataataacactgaattatgtgatattctcaaattattag 19044471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 25096470 - 25096430
Alignment:
Q  239 atgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||||||||  | ||||||||||||||||||||||||    
T  25096470 atgtaattacactagattatgtgattttctcaaattattag 25096430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 31959205 - 31959165
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||| | ||||||||||| |||||||||||||    
T  31959205 tgtaattacactgcattatgtgattttttcaaattattagc 31959165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 33001274 - 33001342
Alignment:
Q  213 gacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| |||||| ||||| || |||| |||||||| | || ||||||||||| |||||||||||||    
T  33001274 gacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagc 33001342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 21191008 - 21191109
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtgc-gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||||| | || |||||||||  ||||| ||||| || || ||||||||||||||| ||||||||||| |||||||||||    
T  21191008 gacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 21191107  T
Q  279 gc 280  Q
    ||    
T  21191108 gc 21191109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 21576697 - 21576798
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||||| ||||  |||||||| |||||| ||||  || || ||||||||||||||| ||||||||||| |||||||||||    
T  21576697 gacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattatta 21576796  T
Q  279 gc 280  Q
    ||    
T  21576797 gc 21576798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 30502360 - 30502443
Alignment:
Q  200 tgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| |||| ||||| ||| |||||| ||||| || |||| ||||||||||||| || ||||||||||||||||||||||||    
T  30502360 tgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcgg 30502443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 30542703 - 30542786
Alignment:
Q  200 tgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| |||| ||||| ||| |||||| ||||| || |||| ||||||||||||| || ||||||||||||||||||||||||    
T  30542703 tgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcgg 30542786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 42893467 - 42893366
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtgc-gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||  ||||  |||||||  |||| |||||||||  ||||||||||| || || ||||||||||||| | ||||||||||| |||||||||||    
T  42893467 gacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattatta 42893368  T
Q  279 gc 280  Q
    ||    
T  42893367 gc 42893366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 39698599 - 39698547
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||||||||    
T  39698599 gacactgacacttgtaattacactgaattatgtgattttttcaaattattagc 39698547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 6471899 - 6471942
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  6471899 acatataattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 12927734 - 12927659
Alignment:
Q  207 gtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcg 281  Q
    |||||| ||||||| | ||||||||||||| | || |||||||||| || ||| ||||||||||||||||||||||    
T  12927734 gtgttgaacacgtgtcatgtctgacactgacatatataattacactaaattatatgattttctcaaattattagcg 12927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 17593675 - 17593777
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtgcgtgtctgac-actgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||| |||||||| ||||||||||||||| || |  || ||  | | || ||||||||||||| || ||||||||||||||||||||    
T  17593675 gacactcctcggattaagcgtgtcccggtgttggacacgtgc-tgacacaccaccaacatatataattacactgaattacgtgattttctcaaattatta 17593773  T
Q  279 gcgg 282  Q
    ||||    
T  17593774 gcgg 17593777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 3966561 - 3966507
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| ||||||||||||| | |||||||||||||||||||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttctcaaattattagcgg 3966507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 6247687 - 6247629
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| ||||| || || ||||||||||||||| ||||||||||| ||||||||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 27932281 - 27932239
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  27932281 tgtaattacactgaattatgtaattttctcaaattattagcgg 27932239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 28588668 - 28588725
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||| ||||| || || | ||||||||||||| |||||||||||||||||||||||    
T  28588668 cgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 6326292 - 6326351
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcg 281  Q
    ||||| ||| |||| || ||||||||||||||| ||||| |||||||||||||| |||||    
T  6326292 gtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcg 6326351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 41091267 - 41091310
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||    
T  41091267 acatataattacactgaattatgtgattttctcaaatcattagc 41091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 19438386 - 19438348
Alignment:
Q  243 aattacactgaaatatgtgattttctcaaattattagcg 281  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  19438386 aattacactgaattatgtgattttctcaaattatcagcg 19438348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 275
Target Start/End: Original strand, 24273040 - 24273078
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaatta 275  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  24273040 acatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 275
