View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16480_high_20 (Length: 243)
Name: NF16480_high_20
Description: NF16480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16480_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 9978445 - 9978653
Alignment:
| Q |
16 |
atgaaaaggcgcgaaaaatacttacatcgagcgagaagagatgatcctcctccaatatctcctccacatttcgcttggaagctttcttcacatctacaat |
115 |
Q |
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| T |
9978445 |
atgaaaaggcgcgaaaaatacttacatcgagcgagaagagatgatcctcctccaatatctcctccacatttcgcttggaagctttcttcacatctacaat |
9978544 |
T |
|
| Q |
116 |
catcaattcacattcaatttcatcgcatcaaccatcggaaatcaatgaacgaaaaagcttgaaagaagaagaagaattgtacattgaagaggagcagtga |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9978545 |
catcaattcacattcaatttcatcgcatcaaccatcggaaatcaatgaacgaaaaagcttgaaagaagaagaagaattgtacattgaagaggagcagtga |
9978644 |
T |
|
| Q |
216 |
gatgcgaaa |
224 |
Q |
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| T |
9978645 |
gatgcgaaa |
9978653 |
T |
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