View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16478_high_13 (Length: 258)

Name: NF16478_high_13
Description: NF16478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16478_high_13
NF16478_high_13
[»] chr6 (35 HSPs)
chr6 (11-258)||(33041561-33041798)
chr6 (115-230)||(10818343-10818458)
chr6 (115-229)||(9721140-9721254)
chr6 (110-230)||(1390446-1390566)
chr6 (115-229)||(33236079-33236192)
chr6 (116-229)||(9719034-9719147)
chr6 (158-229)||(21606889-21606960)
chr6 (115-229)||(1300748-1300862)
chr6 (116-229)||(5585304-5585418)
chr6 (115-229)||(30487308-30487421)
chr6 (110-229)||(34176463-34176581)
chr6 (115-230)||(14515598-14515713)
chr6 (118-217)||(19278039-19278138)
chr6 (160-229)||(4097559-4097628)
chr6 (165-229)||(10348850-10348914)
chr6 (158-229)||(2900038-2900109)
chr6 (115-230)||(665843-665958)
chr6 (115-227)||(16737998-16738110)
chr6 (162-229)||(31849238-31849305)
chr6 (115-184)||(10818231-10818300)
chr6 (116-185)||(26318477-26318546)
chr6 (158-217)||(9298625-9298685)
chr6 (116-184)||(19278211-19278278)
chr6 (159-230)||(1395763-1395834)
chr6 (159-229)||(30849960-30850028)
chr6 (162-212)||(7775996-7776046)
chr6 (115-184)||(14515475-14515544)
chr6 (159-229)||(2892650-2892719)
chr6 (121-186)||(23091129-23091195)
chr6 (158-207)||(31799070-31799120)
chr6 (160-229)||(2892890-2892959)
chr6 (116-181)||(21607020-21607085)
chr6 (116-184)||(4097686-4097754)
chr6 (186-230)||(13583846-13583890)
chr6 (115-155)||(23090997-23091037)
[»] chr3 (39 HSPs)
chr3 (110-229)||(41110318-41110437)
chr3 (115-229)||(24560345-24560459)
chr3 (110-230)||(18654597-18654717)
chr3 (133-229)||(52474043-52474139)
chr3 (110-229)||(41039947-41040066)
chr3 (116-218)||(28581189-28581291)
chr3 (115-229)||(36568906-36569019)
chr3 (158-228)||(37102194-37102264)
chr3 (164-229)||(9312522-9312587)
chr3 (117-229)||(37807208-37807321)
chr3 (132-225)||(46556277-46556369)
chr3 (134-230)||(25654991-25655087)
chr3 (158-229)||(220442-220513)
chr3 (158-229)||(30200133-30200204)
chr3 (115-229)||(16275707-16275821)
chr3 (158-229)||(21773910-21773981)
chr3 (119-229)||(27541937-27542047)
chr3 (117-230)||(10748299-10748407)
chr3 (115-184)||(34641163-34641232)
chr3 (176-229)||(43005804-43005855)
chr3 (164-229)||(52185144-52185207)
chr3 (116-207)||(17474209-17474301)
chr3 (109-184)||(24253895-24253970)
chr3 (110-202)||(26135952-26136044)
chr3 (170-229)||(2387817-2387876)
chr3 (118-181)||(14897981-14898044)
chr3 (110-184)||(220570-220644)
chr3 (117-207)||(17474356-17474446)
chr3 (134-184)||(28582682-28582732)
chr3 (116-229)||(40463874-40463987)
chr3 (115-184)||(41110494-41110563)
chr3 (164-229)||(55327498-55327563)
chr3 (115-202)||(13082856-13082943)
chr3 (117-184)||(55428552-55428619)
chr3 (115-197)||(23028086-23028168)
chr3 (116-181)||(6803377-6803442)
chr3 (119-184)||(21773788-21773853)
chr3 (115-184)||(24560219-24560288)
chr3 (136-184)||(30200264-30200312)
[»] chr1 (39 HSPs)
chr1 (117-229)||(8529927-8530039)
chr1 (110-229)||(41498532-41498652)
chr1 (115-229)||(40094935-40095049)
chr1 (110-223)||(12234144-12234257)
chr1 (115-229)||(30010460-30010574)
chr1 (110-229)||(38509891-38510010)
chr1 (110-229)||(43551993-43552108)
chr1 (115-229)||(35349468-35349578)
chr1 (115-229)||(2858934-2859048)
chr1 (116-229)||(20576136-20576247)
chr1 (116-229)||(7444623-7444736)
chr1 (161-229)||(32951366-32951434)
chr1 (158-230)||(49946633-49946705)
chr1 (158-229)||(36285619-36285690)
chr1 (109-228)||(28770852-28770969)
chr1 (165-229)||(50744332-50744397)
chr1 (158-229)||(6563704-6563775)
chr1 (109-184)||(32951491-32951566)
chr1 (167-229)||(45585739-45585801)
chr1 (159-229)||(51597796-51597866)
chr1 (158-229)||(40964726-40964798)
chr1 (120-184)||(2859105-2859169)
chr1 (158-229)||(10392000-10392072)
chr1 (110-177)||(23536777-23536844)
chr1 (144-223)||(26940874-26940953)
chr1 (110-184)||(35349635-35349709)
chr1 (158-229)||(41676407-41676480)
chr1 (115-184)||(30010334-30010403)
chr1 (115-180)||(41498406-41498471)
chr1 (110-202)||(2470727-2470819)
chr1 (115-207)||(2506689-2506781)
chr1 (117-180)||(35512974-35513037)
chr1 (134-184)||(10391893-10391943)
chr1 (102-184)||(12233999-12234081)
chr1 (115-164)||(20607410-20607459)
chr1 (111-184)||(25268437-25268510)
chr1 (115-212)||(40709294-40709391)
chr1 (116-184)||(7444481-7444549)
chr1 (116-184)||(38510067-38510135)
[»] scaffold0067 (2 HSPs)
scaffold0067 (109-230)||(39182-39304)
scaffold0067 (115-184)||(39363-39432)
[»] chr7 (44 HSPs)
chr7 (115-229)||(18231714-18231828)
chr7 (119-229)||(4833537-4833647)
chr7 (134-229)||(24970187-24970281)
chr7 (115-230)||(41496959-41497074)
chr7 (115-229)||(47390984-47391098)
chr7 (158-230)||(33655153-33655225)
chr7 (118-229)||(10315761-10315872)
chr7 (115-229)||(40196534-40196648)
chr7 (116-221)||(42306466-42306571)
chr7 (115-228)||(45940658-45940771)
chr7 (159-229)||(34235053-34235123)
chr7 (110-229)||(13770945-13771062)
chr7 (158-229)||(32872826-32872897)
chr7 (115-229)||(13425122-13425236)
chr7 (165-229)||(40572287-40572350)
chr7 (133-229)||(25887320-25887417)
chr7 (116-229)||(43230364-43230476)
chr7 (133-229)||(1051520-1051614)
chr7 (115-201)||(48881560-48881646)
chr7 (115-184)||(39856038-39856107)
chr7 (110-229)||(41008309-41008425)
chr7 (115-195)||(36267555-36267635)
chr7 (170-229)||(22163167-22163225)
chr7 (170-229)||(22221875-22221933)
chr7 (115-184)||(31571643-31571712)
chr7 (160-228)||(19835838-19835906)
chr7 (110-218)||(31553182-31553287)
chr7 (169-229)||(47229888-47229948)
chr7 (115-181)||(33519224-33519290)
chr7 (115-184)||(13771119-13771188)
chr7 (160-258)||(17852962-17853067)
chr7 (115-184)||(28074105-28074174)
chr7 (115-232)||(30592255-30592372)
chr7 (115-184)||(34228492-34228561)
chr7 (160-207)||(2087786-2087833)
chr7 (158-197)||(30891039-30891078)
chr7 (186-229)||(37417706-37417749)
chr7 (115-182)||(37925843-37925910)
chr7 (159-258)||(34228364-34228471)
chr7 (110-180)||(47390852-47390922)
chr7 (116-225)||(26365900-26366009)
chr7 (164-221)||(42087131-42087188)
chr7 (116-180)||(33655285-33655349)
chr7 (157-185)||(34235180-34235208)
[»] chr5 (44 HSPs)
chr5 (110-258)||(10650520-10650661)
chr5 (115-229)||(13634839-13634953)
chr5 (115-215)||(1657955-1658055)
chr5 (110-229)||(7544264-7544383)
chr5 (115-229)||(14245090-14245204)
chr5 (115-227)||(8502837-8502949)
chr5 (118-229)||(36363160-36363271)
chr5 (115-229)||(37607022-37607136)
chr5 (115-229)||(37779231-37779345)
chr5 (115-230)||(16938606-16938721)
chr5 (115-229)||(26415021-26415136)
chr5 (115-230)||(28279478-28279593)
chr5 (116-225)||(9798615-9798724)
chr5 (158-230)||(4373611-4373683)
chr5 (110-229)||(10476156-10476275)
chr5 (158-229)||(36392195-36392266)
chr5 (164-228)||(20146917-20146981)
chr5 (158-229)||(10072692-10072763)
chr5 (115-229)||(37551535-37551647)
chr5 (115-229)||(37654365-37654477)
chr5 (159-229)||(20513491-20513561)
chr5 (158-229)||(43535-43607)
chr5 (165-229)||(9857008-9857072)
chr5 (159-230)||(16501836-16501907)
chr5 (158-229)||(22023495-22023568)
chr5 (158-229)||(32727822-32727893)
chr5 (115-201)||(14245202-14245288)
chr5 (116-190)||(11757070-11757144)
chr5 (159-225)||(17024270-17024336)
chr5 (115-184)||(13634713-13634782)
chr5 (158-218)||(17780279-17780340)
chr5 (115-184)||(26414895-26414964)
chr5 (164-232)||(4423336-4423404)
chr5 (113-201)||(10650427-10650517)
chr5 (115-182)||(34980812-34980879)
chr5 (158-223)||(11419237-11419302)
chr5 (158-206)||(2556167-2556215)
chr5 (117-176)||(2550533-2550592)
chr5 (158-229)||(29002251-29002322)
chr5 (115-177)||(10476028-10476090)
chr5 (110-180)||(33744190-33744260)
chr5 (115-181)||(40815299-40815365)
chr5 (115-184)||(16938481-16938550)
chr5 (158-202)||(2550397-2550441)
[»] chr4 (39 HSPs)
chr4 (115-229)||(45742018-45742132)
chr4 (115-229)||(54935197-54935311)
chr4 (132-229)||(31348340-31348437)
chr4 (110-230)||(5730827-5730947)
chr4 (115-230)||(41174472-41174587)
chr4 (115-229)||(49735470-49735584)
chr4 (115-229)||(54320562-54320676)
chr4 (115-230)||(27735872-27735987)
chr4 (115-229)||(24565348-24565462)
chr4 (115-210)||(6938394-6938489)
chr4 (158-229)||(34110933-34111003)
chr4 (109-198)||(37711282-37711371)
chr4 (170-229)||(16400928-16400987)
chr4 (121-232)||(35248811-35248922)
chr4 (115-184)||(31348494-31348563)
chr4 (121-229)||(17938115-17938223)
chr4 (164-220)||(29798422-29798478)
chr4 (158-230)||(46007744-46007818)
chr4 (158-232)||(36278376-36278450)
chr4 (115-184)||(1968532-1968601)
chr4 (134-229)||(22659317-22659413)
chr4 (133-204)||(21694910-21694981)
chr4 (117-184)||(27735749-27735816)
chr4 (116-179)||(46007879-46007942)
chr4 (108-186)||(2247972-2248050)
chr4 (127-229)||(6891488-6891590)
chr4 (159-229)||(36151704-36151773)
chr4 (176-229)||(26167065-26167118)
chr4 (115-184)||(45132668-45132737)
chr4 (160-201)||(45911327-45911368)
chr4 (115-184)||(54576329-54576398)
chr4 (115-182)||(54935069-54935137)
chr4 (158-221)||(44784128-44784190)
chr4 (115-181)||(47433885-47433951)
chr4 (110-180)||(47846233-47846303)
chr4 (118-200)||(55510326-55510407)
chr4 (164-229)||(2247854-2247919)
chr4 (133-229)||(45132517-45132617)
chr4 (115-203)||(37761467-37761555)
[»] chr2 (39 HSPs)
chr2 (115-229)||(23748223-23748337)
chr2 (115-229)||(36347543-36347657)
chr2 (113-258)||(8426879-8427024)
chr2 (115-230)||(36046206-36046321)
chr2 (152-230)||(15224733-15224811)
chr2 (115-229)||(34209592-34209706)
chr2 (115-229)||(9631688-9631802)
chr2 (137-230)||(36566874-36566968)
chr2 (156-229)||(16565905-16565978)
chr2 (158-229)||(27926681-27926752)
chr2 (158-229)||(39732774-39732845)
chr2 (158-230)||(39821796-39821868)
chr2 (158-229)||(42316809-42316880)
chr2 (115-219)||(40022510-40022615)
chr2 (162-212)||(1583222-1583272)
chr2 (175-229)||(17379940-17379994)
chr2 (158-215)||(7681386-7681443)
chr2 (119-229)||(12541894-12541999)
chr2 (115-184)||(36347714-36347783)
chr2 (115-207)||(35736337-35736429)
chr2 (115-206)||(887261-887351)
chr2 (115-229)||(19566822-19566937)
chr2 (170-229)||(28262500-28262559)
chr2 (109-207)||(45257456-45257555)
chr2 (116-229)||(31795772-31795885)
chr2 (113-181)||(9426985-9427053)
chr2 (115-183)||(15224868-15224936)
chr2 (115-191)||(17380007-17380083)
chr2 (152-229)||(29525768-29525847)
chr2 (115-182)||(34187577-34187644)
chr2 (107-184)||(39732901-39732978)
chr2 (118-177)||(8427051-8427110)
chr2 (109-184)||(22356177-22356252)
chr2 (115-182)||(31061361-31061428)
chr2 (164-229)||(9427113-9427179)
chr2 (110-184)||(35736172-35736246)
chr2 (115-208)||(16713494-16713587)
chr2 (115-184)||(36046375-36046443)
chr2 (109-181)||(41841678-41841750)
[»] chr8 (44 HSPs)
chr8 (115-223)||(34634277-34634385)
chr8 (119-229)||(31543078-31543188)
chr8 (115-229)||(11785654-11785768)
chr8 (121-229)||(11575415-11575522)
chr8 (115-230)||(31738550-31738665)
chr8 (159-229)||(1281271-1281341)
chr8 (119-229)||(36308971-36309081)
chr8 (116-229)||(29690925-29691038)
chr8 (158-229)||(1026894-1026965)
chr8 (109-215)||(3726859-3726965)
chr8 (116-222)||(16653084-16653190)
chr8 (117-230)||(30479721-30479834)
chr8 (164-229)||(9718530-9718595)
chr8 (152-229)||(30664489-30664566)
chr8 (143-223)||(2248586-2248666)
chr8 (158-230)||(37923123-37923195)
chr8 (158-229)||(29358385-29358455)
chr8 (116-229)||(11033545-11033659)
chr8 (115-184)||(43732860-43732929)
chr8 (133-220)||(10028259-10028347)
chr8 (158-229)||(7502999-7503070)
chr8 (157-232)||(7979265-7979340)
chr8 (164-229)||(6315190-6315255)
chr8 (165-229)||(28083870-28083934)
chr8 (158-229)||(4247563-4247633)
chr8 (106-180)||(9718656-9718730)
chr8 (119-184)||(1281149-1281214)
chr8 (116-184)||(16024327-16024394)
chr8 (110-180)||(31543249-31543319)
chr8 (186-220)||(35694828-35694862)
chr8 (175-229)||(37032507-37032561)
chr8 (159-229)||(13405104-13405178)
chr8 (115-229)||(41103506-41103622)
chr8 (115-183)||(2248454-2248522)
chr8 (115-182)||(8815316-8815383)
chr8 (115-230)||(24243052-24243164)
chr8 (160-206)||(5562012-5562058)
chr8 (117-182)||(7394636-7394701)
chr8 (109-202)||(30365126-30365219)
chr8 (115-228)||(40990183-40990299)
chr8 (173-206)||(42919879-42919912)
chr8 (109-185)||(7503126-7503202)
chr8 (117-181)||(11575582-11575646)
chr8 (197-229)||(33922648-33922680)
[»] scaffold0262 (1 HSPs)
scaffold0262 (119-229)||(16302-16412)
[»] scaffold0171 (1 HSPs)
scaffold0171 (134-225)||(16082-16173)
[»] scaffold0198 (1 HSPs)
scaffold0198 (116-201)||(3150-3235)
[»] scaffold0026 (2 HSPs)
scaffold0026 (152-229)||(1300-1377)
scaffold0026 (116-184)||(1175-1243)
[»] scaffold0294 (1 HSPs)
scaffold0294 (112-229)||(15391-15507)
[»] scaffold0341 (1 HSPs)
scaffold0341 (158-229)||(18897-18968)
[»] scaffold0096 (2 HSPs)
scaffold0096 (160-223)||(6717-6780)
scaffold0096 (110-181)||(6581-6652)
[»] scaffold0007 (1 HSPs)
scaffold0007 (117-207)||(242366-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (115-181)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (117-180)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 33041798 - 33041561
Alignment:
Q  11 cacagacattaatattgtgaacttacttggtgttatttagttgtggtgagagtaatgtttcattgtctcatttagtttgagttacttaaaaatggttgtt 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33041798 cacagacattaatattgtgaacttacttggtgttatttagttatggtgagagtaatgtttcattgtctcatttagtttgagttacctaaaaatggttgtt 33041699  T
Q  111 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 210  Q
    |||||||||||||||||||||||||||||||||||||           |||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  33041698 ttatggtgtgtttggatggaaagtttaggaggggaag----------atttattttttatttttaaattacggatactatgaaatgttttttaaaaagtt 33041609  T
Q  211 aacatattaacatgataaataacacctcaatcacacttaatttatttt 258  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33041608 aacatattaacatgataaataacacttcaatcacacttaatttatttt 33041561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 10818458 - 10818343
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| || ||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||    
T  10818458 ggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaaca 10818359  T
Q  215 tattaacatgataaat 230  Q
    ||||||||||||||||    
T  10818358 tattaacatgataaat 10818343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 9721140 - 9721254
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||| |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9721140 ggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaaca 9721239  T
Q  215 tattaacatgataaa 229  Q
    ||||||  |||||||    
T  9721240 tattaatttgataaa 9721254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 1390566 - 1390446
