View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16473_low_1 (Length: 808)

Name: NF16473_low_1
Description: NF16473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16473_low_1
NF16473_low_1
[»] chr7 (30 HSPs)
chr7 (8-734)||(21160813-21161575)
chr7 (394-540)||(9135335-9135479)
chr7 (326-544)||(29373351-29373567)
chr7 (401-544)||(26762881-26763022)
chr7 (390-544)||(5863156-5863308)
chr7 (401-504)||(7486525-7486628)
chr7 (393-506)||(9867945-9868058)
chr7 (390-499)||(13292136-13292245)
chr7 (391-499)||(16987105-16987213)
chr7 (390-534)||(12644754-12644897)
chr7 (390-504)||(39879356-39879470)
chr7 (402-461)||(5925526-5925585)
chr7 (390-451)||(2226612-2226673)
chr7 (402-499)||(10287609-10287706)
chr7 (425-544)||(43172006-43172114)
chr7 (395-446)||(26562891-26562942)
chr7 (393-541)||(9573400-9573545)
chr7 (398-499)||(34854220-34854321)
chr7 (467-615)||(16203768-16203918)
chr7 (411-456)||(27803358-27803403)
chr7 (401-461)||(18773961-18774021)
chr7 (403-461)||(1979044-1979102)
chr7 (437-543)||(12004751-12004854)
chr7 (394-448)||(12163751-12163805)
chr7 (423-499)||(5929024-5929100)
chr7 (571-615)||(16204443-16204487)
chr7 (411-454)||(4229848-4229891)
chr7 (392-486)||(13159344-13159439)
chr7 (390-452)||(33799934-33799997)
chr7 (473-541)||(16204343-16204409)
[»] chr2 (32 HSPs)
chr2 (390-615)||(45258047-45258274)
chr2 (328-535)||(12127642-12127847)
chr2 (394-544)||(12168945-12169094)
chr2 (390-540)||(36267467-36267615)
chr2 (392-544)||(3586334-3586484)
chr2 (390-534)||(45714964-45715106)
chr2 (396-506)||(20120322-20120432)
chr2 (328-544)||(19919036-19919250)
chr2 (409-535)||(24499777-24499901)
chr2 (391-540)||(27846493-27846640)
chr2 (393-497)||(15825126-15825230)
chr2 (390-544)||(29710987-29711137)
chr2 (394-500)||(10923177-10923283)
chr2 (405-499)||(18770296-18770392)
chr2 (390-499)||(19050448-19050557)
chr2 (390-499)||(29137870-29137979)
chr2 (408-540)||(18772239-18772365)
chr2 (392-499)||(18135842-18135949)
chr2 (390-455)||(17671942-17672007)
chr2 (394-502)||(24755441-24755549)
chr2 (390-544)||(15390555-15390707)
chr2 (392-486)||(30638534-30638628)
chr2 (390-455)||(17626870-17626935)
chr2 (415-456)||(26713591-26713632)
chr2 (405-461)||(24157357-24157413)
chr2 (401-461)||(24318893-24318953)
chr2 (401-456)||(28426178-28426233)
chr2 (402-455)||(17560744-17560797)
chr2 (403-455)||(12634828-12634880)
chr2 (639-706)||(18134526-18134593)
chr2 (407-456)||(36022447-36022496)
chr2 (396-449)||(40800099-40800152)
[»] chr4 (23 HSPs)
chr4 (333-550)||(19809614-19809828)
chr4 (390-544)||(12683754-12683906)
chr4 (393-544)||(47253249-47253398)
chr4 (327-507)||(10981772-10981951)
chr4 (395-499)||(15514574-15514678)
chr4 (392-543)||(19643673-19643822)
chr4 (390-499)||(15742166-15742275)
chr4 (401-544)||(29157082-29157223)
chr4 (322-506)||(19818595-19818778)
chr4 (340-452)||(3981869-3981981)
chr4 (394-544)||(5518513-5518661)
chr4 (407-498)||(14602029-14602120)
chr4 (401-506)||(2674580-2674681)
chr4 (392-503)||(14003073-14003184)
chr4 (407-461)||(13171065-13171119)
chr4 (401-461)||(17110678-17110738)
chr4 (395-461)||(16012522-16012588)
chr4 (404-461)||(1638369-1638425)
chr4 (422-461)||(12415437-12415476)
chr4 (404-455)||(19563945-19563996)
chr4 (391-453)||(19473610-19473672)
chr4 (659-741)||(47253522-47253604)
chr4 (510-543)||(50151775-50151808)
[»] chr8 (29 HSPs)
chr8 (481-632)||(23497042-23497194)
chr8 (391-543)||(30477611-30477761)
chr8 (393-542)||(18322915-18323062)
chr8 (391-506)||(24507427-24507542)
chr8 (393-542)||(13754730-13754877)
chr8 (336-486)||(23269161-23269311)
chr8 (391-544)||(3459454-3459604)
chr8 (410-544)||(17698255-17698387)
chr8 (393-550)||(13764961-13765116)
chr8 (393-544)||(26916868-26917017)
chr8 (392-534)||(21416709-21416849)
chr8 (390-535)||(15058004-15058147)
chr8 (428-506)||(6928096-6928174)
chr8 (390-535)||(17927683-17927826)
chr8 (420-544)||(5859814-5859936)
chr8 (404-497)||(24576598-24576691)
chr8 (435-505)||(24070866-24070936)
chr8 (401-461)||(14666890-14666950)
chr8 (390-445)||(20055548-20055603)
chr8 (390-461)||(24677638-24677709)
chr8 (401-459)||(4565446-4565504)
chr8 (389-449)||(11776298-11776358)
chr8 (390-446)||(23497201-23497257)
chr8 (393-459)||(1909761-1909827)
chr8 (408-455)||(8490046-8490093)
chr8 (476-506)||(7220617-7220647)
chr8 (390-436)||(17319698-17319744)
chr8 (558-615)||(6927989-6928045)
chr8 (394-455)||(22454290-22454351)
[»] chr5 (26 HSPs)
chr5 (393-600)||(27083148-27083356)
chr5 (328-535)||(22903000-22903205)
chr5 (412-544)||(26994576-26994706)
chr5 (340-540)||(8938829-8939028)
chr5 (339-550)||(20025201-20025410)
chr5 (393-544)||(25537377-25537526)
chr5 (396-524)||(25333710-25333836)
chr5 (401-461)||(26348130-26348190)
chr5 (392-461)||(24546318-24546386)
chr5 (405-534)||(32418466-32418593)
chr5 (395-543)||(22865735-22865881)
chr5 (390-450)||(16621177-16621237)
chr5 (390-456)||(4477167-4477233)
chr5 (390-535)||(34493489-34493625)
chr5 (390-451)||(227739-227800)
chr5 (394-499)||(25829001-25829106)
chr5 (401-461)||(18799760-18799820)
chr5 (405-477)||(19846053-19846125)
chr5 (405-477)||(26163619-26163691)
chr5 (392-495)||(19993182-19993285)
chr5 (390-461)||(31202479-31202550)
chr5 (390-456)||(7449761-7449827)
chr5 (403-461)||(18803900-18803958)
chr5 (435-544)||(24647302-24647409)
chr5 (558-710)||(19990871-19991023)
chr5 (411-454)||(18884508-18884551)
[»] chr1 (30 HSPs)
chr1 (390-544)||(26977709-26977861)
chr1 (390-600)||(16030364-16030575)
chr1 (390-541)||(16050363-16050512)
chr1 (390-599)||(5671739-5671950)
chr1 (328-507)||(5459714-5459892)
chr1 (393-541)||(34273059-34273205)
chr1 (399-506)||(12177364-12177471)
chr1 (390-505)||(22414744-22414859)
chr1 (390-500)||(33101519-33101629)
chr1 (390-535)||(2140927-2141066)
chr1 (352-535)||(18246074-18246254)
chr1 (390-524)||(52565549-52565681)
chr1 (394-459)||(4601540-4601605)
chr1 (402-499)||(1659802-1659899)
chr1 (390-491)||(14255051-14255152)
chr1 (390-499)||(23728833-23728941)
chr1 (391-499)||(25408066-25408174)
chr1 (405-501)||(23280273-23280367)
chr1 (390-507)||(43344449-43344564)
chr1 (401-461)||(21098896-21098956)
chr1 (390-461)||(48637519-48637591)
chr1 (390-456)||(8018918-8018984)
chr1 (390-495)||(16299591-16299695)
chr1 (390-461)||(21682641-21682712)
chr1 (405-471)||(16522759-16522825)
chr1 (393-461)||(2612714-2612782)
chr1 (405-461)||(3590811-3590867)
chr1 (402-456)||(46016096-46016149)
chr1 (405-453)||(30732501-30732549)
chr1 (466-544)||(12032223-12032298)
[»] chr6 (39 HSPs)
chr6 (391-544)||(19305434-19305585)
chr6 (328-544)||(30680899-30681113)
chr6 (390-541)||(18147275-18147424)
chr6 (393-542)||(20148289-20148434)
chr6 (393-542)||(22184394-22184539)
chr6 (412-544)||(34572964-34573094)
chr6 (390-631)||(3404741-3404984)
chr6 (390-499)||(12449596-12449705)
chr6 (394-494)||(34187272-34187372)
chr6 (393-543)||(31295506-31295654)
chr6 (393-497)||(19331695-19331799)
chr6 (401-544)||(33596841-33596982)
chr6 (411-502)||(689867-689958)
chr6 (394-505)||(22572018-22572128)
chr6 (393-550)||(9291984-9292138)
chr6 (391-544)||(34064165-34064316)
chr6 (393-535)||(9277280-9277419)
chr6 (390-461)||(16343548-16343619)
chr6 (390-461)||(22497349-22497420)
chr6 (392-506)||(11087473-11087587)
chr6 (413-541)||(15480314-15480440)
chr6 (430-542)||(14268440-14268551)
chr6 (403-505)||(14080466-14080567)
chr6 (404-505)||(25008398-25008498)
chr6 (423-529)||(4251029-4251133)
chr6 (467-584)||(12203568-12203683)
chr6 (403-544)||(27860918-27861057)
chr6 (390-456)||(15104323-15104385)
chr6 (393-535)||(2907878-2908017)
chr6 (392-499)||(19730604-19730710)
chr6 (404-498)||(12424328-12424422)
chr6 (422-499)||(9403173-9403250)
chr6 (390-499)||(12488009-12488118)
chr6 (390-458)||(23768162-23768230)
chr6 (427-540)||(10115659-10115770)
chr6 (424-543)||(17380100-17380217)
chr6 (402-461)||(13823428-13823487)
chr6 (446-544)||(16130993-16131089)
chr6 (401-451)||(14184604-14184654)
[»] chr3 (27 HSPs)
chr3 (394-542)||(9801056-9801201)
chr3 (393-535)||(2311813-2311953)
chr3 (424-544)||(16704405-16704523)
chr3 (394-541)||(21342260-21342405)
chr3 (392-506)||(17143755-17143869)
chr3 (392-530)||(17485608-17485744)
chr3 (390-535)||(8122894-8123036)
chr3 (424-553)||(30606931-30607058)
chr3 (392-541)||(1770796-1770944)
chr3 (391-502)||(28723784-28723895)
chr3 (390-461)||(21649382-21649453)
chr3 (392-501)||(431327-431436)
chr3 (394-499)||(12516158-12516263)
chr3 (391-535)||(28715467-28715604)
chr3 (394-455)||(1475722-1475783)
chr3 (392-535)||(20622377-20622520)
chr3 (396-503)||(13085082-13085189)
chr3 (398-456)||(35314178-35314236)
chr3 (409-456)||(9007832-9007879)
chr3 (390-544)||(14860069-14860221)
chr3 (393-499)||(12731574-12731680)
chr3 (395-506)||(13932921-13933029)
chr3 (390-498)||(21652612-21652719)
chr3 (564-615)||(28723668-28723719)
chr3 (421-451)||(10896103-10896133)
chr3 (394-451)||(7743409-7743466)
chr3 (390-499)||(12251957-12252066)
[»] scaffold0023 (1 HSPs)
scaffold0023 (398-615)||(95705-95924)
[»] scaffold0505 (1 HSPs)
scaffold0505 (328-505)||(7792-7969)
[»] scaffold0174 (1 HSPs)
scaffold0174 (390-504)||(29286-29398)
[»] scaffold0360 (1 HSPs)
scaffold0360 (400-541)||(13901-14040)
[»] scaffold0140 (1 HSPs)
scaffold0140 (404-544)||(6281-6419)
[»] scaffold0291 (2 HSPs)
scaffold0291 (427-541)||(15403-15515)
scaffold0291 (392-506)||(8583-8696)
[»] scaffold0054 (1 HSPs)
scaffold0054 (421-542)||(68774-68891)
[»] scaffold0205 (2 HSPs)
scaffold0205 (401-499)||(10928-11026)
scaffold0205 (390-535)||(22855-22998)
[»] scaffold0002 (2 HSPs)
scaffold0002 (390-499)||(379685-379794)
scaffold0002 (401-544)||(120981-121122)
[»] scaffold0013 (1 HSPs)
scaffold0013 (403-459)||(4477-4533)
[»] scaffold0101 (1 HSPs)
scaffold0101 (390-461)||(10769-10840)
[»] scaffold0005 (1 HSPs)
scaffold0005 (407-498)||(215258-215349)
[»] scaffold0057 (1 HSPs)
scaffold0057 (392-506)||(73808-73922)
[»] scaffold0074 (1 HSPs)
scaffold0074 (392-504)||(35224-35337)
[»] scaffold0103 (1 HSPs)
scaffold0103 (387-499)||(40762-40874)
[»] scaffold0022 (1 HSPs)
scaffold0022 (403-455)||(69281-69333)
[»] scaffold0294 (1 HSPs)
scaffold0294 (429-544)||(212-326)
[»] scaffold0263 (1 HSPs)
scaffold0263 (391-499)||(20510-20618)
[»] scaffold0328 (1 HSPs)
scaffold0328 (399-499)||(10246-10346)
[»] scaffold0092 (1 HSPs)
scaffold0092 (390-540)||(21592-21740)
[»] scaffold0034 (1 HSPs)
scaffold0034 (390-541)||(18444-18592)
[»] scaffold0518 (1 HSPs)
scaffold0518 (404-461)||(8954-9010)
[»] scaffold0380 (1 HSPs)
scaffold0380 (390-499)||(6873-6982)
[»] scaffold0096 (1 HSPs)
scaffold0096 (401-461)||(42229-42289)


Alignment Details
Target: chr7 (Bit Score: 537; Significance: 0; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 537; E-Value: 0
Query Start/End: Original strand, 8 - 734
Target Start/End: Original strand, 21160813 - 21161575
Alignment:
Q  8 gagatgaataatagaacattgattgaaagagttaaatagtcaaatgtttgttgcgtaggcagacctttgagagccgttttggggtgcgacattgagcaca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  21160813 gagatgaataatagaacattgattgaaagagttaaatagtcaaatgtttgttgtgtaggcagacctttgagagccgttttggggtgagacattgagcaca 21160912  T
Q  108 attgtgcatgttatctttcaccatgtgtatccttgcaatatgaagtttggtaagaatttttcgaatgatcacttatgtattttttcagatttgaagaatt 207  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21160913 attgtgcatgttatctttcaccatgtgtatccttgcaatatcaagtttggtaagaatttttcgaatgatcacttatgtgttttttcagatttgaagaatt 21161012  T
Q  208 tgtaaagagtcagcggtgttttatgagttatcgcctaaatggagctcgatataggtttgataatcttgacacgaataaacttattaga------------ 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||                
T  21161013 tgtaaagagtcagcggtgttttatgagttatcgcctaaatggagctcgatataggtttgataatcttgacacaaataagcttattagatgttttgatgat 21161112  T
Q  296 ----tcttagaagatctataattaaaagacatgcattgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaaga 391  Q
        |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  21161113 gagttcttagaagacctataattaaaagacatgcattgatctgtccagtgaggatggatgagaggcaatgttggcagaatatgctctggaacggggaaga 21161212  T
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21161213 tgagtcttcgcggtggaacgaaa-gtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagctaagaaagtgtgtgtagaaagtgttgtg 21161311  T
Q  492 aaaagtgaatcatac------------actttgagggtgaagcaaagtcacccttacataggcgctcgtgaagataa----ttccaagttttgcagcg-- 573  Q
    |||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||      
T  21161312 aaaagtgaatcatacactttgagggtgactttgagggtgaagcaaagtcacccttacataggcgctcgtgaagataactgtttccaagttttgcagcgtg 21161411  T
Q  574 ---tgtgattaggaagcggttagaggacacatgaagggtgatcctaacgtgaaggcgtgcttgaatacggtgcaataaagctggcgtattccttcagaca 670  Q
       |||||||||| ||||||| |||||||| |||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  21161412 tgatgtgattagggagcggttggaggacacgtgaagggtgatcctaacgcggaggcgtgcttgaatgcggtgcaataaagctggcgtattccatcagaca 21161511  T
Q  671 cgggaccttaaggcggtgcaaatatgggccacgtgtcaacatggaattcgtctattgatcgatc 734  Q
    ||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||    
T  21161512 cggaaccttaaggcggtgcaagtatgagccacgtgtcaacatgggattcgtctattgatcgatc 21161575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 394 - 540
Target Start/End: Complemental strand, 9135479 - 9135335
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    ||||||| |||||||||||||||||  |  |||||||||||||||| ||||||||||||||||||||| || |||||| ||||||| ||| |||||||||    
T  9135479 agtcttcacggtggaacgaaaggtgcatataggcacgttagcactctaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaactgttgtgaa 9135380  T
Q  494 aagtgaatcatacactttgagggtgaagcaaagtcacccttacatag 540  Q
    |||||||||||  || |||||||||||||||| ||||||||| ||||    
T  9135379 aagtgaatcat--accttgagggtgaagcaaattcacccttatatag 9135335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 326 - 544
Target Start/End: Original strand, 29373351 - 29373567
Alignment:
Q  326 attgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcag 425  Q
    ||||||||||||||||||||| |||| ||||||||  ||| |||| ||| ||||| | || |  ||||||| || |||||| |||||||||||  |||||    
T  29373351 attgatctgtccagtgaggatagatgagaggcaatagtggtggaaaatgttctggtacggtggtgatgagtttttgcggtgaaacgaaaggtgcatgcag 29373450  T
Q  426 gcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaa 525  Q
    ||| ||||| ||||||| ||||||||||||  || | || |||||| ||||||||||| ||||||||||| ||||||||  || |||||||||||||||     
T  29373451 gcatgttaggactccaatgctcaagtcagttgtgtaattgagaaagagtgtgtagaaaatgttgtgaaaattgaatcat--accttgagggtgaagcaat 29373548  T
Q  526 gtcacccttacataggcgc 544  Q
    |||||||| | ||||||||    
T  29373549 gtcaccctcatataggcgc 29373567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 401 - 544
Target Start/End: Complemental strand, 26763022 - 26762881
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaa 500  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||||||||||| |||  | | |||  ||||||||||||||||||||||||||||    
T  26763022 gcggtggagcgaaaggttcttgcaggcacgttagcactccaacgctcaagtcagtaaaggaactcataaatagtgtgtagaaagtgttgtgaaaagtgaa 26762923  T
Q  501 tcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||  || ||||||||||||||| | ||||| || ||||||||    
T  26762922 tcat--accttgagggtgaagcaaggacacccatatataggcgc 26762881  T

