View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16477_high_9 (Length: 282)
Name: NF16477_high_9
Description: NF16477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16477_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 22794665 - 22794929
Alignment:
| Q |
1 |
tcgtttataacagcaaccaaccactaagactttgaatttgtattgtgtatagctcgtcagaaagagaaggcaaactcatcagtaaatgagttggtagagg |
100 |
Q |
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| T |
22794665 |
tcgtttataacagcaaccaaccagtaagactttgaatttgtattgtgtatagctcgtcagaaagagaaggcaaactcatcagtaaatgagttggtagagg |
22794764 |
T |
|
| Q |
101 |
cagtaagcagaagaccaaggtcactcagtgaatcagcaaaccgacctccctttataaaagtgccaacaaaaacagtgcatagtagtgatcatgcaacaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
22794765 |
cagtaagcagaagaccaaggtcactcagtgaatcagcaaaccgacctccctttataaaagtgccaacaaaaacagtacatagtagtgatcatgcaacaca |
22794864 |
T |
|
| Q |
201 |
agaacttcaaaaaacaccatccaagtcatcaaggagaagaaaatccgagagtactttgccttcat |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22794865 |
agaacttcaaaaaacaccatccaagtcatcaaggagaagaaaatccgagagtactttgccttcat |
22794929 |
T |
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