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| |||||||||||||| |  |||||||||||||| ||| | |    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1390566 tttaaggtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaatattttttaaaaagt 1390467  T
Q  210 taacatattaacatgataaat 230  Q
    |||||||||||||||||||||    
T  1390466 taacatattaacatgataaat 1390446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 33236192 - 33236079
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||| |||||||||| |||||| ||| |||| ||| ||||  | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33236192 ggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat-ttttttaaaaagttaaca 33236094  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  33236093 tattaacatgataaa 33236079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 9719034 - 9719147
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||| ||  |||||||||||||||||| ||||   |||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaacat 9719133  T
Q  216 attaacatgataaa 229  Q
    |||||  |||||||    
T  9719134 attaatttgataaa 9719147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 21606889 - 21606960
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  21606889 gtttacttttcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaacatgataaa 21606960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 1300862 - 1300748
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||| | ||  ||| ||| ||||  ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  1300862 ggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatgaaatattttataaaaagttaaca 1300763  T
Q  215 tattaacatgataaa 229  Q
    ||||||| |||||||    
T  1300762 tattaacctgataaa 1300748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 5585304 - 5585418
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttactttt-catttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||||  |||||||||||||||| |||| |  |||||||||| | ||||||||||||| | |||||||||| |||||||||||| |||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaatgttttttaaaaaggtaaca 5585403  T
Q  215 tattaacatgataaa 229  Q
    ||||||||| |||||    
T  5585404 tattaacataataaa 5585418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 30487308 - 30487421
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||| |||||||| ||| | |||||||| | ||||||||||| ||||    
T  30487308 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatgtcttttaaaaagtcaaca 30487406  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  30487407 tattaacatgataaa 30487421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 34176581 - 34176463
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggagggga-agggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    |||||||||||||||||||||  ||||| ||||| | || |||| ||  ||||| ||||||||||||||||||||| |||||||||||||||||  ||||    
T  34176581 tttatggtgtgtttggatggagggtttatgagggaagagagatgaga--gtttagttttcatttttaaattacggacactatgaaatattttttttaaag 34176484  T
Q  209 ttaacatattaacatgataaa 229  Q
    ||||||||||||||| |||||    
T  34176483 ttaacatattaacataataaa 34176463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 14515713 - 14515598
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||| | ||||  |||||  |||||||||||||||| | | ||||| ||||||||||| || ||||||||    
T  14515713 ggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaatattttttgaagagttaaca 14515614  T
Q  215 tattaacatgataaat 230  Q
    ||| ||||||||||||    
T  14515613 tatgaacatgataaat 14515598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 19278039 - 19278138
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 217  Q
    |||||||||||||  |||||||||||||||| | | ||  |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatattttttaaaaagttgacatat 19278138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 4097559 - 4097628
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  4097559 ttacttttaatttttaaattacggacactttgaaatgttttttaaaaagttaacatattaacatgataaa 4097628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 10348850 - 10348914
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||    
T  10348850 tttcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaatacgataaa 10348914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 2900109 - 2900038
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||| ||||||||||||||||||||||||    
T  2900109 gtttacttttcatttttaaattatagacactatgaaatgttttataagaagttaacatattaacatgataaa 2900038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 665843 - 665958
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa-gttaac 213  Q
    |||||||||||||| |  ||||||||||||||| || ||||  ||| | ||||||||||||||||| | ||| |||||||| | |||||||||  |||||    
T  665843 ggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtcttttaaaaattttaac 665941  T
Q  214 atattaacatgataaat 230  Q
    |||||||||||||||||    
T  665942 atattaacatgataaat 665958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 16737998 - 16738110
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||| ||||| || |||||  |||||||||| ||||||||||| ||| |||||||||| |||||| | || |||| |    
T  16737998 ggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatgttttttgataaattaaaa 16738097  T
Q  215 tattaacatgata 227  Q
    || ||||||||||    
T  16738098 taataacatgata 16738110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 31849305 - 31849238
Alignment:
Q  162 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||| |||||||    
T  31849305 acttttcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaacgtgataaa 31849238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 10818231 - 10818300
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  10818231 ggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacgga 10818300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 26318546 - 26318477
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 185  Q
    ||||||||||||||| |||||||||||| |||||| |||||  |||||||||| ||||||||||| ||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggat 26318477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 9298685 - 9298625
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatat 217  Q
    |||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||||||    
T  9298685 gtttacttttcaattttaaattacggacattatgaaatgtttttttaaaaagttaacatat 9298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 19278278 - 19278211
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||| ||||| |||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacgga 19278211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 1395834 - 1395763
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    |||||||||||||||||||||||  | ||| |  ||| ||||||||||| ||||||||||| ||||||||||    
T  1395834 tttacttttcatttttaaattactaacactgtagaatgttttttaaaaaattaacatattagcatgataaat 1395763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 30849960 - 30850028
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||| |||| ||||||||||||| ||||||| |||||||||||||||  |||| ||| ||||||||||||    
T  30849960 tttacatttcgtttttaaattacgcatactataaaatattttttaaaa--ttaaaataataacatgataaa 30850028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 7775996 - 7776046
Alignment:
Q  162 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 212  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||||||||    
T  7775996 acttttcattttaaaattacgaacactataaaatattttttaaaaagttaa 7776046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 14515475 - 14515544
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  14515475 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 14515544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 2892650 - 2892719
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||  || |||||||||| | ||||||| |||||||||||||| |||| ||| ||||||||||||    
T  2892650 tttactttttgttgttaaattacgcacactatgagatattttttaaaaa-ttaaaataataacatgataaa 2892719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23091195 - 23091129
Alignment:
Q  121 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttc-atttttaaattacggata 186  Q
    ||||||||||  |||||||||||||||||| ||||  | |||||||||  |||||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggata 23091129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 31799120 - 31799070
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 207  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  31799120 gtttacttttcttttttaaattacggatattataaaataattttttaaaaa 31799070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 2892890 - 2892959
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||  ||||||||||||| | ||||||||||||||| ||| ||  ||| ||| ||||||||||||    
T  2892890 ttactttttgtttttaaattacgcacactatgaaatattttgtaagaaagtaaaataataacatgataaa 2892959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 21607085 - 21607020
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||||||||||| ||  ||||||||||||||| ||   |||||||||| |||| ||||||||||||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattac 21607020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 4097754 - 4097686
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||| ||  ||||| |||||||||||| || |  ||| ||||||| |||||||||||||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacgga 4097686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 13583890 - 13583846
Alignment:
Q  186 actatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  13583890 actatgaaatgttttttaaaaaattaacatgttaacataataaat 13583846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 23090997 - 23091037
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatggga 155  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    
T  23090997 ggtgtgtttggattgaaggtttaggaggggaagggagggga 23091037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 41110318 - 41110437
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||||||||||||||||||||   ||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41110318 tttatggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaatattttataaaaagt 41110417  T
Q  210 taacatattaacatgataaa 229  Q
    ||||||||||||||||||||    
T  41110418 taacatattaacatgataaa 41110437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 24560459 - 24560345
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||| ||||||||  |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24560459 ggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaaca 24560360  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  24560359 tattaacatgataaa 24560345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 18654597 - 18654717
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  18654597 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 18654696  T
Q  210 taacatattaacatgataaat 230  Q
    |||||||||||||||||||||    
T  18654697 taacatattaacatgataaat 18654717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 52474139 - 52474043
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||  |||  |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  52474139 gtttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaatattttgtaaaaagttaacatattaatatgataaa 52474043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 41039947 - 41040066
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||| ||||||||||||||| ||  | |   |||| |||||| ||||||||||| || ||||||||||||||| ||||||||    
T  41039947 tttagggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatattttataaaaagt 41040046  T
Q  210 taacatattaacatgataaa 229  Q
    ||||||||||||||||||||    
T  41040047 taacatattaacatgataaa 41040066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 28581189 - 28581291
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||||||  |||||| || |||||||| ||||  ||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattacagatattgtgaaatattttttaaaaagttaacat 28581288  T
Q  216 att 218  Q
    |||    
T  28581289 att 28581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 36568906 - 36569019
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  ||||| |||||||||||||||| || | |||||||||| ||||| ||||||||||||    
T  36568906 ggtgtgtttggatggagggtttaggagtggaatggaggggagagttta-ttttcatttttaaatttcgaacactatgaaatgtttttcaaaaagttaaca 36569004  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  36569005 tattaacatgataaa 36569019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 37102194 - 37102264
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa 228  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  37102194 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacataataa 37102264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 9312522 - 9312587
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  9312522 ttttcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaacatgataaa 9312587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 37807321 - 37807208
Alignment:
Q  117 tgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||| |||||  |||||||||||| ||| || |  |||||||||||||| ||||||||||  ||| |||||||||| |||||||||||||||| ||    
T  37807321 tgtgtttgaatggagggtttaggagggggaagagaggacaatgtttacttttcgtttttaaattttggacactatgaaatgttttttaaaaagttaatat 37807222  T
Q  216 attaacatgataaa 229  Q
    ||||||||||||||    
T  37807221 attaacatgataaa 37807208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 46556369 - 46556277
Alignment:
Q  132 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatga 225  Q
    |||||||||| |||| ||| ||||  ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  46556369 agtttaggagaggaatggaggggag-gtttacttttcatttttcaattacggacactatgacatattttttaaaaagttaagatattaacatga 46556277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 25654991 - 25655087
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||||| | |||| ||||| |||||| || |||||||||||||| |||||||||    
T  25654991 tttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaatgttttttgaagagttaacatattaatatgataaat 25655087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 220442 - 220513
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||    
T  220442 gtttagttttcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaacataataaa 220513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 30200133 - 30200204
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  30200133 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaacataataaa 30200204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 16275707 - 16275821