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Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 390 - 544
Target Start/End: Original strand, 5863156 - 5863308
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||| |||| ||||||||  ||  |||| |||||||||||||| |||||||||||||||||| ||  | |||||| ||||||||||| |||||    
T  5863156 gatgagtcttcacggtagaacgaaatttgcgtgcaagcacgttagcactcaaacgctcaagtcagtaatcgaactgagaaagagtgtgtagaaaatgttg 5863255  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    | |||||||||||||  || ||||||||| ||||| |||||||||  ||||||||    
T  5863256 taaaaagtgaatcat--accttgagggtggagcaatgtcacccttgtataggcgc 5863308  T

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Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 401 - 504
Target Start/End: Original strand, 7486525 - 7486628
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaa 500  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||  | ||||||  ||||||||| |||||||||||||||||    
T  7486525 gcggtggaatgaaaggtgcatgcaggcacgttagcactccaacgctcaattcagtaatggaactgagaaagattgtgtagaaggtgttgtgaaaagtgaa 7486624  T
Q  501 tcat 504  Q
    ||||    
T  7486625 tcat 7486628  T

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Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 393 - 506
Target Start/End: Complemental strand, 9868058 - 9867945
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||||||||| ||||||||||  |||||| ||||||||||||  ||||||||||||||||||||  | || ||| || ||||||||||||||| |    
T  9868058 gagtcttcgcggtgggacgaaaggtgcatgcaggaacgttagcactctgacgctcaagtcagtaatggaactgaggaagagtttgtagaaagtgttgtta 9867959  T
Q  493 aaagtgaatcatac 506  Q
    ||||||||||||||    
T  9867958 aaagtgaatcatac 9867945  T

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Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 13292245 - 13292136
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| |  | | |||| |||||||  ||||||||    
T  13292245 gatgagtcttcgtggtggaaggaaaggtgtctgcaggtacgttagcactctaacgctcaagtcagtaatgaaactgaaaaagagtgtgtaagaagtgttg 13292146  T
Q  490 tgaaaagtga 499  Q
    ||||||||||    
T  13292145 tgaaaagtga 13292136  T

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Target: chr7; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 391 - 499
Target Start/End: Complemental strand, 16987213 - 16987105
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||||  || |||||| |||||||||| || |||||| |||||||  |||||||||    
T  16987213 atgagtcttcgcggtggaacgaaaggtgcatgcgggcacgttagcactctgacactcaagccagtaatggaattgagaaagagtgtgtaagaagtgttgt 16987114  T
Q  491 gaaaagtga 499  Q
    |||||||||    
T  16987113 gaaaagtga 16987105  T

