View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16481_low_23 (Length: 231)

Name: NF16481_low_23
Description: NF16481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16481_low_23
NF16481_low_23
[»] chr6 (62 HSPs)
chr6 (1-231)||(26342002-26342232)
chr6 (1-231)||(28234453-28234683)
chr6 (91-231)||(28149917-28150056)
chr6 (1-231)||(28098437-28098667)
chr6 (1-231)||(28242693-28242923)
chr6 (32-231)||(28181034-28181233)
chr6 (1-231)||(28185255-28185485)
chr6 (7-231)||(27611070-27611294)
chr6 (1-231)||(28325370-28325600)
chr6 (7-231)||(27718447-27718671)
chr6 (5-231)||(27338133-27338359)
chr6 (5-231)||(27398873-27399099)
chr6 (97-231)||(28139526-28139660)
chr6 (1-231)||(28226839-28227069)
chr6 (128-229)||(27593090-27593191)
chr6 (7-231)||(26655884-26656108)
chr6 (7-231)||(26761855-26762079)
chr6 (91-231)||(26937073-26937213)
chr6 (7-231)||(27724913-27725137)
chr6 (128-231)||(27678962-27679065)
chr6 (89-231)||(25579696-25579838)
chr6 (10-231)||(31284186-31284407)
chr6 (91-227)||(26893543-26893679)
chr6 (7-227)||(27229127-27229347)
chr6 (7-231)||(27698562-27698786)
chr6 (91-231)||(28297781-28297921)
chr6 (91-231)||(28514152-28514292)
chr6 (148-231)||(2184324-2184407)
chr6 (128-231)||(26142881-26142984)
chr6 (7-230)||(27604774-27604997)
chr6 (128-231)||(27677682-27677785)
chr6 (128-231)||(27706470-27706573)
chr6 (128-231)||(25481758-25481861)
chr6 (7-230)||(26802337-26802560)
chr6 (128-231)||(26884179-26884282)
chr6 (34-230)||(29825949-29826145)
chr6 (148-231)||(2184934-2185017)
chr6 (128-231)||(25538556-25538659)
chr6 (7-230)||(28781034-28781257)
chr6 (7-231)||(26048740-26048964)
chr6 (7-231)||(26069909-26070133)
chr6 (91-231)||(26646458-26646598)
chr6 (91-231)||(26752426-26752566)
chr6 (151-231)||(26823879-26823959)
chr6 (128-231)||(26055942-26056045)
chr6 (128-231)||(26075912-26076015)
chr6 (7-230)||(27531266-27531489)
chr6 (91-231)||(26622955-26623095)
chr6 (91-231)||(26728933-26729073)
chr6 (7-197)||(28786173-28786363)
chr6 (7-197)||(28792294-28792484)
chr6 (194-231)||(26975134-26975171)
chr6 (151-231)||(26861655-26861735)
chr6 (49-136)||(26617263-26617350)
chr6 (49-136)||(26723191-26723278)
chr6 (193-231)||(26848741-26848779)
chr6 (193-231)||(27214498-27214536)
chr6 (193-231)||(27234692-27234730)
chr6 (194-231)||(25071741-25071778)
chr6 (154-231)||(27427674-27427751)
chr6 (43-135)||(27214348-27214440)
chr6 (43-135)||(27234788-27234880)
[»] chr2 (2 HSPs)
chr2 (16-231)||(3279592-3279807)
chr2 (194-231)||(17993752-17993789)
[»] scaffold0019 (1 HSPs)
scaffold0019 (32-231)||(58350-58549)
[»] scaffold0038 (4 HSPs)
scaffold0038 (1-231)||(34614-34844)
scaffold0038 (1-231)||(42855-43085)
scaffold0038 (1-231)||(116685-116915)
scaffold0038 (1-231)||(27337-27567)
[»] scaffold0349 (2 HSPs)
scaffold0349 (7-231)||(14424-14647)
scaffold0349 (7-231)||(3489-3714)
[»] chr4 (8 HSPs)
chr4 (7-231)||(18731559-18731783)
chr4 (151-231)||(18679622-18679702)
chr4 (151-230)||(18699456-18699535)
chr4 (151-231)||(18724140-18724220)
chr4 (91-231)||(5091022-5091162)
chr4 (151-231)||(18655532-18655612)
chr4 (154-231)||(17989108-17989185)
chr4 (154-231)||(18073804-18073881)
[»] chr1 (3 HSPs)
chr1 (91-231)||(268412-268552)
chr1 (187-231)||(28164417-28164461)
chr1 (151-230)||(28127735-28127814)
[»] scaffold0277 (2 HSPs)
scaffold0277 (7-231)||(4739-4963)
scaffold0277 (7-230)||(13701-13924)
[»] chr8 (4 HSPs)
chr8 (153-231)||(29273838-29273916)
chr8 (4-71)||(31903743-31903810)
chr8 (154-230)||(14794613-14794689)
chr8 (154-230)||(14801883-14801959)
[»] chr5 (1 HSPs)
chr5 (32-231)||(16688931-16689130)
[»] scaffold0419 (1 HSPs)
scaffold0419 (7-230)||(7420-7643)
[»] scaffold1254 (1 HSPs)
scaffold1254 (7-197)||(19-209)
[»] scaffold0003 (1 HSPs)
scaffold0003 (154-231)||(59612-59689)


Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 26342232 - 26342002
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| | ||||||||||    
T  26342232 tatgatgtgttcctcaattttaggggcattggcactcgctatggttttactggcaatatctatagagctctatgtgacggtggagtccgcaccttcattg 26342133  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26342132 atgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgc 26342033  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||||||||||||||||||    