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||  |||| |||||| ||||  ||| ||| |||||||||||||| |||| | |||||||| |||| ||||||||||||     
T  16275707 ggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgttttataaaaagttaact 16275806  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  16275807 tattaacatgataaa 16275821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 21773981 - 21773910
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||| |||||||||||||| | |||| ||||| |||||||||||||||||||||| ||||||||||    
T  21773981 gtttactttttatttttaaattacgaacactaggaaatgttttttaaaaagttaacatatttacatgataaa 21773910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 27541937 - 27542047
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||| ||  |||||||||||||||||| | ||  ||| || ||||||||||||||||  || ||||||||||| || |||||||  |||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaatacttgttaaaaatctaacatatt 27542036  T
Q  219 aacatgataaa 229  Q
    |||||||||||    
T  27542037 aacatgataaa 27542047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 10748299 - 10748407
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 216  Q
    ||||||||||||||  ||||||||||||||||||   ||  ||||||     |||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggagaagagagtttac-----atttttaaattacgggcattataaaatgttttttaaaaagttaacata 10748393  T
Q  217 ttaacatgataaat 230  Q
    ||||||||||||||    
T  10748394 ttaacatgataaat 10748407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 34641232 - 34641163
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| |||||||||||||||    
T  34641232 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacgga 34641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 43005804 - 43005855
Alignment:
Q  176 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  43005804 aattacggat--tatgaaatattttttaaaaagttaacatattaatatgataaa 43005855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 52185207 - 52185144
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||| |||||||||||| ||| ||||  ||||||||| ||||||||||||||||||||||||||||    
T  52185207 tttttatttttaaattatggacacta--aaatattttataaaaagttaacatattaacatgataaa 52185144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 17474209 - 17474301
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 207  Q
    |||||||||||| ||  ||||||||||| |||  |||| || ||||||||||| ||||||||||||||| | ||| |||| ||||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaa 17474301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 24253970 - 24253895
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatg-tttacttttcatttttaaattacgga 184  Q
    ||||| ||||||||||||||||  |||||| ||||||||||| ||||| | |||||||||| |||||||||||||||    
T  24253970 ttttagggtgtgtttggatggagggtttagaaggggaaggga-gggaaggatttacttttcttttttaaattacgga 24253895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 26136044 - 26135952
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    |||| |||||| ||| |||||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||||| | ||| ||||| |||||    
T  26136044 tttaaggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttt 26135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 2387817 - 2387876
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||| ||| ||||||||||||    
T  2387817 tttttaaattacggacactatggaatgttttttaataagttaaaataataacatgataaa 2387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 14897981 - 14898044
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||||||||| || |||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 220644 - 220570
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||| ||| ||||||||||||  |||||||||| ||||||| ||||   |||||||||| |||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacgga 220570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 17474446 - 17474356
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||||||||| ||  ||| |||||||||||||| ||||  ||| ||||||  ||||||||||||| ||| | | ||||||||||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaa 17474356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 28582732 - 28582682
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  28582732 tttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 28582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 40463874 - 40463987
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| |  ||||| ||||  ||  |||| || ||| |||||||||||||||||||||||| ||||| || | ||||||||||  |||| |     
T  40463874 gtgtgtttggatgaagggtttatgaggataaacgatgagagtgtgtacttttcatttttaaattacggacactataaattgttttttaaaatattaaaac 40463973  T
Q  216 attaacatgataaa 229  Q
    | ||||||||||||    
T  40463974 aataacatgataaa 40463987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 41110563 - 41110494
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  ||||  ||||||||||||  |||| ||||||||||| |||||||||||||||    
T  41110563 ggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacgga 41110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 55327563 - 55327498
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||| ||||||||| ||||| | |||||||| ||||||||||||||| | ||||||||| |||||    
T  55327563 ttttcgtttttaaatcacggacattatgaaatgttttttaaaaagttagcgtattaacataataaa 55327498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 13082856 - 13082943
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    ||||||||||||||||  |||||| || | ||| ||  |||| ||||| |||| ||||||||| |||||| |||||||||| ||||||    
T  13082856 ggtgtgtttggatggagggtttagaagagaaagagagaggaaggtttaatttttatttttaaaatacggacactatgaaatgtttttt 13082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 55428619 - 55428552
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacgga 55428552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 23028168 - 23028086
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat 197  Q
    ||||||||||||||||  |||| |||||||||  || || |    |||||||| |||||||||||||||| ||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaatat 23028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 6803442 - 6803377
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||||||||||| ||| ||||||||||||||| || | ||  ||||| ||||| ||||||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattac 6803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 21773788 - 21773853
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||| ||| |||||||||||||||||| || |  || |||||||| ||| |||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacgga 21773853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 24560219 - 24560288
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  24560219 ggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 24560288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 30200312 - 30200264
Alignment:
Q  136 taggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||| || |  ||||||||||| |||||||||||||||    
T  30200312 taggaggggaagggagggaagggtttacttttcttttttaaattacgga 30200264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 8530039 - 8529927
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 216  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatattttttaaaaagttaacata 8529940  T
Q  217 ttaacatgataaa 229  Q
    |||||||| ||||    
T  8529939 ttaacatggtaaa 8529927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 41498652 - 41498532
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||||   |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  41498652 tttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaaag 41498553  T
Q  209 ttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||    
T  41498552 ttaacatattaacatgataaa 41498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 40094935 - 40095049
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||| | ||||  ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  40094935 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaaca 40095034  T
Q  215 tattaacatgataaa 229  Q
     ||||||||||||||    
T  40095035 aattaacatgataaa 40095049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 12234257 - 12234144
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||| ||||||| |||||    
T  12234257 tttatggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatgttttttataaagt 12234158  T
Q  210 taacatattaacat 223  Q
    || |||||||||||    
T  12234157 tagcatattaacat 12234144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 30010574 - 30010460
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  |||||||||||||||| |||||||||| |||| ||||| ||||||||| ||||||||    
T  30010574 ggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaaca 30010475  T
Q  215 tattaacatgataaa 229  Q
    ||||||||| |||||    
T  30010474 tattaacattataaa 30010460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 38509891 - 38510010
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||| ||  ||||||||||||||||||  |||  ||| ||||||||||||||||||||||| |||||||||| | ||||||||| |    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtcttttaaaaaat 38509990  T
Q  210 taacatattaacatgataaa 229  Q
    |||||| |||||| ||||||    
T  38509991 taacatcttaacacgataaa 38510010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 43551993 - 43552108
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||| ||||||| || ||| ||||| ||  ||||| |||||||||||||||||||     |||||||| |||||||||||||    
T  43551993 tttagggtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaattacgt----tatgaaatgttttttaaaaagt 43552088  T
Q  210 taacatattaacatgataaa 229  Q
    ||||||||||||||||||||    
T  43552089 taacatattaacatgataaa 43552108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 35349468 - 35349578
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||||| |||  ||||  ||||||||||||||||||||||||||| |||  ||||| |||| |||||||||||||    
T  35349468 ggtgtgtttggatggagggtttaagaggggagggg--gggagggtttacttttcatttttaaattacggacact--gaaatgttttataaaaagttaaca 35349563  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  35349564 tattaacatgataaa 35349578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 2858934 - 2859048
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||  ||||||||| || |||||||||||||||    
T  2858934 ggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgttatttaaaaagttaaca 2859033  T
Q  215 tattaacatgataaa 229  Q
    || | |||| |||||    
T  2859034 tacttacattataaa 2859048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 20576136 - 20576247
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||| ||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||  |||||| ||||||||| |||||| ||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggacac--tgaaatgttttttaaagagttaatat 20576233  T
Q  216 attaacatgataaa 229  Q
    ||||||||||||||    
T  20576234 attaacatgataaa 20576247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 7444736 - 7444623
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| | ||||||| | |||||| || ||||  ||||| |||||||||| |||||||||| ||||| ||||  ||||||||||||||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgatttttaaaaagttaacat 7444637  T
Q  216 attaacatgataaa 229  Q
    |||||||| |||||    
T  7444636 attaacataataaa 7444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 32951366 - 32951434
Alignment:
Q  161 tacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||    
T  32951366 tacttttcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaacatgataaa 32951434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 49946633 - 49946705
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||    
T  49946633 gtttatttgtcatttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaat 49946705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 36285619 - 36285690
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||| || |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||    
T  36285619 gtttatttatcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaa 36285690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 28770969 - 28770852
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    ||||| ||||||||||||||||| ||||||||||| || |||  |||  ||||| |||| |||||||||||||  | | |||||||| |||| ||||||     
T  28770969 ttttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac--acattatgaaatgttttataaaaaa 28770872  T
Q  209 ttaacatattaacatgataa 228  Q
    ||||||||||||||||||||    
T  28770871 ttaacatattaacatgataa 28770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 50744332 - 50744397
Alignment:
Q  165 tttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||||    
T  50744332 tttcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaacatgataaa 50744397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 6563775 - 6563704
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||||||||||    
T  6563775 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaa 6563704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 32951566 - 32951491
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||| ||||||||||||| || |||||||||| |||||||| ||||  ||||||||||| |||||||||||||||    
T  32951566 ttttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacgga 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 45585739 - 45585801
Alignment:
Q  167 tcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||  |||||||| |||| |||||| ||||||||||||||||||||||||||    
T  45585739 tcatttttaaattatagatactataaaatgtttttttaaaagttaacatattaacatgataaa 45585801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 51597866 - 51597796
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||| |||||||||| | | ||||||||||  ||||||||||||||||||||||| ||||||||    
T  51597866 tttacttttcaattttaaattatgaacactatgaaatggtttttaaaaagttaacatattaagatgataaa 51597796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 40964798 - 40964726
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||||||| ||  | ||||||| |||| |||||||||||||||||| |||||||    
T  40964798 gtttacttttcatttttaaattacggacaccgtcaaatattttttttaaaagttaacatattaacgtgataaa 40964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 2859169 - 2859105
Alignment:
Q  120 gtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||| ||| |||||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacgga 2859105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 10392072 - 10392000
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||| ||||||||||||  | | ||| ||||  |||||||||||||||||||||||||||||||||    