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Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 534
Target Start/End: Original strand, 12644754 - 12644897
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgtt- 488  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||| ||||||| ||||||||||||  | |||||  |||||| |||||||||     
T  12644754 gatgagtcttcacggtggaacgaaaggtgcatgcaggcaagttagcactccgacgctcaggtcagtaatggaactgagaaaaagtgtgtggaaagtgttg 12644853  T
Q  489 gtgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctt 534  Q
    |||||||||||||  |  || |||||||||||||||  ||||||||    
T  12644854 gtgaaaagtgaat--tgtacgttgagggtgaagcaagttcaccctt 12644897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 504
Target Start/End: Original strand, 39879356 - 39879470
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||| |||||| |||||||||||||||| |||||| ||||||| ||||  ||||||||||||||||||| |  | |||||| ||||||| |||||||||    
T  39879356 gatgaatcttcgtggtggaacgaaaggtgcctgcagacacgttaacactttaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgttg 39879455  T
Q  490 tgaaaagtgaatcat 504  Q
    | |||||||||||||    
T  39879456 taaaaagtgaatcat 39879470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 5925585 - 5925526
Alignment:
Q  402 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5925585 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgatcaagtcagtaatgga 5925526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 390 - 451
Target Start/End: Original strand, 2226612 - 2226673
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagt 451  Q
    ||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  2226612 gatgaatcttcacggtgggacgaaaggtgtctgcaggcacattagcactccaacgctcaagt 2226673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 10287706 - 10287609
Alignment:
Q  402 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtga 499  Q
    ||||||||| ||||||  ||||||||||||||||||   |||||||||||||||||||||  | |||||  |||||||  ||||||||||||||||||    
T  10287706 cggtggaaccaaaggttcctgcaggcacgttagcaccttaacgctcaagtcagtaatggatctgagaaaaagtgtgtaagaagtgttgtgaaaagtga 10287609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 544
Target Start/End: Complemental strand, 43172114 - 43172006
Alignment:
Q  425 ggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaa 524  Q
    |||||||||||||||||| |||||||||| |||||||  | ||||||||         |||||||||||||||||||||||||  |||||||||||||||    
T  43172114 ggcacgttagcactccaatgctcaagtcaataatggaactgagaaagtg---------agtgttgtgaaaagtgaatcataca--ttgagggtgaagcaa 43172026  T
Q  525 agtcacccttacataggcgc 544  Q
      ||||||||| ||||||||    
T  43172025 cttcacccttatataggcgc 43172006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 26562891 - 26562942
Alignment:
Q  395 gtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgct 446  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  26562891 gtcttcacggtggaacgaaaggtgtctgcaggcacattagcactccaacgct 26562942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 393 - 541
Target Start/End: Complemental strand, 9573545 - 9573400
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||| |||||||||| |  |||| |||||||||||||||||||||||||| ||||||| ||  |||  | |||||| |||||||  ||||| || ||    
T  9573545 gagtctttgcggtggaacaaggggtgcctgcaggcacgttagcactccaacgcacaagtcaatatgggaactgagaaagagtgtgtaagaagtg-tggga 9573447  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
    ||  |||||||||||  |||  |||||||| |||||||||||| |||||    
T  9573446 aacatgaatcataca--ttggaggtgaagctaagtcacccttatatagg 9573400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 34854220 - 34854321
Alignment:
Q  398 ttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagt 497  Q
    |||| ||||||||||| ||||| ||||| |||||||||||||  |||||||||| ||||||| |  | |||||| |||||||  || |||||||||||||    
T  34854220 ttcgtggtggaacgaacggtgtttgcagacacgttagcactctgacgctcaagttagtaatgaaactgagaaagagtgtgtaagaaatgttgtgaaaagt 34854319  T
Q  498 ga 499  Q
    ||    
T  34854320 ga 34854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 467 - 615
Target Start/End: Original strand, 16203768 - 16203918
Alignment:
Q  467 gaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtgaagataa----ttccaa 562  Q
    ||||| ||||||| |||||||| ||||||||||| |||  || || ||||||||| ||||||||||||| ||||| ||||| |  |||||     |||      
T  16203768 gaaagagtgtgtataaagtgttatgaaaagtgaaccat--accttaagggtgaagaaaagtcacccttatataggagctcgcgttgataaccgtctccgt 16203865  T
Q  563 gttttgcagcgtgtgattaggaagcggttagaggacacatgaagggtgatcct 615  Q
    |||| |  ||||||||||||| |||||||||||||||| || |||||||||||    
T  16203866 gtttcgtggcgtgtgattagggagcggttagaggacacgtgtagggtgatcct 16203918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 27803358 - 27803403
Alignment:
Q  411 gaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  27803358 gaaagatgtctacaggcacgttagcactccaacgctcaagtcagta 27803403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 461
Target Start/End: Original strand, 18773961 - 18774021
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||||||||  |||||||||||||||||| | ||| |||| |||||||||||    
T  18773961 gcggtggaacgaaaggtgcatgcaggcacgttagcacttcgacgatcaaatcagtaatgga 18774021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 1979044 - 1979102
Alignment:
Q  403 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||| ||||||||||| ||||| ||||||||| ||||  ||||||||||||||||||||    
T  1979044 ggtgaaacgaaaggtgcctgcaagcacgttagtactctgacgctcaagtcagtaatgga 1979102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 543
Target Start/End: Complemental strand, 12004854 - 12004751
Alignment:
Q  437 ctccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttac 536  Q
    ||||||||||||| |||||| ||||  | |||| ||||||||| |||||| || ||||||| |||||| | |||||| |||||||| ||||||||||||     
T  12004854 ctccaacgctcaaatcagtattggaaatcagaaggtgtgtgtaaaaagtg-tgggaaaagtcaatcat-ccctttga-ggtgaagctaagtcacccttat 12004758  T
Q  537 ataggcg 543  Q
    |||||||    
T  12004757 ataggcg 12004751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 12163805 - 12163751
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctca 448  Q
    ||||||| |||||||||| | |||| ||| |||||||||||||||||||||||||    
T  12163805 agtcttcacggtggaacggagggtgcctgaaggcacgttagcactccaacgctca 12163751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 423 - 499
Target Start/End: Complemental strand, 5929100 - 5929024
Alignment:
Q  423 caggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtga 499  Q
    ||||||| ||||||||||||| |||||||||||||||||  | | | || | |||||  ||||||||||||||||||    
T  5929100 caggcacattagcactccaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtga 5929024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 615
Target Start/End: Original strand, 16204443 - 16204487
Alignment:
Q  571 gcgtgtgattaggaagcggttagaggacacatgaagggtgatcct 615  Q
    ||||||||||||| |||||||||||||||| || |||||||||||    
T  16204443 gcgtgtgattagggagcggttagaggacacgtgtagggtgatcct 16204487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 454
Target Start/End: Original strand, 4229848 - 4229891
Alignment:
Q  411 gaaaggtgtctgcaggcacgttagcactccaacgctcaagtcag 454  Q
    ||||||||| || |||||||||||||||| ||||||||||||||    
T  4229848 gaaaggtgtttgtaggcacgttagcactctaacgctcaagtcag 4229891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 486
Target Start/End: Original strand, 13159344 - 13159439
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaaga-aagtgtgtgtagaaagtg 486  Q
    |||||||| |||| || || ||| ||| |||||||||||||| |||||||| |||||| |||||| ||||  ||||| ||| ||||||| ||||||    
T  13159344 tgagtctttgcggcgggacaaaatgtgcctgcaggcacgttaacactccaatgctcaaatcagtattggaactaagagaagagtgtgtaaaaagtg 13159439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 452
Target Start/End: Original strand, 33799934 - 33799997
Alignment:
Q  390 gatgagtcttcgcggtgga-acgaaaggtgtctgcaggcacgttagcactccaacgctcaagtc 452  Q
    ||||||||||| ||||||| | ||||||||| |||||||||||||| |||| ||| ||||||||    
T  33799934 gatgagtcttcacggtggagatgaaaggtgtttgcaggcacgttagaactcgaaccctcaagtc 33799997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 541
Target Start/End: Original strand, 16204343 - 16204409
Alignment:
Q  473 gtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
    ||||||| |||||||||||||||||||| |||  || || ||||||||| ||| ||||||||| |||||    
T  16204343 gtgtgtataaagtgttgtgaaaagtgaaccat--accttaagggtgaagaaaattcacccttatatagg 16204409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 4e-62; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 390 - 615
Target Start/End: Complemental strand, 45258274 - 45258047
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||| |  ||||||||  ||||| ||||||||||    
T  45258274 gatgagtcttcgcggtggaacgaaagatgtctgcaggcacgttaacactccaaagctcaagtaagtaatgaaactaagaaagaatgtgtcgaaagtgttg 45258175  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtgaagataa----ttccaagttttgcagcgtgtgattaggaa 585  Q
    |||||||||||||||  || |||||||||||||||||||||||||| |||||  ||||||| |||||     ||| |||||||| ||||||||||||| |    
T  45258174 tgaaaagtgaatcat--accttgagggtgaagcaaagtcacccttatataggtcctcgtgacgataaccgtctccgagttttgcggcgtgtgattaggga 45258077  T
Q  586 gcggttagaggacacatgaagggtgatcct 615  Q
    |||||||||||||||||| |||||||||||    
T  45258076 gcggttagaggacacatgcagggtgatcct 45258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 328 - 535
Target Start/End: Complemental strand, 12127847 - 12127642
Alignment:
Q  328 tgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggc 427  Q
    |||| |||||||| ||||| |||| |||||||  ||||| ||| |||||  || | || |  |||| ||||||||||||| |||||||||  ||||||||    
T  12127847 tgatatgtccagtaaggatagatgagaggcaacattggcagaaaatgcttcggtacggtggtgatgggtcttcgcggtgggacgaaaggtacctgcaggc 12127748  T
Q  428 acgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagt 527  Q
    |||||||||||||||||||||||||||||||| |  |||||| ||||||||||||||||||||||||||||||||||  ||||||  |||||||||| ||    
T  12127747 acgttagcactccaacgctcaagtcagtaatgaaactaagaacgtgtgtgtagaaagtgttgtgaaaagtgaatcat--actttggtggtgaagcaatgt 12127650  T
Q  528 caccctta 535  Q
    || |||||    
T  12127649 caacctta 12127642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 394 - 544
Target Start/End: Original strand, 12168945 - 12169094
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgct-caagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||||    
T  12168945 agtctttgcggtggaacgaaaggtgtctgcaggcacattaacactccaacgcttcaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtga 12169044  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |||||||||  || || ||||||||||||||| | |||||||| ||||||||    
T  12169045 aaagtgaat--tataccttgagggtgaagcaatgccacccttaaataggcgc 12169094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 390 - 540
Target Start/End: Original strand, 36267467 - 36267615
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||||| |||||| |||||||| ||||| ||| |||| ||||||||||||||||||||||||| |  | |||||| |||||||||||| ||||    
T  36267467 gatgagtcttcgcagtggaatgaaaggtgcctgcatgcatgttaacactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagggttg 36267566  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacatag 540  Q
    |||||||||||||||  || |||||||||||||||  ||||||||| ||||    
T  36267567 tgaaaagtgaatcat--accttgagggtgaagcaagttcacccttatatag 36267615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 392 - 544
Target Start/End: Original strand, 3586334 - 3586484
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||| ||||||||| ||||||||  ||| |||||||||| ||||| ||||||||||||||||||||  | |||||  ||| |||||||||||||||    
T  3586334 tgagtctttgcggtggaatgaaaggtgcatgccggcacgttaggactccgacgctcaagtcagtaatggaactgagaaaaagtgagtagaaagtgttgtg 3586433  T
Q  492 aaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |||||||||||||  || |||||||||||||||  ||||||||| ||||||||    
T  3586434 aaaagtgaatcat--accttgagggtgaagcaagttcacccttatataggcgc 3586484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 390 - 534
Target Start/End: Original strand, 45714964 - 45715106
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |  | |||||| ||||||| ||||||| |    
T  45714964 gatgagtcttcctggtggaacgaaaggtgcatgcaggcacgttagcactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgtgg 45715063  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctt 534  Q
    |||||| ||||||||  || |||| |||||||| |||||||||||    
T  45715064 tgaaaattgaatcat--accttgaaggtgaagctaagtcaccctt 45715106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 396 - 506
Target Start/End: Original strand, 20120322 - 20120432
Alignment:
Q  396 tcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaa 495  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |  | |||||| |||||| ||||||| ||||| ||    
T  20120322 tcttcacggtggaacgaaaggtgtctgcaggcacgttagcactccgactctcaagtcagtaatgaaactgagaaagagtgtgtggaaagtggtgtgataa 20120421  T
Q  496 gtgaatcatac 506  Q
    |||||||||||    
T  20120422 gtgaatcatac 20120432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 328 - 544
Target Start/End: Complemental strand, 19919250 - 19919036
Alignment:
Q  328 tgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggc 427  Q
    |||| ||||| ||||| ||||||| ||||||||| |||| |||  ||||| || | || |  ||| |||||||| |||||||||||||||| |||||||     
T  19919250 tgatatgtccggtgagaatggatgagaggcaatggtggcagaaagtgctccggtatggtggcgatcagtcttcgtggtggaacgaaaggtgcctgcagga 19919151  T
Q  428 acgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagt 527  Q
    || |||| |||| |||||  |||||| |||||||  | |||||| || |||||||||||||||||||||||||||||  || |||||| ||||||||  |    
T  19919150 acattagaactctaacgccaaagtcaataatggaaatgagaaagagtatgtagaaagtgttgtgaaaagtgaatcat--accttgaggatgaagcaatat 19919053  T
Q  528 cacccttacataggcgc 544  Q
    ||| |||| ||||||||    
T  19919052 cactcttatataggcgc 19919036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 409 - 535
Target Start/End: Original strand, 24499777 - 24499901
Alignment:
Q  409 acgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacac 508  Q
    |||||||||| ||  ||| ||||||||||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||||||||||||||  ||    
T  24499777 acgaaaggtgcctctaggaacgttagcactccaacgctcaagtcagtaatggaaatgagaaagagtgtgtagaaaatgttgtgaaaagtgaatcat--ac 24499874  T
Q  509 tttgagggtgaagcaaagtcaccctta 535  Q
     || ||||||||||||  |||||||||    
T  24499875 cttaagggtgaagcaagttcaccctta 24499901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 391 - 540
Target Start/End: Complemental strand, 27846640 - 27846493
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    |||||||||||| || | |||||| ||| ||||||||||||||||||||||||| ||||||||||||||||  | |||||  || |||||||||||||||    
T  27846640 atgagtcttcgcagttggacgaaaagtgcctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgagaaacagtttgtagaaagtgttgt 27846541  T
Q  491 gaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacatag 540  Q
    | |||||||||  |  || ||||||||||||  ||||||||| |||||||    
T  27846540 gtaaagtgaat--tgtaccttgagggtgaagttaagtcacccatacatag 27846493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 15825126 - 15825230
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||   ||||||||||| ||||||||  | |||||| ||||||||||||||||||||    
T  15825126 gagtctttgtggtggaacgaaatgtgtctgcaggcacgttagcactttgacgctcaagtcggtaatggaactgagaaagagtgtgtagaaagtgttgtga 15825225  T
Q  493 aaagt 497  Q
    |||||    
T  15825226 aaagt 15825230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 390 - 544
Target Start/End: Original strand, 29710987 - 29711137
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| ||||||| ||  ||||| | |||||  ||||||||    
T  29710987 gatgcgtcttcgcggtggaacaaaaggtgtatgcatgcacgttagcactccaacgctcaagtcactaatggaatt--gaaagagagtgtacgaagtgttg 29711084  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||||||    |  || |||||||||||||||  ||||||||| ||||||||    
T  29711085 tgaaaagtga--tgtgtaccttgagggtgaagcaagttcacccttatataggcgc 29711137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 10923283 - 10923177
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    |||||||||||||||||||||||||| || |||||||||| |||||| || ||||||||||| |||||  | | |||| |||||||||||||| ||||||    
T  10923283 agtcttcgcggtggaacgaaaggtgtatgtaggcacgttatcactccgacactcaagtcagttatggaacttataaagagtgtgtagaaagtgctgtgaa 10923184  T
Q  494 aagtgaa 500  Q
    |||||||    
T  10923183 aagtgaa 10923177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 405 - 499
Target Start/End: Original strand, 18770296 - 18770392
Alignment:
Q  405 tggaacgaaaggtgtctgca--ggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtga 499  Q
    |||||||||||||| || ||  |||||||||||||||  |||||||||||||||||| | || |||||| |||||||||||||||||||||||||||    
T  18770296 tggaacgaaaggtgcctacataggcacgttagcactctgacgctcaagtcagtaatgaaattgagaaagagtgtgtagaaagtgttgtgaaaagtga 18770392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 19050557 - 19050448
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||| |||||||||||||||||||| | ||||| | |||||||||||  ||||||||||||||||| ||  |||||||| | |||||  ||||||||    
T  19050557 gatgagtgttcgcggtggaacgaaaggtatttgcagacccgttagcactctgacgctcaagtcagtaatagaactaagaaagagagtgtaagaagtgttg 19050458  T
Q  490 tgaaaagtga 499  Q
    ||||||||||    
T  19050457 tgaaaagtga 19050448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 390 - 499
Target Start/End: Original strand, 29137870 - 29137979
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||| ||| ||||||||||||| |||||||||| |||||||||| || |||||||||||| ||||| |  | |||||| |||||||  || |||||    
T  29137870 gatgagtcatcgaggtggaacgaaagatgtctgcaggtacgttagcacaccgacgctcaagtcattaatgcaactgagaaagagtgtgtaagaaatgttg 29137969  T
Q  490 tgaaaagtga 499  Q
    || |||||||    
T  29137970 tggaaagtga 29137979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 408 - 540
Target Start/End: Original strand, 18772239 - 18772365
Alignment:
Q  408 aacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcataca 507  Q
    |||||||||||| |||||||||||||||||||  | ||||||   |||||||||  |||||    |||||||||||||||||||||||||||  | | ||    
T  18772239 aacgaaaggtgtttgcaggcacgttagcactctgatgctcaaagtagtaatggaactaaga----gtgtgtagaaagtgttgtgaaaagtga--cgtgca 18772332  T
Q  508 ctttgagggtgaagcaaagtcacccttacatag 540  Q
    | |||||||||||||||  ||||||||| ||||    
T  18772333 ccttgagggtgaagcaagttcacccttatatag 18772365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 392 - 499
Target Start/End: Original strand, 18135842 - 18135949
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    ||||||||| |||||| | |||||||| ||| ||||||||||| ||||  |||||||||| |||||||||  | |||||| |||||||  |||||||||     
T  18135842 tgagtcttcacggtgggatgaaaggtgcctgtaggcacgttagtactctgacgctcaagttagtaatggaactgagaaagagtgtgtaagaagtgttgtc 18135941  T
Q  492 aaaagtga 499  Q
    ||||||||    
T  18135942 aaaagtga 18135949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 455
Target Start/End: Original strand, 17671942 - 17672007
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| |||||| |||||| |||||    
T  17671942 gatgagtcttcatggtggaacgaaaggtgtctgcagacacgttagcgctccaatgctcaaatcagt 17672007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 394 - 502
Target Start/End: Original strand, 24755441 - 24755549
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    |||||||| | ||||||||||| ||  | || ||||||||| |||||||| ||||||||||| |||||  |  ||||  ||||||||||| |||||||||    
T  24755441 agtcttcgtgttggaacgaaagttgcatacaagcacgttagtactccaaccctcaagtcagtgatggaactctgaaaaagtgtgtagaaattgttgtgaa 24755540  T
Q  494 aagtgaatc 502  Q
    |||||||||    
T  24755541 aagtgaatc 24755549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 544
Target Start/End: Complemental strand, 15390707 - 15390555
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||||| ||||||||||| || ||   ||||||||||||||   |||||||||| ||| |||||  ||| |||  |||||||  ||||||||    
T  15390707 gatgagtcttcgcgatggaacgaaagctgcctattggcacgttagcactttgacgctcaagtaagtgatggaactaataaacagtgtgtaagaagtgttg 15390608  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||||||    |  || |||||||||||||||  ||||||||| ||||||||    
T  15390607 tgaaaagtga--tgtgtaccttgagggtgaagcaagttcacccttatataggcgc 15390555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 486
Target Start/End: Original strand, 30638534 - 30638628
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtg 486  Q
    |||||| ||||||||||| ||||| ||||| ||| ||||||| |||| | ||||||| ||||||||||||  |||||||| ||| || |||||||    
T  30638534 tgagtcatcgcggtggaaagaaagatgtctacagacacgttaacacttcgacgctcatgtcagtaatggaactaagaaagagtgcgtggaaagtg 30638628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 390 - 455
Target Start/End: Original strand, 17626870 - 17626935
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    ||||||||||   ||||||||||||||||||||||| ||||||||| |||||| |||||| |||||    
T  17626870 gatgagtctttatggtggaacgaaaggtgtctgcagacacgttagctctccaatgctcaaatcagt 17626935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 26713632 - 26713591
Alignment:
Q  415 ggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  26713632 ggtgtctgcaggcacgttagcactccaacactcaagtcagta 26713591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 24157413 - 24157357
Alignment:
Q  405 tggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||| || || ||||||||||||||  ||||||||||||||||||||    
T  24157413 tggaacgaaaggtgcctacatgcacgttagcactctgacgctcaagtcagtaatgga 24157357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 461
Target Start/End: Original strand, 24318893 - 24318953
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||||| | ||||||||||||||||| ||| ||| |||||| |||||||||    
T  24318893 gcggtggaacgaaaggcgcctgcaggcacgttagcattccgacgatcaagttagtaatgga 24318953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 28426233 - 28426178
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    |||||||||||||||||| |||||||||| |||||||||| | | |||||||||||    
T  28426233 gcggtggaacgaaaggtgcctgcaggcacattagcactccgatgatcaagtcagta 28426178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 17560744 - 17560797
Alignment:
Q  402 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    ||||| || ||| ||||||||||||||||||||||  |||||||||||||||||    
T  17560744 cggtgaaatgaagggtgtctgcaggcacgttagcagcccaacgctcaagtcagt 17560797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 403 - 455
Target Start/End: Original strand, 12634828 - 12634880
Alignment:
Q  403 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    ||||||||||||||||  ||||||||||||| ||||||||| || ||||||||    
T  12634828 ggtggaacgaaaggtgcatgcaggcacgttaacactccaactcttaagtcagt 12634880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 706
Target Start/End: Original strand, 18134526 - 18134593
Alignment:
Q  639 ggtgcaataaagctggcgtattccttcagacacgggaccttaaggcggtgcaaatatgggccacgtgt 706  Q
    |||||| ||||| |||| ||||||||||| | |||| |||||||||||||||| | | ||||||||||    
T  18134526 ggtgcactaaagttggcatattccttcaggcgcggggccttaaggcggtgcaagtttaggccacgtgt 18134593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 36022447 - 36022496
Alignment:
Q  407 gaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    ||||||||||| | || |||||||||| ||||| ||||||||||||||||    
T  36022447 gaacgaaaggtatatgtaggcacgttaacactctaacgctcaagtcagta 36022496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 449
Target Start/End: Original strand, 40800099 - 40800152
Alignment:
Q  396 tcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaa 449  Q
    ||||| |||||||||||||||||  || ||||||||||||||| ||||| ||||    
T  40800099 tcttcacggtggaacgaaaggtgaatgtaggcacgttagcacttcaacgttcaa 40800152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 2e-48; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 333 - 550
Target Start/End: Original strand, 19809614 - 19809828
Alignment:
Q  333 tgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgtt 432  Q
    ||||||||||||||||||   |||||| | ||| ||||| |||||||| | || || |||||||||||||||| || ||||||||  |||||| || |||    
T  19809614 tgtccagtgaggatggataaaaggcaacggtggtggaatgtgctctggtacggtgacgatgagtcttcgcggttga-cgaaaggttcctgcagacatgtt 19809712  T
Q  433 agcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcaccc 532  Q
    ||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||  || || ||||||||||| | |||||||||    
T  19809713 agcactccaacgctcaagtcagtaatgaaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaat--tataccttgagggtgaaactaagtcaccc 19809810  T
Q  533 ttacataggcgctcgtga 550  Q
    |||||||||||| |||||    
T  19809811 ttacataggcgcgcgtga 19809828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 390 - 544
Target Start/End: Original strand, 12683754 - 12683906
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |  | |||||| |||||||||||||||||    
T  12683754 gatgagtctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagttagtaatgaaactgagaaagagtgtgtagaaagtgttg 12683853  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |||||||||||||||  || || ||||||||||||  |||||||||  |||||||    
T  12683854 tgaaaagtgaatcat--accttaagggtgaagcaagttcacccttatctaggcgc 12683906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 393 - 544
Target Start/End: Original strand, 47253249 - 47253398
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||| ||||| || |||||||  |||||||| ||||||||||||||||||||||||||||||||  | |||||| ||||||| ||||||||||||    
T  47253249 gagtcttcggggtgggacaaaaggtgcttgcaggcatgttagcactccaacgctcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgttgtga 47253348  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||||||||  || ||||||||||||| |||||||||||| ||||||||    
T  47253349 aaagtgaatcat--accttgagggtgaagctaagtcacccttatataggcgc 47253398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 327 - 507
Target Start/End: Original strand, 10981772 - 10981951
Alignment:
Q  327 ttgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcagg 426  Q
    |||||||||||  |||||||||||| |||||||   ||| ||||| |||||  | | || || ||||||||||||| |||| |||||||||| ||||||     
T  10981772 ttgatctgtccgatgaggatggatgagaggcaacaatggtggaatgtgctccagtacggtgatgatgagtcttcgcagtgggacgaaaggtgcctgcagc 10981871  T
Q  427 cacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcataca 507  Q
     ||||| |||||||||| |||||||||||||||||    |||||| ||||||| |||||| || |||||||||||||||||    
T  10981872 aacgttggcactccaacactcaagtcagtaatggaaccgagaaagagtgtgtaaaaagtg-tgggaaaagtgaatcataca 10981951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 15514678 - 15514574
Alignment:
Q  395 gtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaa 494  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||  | | |||| |||||||  |||||||||| ||    
T  15514678 gtcttcgcggtggaacgaagggtgcctgtaggcacgttagcactccaacgctcaagtcagtaatggaactgaaaaagagtgtgtaagaagtgttgtggaa 15514579  T
Q  495 agtga 499  Q
    |||||    
T  15514578 agtga 15514574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 392 - 543
Target Start/End: Original strand, 19643673 - 19643822
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||||| | ||||||| |||||| | ||||| |||||| || ||| ||||| ||||||||||||||  | |||||| ||||||||||||| |||||    
T  19643673 tgagtcttcgtgatggaacggaaggtgcccgcaggtacgttaccaatccgacgcttaagtcagtaatggaactgagaaagagtgtgtagaaagtcttgtg 19643772  T
Q  492 aaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcg 543  Q
    |||||||||||||  || ||||||||||| |||  ||||||||| |||||||    
T  19643773 aaaagtgaatcat--accttgagggtgaaacaagttcacccttatataggcg 19643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 15742275 - 15742166
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||| |||||| ||||||||| |||| |||||||||||||||  ||||||||||||||||||||  | |||||  |||||||  ||||||||    
T  15742275 gatgagtcttcgtggtggagcgaaaggtgcctgctggcacgttagcactcttacgctcaagtcagtaatggaactgagaaaaagtgtgtaagaagtgttg 15742176  T
Q  490 tgaaaagtga 499  Q
    ||||||||||    
T  15742175 tgaaaagtga 15742166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 401 - 544
Target Start/End: Original strand, 29157082 - 29157223
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaa 500  Q
    ||||||||||||||||||  ||||| |||||| |||||||||||||||||| |||||||||  | |||||  |||||||| |||||||||| ||||||||    
T  29157082 gcggtggaacgaaaggtgcatgcagacacgtttgcactccaacgctcaagttagtaatggaactgagaaaaagtgtgtagtaagtgttgtgtaaagtgaa 29157181  T
Q  501 tcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
     |||  || |||| ||||||| ||  ||||||||| ||||||||    
T  29157182 ccat--accttgatggtgaagtaagttcacccttatataggcgc 29157223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 322 - 506
Target Start/End: Original strand, 19818595 - 19818778
Alignment:
Q  322 atgcattgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtct 421  Q
    ||||||| || |||||  |||||||||||   |||||| | ||| ||||| |||||||| | || || |||||||||||||||||| |||||||||  ||    
T  19818595 atgcattcatatgtccgatgaggatggataaaaggcaacggtggtggaatgtgctctggtacggtgacgatgagtcttcgcggtgg-acgaaaggttcct 19818693  T
Q  422 gcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatac 506  Q
     |||  | ||||||||||||||||||||||||||| |  |   ||  ||| ||||||||||||||||||||||||||||| ||||    
T  19818694 acagatatgttagcactccaacgctcaagtcagtacttaaaccaatcaagagtgtgtagaaagtgttgtgaaaagtgaattatac 19818778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 340 - 452
Target Start/End: Original strand, 3981869 - 3981981
Alignment:
Q  340 tgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactc 439  Q
    |||||||||||| ||||||| | |||||||| ||| || || |  | || ||||||||||| |||||||||||||||||  |||| ||||||||||||||    
T  3981869 tgaggatggatgagaggcaacggtggcggaaaatgttccggtacagtgaggatgagtcttcacggtggaacgaaaggtgcatgcatgcacgttagcactc 3981968  T
Q  440 caacgctcaagtc 452  Q
    |||| ||||||||    
T  3981969 caacactcaagtc 3981981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 394 - 544
Target Start/End: Original strand, 5518513 - 5518661
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    |||||||||  ||||||||||||||  ||||| |||||||||||| ||||||||||||||||||| ||  | ||| ||  ||||||  |||||||||| |    
T  5518513 agtcttcgcaatggaacgaaaggtgagtgcagacacgttagcacttcaacgctcaagtcagtaattgaactgagagagaatgtgtaagaagtgttgtgga 5518612  T
Q  494 aagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||  | |  || |||||||||||||||  ||||||||| ||||||||    
T  5518613 aagtgatgcgt--accttgagggtgaagcaagttcacccttatataggcgc 5518661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 407 - 498
Target Start/End: Complemental strand, 14602120 - 14602029
Alignment:
Q  407 gaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtg 498  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |  | | | || |||||||  |||||||||||||||||    
T  14602120 gaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtg 14602029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 401 - 506
Target Start/End: Complemental strand, 2674681 - 2674580
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaa 500  Q
    |||||||  |||||||||| ||||| || |||||||||||||||| ||||||| ||||| |  | |||    ||||||||||||||||||||||||||||    
T  2674681 gcggtggggcgaaaggtgtatgcagtcatgttagcactccaacgcacaagtcaataatgtaactgaga----gtgtgtagaaagtgttgtgaaaagtgaa 2674586  T
Q  501 tcatac 506  Q
    ||||||    
T  2674585 tcatac 2674580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 392 - 503
Target Start/End: Complemental strand, 14003184 - 14003073
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||| |||||||||||||||||  ||| ||  |||||||||||   ||||||||||||||||||||  | |||||| || ||| ||||||||| ||    
T  14003184 tgagtctttgcggtggaacgaaaggttcctgaagcaacgttagcactatgacgctcaagtcagtaatggaactgagaaagagtttgtggaaagtgttatg 14003085  T
Q  492 aaaagtgaatca 503  Q
    |||| |||||||    
T  14003084 aaaaatgaatca 14003073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 407 - 461
Target Start/End: Original strand, 13171065 - 13171119
Alignment:
Q  407 gaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  13171065 gaacgaaaggtgcttgcaggcacgttagcactccaactctcaagtcagtaatgga 13171119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 401 - 461
Target Start/End: Original strand, 17110678 - 17110738
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||| ||| ||||| ||||||||||||||| ||| ||||||||||||||||    
T  17110678 gcggtggaacgaaatgtgcctgcaagcacgttagcactccgacgatcaagtcagtaatgga 17110738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 461
Target Start/End: Complemental strand, 16012588 - 16012522
Alignment:
Q  395 gtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||| ||| || ||||| |||  |||||||||||||| |||||| ||||||||||||||||||||    
T  16012588 gtcttcacggagggacgaatggtacctgcaggcacgttaacactccgacgctcaagtcagtaatgga 16012522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 1638425 - 1638369
Alignment:
Q  404 gtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||||| ||||| ||| |||||||||| ||| ||||||||||||||||    
T  1638425 gtggaacgaaaggtgtttgcag-cactttagcactccgacgatcaagtcagtaatgga 1638369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 461
Target Start/End: Original strand, 12415437 - 12415476
Alignment:
Q  422 gcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  12415437 gcaggcacgttagcactccaacgatcaagtaagtaatgga 12415476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 455
Target Start/End: Original strand, 19563945 - 19563996
Alignment:
Q  404 gtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    |||| |||||||||| ||||||||||||||||||| | ||| ||||||||||    
T  19563945 gtgggacgaaaggtgcctgcaggcacgttagcactgcgacgatcaagtcagt 19563996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 391 - 453
Target Start/End: Complemental strand, 19473672 - 19473610
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtca 453  Q
    |||||| |||||||||| || |||||||| |  | ||||||||| ||||||||||||||||||    
T  19473672 atgagttttcgcggtgggacaaaaggtgtttataagcacgttagaactccaacgctcaagtca 19473610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 741
Target Start/End: Original strand, 47253522 - 47253604
Alignment:
Q  659 ttccttcagacacgggaccttaaggcggtgcaaatatgggccacgtgtcaacatggaattcgtctattgatcgatccaaaaca 741  Q
    ||||||||||| |||  |||||||||||||||| | ||| |||||||||||| ||| |||  |||  ||||||||||| ||||    
T  47253522 ttccttcagacgcggagccttaaggcggtgcaagtttggaccacgtgtcaacgtgggattgttcttctgatcgatccagaaca 47253604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 543
Target Start/End: Complemental strand, 50151808 - 50151775
Alignment:
Q  510 ttgagggtgaagcaaagtcacccttacataggcg 543  Q
    |||||||||||||||||||||||||| |||||||    
T  50151808 ttgagggtgaagcaaagtcacccttatataggcg 50151775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 2e-39; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 481 - 632
Target Start/End: Complemental strand, 23497194 - 23497042
Alignment:
Q  481 aaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtgaagataat----tccaagttttgcagcgtgt 576  Q
    ||||||||||||| ||||||||||||   |||||||| ||||||||||||||||| |||||||||||||||||||||    |||  |||||||| |||||    
T  23497194 aaagtgttgtgaatagtgaatcatacc--ttgagggttaagcaaagtcacccttatataggcgctcgtgaagataattgtctccgggttttgca-cgtgt 23497098  T
Q  577 gattaggaagcggttagaggacacatgaagggtgatcctaacgtgaaggcgtgctt 632  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  23497097 gattagggagcggttagaggacacatgcagggtgatcctcacgtgaaggcgtgctt 23497042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 391 - 543
Target Start/End: Original strand, 30477611 - 30477761
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    ||||| ||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||||||| | |  | |||||| ||||||||||||||||||    
T  30477611 atgagacttcgcggtgagacgaaagatgtctgcatgcacgttagcactccaacgctcaagtcagtaacgaaactgagaaagagtgtgtagaaagtgttgt 30477710  T
Q  491 gaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcg 543  Q
    ||||||||||||||  || |||||||||||| || |||||||||| |||||||    
T  30477711 gaaaagtgaatcat--accttgagggtgaagtaatgtcacccttatataggcg 30477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 393 - 542
Target Start/End: Original strand, 18322915 - 18323062
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    |||||||||||||||||| |||||||  ||||| || |||| |||||||||||||||||||||||| ||  | ||||||  |||||||||| ||||||||    
T  18322915 gagtcttcgcggtggaacaaaaggtgcatgcagacatgttaacactccaacgctcaagtcagtaatagaactgagaaagattgtgtagaaaatgttgtga 18323014  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggc 542  Q
    |||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  18323015 aaagtgaatcataca--ttgaggatgaagcaaggtcacccttatataggc 18323062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 391 - 506
Target Start/End: Original strand, 24507427 - 24507542
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||| |||||||| |||||||  | |||||| |||| |||||||||||||    
