View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16476_low_2 (Length: 258)
Name: NF16476_low_2
Description: NF16476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16476_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 42149908 - 42150142
Alignment:
| Q |
19 |
atatctgtatcatgttaattgaatatgtcataaagaagccagtgtgcaagcttgattattattagcagagatacaaattatgataaagccattagccata |
118 |
Q |
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| T |
42149908 |
atatctgtatcatgttaattgaatatgtcataaagaagccagtgtgcaagcttgattattattagcagagatacaaattatgataaagccattagccata |
42150007 |
T |
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| Q |
119 |
gataacaattaagaaggcaaccacagcatatagtaaataaatgacacttgcaacaaacaaactcaaactaaataacaaatacaaccaaggtagtgtatgg |
218 |
Q |
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| T |
42150008 |
gataacaattaagaaggcaaccacagcatatagtaaataaatgacacttgcaacaaacaaactcaaactaaataacaaatacaaccaaggtagtgtatgg |
42150107 |
T |
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| Q |
219 |
catatgaaaagaatggaacttcatacctttgcttc |
253 |
Q |
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| T |
42150108 |
catatgaaaagaatggaacttgatatctttgcttc |
42150142 |
T |
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