T  26342032 ttcttcttcgttttgtttggacgaacttgtc 26342002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 28234453 - 28234683
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    ||||| |||||||| |||||||| || | | |||||||||||||||||||||  ||| |||| |||||||| ||| |||  ||| ||   ||||||||||    
T  28234453 tatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattg 28234552  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    |||| ||||||||||| ||||| ||  |||| |||| ||||| | |||| |||||||||||||| ||||||||||||||  | || |||||||| |||||    
T  28234553 atgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgc 28234652  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||| |||||||||||||||    
T  28234653 ttcttcttcattttgcttggacgaacttgtc 28234683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 28149917 - 28150056
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    |||||||||||||||| ||||||| |  |||| ||| ||||||||| ||||| | |||| |||||||||||||||||||||||||||||||| |||||||    
T  28149917 accttcattgatgatacggagctttaacgaggggacgaaatcacaccatcac-tctcaaggccattgaagagtccaggattttcattccaatcttctcta 28150015  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  28150016 tcaactatacttcttcttcattttgtttggacgaacttgtc 28150056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 28098667 - 28098437
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    ||||| ||||| || | |||||||||||   ||||||| ||||||||||| || ||| |||||| |||||| |||||| | |||||| | ||||||||||    
T  28098667 tatgacgtgtttcttaattttaggggcaccgacactcggtatggttttactggaaatctctacaaagctctttgtgacggaggagtccgcaccttcattg 28098568  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    |  |||  || ||||||| |||||| | |||||||||||| | |||||| ||||| ||||||||||||||||| |||||  | |||||||  ||||||||    
T  28098567 accataaagatcttcatgaaggtgatagaatcacacaatcccttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgc 28098468  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||| |||||||||||| |||||||||    
T  28098467 ttcttctttgttttgtttggatgaacttgtc 28098437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 28242693 - 28242923
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    |||||||| ||||| |||||||| || | | ||||||| ||||||||||| || ||| |||||| || ||| ||| | |  ||| |  | ||||||||||    
T  28242693 tatgatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattg 28242792  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    |||| || || ||||  |||||||||||||| |||| ||||| | |||| |||||||||||||| ||||||||||||||  | || |||||||| |||||    
T  28242793 atgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgc 28242892  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||| |||||||||||||||    
T  28242893 ttcttcttcattttgcttggacgaacttgtc 28242923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 231
Target Start/End: Original strand, 28181034 - 28181233
Alignment:
Q  32 acactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttcatggaggtgacaaaat 131  Q
    ||||||| ||||||||||| || ||| || | |||||||| |||||||  ||| || | |||||||| ||||| || |||||||| ||||||||  ||||    
T  28181034 acactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaat 28181133  T
Q  132 cacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
     |||  ||||| | |||| |||||||||||||| ||||||||||||||  | || |||||||| |||||||||||||| ||||| |||||||||||||||    
T  28181134 aacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtc 28181233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 28185255 - 28185485
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    ||||| |||||||| || ||||| || | | ||||||| ||| ||||||| || ||| || | |||||||| |||||||  ||| || | |||||||| |    
T  28185255 tatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatgg 28185354  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    |||| || |||||||| ||||||||  |||| |||  ||||| | |||| |||||||||||||| ||||||||||||||  | || |||||||| |||||    
T  28185355 atgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgc 28185454  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||| |||||||||||||||    