T  10392072 gtttacttttcgtttttaaattacaaacattattaaatgtttttttaaaaagttaacatattaacatgataaa 10392000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 23536777 - 23536844
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 177  Q
    |||||||||||||||||||||   ||||||||| |||||||||||| |||||| |||||  |||||||    
T  23536777 tttatggtgtgtttggatggaggatttaggaggagaagggatgggagtgtttaattttctattttaaa 23536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 26940874 - 26940953
Alignment:
Q  144 gaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 223  Q
    |||| |||||||  ||| |||||| ||||||||||||  || |||||||||||||| || |||||||||| |||||||||    
T  26940874 gaagagatgggagggttcactttttatttttaaattatagacactatgaaatatttgtttaaaagttaacttattaacat 26940953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 35349709 - 35349635
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||| |||||||||||||  |  ||||| |||||||||||| ||||  ||||||||||| |||||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacgga 35349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 41676480 - 41676407
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaa--aagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||     || |||||||||||||||||||||    
T  41676480 gtttacttttcatttttaaattacggacactataaaatgtttttttttttaaattaacatattaacatgataaa 41676407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 30010334 - 30010403
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  30010334 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacgga 30010403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 41498406 - 41498471
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||    
T  41498406 ggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 2470727 - 2470819
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    |||| ||||||||||||||||  ||||||||||||||| ||  |||  ||||  ||| ||||||||||||||| | ||||| |||| ||||||    
T  2470727 tttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgtttttt 2470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 2506781 - 2506689
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    |||||||||||||||| ||||||| || |||||||| | ||    ||| ||||| |||||||||||| |||| ||| ||||| ||||||||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaa 2506689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    ||||||||||||||  |||||||||||||||||| ||||  | ||||||||  |||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 10391893 - 10391943
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||||  || ||||  |||||||||||||||||||||||||||    
T  10391893 tttaggaggggaaacgaggggagggtttacttttcatttttaaattacgga 10391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 12233999 - 12234081
Alignment:
Q  102 atggttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||| ||| | ||||||||||||| ||  |||||||||||||||||| || |  | ||| ||||| |||||||||||||||    
T  12233999 atggttttttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacgga 12234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 20607459 - 20607410
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttact 164  Q
    ||||||||||||||||  |||||||||||||||||| ||||  |||||||    
T  20607459 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 25268510 - 25268437
Alignment:
Q  111 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||| | ||||||||||  |||||| |||||||| || ||||  ||||||||| | |||||||||||||||    
T  25268510 ttatggtatatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 40709294 - 40709391
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 212  Q
    |||||||||||||  || ||||| ||||||||||||  |||    ||||||||| ||||||||||||| ||| ||| ||||| |||||| ||| ||||    
T  40709294 ggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaa 40709391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 7444481 - 7444549
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||| |||| ||  |||| ||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacgga 7444549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 38510135 - 38510067
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||  |  |||||||||||||||||| ||||  ||||| ||||| |||||||| ||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacgga 38510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 39182 - 39304
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||| ||||||||||||||||  ||||||||||||||  ||  ||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39182 ttttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaa 39281  T
Q  208 gttaacatattaacatgataaat 230  Q
    |||||||||||||||||||||||    
T  39282 gttaacatattaacatgataaat 39304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 39432 - 39363
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||| |||| |||||| ||||  ||||||||||| |||||||||||||||    
T  39432 ggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacgga 39363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 18231828 - 18231714
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||   |||||||||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  18231828 ggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaaca 18231729  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  18231728 tattaacatgataaa 18231714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 4833537 - 4833647
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||    
T  4833537 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacctatt 4833636  T
Q  219 aacatgataaa 229  Q
    |||||||||||    
T  4833637 aacatgataaa 4833647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 24970187 - 24970281
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24970187 tttaggaggggaagg-aggggatgatttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacttgataaa 24970281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 41496959 - 41497074
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||   ||||||||| |||||||||||||||| | || ||||| ||||||||||| ||||||    
T  41496959 ggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttttaaaaatttaaca 41497058  T
Q  215 tattaacatgataaat 230  Q
    ||||||||||||||||    
T  41497059 tattaacatgataaat 41497074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 47391098 - 47390984
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| |||||||||||| ||||  ||||  ||||||||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  47391098 ggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaacattttttaaaatgttaaca 47390999  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  47390998 tattaacatgataaa 47390984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 33655153 - 33655225
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  33655153 gtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaat 33655225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 10315872 - 10315761
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 217  Q
    |||||||||||||| ||||||||||||||||||  ||    |||| |||||||||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  10315872 gtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatat 10315773  T
Q  218 taacatgataaa 229  Q
    ||||| ||||||    
T  10315772 taacaagataaa 10315761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 40196534 - 40196648
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||| |||||||||||||  |||  ||||||||||||||||| ||||||||| ||||| |||| |||| |||||||||||||    
T  40196534 ggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagttaaca 40196633  T
Q  215 tattaacatgataaa 229  Q
    ||| ||| |||||||    
T  40196634 tatcaacctgataaa 40196648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 42306571 - 42306466
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||| ||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttttaaaaagttagcat 42306472  T
Q  216 attaac 221  Q
    ||||||    
T  42306471 attaac 42306466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 45940658 - 45940771
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||| |||||| ||||||||||| || || |||||||||| ||||||| |||||||| |||||||||| ||||||| |||| ||  |    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttttacaaagatagta 45940757  T
Q  215 tattaacatgataa 228  Q
    ||||||||| ||||    
T  45940758 tattaacataataa 45940771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 34235053 - 34235123
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||    
T  34235053 tttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaatatgataaa 34235123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 13770945 - 13771062
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||| ||   ||||||||||||||||| ||||   ||||||| | |||||||||||||||| ||||| |||||  || ||||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaata--ttataaaaagt 13771042  T
Q  210 taacatattaacatgataaa 229  Q
    ||||||||||||||||||||    
T  13771043 taacatattaacatgataaa 13771062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 32872826 - 32872897
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  32872826 gtttacttttcttttttaaattacgaatattataaaatactttttaaaaagttaacatattaacatgataaa 32872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 13425122 - 13425236
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||| |  |||  ||||| |||| ||||||||||||| || ||||  ||||||||||| |||||| ||||    
T  13425122 ggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaatattttttcaaaagtcaaca 13425221  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  13425222 tattaacatgataaa 13425236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 40572287 - 40572350
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  40572287 tttcatttttaaattacggatgctataaaatatttttt-aaaagttaacatattaacatgataaa 40572350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 25887417 - 25887320
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||||| | |  |||||||  |||||| ||||||||||||||||| ||||||||    
T  25887417 gtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaaaatcatgaaatgttttttttaaaagttaacatattaatatgataaa 25887320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 43230476 - 43230364
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| |  ||||| ||| |||| | | ||||  |||||||||| |||||||||||||||| ||| |||| | |||||| ||||||||||||    
T  43230476 gtgtgtttggatgtagggtttatgagaggaaagaaggggagagtttactttttatttttaaattacggacact-tgaattttttttttaaaagttaacat 43230378  T
Q  216 attaacatgataaa 229  Q
    ||||||||||||||    
T  43230377 attaacatgataaa 43230364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 1051520 - 1051614
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||  || ||||  ||| || |||||||||||||||||||| || ||||||| |||||||||||||||||||||| ||||||||||    
T  1051520 gtttaggaggggaatagaggggagggttaacatttcatttttaaattacggacac-atgaaatgttttttaaaaagttaacatatt-acatgataaa 1051614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 48881560 - 48881646
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| | ||| ||||| ||||    
T  48881560 ggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataatttt 48881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 39856107 - 39856038
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  39856107 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 39856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 41008425 - 41008309
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt--ttttaaaaa 207  Q
    |||| |||||||||||||| |  |||||||||||||||| |   ||  |||||| ||||||||||||||||||||||||||||  | ||  | || ||||    
T  41008425 tttagggtgtgtttggatgcagggtttaggaggggaaggaa---ga--gtttacatttcatttttaaattacggatactatgatttttttgtcttcaaaa 41008331  T
Q  208 gttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||    
T  41008330 gttaacatattaacatgataaa 41008309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 36267555 - 36267635
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||| ||||| ||||||||||||||||| ||| ||||    
T  36267555 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaat 36267635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 22163167 - 22163225
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||||||||    
T  22163167 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaa 22163225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 22221875 - 22221933
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||||||||    
T  22221875 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaa 22221933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 31571712 - 31571643
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  31571712 ggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacgga 31571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 19835906 - 19835838
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa 228  Q
    ||||||||||||||||||||||||| ||||| |||| || |||||||| |||| ||| |||||| ||||    
T  19835906 ttacttttcatttttaaattacggaaactataaaatgttctttaaaaaattaaaataataacatcataa 19835838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 31553182 - 31553287
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  |||||||||||||||||| | ||  ||  |||||| ||||| |||| ||||| | |||||||| |||||||||||||    
T  31553182 tttagggtgtgtttggatggag-gtttaggaggggaagggaggagagggtc-acttttaatttt-aaataacggacattatgaaatgttttttaaaaagt 31553278  T
Q  210 taacatatt 218  Q
    |||||||||    
T  31553279 taacatatt 31553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 47229888 - 47229948
Alignment:
Q  169 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||| ||||| || |||||||||||| ||||||||  |||||||||||||||||||    
T  47229888 atttttaaactacgggtattatgaaatatttcttaaaaagcgaacatattaacatgataaa 47229948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 33519290 - 33519224
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| | ||||||||||    
T  33519290 ggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 13771188 - 13771119
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||| ||| ||  |||||||||||||||||| | ||  ||||||||||| |||||||||||||||    
T  13771188 ggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacgga 13771119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 17853067 - 17852962
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaat 251  Q
    |||||||||||||||||||||||   ||||||||| | ||||||||||| ||| |||  ||||||||||        |||| ||||||||||||||||||    
T  17853067 ttacttttcatttttaaattacgagcactatgaaa-agtttttaaaaagataaaataacaacatgataaacgatcatataatacctcaatcacacttaat 17852969  T
Q  252 ttatttt 258  Q
    |||||||    