T  24507427 atgagtctttgcggtggagcgaaaggtgtctgcatgcacgttagtactccaacgatcaagtcaataatggaaatgagaaagagtgtctagaaagtgttgt 24507526  T
Q  491 gaaaagtgaatcatac 506  Q
    ||||||||||||||||    
T  24507527 gaaaagtgaatcatac 24507542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 393 - 542
Target Start/End: Original strand, 13754730 - 13754877
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||||  ||| |||||||||| |||| ||||||||| |||| || ||||||||||||||||| |  | |||||| |||||||||||||||||||     
T  13754730 gagtcttcgcaatgggacgaaaggtgcctgctggcacgttaacactacatcgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgt 13754829  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggc 542  Q
    |||||||||| |  || ||||||||||||| ||||||| |||| ||||||    
T  13754830 aaagtgaatcct--accttgagggtgaagctaagtcactcttatataggc 13754877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 336 - 486
Target Start/End: Original strand, 23269161 - 23269311
Alignment:
Q  336 ccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagc 435  Q
    |||||||| ||||||  ||||||||  | |||||| ||||||||| | || |  |||||||||| ||||||||||||||||||||| |||||| ||||||    
T  23269161 ccagtgagtatggataagaggcaatagttgcggaaaatgctctggtacggtggcgatgagtctttgcggtggaacgaaaggtgtctacaggcaagttagc 23269260  T
Q  436 actccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtg 486  Q
    |||||||| || ||||||||||||||  | | |||| ||||||||||||||    
T  23269261 actccaacacttaagtcagtaatggaactgataaagagtgtgtagaaagtg 23269311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 391 - 544
Target Start/End: Complemental strand, 3459604 - 3459454
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgtt-g 489  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||  |||||||||||||||||||  | || ||| |||||||||||||||| |    
T  3459604 atgagtcttcgcggtggg-cgaaaggtgcctgcaggcacgttagcactccggcgctcaagtcagtaatggaactgagcaagagtgtgtagaaagtgttgg 3459506  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |||||||| |||| |  || |||| ||||||||||  ||||||||| ||||||||    
T  3459505 tgaaaagtaaatcgt--accttga-ggtgaagcaagttcacccttatataggcgc 3459454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 410 - 544
Target Start/End: Complemental strand, 17698387 - 17698255
Alignment:
Q  410 cgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacact 509  Q
    |||||||||||||| || ||||||||| ||||||   |||||||||||||||    |||||| |||||||||||||||||||||||||||||  || |||    
T  17698387 cgaaaggtgtctgcgggtacgttagcattccaacatgcaagtcagtaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgaat--tatact 17698290  T
Q  510 ttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||||||||||| | ||||| || ||||||||    
T  17698289 ttgagggtgaagcaaggccacccatatataggcgc 17698255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 393 - 550
Target Start/End: Original strand, 13764961 - 13765116
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||||||||  |||||||||||||||||||||||||  ||||||| | |||||| ||||||| |  | |||||| |||||||||||||||||||     
T  13764961 gagtcttcgcggtgtgacgaaaggtgtctgcaggcacgttaagactccaatgttcaagtgagtaatgaaactgagaaagagtgtgtagaaagtgttgtgt 13765060  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtga 550  Q
    ||||||||| ||     |||| |||||||| |||||||||||| ||| |||| |||||    
T  13765061 aaagtgaataat--gtcttgaaggtgaagctaagtcacccttaaataagcgcgcgtga 13765116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 393 - 544
Target Start/End: Complemental strand, 26917017 - 26916868
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||| | ||||||||||||||  |  |||||||||||| | | |||||||||||||||||||||  | ||| || ||||||||||||||||||||    
T  26917017 gagtcttcgtgatggaacgaaaggtgcatttaggcacgttagcgcactaacgctcaagtcagtaatggaactgagagagagtgtgtagaaagtgttgtga 26916918  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||| ||||  || |||||  |||||||| ||| |||||| ||||||||    
T  26916917 aaagtgagtcat--accttgagcatgaagcaatgtcgcccttatataggcgc 26916868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 392 - 534
Target Start/End: Original strand, 21416709 - 21416849
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    ||||| |||||| |||| |  |||||||||||| || |||||||||||| |||||||||||||||||| |  | |||||| |||||||||||||||||||    
T  21416709 tgagtattcgcgatggatctgaaggtgtctgcatgctcgttagcactccgacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtg 21416808  T
Q  492 aaaagtgaatcatacactttgagggtgaagcaaagtcaccctt 534  Q
    |||| |||||| |  || || ||||||||||||  ||||||||    
T  21416809 aaaaatgaatcgt--accttaagggtgaagcaagttcaccctt 21416849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 535
Target Start/End: Original strand, 15058004 - 15058147
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||| | ||||||||||||||||  |||||||||||||||||| |||||| ||||| ||||||| | || |||||   |||||||||||||| |    
T  15058004 gatgagtctttgtggtggaacgaaaggtgcatgcaggcacgttagcactacaacgcacaagttagtaatgaaattgagaaaaaatgtgtagaaagtgtgg 15058103  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    |||||| | ||||||  || ||||||||||| ||| ||||| ||||    
T  15058104 tgaaaaataaatcat--accttgagggtgaaacaacgtcacactta 15058147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 6928174 - 6928096
Alignment:
Q  428 acgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatac 506  Q
    ||||||||| | |||| |||||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||    
T  6928174 acgttagcatttcaacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatac 6928096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 390 - 535
Target Start/End: Complemental strand, 17927826 - 17927683
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||| |||| | ||||| ||||||||||  |||| ||||||||||||||||||||| ||||||||||||||  | |||  | || |||||||||||||     
T  17927826 gatgactctttgtggtgggacgaaaggtgcatgcatgcacgttagcactccaacgcttaagtcagtaatggaactgagattgagtatgtagaaagtgtta 17927727  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    ||||| |||||||||  || || |||||||||||| | ||||||||    
T  17927726 tgaaaggtgaatcat--accttaagggtgaagcaatgccaccctta 17927683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 420 - 544
Target Start/End: Original strand, 5859814 - 5859936
Alignment:
Q  420 ctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtga 519  Q
    |||||| ||||||||||||||||||||||||||| |||||||  |||||||  |||||| || |||||| ||| ||||||||| |  || |||||  |||    
T  5859814 ctgcagacacgttagcactccaacgctcaagtcaataatggaactaagaaatagtgtgttgagagtgttttgagaagtgaatcgt--accttgagattga 5859911  T
Q  520 agcaaagtcacccttacataggcgc 544  Q
    ||||| |||||||||| ||||||||    
T  5859912 agcaaggtcacccttatataggcgc 5859936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 404 - 497
Target Start/End: Complemental strand, 24576691 - 24576598
Alignment:
Q  404 gtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagt 497  Q
    ||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||  ||| || | |||||||  ||||||||||||||||    
T  24576691 gtggaacgaaaggtgcctgcaggcacgttaacactctgacgctcaagtcagtaatggaactaaaaatgagtgtgtaagaagtgttgtgaaaagt 24576598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 435 - 505
Target Start/End: Original strand, 24070866 - 24070936
Alignment:
Q  435 cactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcata 505  Q
    ||||||||| || ||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||    
T  24070866 cactccaacacttaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgagaagtgaatcata 24070936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 401 - 461
Target Start/End: Complemental strand, 14666950 - 14666890
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||    
T  14666950 gcggtggaacaaaaggtgcctgcaggcacgttagcactccgacgatcaagtcaataatgga 14666890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 20055548 - 20055603
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgc 445  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  20055548 gatgaatcttcgcggtggaacgaagggtgtctgcaggcacgttagtactccgacgc 20055603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 461
Target Start/End: Complemental strand, 24677709 - 24677638
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||| ||||| |||||| |||| ||||| ||| ||||||||||||| ||||||||||||| ||||    
T  24677709 gatgagtcttcacggtgaaacgaagggtggctgcaagcatgttagcactccaatgctcaagtcagtattgga 24677638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 459
Target Start/End: Complemental strand, 4565504 - 4565446
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatg 459  Q
    |||||||||||||||||||||||||||| ||||||||||| ||  |||||| |||||||    
T  4565504 gcggtggaacgaaaggtgtctgcaggcatgttagcactccgacaatcaagttagtaatg 4565446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 11776358 - 11776298
Alignment:
Q  389 agatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaa 449  Q
    |||||||| || ||||||| ||||||| ||| |||||||||||||||||||| ||||||||    
T  11776358 agatgagtatttgcggtgggacgaaagatgtttgcaggcacgttagcactccgacgctcaa 11776298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 446
Target Start/End: Complemental strand, 23497257 - 23497201
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgct 446  Q
    |||||||||| || |||||||||||||| |||||| ||| |||||||||||||||||    
T  23497257 gatgagtctttgcagtggaacgaaaggtatctgcacgcatgttagcactccaacgct 23497201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 1909827 - 1909761
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatg 459  Q
    ||||||| || |||||||||||||||  ||||| |||||||||| | ||||||| ||||||||||||    
T  1909827 gagtctttgcagtggaacgaaaggtgcatgcagacacgttagcatttcaacgctaaagtcagtaatg 1909761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 8490093 - 8490046
Alignment:
Q  408 aacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    ||||||||||||||||| ||||||||  |||||||||| |||||||||    
T  8490093 aacgaaaggtgtctgcaagcacgttaatactccaacgcccaagtcagt 8490046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 476 - 506
Target Start/End: Original strand, 7220617 - 7220647
Alignment:
Q  476 tgtagaaagtgttgtgaaaagtgaatcatac 506  Q
    |||||||||||||||||||||||||||||||    
T  7220617 tgtagaaagtgttgtgaaaagtgaatcatac 7220647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 436
Target Start/End: Complemental strand, 17319744 - 17319698
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagca 436  Q
    |||||||||||| ||||||||||||||||  |||||||| |||||||    
T  17319744 gatgagtcttcgtggtggaacgaaaggtgcatgcaggcatgttagca 17319698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 615
Target Start/End: Complemental strand, 6928045 - 6927989
Alignment:
Q  558 tccaagttttgcagcgtgtgattaggaagcggttagaggacacatgaagggtgatcct 615  Q
    |||| ||||||||||||||||||||||| |||| ||||||||| || || ||||||||    
T  6928045 tccaggttttgcagcgtgtgattaggaa-cggtaagaggacacgtgtagagtgatcct 6927989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 22454351 - 22454290
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    ||||||| | |||||||| | |||| ||| ||||||||| |||||||||||| |||||||||    
T  22454351 agtcttcacagtggaacggagggtgcctgtaggcacgttggcactccaacgcccaagtcagt 22454290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 2e-39; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 393 - 600
Target Start/End: Complemental strand, 27083356 - 27083148
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||| | |  |  ||||| ||||||||||||||||||||    
T  27083356 gagtcttcgcggtagaacgaaatgtgtctgcagacacgttagcactccaacactcaagtcagtaa-gaaactgtgaaagagtgtgtagaaagtgttgtga 27083258  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtgaagataa----ttccaagttttgcagcgtgtgattaggaagcg 588  Q
    ||||||||||||  || ||||||||||||  ||||||||||| ||||||||| |||||  ||||     |||| ||||||| ||||||||||||  |||     
T  27083257 aaagtgaatcat--accttgagggtgaagttaagtcacccttgcataggcgcgcgtgagaataactgtctccaggttttgcggcgtgtgattagagagca 27083160  T
Q  589 gttagaggacac 600  Q
    ||||||||||||    
T  27083159 gttagaggacac 27083148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 328 - 535
Target Start/End: Original strand, 22903000 - 22903205
Alignment:
Q  328 tgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggc 427  Q
    ||||||||||  |||||||||||| ||||||| ||||||||||  ||||   | | || |  ||||||| |||||||||||||||||||| |  | ||||    
T  22903000 tgatctgtccgatgaggatggatgagaggcaacgttggcggaaagtgcttcagtacggtggtgatgagttttcgcggtggaacgaaaggttttcgtaggc 22903099  T
Q  428 acgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagt 527  Q
    | ||||||||| ||||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||  || ||||||||||| |||  |    
T  22903100 atgttagcacttcaacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcat--accttgagggtgaaacaatat 22903197  T
Q  528 caccctta 535  Q
    ||||||||    
T  22903198 caccctta 22903205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 412 - 544
Target Start/End: Complemental strand, 26994706 - 26994576
Alignment:
Q  412 aaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacacttt 511  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||||| || |||||| |||| ||||| |||||||||||||||||||||  || ||    
T  26994706 aaaggtgtcttcagacacgttagcactccgacgctcaagtcagtaatggaattgagaaagagtgtttagaaggtgttgtgaaaagtgaatcat--acctt 26994609  T
Q  512 gagggtgaagcaaagtcacccttacataggcgc 544  Q
    | ||||||||||| |||||||||| ||||||||    
T  26994608 gggggtgaagcaaggtcacccttatataggcgc 26994576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 340 - 540
Target Start/End: Original strand, 8938829 - 8939028
Alignment:
Q  340 tgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcg--cggtggaacgaaaggtgtctgcaggcacgttagcac 437  Q
    |||||||||||| ||||||||| ||||||||  |||||||| | || |  |||||||||| |  |||| ||||||||||||  ||||||||||||| |||    
T  8938829 tgaggatggatgagaggcaatggtggcggaaagtgctctggtacggtggcgatgagtctttgtgcggtagaacgaaaggtgcatgcaggcacgttaacac 8938928  T
Q  438 tccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttaca 537  Q
    ||||| |||| |||||||| ||||  | |||||| ||||||| |||||| || |||||||||||||||||  ||||||||||||| |||||||| ||| |    
T  8938929 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgggaaaagtgaatcataca--ttgagggtgaagctaagtcaccgttata 8939025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 339 - 550
Target Start/End: Original strand, 20025201 - 20025410
Alignment:
Q  339 gtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcact 438  Q
    ||||||||||||| |||||| |  ||||||||| |||| ||| | || |   ||||||||||||||||| ||||||||||||||||  ||||||| ||||    
T  20025201 gtgaggatggatgagaggcactagtggcggaatgtgctttggtacggtgtcaatgagtcttcgcggtgggacgaaaggtgtctgcacacacgttaacact 20025300  T
Q  439 ccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacat 538  Q
    ||||||||   ||||| |||| |  | |||||| ||||||||||||||||||| ||||||||||||   | ||||||||||||| | |||||||||| |     
T  20025301 ccaacgctactgtcaggaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcat--tccttgagggtgaagctaggtcacccttatac 20025398  T
Q  539 aggcgctcgtga 550  Q
    |||||| |||||    
T  20025399 aggcgcgcgtga 20025410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 393 - 544
Target Start/End: Original strand, 25537377 - 25537526
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||   ||||||||  | ||||||  ||||||  |||||||||||    
T  25537377 gagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcactccaacgctcaagattgtaatggaactgagaaagattgtgtatgaagtgttgtga 25537476  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |||||||    || || |||||||||||| ||  ||||||||| ||||||||    
T  25537477 aaagtga--tgtataccttgagggtgaagaaagttcacccttatataggcgc 25537526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 396 - 524
Target Start/End: Original strand, 25333710 - 25333836
Alignment:
Q  396 tcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaa 495  Q
    ||||||||||||| ||||||||   ||||||||  |||| ||||| |||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  25333710 tcttcgcggtggagcgaaaggtacttgcaggcatattagtactccgacgctcaagtcagtaatgtaactaagagagagtgtgtagaaagtgttgttaaaa 25333809  T
Q  496 gtgaatcatacactttgagggtgaagcaa 524  Q
    |||||||||  |||||||| |||||||||    
T  25333810 gtgaatcat--actttgagagtgaagcaa 25333836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 401 - 461
Target Start/End: Complemental strand, 26348190 - 26348130
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26348190 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcattaatgga 26348130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 392 - 461
Target Start/End: Original strand, 24546318 - 24546386
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  24546318 tgagtcttcatggtggaacgaaaggtgtctgcaggcacgttagaactcc-acgctaaagtcagtaatgga 24546386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 32418593 - 32418466
Alignment:
Q  405 tggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcat 504  Q
    |||||||||||| | |||||||||||| | |||||  |||||||||||| | |||||    |||||| ||||||||| ||||||||||| ||||||||||    
T  32418593 tggaacgaaaggagcctgcaggcacgtcaacactctgacgctcaagtcactgatggaacagagaaagagtgtgtagagagtgttgtgaagagtgaatcat 32418494  T
Q  505 acactttgagggtgaagcaaagtcaccctt 534  Q
      || |||||| ||||||||  ||||||||    
T  32418493 --accttgaggatgaagcaagttcaccctt 32418466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 543
Target Start/End: Original strand, 22865735 - 22865881
Alignment:
Q  395 gtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaa 494  Q
    |||||||| |||||||||||||||  |||||| |||||||||||   |||||||||| |||||||||  | |||||  |||||||  || ||||||||||    
T  22865735 gtcttcgcagtggaacgaaaggtgcatgcaggtacgttagcactttgacgctcaagttagtaatggaactgagaaaaagtgtgtaagaaatgttgtgaaa 22865834  T
Q  495 agtgaatcatacactttgagggtgaagcaaagtcacccttacataggcg 543  Q
    |||||    |  || |||||||||||||||  ||||||||| |||||||    
T  22865835 agtga--tgtgtaccttgagggtgaagcaagttcacccttatataggcg 22865881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 390 - 450
Target Start/End: Original strand, 16621177 - 16621237
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaag 450  Q
    ||||||||||| |||||||||||||||||| || |||||||||| |||| |||||||||||    
T  16621177 gatgagtcttcacggtggaacgaaaggtgtatgtaggcacgttaacacttcaacgctcaag 16621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 4477167 - 4477233
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    |||||||||| ||||||| ||||| |||| | ||||||||||||  |||||||||||||||||||||    
T  4477167 gatgagtctttgcggtgggacgaagggtgcccgcaggcacgttaatactccaacgctcaagtcagta 4477233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 535
Target Start/End: Original strand, 34493489 - 34493625
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||| | ||||| || |||||||| ||||||||||||| |  || |    |||||||||||||||| ||  ||||| ||||  |||||||||||    
T  34493489 gatgagtctttgtggtgggactaaaggtgtttgcaggcacgttaacgttcaat---tcaagtcagtaatggaatt--gaaagagtgt--agaaagtgttg 34493581  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    |||||||||||||||  || ||||||||||| | ||||||||||||    
T  34493582 tgaaaagtgaatcat--accttgagggtgaaactaagtcaccctta 34493625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 390 - 451
Target Start/End: Complemental strand, 227800 - 227739
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagt 451  Q
    |||||||||||| ||||| | |||  |||||||||||||||||||||||| |||||||||||    
T  227800 gatgagtcttcgtggtgggatgaagagtgtctgcaggcacgttagcactcaaacgctcaagt 227739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 25829106 - 25829001
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    |||||||||||| |||| ||| |||| | |||||||||||||| ||  |||||| ||||| ||||||| || |||||  |||||||  |||| |||||||    
T  25829106 agtcttcgcggttgaacaaaatgtgtattcaggcacgttagcaatctgacgctctagtcaataatggaattgagaaaaagtgtgtaagaagtattgtgaa 25829007  T
Q  494 aagtga 499  Q
    ||||||    
T  25829006 aagtga 25829001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 461
Target Start/End: Original strand, 18799760 - 18799820
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||||| |  |||||| |||||||||||||| ||| ||||||||||||||||    
T  18799760 gcggtggaacgaaagattcctgcagtcacgttagcactccgacgatcaagtcagtaatgga 18799820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 477
Target Start/End: Original strand, 19846053 - 19846125
Alignment:
Q  405 tggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtg 477  Q
    |||||||||||||| |||||| ||| ||||||||| ||| |||||||||||| ||||  |||||||| |||||    
T  19846053 tggaacgaaaggtgcctgcagacacattagcactctaacactcaagtcagtattggaactaagaaagagtgtg 19846125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 477
Target Start/End: Original strand, 26163619 - 26163691
Alignment:
Q  405 tggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtg 477  Q
    ||||||||||||||  |||| |||| |||||||||||||||||||||||| |||| |  |||||||| |||||    
T  26163619 tggaacgaaaggtgcatgcatgcacattagcactccaacgctcaagtcagaaatgaaactaagaaagagtgtg 26163691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 19993285 - 19993182
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||||||||||| |  ||||||   ||||| ||| |||||| |||||  |||||||||||||||||  | |||||| | |||| ||||||||||||    
T  19993285 tgagtcttcgcggtgggaaaaaaggttcttgcagacacattagcagtccaatactcaagtcagtaatggaactgagaaagagcgtgttgaaagtgttgtg 19993186  T
Q  492 aaaa 495  Q
    ||||    
T  19993185 aaaa 19993182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 461
Target Start/End: Complemental strand, 31202550 - 31202479
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||||||||||  || ||| || |||| ||||||||| ||| ||||||||||||||| ||||    
T  31202550 gatgagtcttcgcggtggaacagaaagtgcctacaggaacgttagcattccgacgctcaagtcagtattgga 31202479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 7449761 - 7449827
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    |||||||||| ||||||| ||||||||||  | ||| ||||||||||||| |||||| |||||||||    
T  7449761 gatgagtctttgcggtgggacgaaaggtgcattcagacacgttagcactctaacgcttaagtcagta 7449827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 18803900 - 18803958
Alignment:
Q  403 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||||| ||| || |||||||||||||||||| | || |||||||||||    
T  18803900 ggtggaacgaaaggtgcctgaagacacgttagcactccaacgattaattcagtaatgga 18803958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 544
Target Start/End: Original strand, 24647302 - 24647409
Alignment:
Q  435 cactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctt 534  Q
    ||||||||||||||| |||||||||||  | | |||| |||||||  ||||||||||||||||||    || || || ||||||||||||  ||||||||    
T  24647302 cactccaacgctcaattcagtaatggaactgaaaaagagtgtgtaagaagtgttgtgaaaagtga--tgtataccttaagggtgaagcaagttcaccctt 24647399  T
Q  535 acataggcgc 544  Q
    | ||||||||    
T  24647400 atataggcgc 24647409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 710
Target Start/End: Complemental strand, 19991023 - 19990871
Alignment:
Q  558 tccaagttttgcagcgtgtgattaggaagcggttagaggacacatgaagggtgatcctaacgtgaaggcgtgcttgaatacggtgcaataaagctggcgt 657  Q
    ||||||||| || ||||||||||||| |||||||||| ||||  || |||||||||||  || | |||  || ||| ||  ||| || ||||| ||| ||    
T  19991023 tccaagtttcgcggcgtgtgattagggagcggttagaagacatgtgtagggtgatcctcgcgcggagggatggttggatgtggtacactaaagttggtgt 19990924  T
Q  658 attccttcagacacgggaccttaaggcggtgcaaatatgggccacgtgtcaac 710  Q
     ||||||||| | |||  |||||||||||||||| | | |||||| |||||||    
T  19990923 gttccttcaggcgcggagccttaaggcggtgcaagtttaggccacatgtcaac 19990871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 454
Target Start/End: Complemental strand, 18884551 - 18884508
Alignment:
Q  411 gaaaggtgtctgcaggcacgttagcactccaacgctcaagtcag 454  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||    
T  18884551 gaaatgtgtctgcaggcacgttagcactccaaagctcaaatcag 18884508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 2e-39; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 390 - 544
Target Start/End: Original strand, 26977709 - 26977861
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    |||||| ||||||||||||| |||    
T  26977709 gatgaatctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtaatggaaccgagaaagagtgtgtagaaagtattg 26977808  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |||||| ||||||||  || |||||||||||||||  | ||||||| ||||||||    
T  26977809 tgaaaaatgaatcat--accttgagggtgaagcaatttgacccttatataggcgc 26977861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 390 - 600
Target Start/End: Original strand, 16030364 - 16030575
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| || || || ||||||||||||||||||  | |  ||| |||||||||||||||||    
T  16030364 gatgagtcttcacggtggaatgaaaggtgtctgcaggcacgttatcagtcaaatgctcaagtcagtaatggaactgaataagagtgtgtagaaagtgttg 16030463  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtgaagata---attccaagttttgcagcgtgtgattaggaag 586  Q
    |||||||||||||||  || ||||||| ||||| ||| |||||||| |||||||| | ||||||||   | |||   |||||  ||||||||||||| ||    
T  16030464 tgaaaagtgaatcat--accttgagggcgaagctaagccacccttatataggcgcacatgaagataactactccggattttgtggcgtgtgattagggag 16030561  T
Q  587 cggttagaggacac 600  Q
    ||||||||| ||||    
T  16030562 cggttagagaacac 16030575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 390 - 541
Target Start/End: Original strand, 16050363 - 16050512
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| | |||||  | |||||| ||||||||||||||| |    
T  16050363 gatgagtcttcgcggtggatagaaaggtatctgcaggcacgttagcactccaacgctcaagtcattgatggaactgagaaagagtgtgtagaaagtgtgg 16050462  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
    ||||||||||| |||  || |||||| |||||||| | |||||||| |||||    
T  16050463 tgaaaagtgaaccat--accttgaggatgaagcaatgccacccttatatagg 16050512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 390 - 599
Target Start/End: Original strand, 5671739 - 5671950
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||| | || |||| | |||||||| || |||||||||||||||||||||||||||| |||||||||  | |||||| |||||||||||||||||    
T  5671739 gatgagtctgcccgctggagcaaaaggtgtttgtaggcacgttagcactccaacgctcaagttagtaatggaactgagaaagagtgtgtagaaagtgttg 5671838  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctc-gtgaagataa----ttccaagttttgcagcgtgtgattagga 584  Q
    ||||||||||||||||||  |||| |||||||  ||||||| |||| |||| ||| |  |||| ||||     ||||||||||||| ||||||||||||     
T  5671839 tgaaaagtgaatcataca--ttgaaggtgaagttaagtcactcttatatagacgcgcattgaaaataaccacgtccaagttttgcatcgtgtgattagg- 5671935  T
Q  585 agcggttagaggaca 599  Q
    |||||| ||||||||    
T  5671936 agcggtaagaggaca 5671950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 328 - 507
Target Start/End: Complemental strand, 5459892 - 5459714
Alignment:
Q  328 tgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggc 427  Q
    |||||| ||| ||||||||||||| ||||| | | ||||||||| |||||||| | || |  |||||||||||| ||||| ||||||||||  ||||||     
T  5459892 tgatctatccggtgaggatggatgagaggcgacgatggcggaatgtgctctggtacggtggcgatgagtcttcgtggtgggacgaaaggtgcatgcaggt 5459793  T
Q  428 acgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcataca 507  Q
    ||||||||||||||||| ||||  |||||| |||  | |||||| ||||||||||||||||||| |||||||||||||||    
T  5459792 acgttagcactccaacgttcaaaacagtaacgga-ctgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcataca 5459714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 393 - 541
Target Start/End: Original strand, 34273059 - 34273205
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||| ||||||| |||||||||  ||||| ||||||||||||||||| |||||||||||||| |||  | |||||| |||||||||||||||||||     
T  34273059 gagtctttgcggtgggacgaaaggtacctgcaagcacgttagcactccaatgctcaagtcagtaacggaactgagaaagagtgtgtagaaagtgttgtgt 34273158  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
    ||||||| ||||  || ||||||||||||||| ||| |||||| |||||    
T  34273159 aaagtgactcat--accttgagggtgaagcaatgtcgcccttatatagg 34273205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 399 - 506
Target Start/End: Original strand, 12177364 - 12177471
Alignment:
Q  399 tcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtg 498  Q
    |||||||||||||||||||| || || ||||||||||||||| || |||||||||||||||||  | |||||| ||||||||||||||||||||||||||    
T  12177364 tcgcggtggaacgaaaggtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtg 12177463  T
Q  499 aatcatac 506  Q
    ||| ||||    
T  12177464 aattatac 12177471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 390 - 505
Target Start/End: Original strand, 22414744 - 22414859
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||||||  |||||||||||||||||| |  | | |||  |||||||||||||||||    
T  22414744 gatgagtctttgcggtggaacgaaaggtgcccgcaggcacgttagcactctgacgctcaagtcagtaatgaaactgaaaaaaagtgtgtagaaagtgttg 22414843  T
Q  490 tgaaaagtgaatcata 505  Q
    ||||||||||||||||    
T  22414844 tgaaaagtgaatcata 22414859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 390 - 500
Target Start/End: Complemental strand, 33101629 - 33101519
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||||| || ||| ||||||||  |||||||||||||||||||||||||||||||| ||||||||  | |||||  |||||||||||||||||    
T  33101629 gatgagtcttcgctgtagaatgaaaggtgcatgcaggcacgttagcactccaacgctcaagtcggtaatggaactgagaaaaagtgtgtagaaagtgttg 33101530  T
Q  490 tgaaaagtgaa 500  Q
    |||||||||||    
T  33101529 tgaaaagtgaa 33101519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 390 - 535
Target Start/End: Complemental strand, 2141066 - 2140927
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||| ||||| |||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||||    | || ||||  ||||||||||||||||    
T  2141066 gatgaatcttcacggtagaacgaaaggtgtatgcaggcaacttagcactccaacgctcaagtcagtaat----tgaaaaaagaatgtgtagaaagtgttg 2140971  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    || |||||||| |||  || ||||||||||||| ||||||||||||    
T  2140970 tggaaagtgaaccat--accttgagggtgaagctaagtcaccctta 2140927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 352 - 535
Target Start/End: Original strand, 18246074 - 18246254
Alignment:
Q  352 ggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagt 451  Q
    |||||||| | |||||||| || |||||| | || |  |||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  18246074 ggaggcaacgatggcggaagatactctggtacggtggtgatgagtcttggcggtggaacgaaaggtgtctgtaagcacgttaacactccaacgctcaagt 18246173  T
Q  452 cagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
     |||| | || || |||||| |||| || |||||| || ||||||||| ||||  || ||||||||||||  ||||||||||||    
T  18246174 gagtattagaattgagaaagagtgtataaaaagtg-tgagaaaagtgattcat--accttgagggtgaagataagtcaccctta 18246254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 524
Target Start/End: Original strand, 52565549 - 52565681
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||| |||| | |||||||||||||| |||||| |||||||||||||  |||||||||||||||| |||  | | |||| ||| | |||||||||||    
T  52565549 gatgagttttcgtgatggaacgaaaggtgcctgcagacacgttagcactctgacgctcaagtcagtaaaggaactgaaaaagagtgcgcagaaagtgttg 52565648  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaa 524  Q
    |||||||||||||||| || |||||||||||||||    
T  52565649 tgaaaagtgaatcata-ac-ttgagggtgaagcaa 52565681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 4601605 - 4601540
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatg 459  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  4601605 agtcttcgcggtggaacgaaaggtgactgcaggcacgttagcactccgacgctcaagtcagtaatg 4601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 1659899 - 1659802
Alignment:
Q  402 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtga 499  Q
    |||||||||||||||||||| ||  ||||||| ||||||||||||||||||| |||||||  | ||||||  ||||||  ||||||||||||||||||    
T  1659899 cggtggaacgaaaggtgtctacatacacgttatcactccaacgctcaagtcaataatggatctgagaaagaatgtgtaagaagtgttgtgaaaagtga 1659802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 491
Target Start/End: Complemental strand, 14255152 - 14255051
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||||||| ||||| |  | |||||| |||||||  ||||||||    
T  14255152 gatgagtcttcgtggtggaacgaagggtgcctgcaagcacgatagcactccaacgctcaagtcattaatgaaactgagaaagagtgtgtaagaagtgttg 14255053  T
Q  490 tg 491  Q
    ||    
T  14255052 tg 14255051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 23728941 - 23728833
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||| |   |||||||||||| |||||||  | |||||| |||||||  ||||||||    
T  23728941 gatgagtcttcgcggtg-aacgaaaggtggatgcaggcacgttagcattatgacgctcaagtcattaatggaaatgagaaagagtgtgtaagaagtgttg 23728843  T
Q  490 tgaaaagtga 499  Q
    ||||||||||    
T  23728842 tgaaaagtga 23728833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 25408066 - 25408174
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    ||||||||  ||||||||| |||||||| |||||| |||||||||||||||| |||||||||||||||| |  | | | || |||||||  |||||||||    
T  25408066 atgagtctctgcggtggaatgaaaggtgcctgcagacacgttagcactccaatgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgt 25408165  T
Q  491 gaaaagtga 499  Q
    |||||||||    
T  25408166 gaaaagtga 25408174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 501
Target Start/End: Complemental strand, 23280367 - 23280273
Alignment:
Q  405 tggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaat 501  Q
    |||||||||||||| |||||| || |||| ||||| ||| |||||||||||||||||  | |||||||||||||  | |||||||||||||||||||    
T  23280367 tggaacgaaaggtgcctgcagacatgttatcactcaaactctcaagtcagtaatggaactgagaaagtgtgtgt--atagtgttgtgaaaagtgaat 23280273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 390 - 507
Target Start/End: Complemental strand, 43344564 - 43344449
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||| ||||||| | |||||||||||||||  |||||||||||| |||||||||||||||| || |  | |||||| ||||||| ||||||  |    
T  43344564 gatgagtctttgcggtgggatgaaaggtgtctgcagaaacgttagcactcgaacgctcaagtcagtattgaaact-agaaagagtgtgtaaaaagtg-gg 43344467  T
Q  490 tgaaaagtgaatcataca 507  Q
     |||||||||||||||||    
T  43344466 ggaaaagtgaatcataca 43344449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 401 - 461
Target Start/End: Complemental strand, 21098956 - 21098896
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||||||| |||||||||| |||||||||| ||| ||||||||||||||||    
T  21098956 gcggtggaacgaaaggtggctgcaggcacattagcactccgacgatcaagtcagtaatgga 21098896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 390 - 461
Target Start/End: Original strand, 48637519 - 48637591
Alignment:
Q  390 gatgagtcttc-gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||| ||||| |||||||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  48637519 gatgagtcttctgcggtagaacgaaaggtgcctgcaggcacgtcagcactctgacgctcaagtcagtaatgga 48637591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 8018918 - 8018984
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    |||||||||||| ||||| ||||||||| ||| |||||||||||||||| | |||||||||||||||    
T  8018918 gatgagtcttcgtggtgggacgaaaggtatctacaggcacgttagcactacgacgctcaagtcagta 8018984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 495
Target Start/End: Complemental strand, 16299695 - 16299591
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||| |||||||||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||| |  | |||||| ||| |||  ||||||||    
T  16299695 gatgagtctt-gcggtggaacgaaacgtgtctgcatgcacattagcactccgacgttcaagtaagtaatgaaactgagaaagagtgcgtaagaagtgttg 16299597  T
Q  490 tgaaaa 495  Q
    ||||||    
T  16299596 tgaaaa 16299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 461
Target Start/End: Complemental strand, 21682712 - 21682641
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||  || ||||||||||||||| ||  ||| ||||| ||||||||||||||||||||||||||||    
T  21682712 gatgagtctctgctgtggaacgaaaggtgcctataggtacgtttgcactccaacgctcaagtcagtaatgga 21682641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 405 - 471
Target Start/End: Original strand, 16522759 - 16522825
Alignment:
Q  405 tggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaag 471  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||| ||| ||| || ||||||    
T  16522759 tggaacgaaaggtgtctgaaggcacgttagcacttcaacgttcaagtcaataaaggaattgagaaag 16522825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 2612782 - 2612714
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||| |||| |||||||||||||||||||| |||||||| | |  |||||||||||||||| ||||    
T  2612782 gagtctttgcggaggaacgaaaggtgtctgcagacacgttagtattgaaacgctcaagtcagtattgga 2612714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 3590811 - 3590867
Alignment:
Q  405 tggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||||  ||||||||| |||||||||| ||| ||||||||||||||||    
T  3590811 tggaacgaaaggtgcatgcaggcaccttagcactccgacgatcaagtcagtaatgga 3590867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 402 - 456
Target Start/End: Original strand, 46016096 - 46016149
Alignment:
Q  402 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||| ||||||    
