View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16475_high_11 (Length: 224)
Name: NF16475_high_11
Description: NF16475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16475_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 7604524 - 7604731
Alignment:
| Q |
1 |
ttcggtctcaatctctctaaacgaattcaccacacaaaactatcagctccagctccattaccggagatgacaaggtcgattgatgaacacctaccatcgg |
100 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
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| T |
7604524 |
ttcggtctcaatctctcaaaacgaattcaccacacaaaactatcagctccagctccattaccggagatgacaaggtcgattgatgaacacctaccgtcag |
7604623 |
T |
|
| Q |
101 |
cgccgatgtgttacgcggtgatacctgatccagacatagtagacaatcctgacattcgaagctatcaaccgtatgtgtacggacggtgtgatcctccggc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
7604624 |
cgccgatgtgttacgcggtgatacctgatccagacatagtagacaatcctgacattcgaagctatcaaccgtatgtgtacggacggtgtgatcctccagc |
7604723 |
T |
|
| Q |
201 |
gttgatac |
208 |
Q |
| |
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|||||||| |
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| T |
7604724 |
gttgatac |
7604731 |
T |
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