T  28185455 ttcttcttcattttgcttggacgaacttgtc 28185485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 27611294 - 27611070
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||| ||| ||||||  |||||   |||||  ||| ||  ||||||||||||||| |    
T  27611294 gtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 27611195  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || ||||   |||| ||  ||||||||| |||||   |||| |||||||| || || |||||||| |||||  | || |||||||||||||| |||||    
T  27611194 atgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttc 27611095  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||||||||||||    
T  27611094 ttcgttttgtttggacgaacttgtc 27611070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 28325370 - 28325600
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgt-gacagtggagtctgtaccttcatt 99  Q
    ||||| |||||||| |||||||| || | | ||||||| ||||||||||| || ||| |||||| || ||| ||| |  || | | || |||||||||||    
T  28325370 tatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattc-gtaccttcatt 28325468  T
Q  100 gatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatg 199  Q
    ||||| |  || |||||  |||||||| |||| ||||  |||| | |||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||    
T  28325469 gatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatg 28325568  T
Q  200 cttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||| ||||| ||||| |||||||||    
T  28325569 cttcttcttccttttgcttggatgaacttgtc 28325600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 27718671 - 27718447
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||| | |||||||  |  |||||||||| ||| ||||||  |||||   |||||  ||| ||  ||||||||||||||| |    
T  27718671 gtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 27718572  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||   |||| |||||||| || || |||||||| |||||  | || |||||||||||||| |||||    
T  27718571 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttc 27718472  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||||||||||||    
T  27718471 ttcgttttgtttggacgaacttgtc 27718447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 231
Target Start/End: Complemental strand, 27338359 - 27338133
Alignment:
Q  5 atgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatga 104  Q
    ||||||||||||||||||||| |||| ||||||  || ||||||||||||||| ||||||  |||||   |||||  ||| ||   ||||||||||||||    
T  27338359 atgtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatga 27338260  T
Q  105 tagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttct 204  Q
     |  || ||| |  |||| ||  ||| ||||| ||||| |||||| |||||||||||||| |||||||| ||||| || || |||   |||||||| |||    
T  27338259 caacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatct 27338160  T
Q  205 tcttcgttttgtttggacgaacttgtc 231  Q
    ||||| ||||| |||||||||||||||    
T  27338159 tcttcattttgcttggacgaacttgtc 27338133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 231
Target Start/End: Complemental strand, 27399099 - 27398873
Alignment:
Q  5 atgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatga 104  Q
    ||||||||||||||||||||| |||| ||||||  || ||||||||||||||| ||||||  |||||   |||||  ||| ||   ||||||||||||||    
T  27399099 atgtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatga 27399000  T
Q  105 tagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttct 204  Q
     |  || ||| |  |||| ||  ||| ||||| ||||| |||||| |||||||||||||| |||||||| ||||| || || |||   |||||||| |||    
T  27398999 caacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatct 27398900  T
Q  205 tcttcgttttgtttggacgaacttgtc 231  Q
    ||||| ||||| |||||||||||||||    
T  27398899 tcttcattttgcttggacgaacttgtc 27398873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 28139526 - 28139660
Alignment:
Q  97 attgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaact 196  Q
    |||||||||||||||||||| ||||||||| ||||  |||  ||||  || |||||||||||||| || ||||||||||| ||  | || || |||||||    
T  28139526 attgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaact 28139625  T
Q  197 atgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||| |||||||||||||| |||||||||||||||    