T  46016096 cggtggaacgaaaggtgt-tgcaggcacgttagcactccgacgatcaaatcagta 46016149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 30732501 - 30732549
Alignment:
Q  405 tggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtca 453  Q
    ||||||| | |||| ||||||||||||||||||||||| ||||||||||    
T  30732501 tggaacggagggtgcctgcaggcacgttagcactccaatgctcaagtca 30732549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 12032298 - 12032223
Alignment:
Q  466 agaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |||||| ||||||||||||||||||| ||| ||||||||| || |||| |||||| | |||||||||||| ||||||||    
T  12032298 agaaagagtgtgtagaaagtgttgtgtaaaatgaatcata-ac-ttga-ggtgaaactaagtcacccttatataggcgc 12032223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 2e-36; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 391 - 544
Target Start/End: Original strand, 19305434 - 19305585
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    |||| |||| |||||||||||||||||  ||  |||||||||||||||  |||||||||||||||||||||  | || ||| ||||||||||||||||||    
T  19305434 atgaatctttgcggtggaacgaaaggttcctagaggcacgttagcacttaaacgctcaagtcagtaatggaactgagtaagagtgtgtagaaagtgttgt 19305533  T
Q  491 gaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||||||||||  || ||||||||||||||| |||||||||| ||||||||    
T  19305534 gaaaagtgaatcat--accttgagggtgaagcaaggtcacccttaaataggcgc 19305585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 328 - 544
Target Start/End: Original strand, 30680899 - 30681113
Alignment:
Q  328 tgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggc 427  Q
    |||| ||||||||||||||||||  ||  ||| | |||||| |  ||||| || | || | ||||||||||||||||||| ||||||||||||||||  |    
T  30680899 tgatatgtccagtgaggatggataagaaacaacggtggcgggaggtgctccggtaaggtggagatgagtcttcgcggtgggacgaaaggtgtctgcaatc 30680998  T
Q  428 acgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagt 527  Q
    |||||||||||||||||||||||||||||||| |  | | |||| | |||||||| || ||||||||||||||||||  || |||||| |||||||| ||    
T  30680999 acgttagcactccaacgctcaagtcagtaatgaaactgataaagagcgtgtagaatgtattgtgaaaagtgaatcat--accttgaggatgaagcaatgt 30681096  T
Q  528 cacccttacataggcgc 544  Q
    |||| ||| ||||||||    
T  30681097 cacctttagataggcgc 30681113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 390 - 541
Target Start/End: Original strand, 18147275 - 18147424
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||| ||||| ||||||||||| ||| ||| |||||| ||||||||||||||||||| |||||||    |||||| |||||||||||||||||    
T  18147275 gatgagtcttctcggtgaaacgaaaggtgcctgtaggaacgttaacactccaacgctcaagtcactaatggaaccgagaaagagtgtgtagaaagtgttg 18147374  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
    |||||||||| |||||| |||| |||||||||||| |||||||||| |||||    
T  18147375 tgaaaagtgactcatac-cttt-agggtgaagcaatgtcacccttatatagg 18147424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 393 - 542
Target Start/End: Original strand, 20148289 - 20148434
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||| |||||||||||||| |||  ||||| ||||||||||||||| ||||||||| ||||||||| || |||||  | ||||||||||||||||||    
T  20148289 gagtctttgcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaa--gagtgtagaaagtgttgtga 20148386  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggc 542  Q
    ||||||||||||  || |||| |||||||||| |||||||||| ||||||    
T  20148387 aaagtgaatcat--accttgatggtgaagcaaggtcacccttatataggc 20148434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 393 - 542
Target Start/End: Complemental strand, 22184539 - 22184394
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||| |||||||||||||| |||  ||||| ||||||||||||||| ||||||||| ||||||||| || |||||  | ||||||||||||||||||    
T  22184539 gagtctttgcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaa--gagtgtagaaagtgttgtga 22184442  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggc 542  Q
    ||||||||||||  || |||| |||||||||| |||||||||| ||||||    
T  22184441 aaagtgaatcat--accttgatggtgaagcaaggtcacccttatataggc 22184394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 412 - 544
Target Start/End: Complemental strand, 34573094 - 34572964
Alignment:
Q  412 aaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacacttt 511  Q
    |||||||||||||| ||| |||  |||||||||||||||| |||||| ||  |||||||  ||||||||||||||| |||||||||||||||||||  ||    
T  34573094 aaaggtgtctgcagacacattaatactccaacgctcaagttagtaatagaactaagaaaaagtgtgtagaaagtgtggtgaaaagtgaatcataca--tt 34572997  T
Q  512 gagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||||||  |||||||||||| ||||||||    
T  34572996 gagggtgaagttaagtcacccttatataggcgc 34572964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 390 - 631
Target Start/End: Complemental strand, 3404984 - 3404741
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||||  ||  |||||| ||||||| |||||| ||| ||||| ||| || ||||||||||||||  | |||||| |||||||||||||||||    
T  3404984 gatgagtcttcgcaatgagacgaaatgtgtctgtaggcacattaacactctaacacttaagtcagtaatggaactgagaaagagtgtgtagaaagtgttg 3404885  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtgaagataa----ttccaagttttgcagcgtgtgattaggaa 585  Q
    |||||| ||||||||  || ||||||||||||  || | ||||||| ||||||||  ||||| ||||     ||   ||||||||||||||||||| | |    
T  3404884 tgaaaaatgaatcat--accttgagggtgaagttaaattacccttatataggcgcgtgtgaaaataaccgtctctgggttttgcagcgtgtgattaagga 3404787  T
Q  586 gcggttagaggacacatgaagggtgatcctaacgtgaaggcgtgct 631  Q
    | ||||||||||||| || || ||||| ||  |||| |||||||||    
T  3404786 gtggttagaggacacgtgtagagtgattctcgcgtggaggcgtgct 3404741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 12449705 - 12449596
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||  ||||||||||||||||||||| | | |||| |||||||  ||||||||    
T  12449705 gatgagtcttcgtggtgggacgaaaggtgtctgtaggcacgttagcactctgacgctcaagtcagtaatggagctgaaaaagagtgtgtaagaagtgttg 12449606  T
Q  490 tgaaaagtga 499  Q
    || |||||||    
T  12449605 tggaaagtga 12449596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 394 - 494
Target Start/End: Original strand, 34187272 - 34187372
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||  | |||||| ||||||| ||||||| |||||    
T  34187272 agtctttgcggtggaacgaaaggtgtctgcagacacgttagcacaccaacactcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgtggtgaa 34187371  T
Q  494 a 494  Q
    |    
T  34187372 a 34187372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 393 - 543
Target Start/End: Complemental strand, 31295654 - 31295506
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||||| | |||||||||||||||||| |  | |||||| |||||||  |||||||||||    
T  31295654 gagtcttcgaggtggaacgaaagttgcctgcaggcatgttagcacttcgacgctcaagtcagtaatgaaactgagaaagagtgtgtatgaagtgttgtga 31295555  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcg 543  Q
    |||||||   ||  || | |||||||||||||  |||||||||||||||||    
T  31295554 aaagtga--tatgtacctcgagggtgaagcaagttcacccttacataggcg 31295506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 393 - 497
Target Start/End: Complemental strand, 19331799 - 19331695
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||||||||||||||||||||  |||||| ||||||| ||||| ||||| ||||||||||||||  |||||||| | || ||||||||||||||     
T  19331799 gagtcttcgcggtggaacgaaaggtgcttgcaggtacgttagtactccgacgcttaagtcagtaatggaactaagaaagagagtatagaaagtgttgtgt 19331700  T
Q  493 aaagt 497  Q
    |||||    
T  19331699 aaagt 19331695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 401 - 544
Target Start/End: Original strand, 33596841 - 33596982
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaa 500  Q
    |||||||||||||||||  |||||||||| ||| ||||| ||||||||| ||||||||| |  |||||||  |||||||||||||||||||||||  |||    
T  33596841 gcggtggaacgaaaggtacctgcaggcacattaacactctaacgctcaactcagtaatgaaactaagaaaaagtgtgtagaaagtgttgtgaaaatggaa 33596940  T
Q  501 tcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||  || |||||| ||||||||  |||| |||| ||||||||    
T  33596941 tcat--accttgaggatgaagcaagttcactcttatataggcgc 33596982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 411 - 502
Target Start/End: Complemental strand, 689958 - 689867
Alignment:
Q  411 gaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatc 502  Q
    ||||||||| |||||| || |||||||| ||| ||||||||||||||||||  | |||||||||||||| ||||||||||||||||||||||    
T  689958 gaaaggtgtttgcaggtacattagcactgcaatgctcaagtcagtaatggaactgagaaagtgtgtgtataaagtgttgtgaaaagtgaatc 689867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 394 - 505
Target Start/End: Original strand, 22572018 - 22572128
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||   ||||||| |||||||||||| || | |||| |||||||||| |||||||| |    
T  22572018 agtcttcgccgtggaacaaaaggtggctgcaggcacgttagcactatgacgctcatgtcagtaatggaattga-aaagagtgtgtagaaggtgttgtgta 22572116  T
Q  494 aagtgaatcata 505  Q
    ||||||||||||    
T  22572117 aagtgaatcata 22572128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 393 - 550
Target Start/End: Complemental strand, 9292138 - 9291984
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    |||||||  ||||||||||||||||| ||||| |||||||||||| | |||||||||||||||| ||||  | |||||  || |||| |||||| || ||    
T  9292138 gagtctttacggtggaacgaaaggtgcctgcaagcacgttagcacgctaacgctcaagtcagtattggaactgagaaatagtatgtaaaaagtg-tggga 9292040  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtga 550  Q
    ||||||||||||  || ||||||||||||| || ||||| ||| |||||||| |||||    
T  9292039 aaagtgaatcat--accttgagggtgaagctaactcacctttatataggcgcacgtga 9291984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 391 - 544
Target Start/End: Original strand, 34064165 - 34064316
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| ||||   ||| |||||||||||||| |  |||||||| |||||||  |||||||||    
T  34064165 atgagtcttcacggtagaacgaaaggtgtgtgcaggcacgttaacactatgacgttcaagtcagtaatgaaactaagaaagagtgtgtaagaagtgttgt 34064264  T
Q  491 gaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |||||||||    |  || |||||||||||||||  ||||||||| ||||||||    
T  34064265 gaaaagtga--tgtgtaccttgagggtgaagcaagttcacccttatataggcgc 34064316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 535
Target Start/End: Complemental strand, 9277419 - 9277280
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||| |||||||||||||||||  |||||| ||||||||||||  |||||||||||||||| ||||  | |||||| || |||| ||||||| | |     
T  9277419 gagtctttgcggtggaacgaaaggttcctgcagacacgttagcactataacgctcaagtcagtattggaactgagaaagagtatgtaaaaagtgtggag- 9277321  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    ||||||||||||  || ||||||||||||| || |||||||||    
T  9277320 aaagtgaatcat--accttgagggtgaagctaactcaccctta 9277280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 390 - 461
Target Start/End: Original strand, 16343548 - 16343619
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||| ||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  16343548 gatgagtcttcgcagtggagcgaagggtgcctgcaggcacgttagcactccaacactcaagtcagtaatgga 16343619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 390 - 461
Target Start/End: Complemental strand, 22497420 - 22497349
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||| ||||||||||||||  ||||| |||||||||||||| ||||||||||||||||||||    
T  22497420 gatgagtcttcgcgatggaacgaaaggtgcttgcagacacgttagcactccgacgctcaagtcagtaatgga 22497349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 392 - 506
Target Start/End: Original strand, 11087473 - 11087587
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||   || || |||||||||||| |  | |||||| || ||||||  ||||||||    
T  11087473 tgagtcttcgcggtggaacgaaagctgtctgcagacacattagcactttgacccttaagtcagtaatgtaactgagaaagagtatgtagattgtgttgtg 11087572  T
Q  492 aaaagtgaatcatac 506  Q
    |||||||||||||||    
T  11087573 aaaagtgaatcatac 11087587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 413 - 541
Target Start/End: Complemental strand, 15480440 - 15480314
Alignment:
Q  413 aaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttg 512  Q
    |||||| ||||| ||| |||| ||||| ||| ||||||||| ||||| |  | |||||  ||||||||||||||||||||||||||||||||  || |||    
T  15480440 aaggtgcctgcaagcaagttatcactcgaactctcaagtcaataatgaaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaatcat--accttg 15480343  T
Q  513 agggtgaagcaaagtcacccttacatagg 541  Q
    || ||||||| |||||||||||| |||||    
T  15480342 agagtgaagctaagtcacccttatatagg 15480314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 430 - 542
Target Start/End: Original strand, 14268440 - 14268551
Alignment:
Q  430 gttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtca 529  Q
    ||||||||||||||||| ||||||||||||||  ||||| |  |||||||||||||||| ||||||||||||||||  | |   ||||||||| ||||||    
T  14268440 gttagcactccaacgctgaagtcagtaatggaactaagacatagtgtgtagaaagtgttttgaaaagtgaatcata-tcgtgaggggtgaagctaagtca 14268538  T
Q  530 cccttacataggc 542  Q
    |||||| ||||||    
T  14268539 cccttatataggc 14268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 505
Target Start/End: Original strand, 14080466 - 14080567
Alignment:
Q  403 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatc 502  Q
    ||||| |||||||||| || ||||||| |||||||||  |||||||||| ||||||| | | | ||||| |||||||| |||||||||||||||||||||    
T  14080466 ggtgggacgaaaggtgcctacaggcacattagcactctgacgctcaagttagtaatgaactga-gaaagagtgtgtagtaagtgttgtgaaaagtgaatc 14080564  T
Q  503 ata 505  Q
    |||    
T  14080565 ata 14080567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 404 - 505
Target Start/End: Complemental strand, 25008498 - 25008398
Alignment:
Q  404 gtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatca 503  Q
    |||| ||||||||||  ||  ||||||||| ||||||||||||||||||||||||||| || |||||| ||||||| |||||| || | |||||||||||    
T  25008498 gtgggacgaaaggtgcatgtcggcacgttaacactccaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaagtg-tgggtaaagtgaatca 25008400  T
Q  504 ta 505  Q
    ||    
T  25008399 ta 25008398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 529
Target Start/End: Complemental strand, 4251133 - 4251029
Alignment:
Q  423 caggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagc 522  Q
    |||||||| || |||||||||| |||||||||||||| |  | |||||| ||||| ||| ||||||||||||||| ||||||  |  |||||||||||||    
T  4251133 caggcacgataacactccaacgttcaagtcagtaatgaaaatgagaaagagtgtggagagagtgttgtgaaaagtaaatcat--atcttgagggtgaagc 4251036  T
Q  523 aaagtca 529  Q
    |||||||    
T  4251035 aaagtca 4251029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 467 - 584
Target Start/End: Complemental strand, 12203683 - 12203568
Alignment:
Q  467 gaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgtgaagataattccaagttt 566  Q
    ||||| || |||||||||||||||||||||||||||||  |||||||||||||||  |||||||||||| | | || |||||| ||||   | | |||||    
T  12203683 gaaagagtatgtagaaagtgttgtgaaaagtgaatcat--actttgagggtgaagttaagtcacccttatacacgcactcgtggagatgtcttcgagttt 12203586  T
Q  567 tgcagcgtgtgattagga 584  Q
    |||||| |||||| ||||    
T  12203585 tgcagcatgtgatcagga 12203568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 403 - 544
Target Start/End: Complemental strand, 27861057 - 27860918
Alignment:
Q  403 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatc 502  Q
    |||||||| ||||||||||||||||| ||||| |||| ||| |||||||||||||||||  | | | || | |||||  ||||||||||||||||||       
T  27861057 ggtggaacaaaaggtgtctgcaggcatgttagtactctaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtga--t 27860960  T
Q  503 atacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
     |  ||||||||||||||||||  ||||||||  ||||||||    
T  27860959 gtgtactttgagggtgaagcaagttcacccttttataggcgc 27860918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 456
Target Start/End: Complemental strand, 15104385 - 15104323
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    |||||||||||||||| ||||||||||||||||||||||| |    |||||||||||||||||||||    
T  15104385 gatgagtcttcgcggtagaacgaaaggtgtctgcaggcacat----actccaacgctcaagtcagta 15104323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 535
Target Start/End: Original strand, 2907878 - 2908017
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||| | ||||||||| ||| || |||| || |||||| ||||| | || ||| || ||    
T  2907878 gagttttcgcggtaaaacgaaaggtgtctgcagtcacgttagcacgctaacgctcaaatcattattggaattgagaaagggtgtgcaaaacgtg-tgcga 2907976  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    || ||||||| |  ||||||| |||||| | ||||||||||||    
T  2907977 aaggtgaatcgt--actttgaaggtgaatctaagtcaccctta 2908017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 392 - 499
Target Start/End: Complemental strand, 19730710 - 19730604
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||||| |||||||  |||| ||  |||||||| |||||||||||||||||||||||| |||||||  | |||||| |||||||  |||||| |||    
T  19730710 tgagtcttcgtggtggaagtaaag-tgcatgcaggcatgttagcactccaacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgtcgtg 19730612  T
Q  492 aaaagtga 499  Q
     |||||||    
T  19730611 taaagtga 19730604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 404 - 498
Target Start/End: Complemental strand, 12424422 - 12424328
Alignment:
Q  404 gtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtg 498  Q
    ||||||||||||||| ||||||||||||||||||| | ||  ||||||||||||||||  | ||| ||   || || ||||||||||||||||||    
T  12424422 gtggaacgaaaggtgcctgcaggcacgttagcactacgacaatcaagtcagtaatggaactgagagagaaagtctaaaaagtgttgtgaaaagtg 12424328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 422 - 499
Target Start/End: Original strand, 9403173 - 9403250
Alignment:
Q  422 gcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtga 499  Q
    ||||||||||||| ||||| |||||||||||| |||||||  | |||||| |||||||  |||||||||| |||||||    
T  9403173 gcaggcacgttagaactccgacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgttgtggaaagtga 9403250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 12488118 - 12488009
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||||  |||||||||| ||||  |||| |||||||||||||| |||||| |||||| |||| ||  ||| | || |||||||   |||||||    
T  12488118 gatgagtcttcgttgtggaacgaagggtgcatgcatgcacgttagcactctaacgctgaagtcaataatagaactaaaatagagtgtgtaagtagtgttg 12488019  T
Q  490 tgaaaagtga 499  Q
    ||||||||||    
T  12488018 tgaaaagtga 12488009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 458
Target Start/End: Original strand, 23768162 - 23768230
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaat 458  Q
    ||||||||||||  |||||||||| ||||| | ||||||  |||||||||||| |||||||||||||||    
T  23768162 gatgagtcttcggcgtggaacgaagggtgtttacaggcatattagcactccaatgctcaagtcagtaat 23768230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 427 - 540
Target Start/End: Complemental strand, 10115770 - 10115659
Alignment:
Q  427 cacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaag 526  Q
    ||||||||| | |||| |||||||||||||||| |  | |||||| | | ||| ||||| ||||||||||||||||||  || | ||||||||||| |||    
T  10115770 cacgttagctccccaatgctcaagtcagtaatgaaactgagaaagagcgagtaaaaagttttgtgaaaagtgaatcat--acctcgagggtgaagctaag 10115673  T
Q  527 tcacccttacatag 540  Q
    ||| ||||| ||||    
T  10115672 tcagccttatatag 10115659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 424 - 543
Target Start/End: Original strand, 17380100 - 17380217
Alignment:
Q  424 aggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagca 523  Q
    ||||| ||||| ||||||| |  |||||||||||| ||  | |||||| ||||| | |||||||||||||||||||||| |  || || ||| ||| |||    
T  17380100 aggcatgttagtactccaatgtccaagtcagtaatagaactgagaaagagtgtgaataaagtgttgtgaaaagtgaatctt--accttcaggttgacgca 17380197  T
Q  524 aagtcacccttacataggcg 543  Q
    | |||||||||| |||||||    
T  17380198 aggtcacccttatataggcg 17380217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 13823487 - 13823428
Alignment:
Q  402 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||||||||   ||| ||  ||||||||||||||| ||||||||||||||||    
T  13823487 cggtggaacgaaaggtgctggcaagctagttagcactccaacgatcaagtcagtaatgga 13823428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 544
Target Start/End: Original strand, 16130993 - 16131089
Alignment:
Q  446 tcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||||||||||||  | | |||| ||||  |||||||||||||||| |||||||||  || ||||||||||| |||  | ||||||| ||||||||    
T  16130993 tcaagtcagtaatggaactgataaagagtgtacagaaagtgttgtgaaacgtgaatcat--accttgagggtgaaacaagtttacccttatataggcgc 16131089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 14184654 - 14184604
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagt 451  Q
    ||||||||||||||||||  ||||||||| |||||||||| ||| ||||||    
T  14184654 gcggtggaacgaaaggtgattgcaggcacattagcactccgacgatcaagt 14184604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 7e-36; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 394 - 542
Target Start/End: Complemental strand, 9801201 - 9801056
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||| ||    |||||| |||||||||||||||||||||    
T  9801201 agtcttcgcagtggaacgaaaggtgcctgcaagcacgttagcactc-aacactcaagtcagtaatagaacagagaaagagtgtgtagaaagtgttgtgaa 9801103  T
Q  494 aagtgaatcatacactttgagggtgaagcaaagtcacccttacataggc 542  Q
    |||||||||||  || ||||||||||||||| |||||||||| ||||||    
T  9801102 aagtgaatcat--accttgagggtgaagcaatgtcacccttatataggc 9801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 393 - 535
Target Start/End: Complemental strand, 2311953 - 2311813
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||| ||||||| |||||||||||||||  |||||||||||||||||||||| |||| || ||| || ||||||  |||||||||||||||||||    
T  2311953 gagtcttcgtggtggaatgaaaggtgtctgcagatacgttagcactccaacgctcaaatcagcaagggatttgagaaagaatgtgtagaaagtgttgtga 2311854  T
Q  493 aaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    || |||||||||  || ||||||||||||||| ||||||||||    
T  2311853 aaggtgaatcat--accttgagggtgaagcaatgtcaccctta 2311813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 424 - 544
Target Start/End: Original strand, 16704405 - 16704523
Alignment:
Q  424 aggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagca 523  Q
    ||||||||| ||| ||||||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||  || ||||||||||||||    
T  16704405 aggcacgttggcattccaacgctgaagtcagtaatggagttgagaaagagagtgtagaaagtgttgtgaaaagtgaatcat--accttgagggtgaagca 16704502  T
Q  524 aagtcacccttacataggcgc 544  Q
    |  ||||||||| ||||||||    
T  16704503 agttcacccttatataggcgc 16704523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 394 - 541
Target Start/End: Complemental strand, 21342405 - 21342260
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    ||||||| |||||| ||||||||| | ||||||||||||| || | ||||||||||||||||||||||  | | |||| |||| ||||||||||||||||    
T  21342405 agtcttcacggtgggacgaaaggtatatgcaggcacgttaacagtacaacgctcaagtcagtaatggaactgataaagagtgtatagaaagtgttgtgaa 21342306  T
Q  494 aagtgaatcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
    ||||||||||||||  |||||||||||| || || ||||||| |||||    
T  21342305 aagtgaatcataca--ttgagggtgaagtaaggttacccttatatagg 21342260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 506
Target Start/End: Complemental strand, 17143869 - 17143755
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    ||||||||| |||||| | |||||||||    ||||||||||||||||| ||||||||||||||||||||  | |||||| |||||||||||||||||||    
T  17143869 tgagtcttcacggtgggatgaaaggtgttcttaggcacgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 17143770  T
Q  492 aaaagtgaatcatac 506  Q
    |||||||||||||||    
T  17143769 aaaagtgaatcatac 17143755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 392 - 530
Target Start/End: Complemental strand, 17485744 - 17485608
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||||||||||||| || |||| | ||||||||| | |||||||    
T  17485744 tgagtcttcgcggtggaacgaaaggtgtctgtgggcacattagcaccccaacgctcaagtcagtaatggaattgagaaggagtgtgtagagaatgttgtg 17485645  T
Q  492 aaaagtgaatcatacactttgagggtgaagcaaagtcac 530  Q
     ||| |||||  |  || |||||||||||||||| ||||    
T  17485644 taaaatgaatagt--accttgagggtgaagcaaaatcac 17485608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 390 - 535
Target Start/End: Complemental strand, 8123036 - 8122894
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||| ||||  || ||||||||| ||||||||||||||||||||||||||||||||||||||| | || | |||   | ||| ||||| ||||    
T  8123036 gatgagtcttcacggtaaaatgaaaggtgtatgcaggcacgttagcactccaacgctcaagtcagtaatgaaattga-aaaaactatgtcgaaagcgttg 8122938  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    |||||||||||||||  || ||||||||||||||| ||||||||||    
T  8122937 tgaaaagtgaatcat--accttgagggtgaagcaatgtcaccctta 8122894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 424 - 553
Target Start/End: Original strand, 30606931 - 30607058
Alignment:
Q  424 aggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagca 523  Q
    ||||| ||||||| |||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||||||||  || || |||||||||||| |    
T  30606931 aggcatgttagcattccaacgctcaagtcagtaatggaattgagaaagagtgagtagaaagtgttgtgaaaagtgaat--tataccttgagggtgaagta 30607028  T
Q  524 aagtcacccttacataggcgctcgtgaaga 553  Q
    | | |||||||| |||||||| ||| ||||    
T  30607029 aggccacccttatataggcgcgcgttaaga 30607058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 392 - 541
Target Start/End: Original strand, 1770796 - 1770944
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||| ||||||||| |||||||||||||| ||| ||||| ||||| |||||||||| |||||||||  | || ||| |||||||||||||||||||    
T  1770796 tgagtctttgcggtggaaggaaaggtgtctgcaagcatgttagtactccgacgctcaagttagtaatggaactgaggaagagtgtgtagaaagtgttgtg 1770895  T
Q  492 aaaagtgaatcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
    ||||||| ||||| | | |||||| ||||||||  || |||||| |||||    
T  1770896 aaaagtg-atcatgcgccttgaggatgaagcaagttcgcccttatatagg 1770944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 28723895 - 28723784
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    |||||||||||||||||||||||| |||     ||||||||| ||| |||||||||||||||| |||||||  |||||||| ||||||||||| ||||||    
T  28723895 atgagtcttcgcggtggaacgaaatgtgctaataggcacgttggcaatccaacgctcaagtcactaatggaactaagaaagagtgtgtagaaaatgttgt 28723796  T
Q  491 gaaaagtgaatc 502  Q
    ||||||||||||    
T  28723795 gaaaagtgaatc 28723784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 390 - 461
Target Start/End: Original strand, 21649382 - 21649453
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||    
T  21649382 gatgagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcaccccaacgatcaagtcagtaatgga 21649453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 392 - 501
Target Start/End: Complemental strand, 431436 - 431327
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||||||||||||| |||||||| || ||| |||||||||||| | |||||||||||| |||||||  | |||||| ||| || ||||||| ||||    
T  431436 tgagtcttcgcggtggaaagaaaggtgcctacagacacgttagcacttcgacgctcaagtcaataatggaactgagaaagagtgcgtggaaagtgctgtg 431337  T
Q  492 aaaagtgaat 501  Q
    ||||||||||    
T  431336 aaaagtgaat 431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 12516158 - 12516263
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaa 493  Q
    |||||||  |||| ||||||||||| |||||| |||||||||||||| |||||||||| |||||||||  | ||||||  ||||||  ||||||||||||    
T  12516158 agtcttcatggtgaaacgaaaggtgcctgcagacacgttagcactccgacgctcaagttagtaatggaactgagaaagattgtgtaataagtgttgtgaa 12516257  T
Q  494 aagtga 499  Q
    ||||||    
T  12516258 aagtga 12516263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 391 - 535
Target Start/End: Complemental strand, 28715604 - 28715467
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    ||||||||||  |||| || ||||| |||| ||| ||||||||||||||||||     |||||||||||||  | |||||| ||||||| ||||||||||    
T  28715604 atgagtcttcaaggtgaaatgaaagttgtccgcatgcacgttagcactccaac-----agtcagtaatggaactgagaaagagtgtgtataaagtgttgt 28715510  T
Q  491 gaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    ||||||||||||||  || ||||||||||| |||  |||||||||    
T  28715509 gaaaagtgaatcat--accttgagggtgaaacaatatcaccctta 28715467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 1475722 - 1475783
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    ||||||| |||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  1475722 agtcttcacggtgggacgaaaggtgtctgcaggcatgctagcactccaacgctcaagtcagt 1475783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 392 - 535
Target Start/End: Original strand, 20622377 - 20622520
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagtta-agaaagtgtgtgtag--aaagtgtt 488  Q
    ||||||||||| ||| ||||||||||  ||||||||| |||| ||||   ||||||||||||||||| ||| || |||||  ||||||||  |||||| |    
T  20622377 tgagtcttcgcagtgaaacgaaaggttcctgcaggcatgttaacactttgacgctcaagtcagtaat-gagatagagaaatagtgtgtagataaagtggt 20622475  T
Q  489 gtgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    ||||||||||||||||  || |||||||||||||||  |||||||||    
T  20622476 gtgaaaagtgaatcat--accttgagggtgaagcaagttcaccctta 20622520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 503
Target Start/End: Complemental strand, 13085189 - 13085082
Alignment:
Q  396 tcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaa 495  Q
    |||||| ||||| | ||||| |||||||||||| || |||| |||||||||||||||| ||||| |  | ||||||  | |||||||||| |||||||||    
T  13085189 tcttcgtggtgggatgaaagatgtctgcaggcatgtaagcattccaacgctcaagtcaataatgaaactgagaaagaatatgtagaaagtattgtgaaaa 13085090  T
Q  496 gtgaatca 503  Q
    ||||||||    
T  13085089 gtgaatca 13085082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 35314236 - 35314178
Alignment:
Q  398 ttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    |||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||    
T  35314236 ttcgcggtggaacggagggtgtttgcagacacgttagcactccaacgctcaagtcagta 35314178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 9007879 - 9007832
Alignment:
Q  409 acgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagta 456  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  9007879 acgaaaggtgcctgcaggcacgttaacactccaacgctcaagtcagta 9007832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 544
Target Start/End: Complemental strand, 14860221 - 14860069
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||| |||||| ||||||||||||||||  ||||||||| |||||||||  |  ||||| |||||||||||  | |||||  || ||||  ||||||||    
T  14860221 gatgaatcttcgtggtggaacgaaaggtgcttgcaggcacattagcactctgattctcaactcagtaatggaactgagaaacagtttgtaagaagtgttg 14860122  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    ||||||||||    |  || |||||||||||||||  ||||||||| ||||||||    
T  14860121 tgaaaagtga--tgtgtaccttgagggtgaagcaagttcacccttatataggcgc 14860069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 12731680 - 12731574
Alignment:
Q  393 gagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtga 492  Q
    ||||||||| ||||||||||| |||| || ||  || ||||| ||||| ||||||| |||| |||||||  | |||||| |||| ||  |||||||||||    
T  12731680 gagtcttcgaggtggaacgaatggtgcctacaaccatgttagtactccgacgctcacgtcattaatggaactgagaaagagtgtataagaagtgttgtga 12731581  T
Q  493 aaagtga 499  Q
    |||||||    
T  12731580 aaagtga 12731574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 506
Target Start/End: Original strand, 13932921 - 13933029
Alignment:
Q  395 gtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaa 494  Q
    ||||||| |||||||||||||||| |||    || || |||| |||||| |||||||||||||| ||  | | ||| |||| || |||| ||||||||||    
T  13932921 gtcttcgtggtggaacgaaaggtgcctga---catgtaagcagtccaacactcaagtcagtaattgaactgataaaatgtgggttgaaaatgttgtgaaa 13933017  T
Q  495 agtgaatcatac 506  Q
    ||||||||||||    
T  13933018 agtgaatcatac 13933029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 390 - 498
Target Start/End: Original strand, 21652612 - 21652719
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||| |||||||||||| ||| ||||| || | ||||||||  ||| |||||||||||||||||  ||||| ||  ||||||  |||||||     
T  21652612 gatgagtcttcgtggtggaacgaaacgtgcctgcaagc-cattagcacttaaactctcaagtcagtaatggaactaagagagaatgtgtaagaagtgtta 21652710  T
Q  490 tgaaaagtg 498  Q
    || ||||||    
T  21652711 tggaaagtg 21652719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 615
Target Start/End: Complemental strand, 28723719 - 28723668
Alignment:
Q  564 ttttgcagcgtgtgattaggaagcggttagaggacacatgaagggtgatcct 615  Q
    ||||||| |||||||| ||| |||| |||||||||||||| |||||||||||    
T  28723719 ttttgcaacgtgtgatcagggagcgattagaggacacatgtagggtgatcct 28723668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 421 - 451
Target Start/End: Original strand, 10896103 - 10896133
Alignment:
Q  421 tgcaggcacgttagcactccaacgctcaagt 451  Q
    |||||||||||||||||||||||||||||||    
T  10896103 tgcaggcacgttagcactccaacgctcaagt 10896133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 451
Target Start/End: Complemental strand, 7743466 - 7743409
Alignment:
Q  394 agtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagt 451  Q
    ||||||| | ||| |||||||||| | |||| |||||||||||||| |||||||||||    
T  7743466 agtcttcacagtgaaacgaaaggtatatgcatgcacgttagcactcgaacgctcaagt 7743409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 499
Target Start/End: Original strand, 12251957 - 12252066
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||||  | | || |||||||  |||||||| ||||||||||  || ||||||||||||| | |  | |||||| |||||||  || |||||    
T  12251957 gatgagtcttcgcaataggacaaaaggtgcatgcaggcatgttagcactctgacactcaagtcagtaacgaaaatgagaaagagtgtgtaagaattgttg 12252056  T
Q  490 tgaaaagtga 499  Q
    ||||||||||    
T  12252057 tgaaaagtga 12252066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 398 - 615
Target Start/End: Complemental strand, 95924 - 95705
Alignment:
Q  398 ttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagt 497  Q
    |||||||||| || ||||||  |||||||||||||| |||| |||||||||||| |||||||||  | |||||| ||| |||||||||||||||||||||    
T  95924 ttcgcggtgggacaaaaggttcctgcaggcacgttaccacttcaacgctcaagttagtaatggaactgagaaagagtgcgtagaaagtgttgtgaaaagt 95825  T
Q  498 gaatcatacactttgagggtgaagcaaagtcacccttacataggcgctcgt---gaaga--taattccaagttttgcagcgtgtgattaggaagcggtta 592  Q
    |||||||  || || |||||||||||| |||||||||| |||||| | |||   ||| |  ||  ||| |||||||| ||||||||||||| | ||||||    
T  95824 gaatcat--accttcagggtgaagcaacgtcacccttatataggcacgcgtttggaatatctacctccgagttttgcggcgtgtgattaggga-cggtta 95728  T
Q  593 gaggacacatgaagggtgatcct 615  Q
    ||||||||||| || ||||||||    
T  95727 gaggacacatgtagagtgatcct 95705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 328 - 505
Target Start/End: Original strand, 7792 - 7969
Alignment:
Q  328 tgatctgtccagtgaggatggatgggaggcaatgttggcggaatatgctctggaagggggaagatgagtcttcgcggtggaacgaaaggtgtctgcaggc 427  Q
    |||||||||||||||||||||||| |||||||   ||||| ||  | ||||   | || |  ||||||||||| |||||||| ||||||||  || ||||    
T  7792 tgatctgtccagtgaggatggatgagaggcaaaagtggcgaaaagtactctattacggtggcgatgagtcttcacggtggaaggaaaggtgcatgtaggc 7891  T
Q  428 acgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcata 505  Q
    |||||||||||| ||||||||| ||||||||| | || |||||| |||||||||||||||||||||||||||||||||    
T  7892 acgttagcactctaacgctcaaatcagtaatgcaattgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcata 7969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 390 - 504
Target Start/End: Complemental strand, 29398 - 29286
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||||||||||||||||||||  || || || |||||||||||||||||||||||||||||| |  |||| ||  | |||||||||||||||    
T  29398 gatgagtcttcgcggtggaacgaaaggtgcatggagtcatgttagcactccaacgctcaagtcagtaatgaaaataaggaa--gagtgtagaaagtgttg 29301  T
Q  490 tgaaaagtgaatcat 504  Q
    |||||||||||||||    
T  29300 tgaaaagtgaatcat 29286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 400 - 541
Target Start/End: Original strand, 13901 - 14040
Alignment:
Q  400 cgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtga 499  Q
    |||||||| ||||||||||  || | ||||||||| ||||||| |||||||||||||||| |  | |||||| |||||||||||||||||||| ||||||    
T  13901 cgcggtgggacgaaaggtgcatgaatgcacgttagtactccaaagctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgagaagtga 14000  T
Q  500 atcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
    |||||  || |||||||||||||||  ||||||||| |||||    
T  14001 atcat--accttgagggtgaagcaagatcacccttatatagg 14040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 404 - 544
Target Start/End: Original strand, 6281 - 6419
Alignment:
Q  404 gtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatca 503  Q
    ||||||| |||||||| |||||||||||||||||| | | ||||||||||||||||||  | |||||  ||||||||||||||||||||||||||| ||     
T  6281 gtggaacaaaaggtgtttgcaggcacgttagcacttcgaagctcaagtcagtaatggaactgagaaatagtgtgtagaaagtgttgtgaaaagtgagtcg 6380  T
Q  504 tacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
    |  || ||||| |||||||||  ||| ||||| ||||||||    
T  6381 t--accttgagcgtgaagcaagttcatccttatataggcgc 6419  T