T  17852968 ttatttt 17852962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 28074105 - 28074174
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    | ||||||| |||||||||||||||    
T  28074105 ggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacgga 28074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 232
Target Start/End: Original strand, 30592255 - 30592372
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||| ||||||||||   |||||||||| |||||| ||||  | ||||||||| |||||||||||| || ||||| ||||  |||||||||| || | |    
T  30592255 ggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaa 30592354  T
Q  215 tattaacatgataaataa 232  Q
    || | | |||||||||||    
T  30592355 taatcatatgataaataa 30592372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 34228561 - 34228492
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||| || ||| |||||||||| ||||||| ||||   ||||||||||||||| ||||||||||    
T  34228561 ggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacgga 34228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 2087786 - 2087833
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  2087786 ttacttttcttttttaaattacggatattataaaataatttttaaaaa 2087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 30891039 - 30891078
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatat 197  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  30891039 gtttacttttcatttttaaattacggacactataaaatat 30891078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 37417706 - 37417749
Alignment:
Q  186 actatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||    
T  37417706 actatgaaatgttttctaaaaagttaacatattcacatgataaa 37417749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 37925843 - 37925910
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  37925843 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacg 37925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 34228364 - 34228471
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 250  Q
    |||||||| ||||||  ||||||||| ||||||||   ||| | |||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34228364 tttactttacattttgtaattacggacactatgaatgttttataaaaaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaa 34228463  T
Q  251 tttatttt 258  Q
    ||||||||    
T  34228464 tttatttt 34228471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 47390852 - 47390922
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||| ||||||||||||| ||  | ||||||||||||||||  |||  ||||||||||| |||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 26366009 - 26365900
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||| |||  ||||| || |||||| || ||||  ||||  ||||| ||||||||||| ||||||||  |||||||||||  ||| |||| ||    
T  26366009 gtgtgtttggacggagggtttaagatgggaagagaggggatagtttgattttcgtttttaaattatggatactacaaaatattttttttaaaattaaaat 26365910  T
Q  216 attaacatga 225  Q
    | ||||||||    
T  26365909 aataacatga 26365900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 42087188 - 42087131
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 221  Q
    |||||||||||||||||||| || |||  ||  ||||||||||||||| |||||||||    
T  42087188 ttttcatttttaaattacgggtattatacaaagttttttaaaaagttagcatattaac 42087131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 33655349 - 33655285
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||||||||||| ||  ||||||||||||||| || | ||  ||||||||||| |||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 34235208 - 34235180
Alignment:
Q  157 tgtttacttttcatttttaaattacggat 185  Q
    |||||||||||||||||||||||||||||    
T  34235208 tgtttacttttcatttttaaattacggat 34235180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 258
Target Start/End: Complemental strand, 10650661 - 10650520
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||| |||||||| ||||||||||||| | ||| ||||||||||  |||||||||||||||||||||||||| |||| ||||||||    
T  10650661 tttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacggatactatgaaatgttttataaaaagt 10650562  T
Q  210 taacatattaacatgataaataacacctcaatcacacttaatttatttt 258  Q
    |||||||||| ||||||       || ||||||||||||||||||||||    
T  10650561 taacatattaccatgat-------acttcaatcacacttaatttatttt 10650520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 13634953 - 13634839
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  | ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  13634953 ggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttttaaaaagttaaca 13634854  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  13634853 tattaacatgataaa 13634839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 115 - 215
Target Start/End: Complemental strand, 1658055 - 1657955
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaaagttaaca 1657956  T
Q  215 t 215  Q
    |    
T  1657955 t 1657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 7544383 - 7544264
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  |||||||||||||||| | ||||  ||||  ||||||||||||||||||||| |||||||||| |||||||||||||    
T  7544383 tttaaggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttttaaaaagt 7544284  T
Q  210 taacatattaacatgataaa 229  Q
    || ||||||||||| |||||    
T  7544283 tagcatattaacataataaa 7544264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 14245090 - 14245204
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| ||||||||||||||| ||| |||||| ||||||| ||||||||||    
T  14245090 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaagttaaca 14245189  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  14245190 tattaacatgataaa 14245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 8502837 - 8502949
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| || ||||| ||||||||  ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8502837 ggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaatattttttaaaaagttaaca 8502936  T
Q  215 tattaacatgata 227  Q
     ||||| ||||||    
T  8502937 aattaatatgata 8502949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 36363271 - 36363160
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 217  Q
    |||||||||||||  |||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttttagaaagttaacatat 36363172  T
Q  218 taacatgataaa 229  Q
    || |||||||||    
T  36363171 tagcatgataaa 36363160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 37607136 - 37607022
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37607136 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgttttataaaaagttaaca 37607037  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  37607036 tattaacatgataaa 37607022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 37779345 - 37779231
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37779345 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgttttataaaaagttaaca 37779246  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  37779245 tattaacatgataaa 37779231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 16938721 - 16938606
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  |||||  ||||||||||||||||| || |||||||||| ||||||||| ||||||||    
T  16938721 ggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttttaaagagttaaca 16938622  T
Q  215 tattaacatgataaat 230  Q
    | ||||||||||||||    
T  16938621 tgttaacatgataaat 16938606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 26415136 - 26415021
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac 213  Q
    ||||||||||||||||  ||||| |||||| || ||| ||||  ||||||||||||||||||| |||| || |||||||||| |||| ||||||||||||    
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatgttttataaaaagttaac 26415037  T
Q  214 atattaacatgataaa 229  Q
    ||||||||||||||||    
T  26415036 atattaacatgataaa 26415021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 28279478 - 28279593
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||| ||| ||||| ||  | |||  |||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||    
T  28279478 ggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgttttttaaaaagttaaca 28279577  T
Q  215 tattaacatgataaat 230  Q
    ||||||||||||||||    
T  28279578 tattaacatgataaat 28279593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 9798615 - 9798724
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||||||   |||||||||  |||||||| ||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||    
T  9798615 gtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaatgttttttaaaaagtcaatat 9798714  T
Q  216 attaacatga 225  Q
     |||||||||    
T  9798715 tttaacatga 9798724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 4373611 - 4373683
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  4373611 gtttacttttaatttttaaattacggacactgtgaaatatttttttaaaagttaacatattaacatgataaat 4373683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 10476275 - 10476156
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||| ||||||||| | ||||||||||||||   |||||||||||||| | |||||      
T  10476275 tttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatatttataaaaaaaa 10476176  T
Q  210 taacatattaacatgataaa 229  Q
     |||||||||| ||||||||    
T  10476175 aaacatattaagatgataaa 10476156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 36392195 - 36392266
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||||| || |||||||||| |||| ||||||||||||||||||||||||||||    
T  36392195 gtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaacatgataaa 36392266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 20146917 - 20146981
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa 228  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  20146917 ttttcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaacatgataa 20146981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 10072692 - 10072763
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||| ||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||    
T  10072692 gtttacttttcatatttaaattgtgagtactatgaaatattttttaaaaagttaacatattaacatgataaa 10072763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 37551647 - 37551535
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37551647 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37551550  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  37551549 tattaacatgataaa 37551535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 37654477 - 37654365
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37654477 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37654380  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  37654379 tattaacatgataaa 37654365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 20513491 - 20513561
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||||| |||||||||    
T  20513491 tttacttttcatttttaaactacagacactatgaaatgttttttaaaaagttaacatattatcatgataaa 20513561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 43607 - 43535
Alignment:
Q  158 gtttacttttcatttttaaa-ttacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  43607 gtttacttttcatttttaaaattacgaacactatgaaatattttttgaaaagttaacatattaacataataaa 43535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 9857072 - 9857008
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  9857072 tttcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaacataataaa 9857008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 16501836 - 16501907
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    |||| ||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||| ||||||    
T  16501836 tttagttttcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaacataataaat 16501907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 22023568 - 22023495
Alignment:
Q  158 gtttacttttcatttttaaattacggatact-atgaaatattttttaaaaa-gttaacatattaacatgataaa 229  Q
    ||||||||||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||    
T  22023568 gtttacttttcatttataaattacggatatttatgaaatgttttttaaaaaagttaacatattaacatgataaa 22023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 32727822 - 32727893
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||| ||| ||||||||||||||| || ||||||||||||||||||||   |||||||||||||||||||    
T  32727822 gtttacattttatttttaaattacgggtattatgaaatattttttaaaaaacgaacatattaacatgataaa 32727893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 14245288 - 14245202
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||||||||||||||||||| ||| |||||| |||||    
T  14245288 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgttttt 14245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 11757144 - 11757070
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactat 190  Q
    |||||||||||||||  ||||| |||||||||||| ||||  |||||  |||||||||||||||||||| |||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggacactat 11757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 17024270 - 17024336
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatga 225  Q
    ||||||||||||||||||||| | || | |||||||| || |||||||||||| |||||||||||||    
T  17024270 tttacttttcatttttaaattgcagacattatgaaatgttctttaaaaagttatcatattaacatga 17024336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 13634713 - 13634782
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  13634713 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 13634782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 17780279 - 17780340
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatatt 218  Q
    |||||||||||| |||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  17780279 gtttacttttcagttttaaattacggatattataaaatgtttttttaaaaagttaacatatt 17780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 26414895 - 26414964
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  26414895 ggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacgga 26414964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 4423404 - 4423336
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 232  Q
    ||||||||||||||||||| | | ||||||||||||||| |||| ||| ||||||||| | ||||||||    
T  4423404 ttttcatttttaaattacgaacattatgaaatatttttttaaaatttagcatattaacgtaataaataa 4423336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 10650427 - 10650517
Alignment:
Q  113 atggtgtgtttggatggaaagtttaggaggggaa--gggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    |||||| |||||||||||   |||||||||||||  |||| ||||   ||||||||| |||||||||||||||| |||||||||| |||||    
T  10650427 atggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgttttt 10650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 34980812 - 34980879