Target Start/End: Complemental strand, 24389174 - 24389136
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaatta 275  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  24389174 acatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 36838601 - 36838547
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| |||||||||| || ||||| |||||||||||||||||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttctcaaattattagcgg 36838547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 16203791 - 16203848
Alignment:
Q  223 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||| ||||| || |||| |||||||||| || |||| ||||||||||||||||||||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagc 16203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 26312834 - 26312773
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||| ||||| || |||| ||||||||||||| ||  |||||||||||||||||| ||||    
T  26312834 cgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcgg 26312773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 27144512 - 27144467
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| |||||||||| || |||||||||| ||||||||||||||||    
T  27144512 acatataattacactaaattatgtgatttcctcaaattattagcgg 27144467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 35017081 - 35017044
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||||| || ||||||||||||||||||||||||    
T  35017081 taattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 5467993 - 5468029
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  5467993 taattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 14674315 - 14674275
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||||| || ||||||||||| |||||||||||||    
T  14674315 tgtaattacactaaattatgtgattttttcaaattattagc 14674275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 19579747 - 19579707
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||| |||| || |||||||||||||||||||||||||    
T  19579747 tgtaattgcactaaattatgtgattttctcaaattattagc 19579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 23016004 - 23016040
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  23016004 taattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 30098370 - 30098334
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||| |||| |||||||||||||||||||||||    
T  30098370 taattacattgaattatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 31084369 - 31084329
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||||| |||| ||||||||||| |||||||||||||    
T  31084369 tgtaattacattgaattatgtgattttttcaaattattagc 31084329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 43001846 - 43001806
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  43001846 tgtaattacactgaattatgtaattttttcaaattattagc 43001806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 2438671 - 2438772
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||  |||||||| |||| ||||| ||| |||||| ||||| || || ||||||||||||||| ||||||||||| | |||||||||    
T  2438671 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattatta 2438770  T
Q  279 gc 280  Q
    ||    
T  2438771 gc 2438772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 21091786 - 21091727
Alignment:
Q  223 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| || ||||||||||||||| ||||| ||||||| |||||||||||||    
T  21091786 tgtctgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcgg 21091727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 21616811 - 21616766
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  21616811 acatataattacactgaattatgtgattttctcaaattattagcgg 21616766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 28678022 - 28677913
Alignment:
Q  179 agacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactga-----aacatgtaattacactgaaatatgtgattttctcaaa 272  Q
    ||||||||||||| | |  ||||||||||||| |||||| || ||||| |||||| ||     ||||| ||||||||||||| ||||||||||| |||||    
T  28678022 agacactcctccggtcagccgtgtccctgtgtcggacacttgtcgtgtttgacaccgacaccgaacatataattacactgaattatgtgattttttcaaa 28677923  T
Q  273 ttattagcgg 282  Q
    ||||||||||    
T  28677922 ttattagcgg 28677913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 18840965 - 18841065
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||   ||||||| |||| ||||| ||| |||||||||||| || || |||||||||||| || ||||| ||||| |||||||||||    
T  18840965 gacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattatta 18841064  T
Q  279 g 279  Q
    |    
T  18841065 g 18841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 42832291 - 42832331
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  42832291 taattacactgaaatatgtaattttctcaaattattagcgg 42832331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 37411192 - 37411299
Alignment:
Q  176 cacagacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaatt 274  Q
    ||||| |||||||| || ||  |||||||| |||| ||||||| | |||||  ||||  || |||| |||| |||||||| |||||||||||||||||||    
T  37411192 cacaggcactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaatt 37411291  T
Q  275 attagcgg 282  Q
    ||||||||    
T  37411292 attagcgg 37411299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 5367257 - 5367199
Alignment:
Q  221 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||| ||||| || |||| ||||||||||||| |||||||||| |||||||||||||    
T  5367257 cgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 21782833 - 21782871
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagc 21782871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 34691798 - 34691860