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Target: scaffold0291 (Bit Score: 56; Significance: 9e-23; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 427 - 541
Target Start/End: Complemental strand, 15515 - 15403
Alignment:
Q  427 cacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaag 526  Q
    |||||||||||||| |||||| |||||||||||||  | |||||| || | |||||||||||||||||||||||||||  || |||||||||||||||      
T  15515 cacgttagcactccgacgctccagtcagtaatggaactgagaaagagtatctagaaagtgttgtgaaaagtgaatcat--accttgagggtgaagcaagt 15418  T
Q  527 tcacccttacatagg 541  Q
    ||||||||| |||||    
T  15417 tcacccttatatagg 15403  T

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Target: scaffold0291; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 392 - 506
Target Start/End: Complemental strand, 8696 - 8583
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||||||| |||||||||  |||||||| ||||| |||||||||||| | |||||||||||||||||| |  | | |||  |||||||||||||||||||    
T  8696 tgagtctttgcggtggaataaaaggtgtttgcag-cacgttagcacttcgacgctcaagtcagtaatgaaactgaaaaacagtgtgtagaaagtgttgtg 8598  T
Q  492 aaaagtgaatcatac 506  Q
    |||||||||||||||    
T  8597 aaaagtgaatcatac 8583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 421 - 542
Target Start/End: Complemental strand, 68891 - 68774
Alignment:
Q  421 tgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaa 520  Q
    ||||| ||||||||||||||||||||||||| |||||||||  | |||||  | || |||||||||||||||||||||||||||  || ||||||| |||    
T  68891 tgcagacacgttagcactccaacgctcaagttagtaatggaactgagaaa--gagtatagaaagtgttgtgaaaagtgaatcat--accttgagggagaa 68796  T
Q  521 gcaaagtcacccttacataggc 542  Q
    |||| |||||||||| ||||||    
T  68795 gcaaggtcacccttatataggc 68774  T