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||| |||||||||||||||||| || |  ||| |||||| ||||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacg 34980879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 11419237 - 11419302
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 223  Q
    |||||||||||||||| |||||| ||| | ||| |||| ||||| ||||||| |||||||||||||    
T  11419237 gtttacttttcattttcaaattaaggacaatataaaatgtttttaaaaaagtaaacatattaacat 11419302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 2556215 - 2556167
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa 206  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  2556215 gtttacttttcatttttaaattatggatgatataaaatattttttaaaa 2556167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaa 176  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 29002251 - 29002322
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||| | | ||||| |||| ||||||  |||   |||||||||||||||||||    
T  29002251 gtttacttttcatttttaaattatgaacactataaaatgttttttttaaaaacaacatattaacatgataaa 29002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 10476028 - 10476090
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 177  Q
    |||||||||| || ||  |||||||||||||||||||| ||  ||||||||||| ||||||||    
T  10476028 ggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 33744190 - 33744260
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||| ||||||||||||||||  ||| ||| || ||||||| ||||  ||||||||||| |||||||||||    
T  33744190 tttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 40815299 - 40815365
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||||| |||  ||||||||||||||||| | ||   |||||||||| ||||||||||||    
T  40815299 ggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 16938481 - 16938550
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| ||||||| |||||||    
T  16938481 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacgga 16938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 2550397 - 2550441
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    |||||||||||||||||||||||| || ||||||| || ||||||    
T  2550397 gtttacttttcatttttaaattacagacactatgatatgtttttt 2550441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 45742132 - 45742018
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||| |  ||||||| ||| |||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  45742132 ggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaaca 45742033  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  45742032 tattaacatgataaa 45742018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 54935311 - 54935197
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||||||| | ||||||||||||| ||    
T  54935311 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatgtattttaaaaagttatca 54935212  T
Q  215 tattaacatgataaa 229  Q
    |||||| ||||||||    
T  54935211 tattaatatgataaa 54935197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 31348340 - 31348437
Alignment:
Q  132 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||| |||||||||||| || |  ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  31348340 agtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaa 31348437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 5730827 - 5730947
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  5730827 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 5730926  T
Q  210 taacatattaacatgataaat 230  Q
    |||||||||||||||||||||    
T  5730927 taacatattaacatgataaat 5730947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 41174587 - 41174472
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||| ||| ||| ||||||||||  |||||||||||||| ||    
T  41174587 ggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggtttttaaaaagttagca 41174488  T
Q  215 tattaacatgataaat 230  Q
    ||||||||| ||||||    
T  41174487 tattaacataataaat 41174472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 49735470 - 49735584
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||||||||||||||||||| |  ||||||| | |||||||||||||||     
T  49735470 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacc 49735569  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  49735570 tattaacatgataaa 49735584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 54320676 - 54320562
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  |||| |||||||||||||||| |||||||||  ||||||||||||||| ||    
T  54320676 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaacgttttttaaaaagttagca 54320577  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  54320576 tattaacatgataaa 54320562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 27735987 - 27735872
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| |  |  ||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||| ||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagca 27735888  T
Q  215 tattaacatgataaat 230  Q
    ||||||||||||||||    
T  27735887 tattaacatgataaat 27735872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 24565348 - 24565462
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||| |||||||| ||||||    ||||  ||||||||||||||||||||||||||||| || |||||  ||||||||||||||||     
T  24565348 ggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacggatattacgaaatgctttttaaaaagttaact 24565447  T
Q  215 tattaacatgataaa 229  Q
    ||||||| |||||||    
T  24565448 tattaacgtgataaa 24565462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 6938489 - 6938394
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 210  Q
    ||||||||||||||||| ||||| |||||||| ||| ||||  ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  6938489 ggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgttttttaaaaagtt 6938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 34111003 - 34110933
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  34111003 gtttactttttatttttaaattacg-atactgtgaaatgttttttaaaaagttaacatattaacatgataaa 34110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 37711371 - 37711282
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt 198  Q
    ||||| ||||||||||||||||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||||| |||||||    
T  37711371 ttttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaatatt 37711282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 16400987 - 16400928
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  16400987 tttttaaattagggacactatgaaatagtttttaaaaagttaacatattaacatgataaa 16400928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 35248922 - 35248811
Alignment:
Q  121 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 220  Q
    ||||||||||  ||||||||| || ||||| ||||  |||||||||||| |||||||||| ||| |||    |||||||||| |||||||||| ||||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaa 35248823  T
Q  221 catgataaataa 232  Q
    ||||||||||||    
T  35248822 catgataaataa 35248811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 31348563 - 31348494
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  31348563 ggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 31348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 17938115 - 17938223
Alignment:
Q  121 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 220  Q
    ||||||||||  |||||||||||||| ||| || |  ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| |||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataa 17938214  T
Q  221 catgataaa 229  Q
    |||||||||    
T  17938215 catgataaa 17938223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 29798478 - 29798422
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 220  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||    
T  29798478 ttttcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaa 29798422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 46007744 - 46007818
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaa--tattttttaaaaagttaacatattaacatgataaat 230  Q
    |||||||||||||||||||||||| || |  ||||||    ||||||||||||||||||||||||||||||||||    
T  46007744 gtttacttttcatttttaaattaccgacataatgaaaatgtttttttaaaaagttaacatattaacatgataaat 46007818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 36278450 - 36278376
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 232  Q
    ||||| ||||| |||||||||||| || |||| ||||||||||||| ||| ||||| |||||| |||||||||||    
T  36278450 gtttagttttcgtttttaaattacagacactacgaaatattttttataaatttaacgtattaatatgataaataa 36278376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 1968601 - 1968532
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| || |  ||||| |||||||||||||||||||||    
T  1968601 ggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacgga 1968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 22659413 - 22659317
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcattttt-aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||  |||||| | || |||||||||||||||||| ||||||| || || || ||||||||||| |||| |||| |||||||||| |||||    
T  22659413 tttaggaggaaaagggaggagagtgtttacttttcattttttaaattacagacaccataaaatatttttttaaaaattaatatattaacataataaa 22659317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 21694910 - 21694981
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaa 204  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| ||||| ||||  |||||||    
T  21694910 gtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaa 21694981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 27735749 - 27735816
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||| ||  |||||||||||||||||| | ||  ||||| |||||||||||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacgga 27735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 46007942 - 46007879
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt 179  Q
    |||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 2248050 - 2247972
Alignment:
Q  108 gttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggata 186  Q
    |||| ||||||||||||||| ||  |||||||||| |||| || ||||  ||||||||||| |||||||||||| ||||    
T  2248050 gtttaatggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacagata 2247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 6891590 - 6891488
Alignment:
Q  127 tggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgat 226  Q
    |||| |||||||||||||||| || ||||  ||||  ||||| ||||||||||| ||| |||||||| | ||||| ||||| |||| ||| |||||| ||    
T  6891590 tggatagtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacattat 6891491  T
Q  227 aaa 229  Q
    |||    
T  6891490 aaa 6891488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 36151773 - 36151704
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||| | | ||||  ||||  ||||||||| ||||||||||||||||||||||    
T  36151773 tttacttttcatttttaaattatgaacactagaaaatgatttttaaaa-gttaacatattaacatgataaa 36151704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 26167118 - 26167065
Alignment:
Q  176 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||| ||| |||||| |||||| || |||||||||||||||||||||||    
T  26167118 aattacggacactttgaaatgtttttttaagagttaacatattaacatgataaa 26167065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 45132737 - 45132668
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||| || || |||||||||||||||| || | ||  ||||||||||| |||||||||||||||    
T  45132737 ggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacgga 45132668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 45911327 - 45911368
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  45911327 ttacttttcttttttaaattacggatactataaaatattttt 45911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 54576329 - 54576398
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  | ||||||||| |||||| ||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacgga 54576398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 54935069 - 54935137
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||  ||||||||||||||||||  ||||  ||||||||||| |||||||||||||    
T  54935069 ggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacg 54935137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 44784190 - 44784128
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 221  Q
    ||||||||||| ||||||||||||| | |||| |||||||||| | ||| ||||||||||||||    
T  44784190 gtttacttttcgtttttaaattacgaacactacgaaatattttct-aaacgttaacatattaac 44784128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 47433951 - 47433885
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||| | ||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||    
T  47433951 ggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattac 47433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 47846303 - 47846233
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||| ||||||||||||| ||  ||||| |||| ||||||||||||  ||||||||||  |||||||||||    
T  47846303 tttaaggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 55510407 - 55510326
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttt 200  Q
    ||||||||||||| |||||| ||||| |||  ||| ||  |||||||||| |||||||||||||| | ||||| |||||||||    
T  55510407 gtgtttggatggagagtttaagagggaaagaaatgtgagggtttactttt-atttttaaattacgaacactataaaatatttt 55510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 2247854 - 2247919
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||| | ||| |||| ||| ||||||  ||||| |||||| ||||||||    
T  2247854 ttttcatttttaaattacggacattataaaatgtttattaaaatcttaacttattaatatgataaa 2247919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 45132517 - 45132617
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcat-----ttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgata 227  Q
    ||||||||| ||||| || ||||  |||||||||||||     |||||||||| | | |||| ||||| |||| ||||||||||||||||||| ||||||    
T  45132517 gtttaggagcggaagagaggggatggtttacttttcataatctttttaaattatgtacactacgaaatgtttt-taaaaagttaacatattaaaatgata 45132615  T
Q  228 aa 229  Q
    ||    
T  45132616 aa 45132617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 37761467 - 37761555
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta 203  Q
    ||||||||||||| || ||||||||||| ||| ||| || |  ||| |||||| |||||||||||||| | |  || ||||||||||||    
T  37761467 ggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatatttttta 37761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 23748337 - 23748223
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||||||||| |||||| |||||||||| | ||||||||||||||||    