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| ||||| || |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  34691798 gcgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcgg 34691860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 34714210 - 34714272
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| ||||| || |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  34714210 gcgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcgg 34714272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 44860378 - 44860324
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || |||| ||||||||||||| |||| ||||||||||||||||||||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattttctcaaattattagcgg 44860324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 18276582 - 18276525
Alignment:
Q  225 tctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||||||| || |||  ||||||||||||| || ||||||||||||||||||||||||    
T  18276582 tctgacaccgacacacataattacactgaattaagtgattttctcaaattattagcgg 18276525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 23718075 - 23718030
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||    
T  23718075 acatataattacactgaattatgtgactttctcaaattattagcgg 23718030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 24105747 - 24105702
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||    
T  24105747 acatataattacactgaattatgtgactttctcaaattattagcgg 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 31808134 - 31808081
Alignment:
Q  229 acactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| |||| ||||||||||||| ||||||||||| | |||||||||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcgg 31808081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 37559084 - 37558983
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||| ||||| || |||| ||||||||| |  ||| ||||| || || |||||||||| |||| |||||||||||  ||||||||||    
T  37559084 gacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattatta 37558985  T
Q  279 gc 280  Q
    ||    
T  37558984 gc 37558983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 38117111 - 38117212
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtgc-gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||| |||| |||||  |||||||| |||| |||||||||  ||||| |||||  | || ||||||||||| ||| ||||||||||| |||||||||||    
T  38117111 gacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattatta 38117210  T
Q  279 gc 280  Q
    ||    
T  38117211 gc 38117212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 30717543 - 30717583
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  30717543 tgtaattacactgaattatgtgattttttcaaattattagc 30717583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 18889608 - 18889646
Alignment:
Q  244 attacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  18889608 attacactgaattatgtgattttctcaatttattagcgg 18889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 29970566 - 29970604
Alignment:
Q  244 attacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  29970566 attacactgaactatgcgattttctcaaattattagcgg 29970604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 30404863 - 30404901
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  30404863 tgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 35449567 - 35449521
Alignment:
Q  232 ctgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| |||| ||||||||||||| | |||||||||||||||||||||    
T  35449567 ctgacacatataattacactgaattctgtgattttctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 39323310 - 39323268
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||    
T  39323310 tgtaattacactgaattatgtaattttgtcaaattattagcgg 39323268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 44605136 - 44605190
Alignment:
Q  224 gtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| |||| || ||||||||||||| |||| ||||| |||||||||||||||||    
T  44605136 gtctaacaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 25846785 - 25846748
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||||||||  |||||||||||||||||||||||    
T  25846785 taattacactgaatcatgtgattttctcaaattattag 25846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 896253 - 896217
Alignment:
Q  244 attacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||| |||||||||||||||||||||| |||||||    
T  896253 attacattgaaatatgtgattttctcaaactattagc 896217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 2331834 - 2331802
Alignment:
Q  246 tacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||| |||||||||||||||||||||||    
T  2331834 tacactgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 7203938 - 7203966
Alignment:
Q  15 cgtgactgatgtccaacatgtgtcaatgc 43  Q
    |||||||||||||||||||||||||||||    
T  7203938 cgtgactgatgtccaacatgtgtcaatgc 7203966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 15972961 - 15972881
Alignment:
Q  199 gtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||| | || ||||||||| |||||| ||||| || || ||||||||||||||| | ||| ||||| |||||||||||    
T  15972961 gtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 19536390 - 19536450
Alignment:
Q  220 gcgtgtctgacactgaaacatgtaattacactgaaatatgtga-ttttctcaaattattag 279  Q
    ||||||| ||||| || || ||||||||||||||| ||||||| |||| ||||||||||||    
T  19536390 gcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattag 19536450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 21374712 - 21374752
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  21374712 tgtaattacactgaattatgtaattttttcaaattattagc 21374752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 23921297 - 23921261
