View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16478_high_14 (Length: 249)
Name: NF16478_high_14
Description: NF16478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16478_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 54 - 245
Target Start/End: Original strand, 34557287 - 34557478
Alignment:
| Q |
54 |
ttcagtagatcactaagtgtaacagattggacgtccaaaccgtttcattttgcttgagagaaatgaaatatacactgaatcatgcttcctaaggagagaa |
153 |
Q |
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| T |
34557287 |
ttcagtagatcaccaagtgtaacagattggacgtccaaaccgtttcattttgcttgagagaaatgaaatatatactgaatcaagcttcctaaggagagaa |
34557386 |
T |
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| Q |
154 |
tataaaaactttgactttgtcaatccacatataacgacagactgacatatttacaaaacaatctatcaacacaaggaatacctttgcttctc |
245 |
Q |
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| T |
34557387 |
tataaaaactttgactttgtcaatccacatataacgacagcctgacatatttacaaaacaatctatcaacacaaggagtaccttttcttctc |
34557478 |
T |
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