T  23748337 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagttaaca 23748238  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  23748237 tattaacatgataaa 23748223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 36347543 - 36347657
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||| |  |||||||||||||||||| | ||  ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  36347543 ggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttttaaatagttaaca 36347642  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  36347643 tattaacatgataaa 36347657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 8426879 - 8427024
Alignment:
Q  113 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 212  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  8426879 atggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttttaaaaagttaa 8426978  T
Q  213 catattaacatgat-aaataacacctcaatcacacttaatttatttt 258  Q
    |||  ||| ||||| | |||| || |||||| |||||||||||||||    
T  8426979 catgataa-atgatcatataatacttcaatcgcacttaatttatttt 8427024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 36046206 - 36046321
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  36046206 ggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgttttttaaaaagttaaca 36046305  T
Q  215 tattaacatgataaat 230  Q
    |||||||||| |||||    
T  36046306 tattaacatgttaaat 36046321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 15224733 - 15224811
Alignment:
Q  152 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaat 15224811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 34209706 - 34209592
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||| |  |||||| | |||| |||| || |  | ||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  34209706 ggtgtgtttggatgaagggtttagaatgggaggggagggaagagattacttttcatttttaaattacaaacactatgaaatattttttaaaaagttaaca 34209607  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  34209606 tattaacatgataaa 34209592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 9631802 - 9631688
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||||| ||||||   ||  ||| ||||||| ||||||||||||||| || ||||||| |  |||||||||||||||    
T  9631802 ggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatgtcctttaaaaagttaaca 9631703  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  9631702 tattaacatgataaa 9631688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 36566874 - 36566968
Alignment:
Q  137 aggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaa-tattttttaaaaagttaacatattaacatgataaat 230  Q
    |||||||||||||||| ||   |||||||||||||||||||||||||| | ||||||| | |||| |||||||||||||||||||||||||||||    
T  36566874 aggaggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaacatgataaat 36566968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 16565978 - 16565905
Alignment:
Q  156 atgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||    
T  16565978 atgtttactttttatttttaaattacggatactatgaaacgttttttaaaaagttaacatataaatatgataaa 16565905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 27926752 - 27926681
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||| ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||    
T  27926752 gtttatttttcatttttaaattacggatactattaaattttggttaaaaagttaacatattaacatgataaa 27926681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 39732774 - 39732845
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||||| | | |||||||| |||| ||||||||||||||||||||||||||||    
T  39732774 gtttacttttcatttttaaattacgaacattatgaaatgttttataaaaagttaacatattaacatgataaa 39732845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 39821868 - 39821796
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    ||||| ||||| ||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  39821868 gtttagttttcttttttaaattacggacactatgaaataatatttaaagagttaacatattaacatgataaat 39821796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 42316809 - 42316880
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||| |  | |||||||||| ||||||||||||||||| |||||||||||||||    
T  42316809 gtttacttttcatttttaaattgcaaacactatgaaatgttttttaaaaagttaacgtattaacatgataaa 42316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 40022615 - 40022510
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 213  Q
    |||||| |||||||||  ||||| |||| ||||||| ||||  |||||| ||||||||||||||||| || ||||||||||  ||||||||||||| |||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaagtaaac 40022516  T
Q  214 atatta 219  Q
    ||||||    
T  40022515 atatta 40022510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 1583272 - 1583222
Alignment:
Q  162 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 212  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1583272 acttttcatttttaaattacggacactatgaaatgttttttaaaaagttaa 1583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 17379994 - 17379940
Alignment:
Q  175 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaacatgataaa 17379940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 7681443 - 7681386
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  7681443 gtttactttttatttttaaattgcggatattatgaaatatttttttaaaagttaacat 7681386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 12541999 - 12541894
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  |||||||||  ||||||| ||| |  ||||||||||||    ||||||| |||||||| |||| |||||||||||||||||| |||    
T  12541999 tgtttggatggagggtttaggagaagaaggga-gggtagatttacttttcat----aaattacagatactataaaatgttttttaaaaagttaacacatt 12541905  T
Q  219 aacatgataaa 229  Q
    |||||||||||    
T  12541904 aacatgataaa 12541894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 36347783 - 36347714
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  36347783 ggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacgga 36347714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 35736429 - 35736337
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||||||||||||||  |||||||||| ||||||| ||||  | | ||||||| |||||||||| |||| |||||||||  |||||||||||    
T  35736429 ggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaaagttttttaaaaa 35736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 887351 - 887261
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaa 206  Q
    ||||||| |||||| || |||||||||||||||||| ||||  | ||||||||| |||||||||||||||| |||| |||| ||||| ||||    
T  887351 ggtgtgtctggatg-aaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacggatgctataaaatgtttttaaaaa 887261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 19566822 - 19566937
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 213  Q
    |||||||||||| |||  |||||| |||| ||| ||  |||  |||||||| ||| ||||||||||| || ||||||||||  ||||||||||||||| |    
T  19566822 ggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaatgtttttttaaaaagttagc 19566921  T
Q  214 atattaacatgataaa 229  Q
    ||||||| ||||||||    
T  19566922 atattaaaatgataaa 19566937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 28262500 - 28262559
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||| | | ||||||||||||||||||||||||||| ||| ||||||||||||    
T  28262500 tttttaaattatgaacactatgaaatattttttaaaaagttaatataataacatgataaa 28262559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 45257555 - 45257456
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 207  Q
    ||||| ||||||||||||||||   ||||||| ||||||||| | ||  ||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||    
T  45257555 ttttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaa 45257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 31795772 - 31795885
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||||||  ||||| |||| ||||||| ||||    ||||||||| ||||||||||||||| |||||||||  |||||| ||||  ||| ||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaat 31795871  T
Q  216 attaacatgataaa 229  Q
    |  |||||||||||    
T  31795872 aacaacatgataaa 31795885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 9426985 - 9427053
Alignment:
Q  113 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||||||| |||||||||||||||||||||| | ||  ||||  ||||| ||||||||||||    
T  9426985 atggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 15224936 - 15224868
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 183  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||||||||| ||||||||||||||    
T  15224936 ggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgg 15224868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 17380083 - 17380007
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatg 191  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||  ||||||||||||||||||||| ||||||    
T  17380083 ggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 29525768 - 29525847
Alignment:
Q  152 gggaatgtttacttttcatttttaaattacggatactatgaa--atattttttaaaaagttaacatattaacatgataaa 229  Q
    |||| |||| |||||||| ||||||||||| |||||||||||   | ||||||  |||||||||||||||||||||||||    
T  29525768 gggagtgttcacttttcaattttaaattactgatactatgaatttttttttttggaaagttaacatattaacatgataaa 29525847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 34187577 - 34187644
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| || |||||||||| |||||| | ||||| ||| |||||| ||||||||||||||    
T  34187577 ggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacg 34187644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 39732978 - 39732901
Alignment:
Q  107 tgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||| ||||||||||||| ||| ||||  |||||||||| | ||||   |||||||||| |||||||||||||||    
T  39732978 tgttttagggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacgga 39732901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 8427110 - 8427051
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 177  Q
    |||||||||| ||  ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 22356252 - 22356177
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||| ||||||||||||| ||   ||||||||||||||||| ||||  ||| | ||||| |||||||||||||||    
T  22356252 ttttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacgga 22356177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 31061361 - 31061428
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||| |||||||||||||| ||||||||  | | ||||||  |||||||||||||    
T  31061361 ggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacg 31061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 9427179 - 9427113
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||| ||||| ||||  ||||||  ||||||| ||||||| |||||||||    
T  9427179 ttttcatttttaaattacggacactataaaatgtttttttttaaagttagcatattagcatgataaa 9427113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 35736172 - 35736246
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||| ||||||||||||| ||  |||||||||||||||||| ||||  | ||| ||||| ||||||||| |||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacgga 35736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 16713494 - 16713587
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    ||||||||| ||| ||  ||||| |||||||||||| ||||  ||| | |||| |||||||||||||| | | ||| ||||||||||| |||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaag 16713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 36046443 - 36046375
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  ||||| |||||||||||| ||| | ||||||||||  |||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaaggga-ggggaggtttacttttgttttttaaattacgga 36046375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 41841678 - 41841750
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||| ||||||||||||| ||   |||||||||| |||||||||||  ||||  ||||| ||||||||||||    
T  41841678 ttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 34634385 - 34634277
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||||| ||||||||||||||||||||| ||  ||| | |||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  34634385 ggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatatcttttaaaaagttaaca 34634286  T
Q  215 tattaacat 223  Q
    |||||||||    
T  34634285 tattaacat 34634277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 31543078 - 31543188
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  ||||| |||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  31543078 tgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatatt 31543177  T
Q  219 aacatgataaa 229  Q
    ||||| |||||    
T  31543178 aacatcataaa 31543188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 11785768 - 11785654
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||||| ||| || ||||  ||||  ||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  11785768 ggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatattttttaaaaagttagca 11785669  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  11785668 tattaacatgataaa 11785654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 11575415 - 11575522
Alignment:
Q  121 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 220  Q
    ||||||||||   |||||||| |||||||| ||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11575415 tttggatggaggatttaggagaggaaggga-gggagggtttacttttcattcttaaattaaggatactatgaaatgttttttaaaaagttaacatattaa 11575513  T
Q  221 catgataaa 229  Q
    |||||||||    
T  11575514 catgataaa 11575522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 31738665 - 31738550
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||  | ||||  |||||  |||||||||||||||||||| ||||| ||||||||||| || ||||||||    
T  31738665 ggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatattttttgaagagttaaca 31738566  T
Q  215 tattaacatgataaat 230  Q
    ||||||||||||||||    
T  31738565 tattaacatgataaat 31738550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 1281341 - 1281271
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  1281341 tttagttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacataataaa 1281271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 36309081 - 36308971
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||| ||||||||||| | | | |||||||| |||| |||||| ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaaagtaaacatatt 36308982  T
Q  219 aacatgataaa 229  Q
    |||||||||||    
T  36308981 aacatgataaa 36308971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 29690925 - 29691038
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| |||||||||||||  ||| || | ||  ||||||||||||||| |||  ||| ||||||| ||||||||||| |||||||||||||    