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Target: scaffold0205 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 499
Target Start/End: Complemental strand, 11026 - 10928
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtga 499  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||  | | | || |||||||  ||||||||||||||||||    
T  11026 gcggtggaacaaaaggtgtatgcaggcacgttagcactccaacgctcaagtcaataatggaactgaaagagagtgtgtaagaagtgttgtgaaaagtga 10928  T

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Target: scaffold0205; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 535
Target Start/End: Original strand, 22855 - 22998
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||| |||||||| |||| |||||||||| |||| |||||||||||||||  ||||||||||||||||||||  | |||||  |||||||  ||||||||    
T  22855 gatgggtcttcgcagtgggacgaaaggtgcctgcgggcacgttagcactctgacgctcaagtcagtaatggaactgagaaatcgtgtgtaagaagtgttg 22954  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcaccctta 535  Q
    ||||||||||  | |  || |||||||||||||||  |||||||||    
T  22955 tgaaaagtga--cgtgtaccttgagggtgaagcaagttcaccctta 22998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 499
Target Start/End: Original strand, 379685 - 379794
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||||||||||||||||||||  |  |||||||||||||||   || || ||||||||||||||  | |||||| |||||||  ||||||||    
T  379685 gatgagtcttcgcggtggaacgaaaggtgcatctaggcacgttagcactttgacactgaagtcagtaatggaactgagaaagagtgtgtaagaagtgttg 379784  T
Q  490 tgaaaagtga 499  Q
    ||||||||||    
T  379785 tgaaaagtga 379794  T