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  23921297 taattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 28412394 - 28412358
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattatta 28412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 36281737 - 36281693
Alignment:
Q  234 gaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||| | |||||||| || |||||||||||||||||||||||    
T  36281737 gaaacatatgattacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 414 - 515
Alignment:
Q  180 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||||| |||||   ||||||| |||| ||||||| | |||||| ||||| || || ||||||||||||||| | ||||||||| |||||||||||    
T  414 gacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattatta 513  T
Q  279 gc 280  Q
    ||    
T  514 gc 515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 20230 - 20178
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||||||||||    
T  20230 gacactgacacttgtaattacactgaattatgtgattttttcaaattattagc 20178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 63837 - 63777
Alignment:
Q  222 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||| || || ||||||| ||||||| ||||| |||||||||||||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcgg 63777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 92862 - 92811
Alignment:
Q  231 actgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||| || ||||||||||||||| ||||| |||||||||||||||||||||    
T  92862 actgacacttgtaattacactgaattatgtaattttctcaaattattagcgg 92811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 14633 - 14537
Alignment:
Q  181 acactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    |||||||| ||||||  |||||| | |||| ||||||||| |||||| |||||    || ||||||||||||||| ||||||||||| ||||||||||||    
T  14633 acactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc---acttgtaattacactgaattatgtgattttttcaaattattag 14537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 44535 - 44580
Alignment:
Q  237 acatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||    
T  44535 acatataattacactgaattatgtgattttctcaaatttttagcgg 44580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 51857 - 51817
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  51857 tgtaattacactgaattatgtgattttttcaaattattagc 51817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 53224 - 53184
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  53224 taattacactgaattatgtgattttctcaaattattggcgg 53184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 135313 - 135365
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||| || |||| ||||||||| ||| |||||||||||||||||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaattattagc 135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 263373 - 263425
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    |||||||| || | ||||||||||||| |||||| ||||||||||||||||||    
T  263373 gacactgacacttataattacactgaattatgtggttttctcaaattattagc 263425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 13446 - 13407
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  13446 tgtaattgcactgaattatgtgattttctcaaattattag 13407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 21881 - 21920
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  21881 tgtaattgcactgaattatgtgattttctcaaattattag 21920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 9748 - 9799
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattag 279  Q
    ||||| || |||| ||||||||||||| || |||||||||||||||||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 3850 - 3900
Alignment:
Q  228 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||||||| || ||||||||||||||| ||||||||||| | |||||||||    
T  3850 gacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 8902 - 8804
Alignment:
Q  183 actcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||| |||||  |||||| | |||| ||||||||| |||||| ||||| || || |||||||||||| ||  || ||||||| |||||||||||||    
T  8902 actcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagc 8804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 46728 - 46690
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  46728 tgtaattacactgaattatgtgattttttcaaattatta 46690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 1092 - 1039
Alignment:
Q  229 acactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcgg 282  Q
    ||||||| |||| || |||||||||| ||||| ||||| |||||||||||||||    
T  1092 acactgacacatatagttacactgaattatgtaattttttcaaattattagcgg 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 178818 - 178871
Alignment:
Q  227 tgacactgaaacatgtaattacactgaaatatg-tgattttctcaaattattag 279  Q
    ||||||||| || ||||||||||||||| |||| ||||||| ||||||||||||    
T  178818 tgacactgacacttgtaattacactgaattatgatgattttttcaaattattag 178871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 33376 - 33416
Alignment:
Q  240 tgtaattacactgaaatatgtgattttctcaaattattagc 280  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  33376 tgtaattacactgaattatgttattttttcaaattattagc 33416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 70358 - 70286
Alignment:
Q  207 gtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattatta 278  Q
    |||| ||||||||| |||||| ||||| || || | ||||||||||||| ||||| ||||| |||||||||||    
T  70358 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 90887 - 90851
Alignment:
Q  242 taattacactgaaatatgtgattttctcaaattatta 278  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  90887 taattacactgaattatatgattttctcaaattatta 90851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University