T  29690925 gtgtgtttggatgaaaagtttaggaggaaaagagacgagagagtttacttttcatttataacatactgatactaggaaatatttttaaaaaagttaacat 29691024  T
Q  216 attaacatgataaa 229  Q
    ||||||||||||||    
T  29691025 attaacatgataaa 29691038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 1026894 - 1026965
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  1026894 gtttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgataaa 1026965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 3726859 - 3726965
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    ||||| ||||||||||||||||  ||||||||||||||||||  |||  ||||| ||||||||||||||||||||| || ||| ||| ||||||||| ||    
T  3726859 ttttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacaccatggaatgttttttaaatag 3726958  T
Q  209 ttaacat 215  Q
    |||||||    
T  3726959 ttaacat 3726965  T

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Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 222
Target Start/End: Complemental strand, 16653190 - 16653084
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| |  ||||| |||||||||||| | ||  ||||| ||||||||||||||||||||| | |||||||| ||||| |||||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgtttttgaaaaagttaacat 16653091  T
Q  216 attaaca 222  Q
    |||||||    
T  16653090 attaaca 16653084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 30479721 - 30479834
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 216  Q
    ||||||||||||||   ||||||||||| | ||| ||||  ||| |||||||||||||||||||| || |||||||||| | ||||||||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtcttttaaaaagttaacata 30479820  T
Q  217 ttaacatgataaat 230  Q
    ||||  ||||||||    
T  30479821 ttaaggtgataaat 30479834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 9718530 - 9718595
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||| |||||||||||||||||    
T  9718530 ttttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaacatgataaa 9718595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 30664566 - 30664489
Alignment:
Q  152 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||| |||||| |||||||||||||| | ||  ||||||||||||||||||||||||||||| ||||||||    
T  30664566 gggaatgtttatttttcagttttaaattacggacattacaaaatattttttaaaaagttaacatattaatatgataaa 30664489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 2248666 - 2248586
Alignment:
Q  143 ggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 223  Q
    |||||||| ||||  ||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaatatttttttaaaagttaacttattaacat 2248586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 37923123 - 37923195
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 230  Q
    ||||||||||||||||||||||| | | |||||||||| ||||||||| |||||| |||||||||||||||||    
T  37923123 gtttacttttcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaacatgataaat 37923195  T

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Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 29358385 - 29358455
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||    
T  29358385 gtttactttttatttttaaattacggacactataaaatattttttaaaaa-ttaacatattaacattataaa 29358455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 11033659 - 11033545
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaaca 214  Q
    |||| ||| ||||||  |||||||||| ||||||| | |||  ||||||||||| |||||||||| | ||| ||||||||  ||||||||||| ||||||    
T  11033659 gtgtctttagatggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaaattaaca 11033560  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  11033559 tattaacatgataaa 11033545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 43732929 - 43732860
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  43732929 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 43732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 10028347 - 10028259
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaa 220  Q
    ||||||||| ||||| || ||||  |||||||||| | |||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  10028347 gtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatattttttttaaaagttaacatattaa 10028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 7502999 - 7503070
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||| |||| ||||||||||||||  | |||||||||| |||| ||||||||||||||||||||||||||||    
T  7502999 gtttgctttccatttttaaattaccaaaactatgaaatgttttataaaaagttaacatattaacatgataaa 7503070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 7979340 - 7979265
Alignment:
Q  157 tgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 232  Q
    |||||||||||||||||||||||||||| ||  |||||| ||| ||||||  ||||| ||||||||||||||||||    
T  7979340 tgtttacttttcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaacatgataaataa 7979265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 6315255 - 6315190
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||| |||||||    
T  6315255 ttttcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaacttgataaa 6315190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 28083934 - 28083870
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||| ||||||||||||||||||||||| || ||||||||| ||||||||| | |||||||||||    
T  28083934 tttcttttttaaattacggatactatgatatgttttttaaagagttaacatgtcaacatgataaa 28083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 4247563 - 4247633
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||| |||||||||||||||  ||| | ||||||||||||| |||||||||||||| |||||||||    
T  4247563 gtttactttttatttttaaattacggc-actttaaaatattttttaagaagttaacatattagcatgataaa 4247633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 9718730 - 9718656
Alignment:
Q  106 ttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||||| | ||||||||||||| ||  |||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  9718730 ttgtttcagggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 1281149 - 1281214
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||| ||  |||||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacgga 1281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 16024394 - 16024327
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||||||   ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacgga 16024327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 31543319 - 31543249
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||| ||||||||| ||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 35694828 - 35694862
Alignment:
Q  186 actatgaaatattttttaaaaagttaacatattaa 220  Q
    |||||||||||||||||||||||||||||||||||    
T  35694828 actatgaaatattttttaaaaagttaacatattaa 35694862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 37032561 - 37032507
Alignment:
Q  175 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||| |||| ||| | |||||||||||||||||||||||| ||||||||    
T  37032561 aaattacggacactaggaagtgttttttaaaaagttaacatattaagatgataaa 37032507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 13405178 - 13405104
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaag----ttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||||||| | ||  ||||||||||| |||||    ||||| |||||||||||||||    
T  13405178 tttacttttcatttttaaattacggacattaaaaaatatttttttaaaagtgaattaacgtattaacatgataaa 13405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 41103506 - 41103622
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcattttt--aaattacggatactatgaaatattttttaaaaagttaa 212  Q
    ||||||||||||||||  ||||||||||||||| || ||||  ||||  ||||| |||||  |||||| ||| |||||||||  ||||| ||||| ||||    
T  41103506 ggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaattaa 41103605  T
Q  213 catattaacatgataaa 229  Q
     | | ||||||||||||    
T  41103606 aacaataacatgataaa 41103622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 2248454 - 2248522
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 183  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||| | ||| | ||||||||||||||    
T  2248454 ggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacgg 2248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 8815383 - 8815316
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||  |||||||||||| ||||| ||||  ||| |||||| ||||||||||||||    
T  8815383 ggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 24243052 - 24243164
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||||| |||||| || ||||||||| ||||    |||||||||||||| ||||||| || ||||| |||| | ||||||||| || | |    
T  24243052 ggtgtgtttggatggagagtttaaga-gggaagggaagggatgacttacttttcattttgaaattac-gacactataaaatgtcttttaaaaa-ttgaaa 24243148  T
Q  215 tattaacatgataaat 230  Q
    || |||||||||||||    
T  24243149 taataacatgataaat 24243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 5562012 - 5562058
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaa 206  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||    
T  5562012 ttacttttcatttttaaattacgtataatataaattattttttaaaa 5562058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 7394701 - 7394636
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 30365126 - 30365219
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    ||||| ||||||||||||| ||  |||||||||| ||| ||| ||||  ||| |||||| |||||||||||||| | |  || |||||||||||    
T  30365126 ttttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttt 30365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 40990183 - 40990299
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt-acggatactatgaaatatttttt--aaaaagtta 211  Q
    ||||||||||||||||  |||| ||||  ||| ||| ||||  |||||  |||||||||| |||| |  || |||||||||| ||||||  ||| |||||    
T  40990183 ggtgtgtttggatggagggtttgggagaagaaaggaggggagggtttatatttcattttttaatttatagacactatgaaatgttttttttaaagagtta 40990282  T
Q  212 acatattaacatgataa 228  Q
    |||||||||||||||||    
T  40990283 acatattaacatgataa 40990299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 42919912 - 42919879
Alignment:
Q  173 ttaaattacggatactatgaaatattttttaaaa 206  Q
    |||||||||||||||||| |||||||||||||||    
T  42919912 ttaaattacggatactataaaatattttttaaaa 42919879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 7503202 - 7503126
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 185  Q
    ||||| ||||||||||||| ||   ||| |||||||| |||| ||||  ||||||||||| ||||||||||| ||||    
T  7503202 ttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggat 7503126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||||||||||  |  |||||||| | ||||||| ||||  ||||||||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 33922680 - 33922648
Alignment:
Q  197 ttttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||| |||||||||    
T  33922680 ttttttaaaaagttaacatattatcatgataaa 33922648  T

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Target: scaffold0262 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 16302 - 16412
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  ||||||||||| || ||| ||||  ||||||||||||||||||||||| | | |||||||||| |||| ||||| |||||||||||    
T  16302 tgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgttttataaaacgttaacatatt 16401  T
Q  219 aacatgataaa 229  Q
    |||||||||||    
T  16402 aacatgataaa 16412  T

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Target: scaffold0171 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 16173 - 16082
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatga 225  Q
    ||||||||||||||||| |  |  ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  16173 tttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaatatga 16082  T

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Target: scaffold0198 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||||||||| |||||||||||| || |||||||||| |||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

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Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 1377 - 1300
Alignment:
Q  152 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||  |||||||||    
T  1377 gggaaggtttacttttcatttttaaattatgaacactatgaaatgttttttaaaaagttaacatattgtcatgataaa 1300  T

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Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 1175 - 1243
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacgga 1243  T

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Target: scaffold0294 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 15507 - 15391
Alignment:
Q  112 tatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtta 211  Q
    |||||||||||||||||||  |||||||| |||||||||   ||   | ||||||| |||||||||||||||| |||||| ||| |||||||||| || |    
T  15507 tatggtgtgtttggatggagggtttaggaagggaagggaaatgaggatctactttttatttttaaattacggacactatg-aatgttttttaaaaggtca 15409  T
Q  212 acatattaacatgataaa 229  Q
    |||||||||| |||||||    
T  15408 acatattaacgtgataaa 15391  T

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Target: scaffold0341 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 18968 - 18897
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||||||||||    
T  18968 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaa 18897  T

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Target: scaffold0096 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 6780 - 6717
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 223  Q
    ||||||||| ||||||||||||| | |||||||||||||||| ||||| |||| ||||||||||    
T  6780 ttacttttcgtttttaaattacgcacactatgaaatatttttaaaaaaattaaaatattaacat 6717  T

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Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 6581 - 6652
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||| ||||||||||||| |||  ||||||||| ||||||| ||||  ||||||||||| ||||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 242456 - 242366
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||||||||||||  |||||  ||||||||||| ||||  ||||||||||| ||||||||||||||| | ||| ||||  ||||||||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaa 242366  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 17780 - 17716
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||||||||  ||||||||| |||||||| |||   ||||||||||| ||||||||||||    
T  17780 ggtgtgtttggatggagggtttaggagtggaagggagggg--ggtttacttttcttttttaaattac 17716  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    ||||||||||||||  ||||||||||| |||||| ||||  ||||||| ||| |||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

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