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Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 401 - 544
Target Start/End: Complemental strand, 121122 - 120981
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaa 500  Q
    ||||||||| |||||||| ||  |  |||||||| ||||  | ||| ||||||||||||||  | |||||| ||||||| |||||||||||||||||||     
T  121122 gcggtggaatgaaaggtgcctagaaacacgttagtactctgatgcttaagtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtga- 121024  T
Q  501 tcatacactttgagggtgaagcaaagtcacccttacataggcgc 544  Q
       |  || |||||||||||||||| ||||||||| ||||||||    
T  121023 -tgtgtaccttgagggtgaagcaaattcacccttatataggcgc 120981  T

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Target: scaffold0013 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 459
Target Start/End: Complemental strand, 4533 - 4477
Alignment:
Q  403 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatg 459  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  4533 ggtggaacgaaaggtgtctgcaagcacgttagcactccaacgctcaagtcactaatg 4477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 390 - 461
Target Start/End: Complemental strand, 10840 - 10769
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||||| ||||||| |||||||||||| ||||| ||||||||||| ||| ||||||||||||||||    
T  10840 gatgagtcttcgtggtggaatgaaaggtgtctgtaggcatgttagcactccgacgttcaagtcagtaatgga 10769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 407 - 498
Target Start/End: Original strand, 215258 - 215349
Alignment:
Q  407 gaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtg 498  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |  | | | || |||||||  |||||||||||||||||    
T  215258 gaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtg 215349  T

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Target: scaffold0057 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 392 - 506
Target Start/End: Complemental strand, 73922 - 73808
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    |||| ||| |||||||||| |||||||  | |||||| ||||||||||  |||||||| | ||||||||| || | |||| ||| |||||||||||||||    
T  73922 tgagcctttgcggtggaacaaaaggtgcattcaggcatgttagcactctgacgctcaaattagtaatggatttgaaaaagagtgcgtagaaagtgttgtg 73823  T
Q  492 aaaagtgaatcatac 506  Q
    |||||| ||||||||    
T  73822 aaaagtaaatcatac 73808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 392 - 504
Target Start/End: Original strand, 35224 - 35337
Alignment:
Q  392 tgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtg 491  Q
    ||||||||||  ||| ||||||| |||  |||||||||||||||||||  || ||||||||||||| |||  | |||||| |||||| ||||||||||||    
T  35224 tgagtcttcgtagtgcaacgaaatgtgcttgcaggcacgttagcactctgacactcaagtcagtaacggaactgagaaagagtgtgtggaaagtgttgtg 35323  T
Q  492 -aaaagtgaatcat 504  Q
     |||||||||||||    
T  35324 aaaaagtgaatcat 35337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 499
Target Start/End: Original strand, 40762 - 40874
Alignment:
Q  387 gaagatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtg 486  Q
    ||||||||||||  | ||| |||||||||| |  ||||||||||||||||||||||||||||||||||| |||||  | | | || | |||||| |||||    
T  40762 gaagatgagtctctgtggtagaacgaaaggcgcatgcaggcacgttagcactccaacgctcaagtcagtgatggaactgaaagagagagtgtaggaagtg 40861  T
Q  487 ttgtgaaaagtga 499  Q
    || ||||||||||    
T  40862 ttatgaaaagtga 40874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 455
Target Start/End: Complemental strand, 69333 - 69281
Alignment:
Q  403 ggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagt 455  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  69333 ggtggaacaaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagt 69281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 544
Target Start/End: Complemental strand, 326 - 212
Alignment:
Q  429 cgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtgaagcaaagtc 528  Q
    |||||||||||| ||||||||||||||||||||  | |||||| |||||||  ||||||||||||||||| |  ||  || |||||||||||||||  ||    
T  326 cgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtg-agaatgtaccttgagggtgaagcaagttc 228  T
Q  529 acccttacataggcgc 544  Q
    |||||||  |||||||    
T  227 acccttatctaggcgc 212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 391 - 499
Target Start/End: Complemental strand, 20618 - 20510
Alignment:
Q  391 atgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgt 490  Q
    ||||| ||||||||||||||||||||||  | ||  || ||||||||||  |||||||||||| ||| |||  | |||||| ||||||||||| |||| |    
T  20618 atgaggcttcgcggtggaacgaaaggtgcttacaaacatgttagcactctgacgctcaagtcactaaaggaactgagaaagagtgtgtagaaaatgttat 20519  T
Q  491 gaaaagtga 499  Q
    |||||||||    
T  20518 gaaaagtga 20510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 499
Target Start/End: Complemental strand, 10346 - 10246
Alignment:
Q  399 tcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttgtgaaaagtg 498  Q
    ||||| |||||||||||||| ||| |||||| |||||||||||||||| |||| | ||| | || |  |||||  ||| ||||||||| |||||||||||    
T  10346 tcgcgatggaacgaaaggtgcctgtaggcacattagcactccaacgcttaagtgaataaggaagctgcgaaagattgtttagaaagtggtgtgaaaagtg 10247  T
Q  499 a 499  Q
    |    
T  10246 a 10246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 540
Target Start/End: Complemental strand, 21740 - 21592
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||  || ||||||||||  ||| |||| ||||||||||||||||||| |||||||||||| || |  | | | || |||| ||  ||||||||    
T  21740 gatgagtctctgcagtggaacgaagtgtgcctgcgggcacgttagcactccaacactcaagtcagtattgaaactgaaagagagtgtttaagaagtgttg 21641  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacatag 540  Q
    || |||||||    |  || |||||||||||||||| ||||||||||||||    
T  21640 tggaaagtga--tgtgtaccttgagggtgaagcaaattcacccttacatag 21592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 541
Target Start/End: Complemental strand, 18592 - 18444
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    ||||||||||| ||||| ||||||| ||  |||||| ||| ||||||||||||| ||||||||||||  ||   |||||| | ||||||| ||||||| |    
T  18592 gatgagtcttcacggtgaaacgaaatgttcctgcagacactttagcactccaacactcaagtcagtatagggaataagaaggagtgtgtacaaagtgtag 18493  T
Q  490 tgaaaagtgaatcatacactttgagggtgaagcaaagtcacccttacatagg 541  Q
      |||| |||||||||| ||| | || |||||| |||||||||||| |||||    
T  18492 -aaaaaatgaatcatac-cttcg-ggttgaagctaagtcacccttatatagg 18444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 8954 - 9010
Alignment:
Q  404 gtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||||  ||||||||    
T  8954 gtggaacgaa-ggtgcctgcagacacgttagcactccaacgctcaagtatgtaatgga 9010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 6982 - 6873
Alignment:
Q  390 gatgagtcttcgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagttaagaaagtgtgtgtagaaagtgttg 489  Q
    |||||||||||| ||||||||||||| ||   | |||||||||||  |||  ||||||||||||||| || |  | |||| | |||||||  ||||||||    
T  6982 gatgagtcttcgtggtggaacgaaagatgctggtaggcacgttaggtctctgacgctcaagtcagtattgaaactgagaacgagtgtgtaagaagtgttg 6883  T
Q  490 tgaaaagtga 499  Q
    ||||||||||    
T  6882 tgaaaagtga 6873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 461
Target Start/End: Original strand, 42229 - 42289
Alignment:
Q  401 gcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcagtaatgga 461  Q
    |||||| ||||||||||| |||||||||| |||||||| | ||| |||||||| |||||||    
T  42229 gcggtgaaacgaaaggtggctgcaggcacattagcacttcgacgatcaagtcaataatgga 42289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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