T  28139626 atgcctcttcttcgttttgcttggacgaacttgtc 28139660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 28226839 - 28227069
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    ||||| |||||||| |||||||| || ||| ||||||| ||||||||||| || ||| ||||||| | ||| ||| | |  ||| |    || ||| |||    
T  28226839 tatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttg 28226938  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    ||||||| |||||||| ||||||||  |||| |||  ||||| | |||| | ||||||||| || ||||||||||||||  | || |||||||| |||||    
T  28226939 atgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgc 28227038  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||| |||||||||||||||    
T  28227039 ttcttcttcattttgcttggacgaacttgtc 28227069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 27593191 - 27593090
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||| ||||| | |||| |||||||||||||| |||||||| |||||  | || |||||||||||||| ||||||||||||||||||||||||||    
T  27593191 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaact 27593092  T
Q  228 tg 229  Q
    ||    
T  27593091 tg 27593090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 26655884 - 26656108
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||||| |||| ||  | ||||||||||||||| ||||||  |||||   ||| |  ||| ||  ||| ||||||||||| |    
T  26655884 gtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgaca 26655983  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || ||||   |||| ||  ||||||||| |||||  || || ||||||||||| ||||||||||| ||||| || || |||  ||||||||| |||||    
T  26655984 atgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttc 26656083  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    ||| |||||||||||||||||||||    
T  26656084 ttcattttgtttggacgaacttgtc 26656108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 26761855 - 26762079
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||||| |||| ||  | ||||||||||||||| ||||||  |||||   ||| |  ||| ||  ||| ||||||||||| |    
T  26761855 gtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgaca 26761954  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || ||||   |||| ||  ||||||||| |||||  || || ||||||||||| ||||||||||| ||||| || || |||  ||||||||| |||||    
T  26761955 atgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttc 26762054  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    ||| |||||||||||||||||||||    
T  26762055 ttcattttgtttggacgaacttgtc 26762079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 26937073 - 26937213
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    |||||||||||||| | |||||| |||||||| ||  ||||||||| ||||| |||||| || |||||||| ||| |||||  ||| ||  | |||||||    
T  26937073 accttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctcta 26937172  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  26937173 tcaactatgccacttcttcattttgtttggacgaacttgtc 26937213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 27725137 - 27724913
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||| ||||||||||||| | |||||||  | ||||||||||| ||| ||||||  |||||   |||||  ||| ||  ||||||||||||||| |    
T  27725137 gtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 27725038  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||   |||| |||||||| || || |||||||| |||||  | || |||||||||||||| | |||    
T  27725037 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattc 27724938  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||||||||||||    
T  27724937 ttcgttttgtttggacgaacttgtc 27724913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 27678962 - 27679065
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||| ||||| | |||| |||||||||||||| |||||||| |||||  | || |||||||||||||| |||||||| |||||||||||||||||    
T  27678962 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaact 27679061  T
Q  228 tgtc 231  Q
    ||||    
T  27679062 tgtc 27679065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 25579696 - 25579838
Alignment:
Q  89 gtaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctc 188  Q
    |||||||| |||||||||  || |||||  |||| ||  ||||||||| ||||| |||||| ||||||||||| || |||||||| ||||| || || ||    
T  25579696 gtaccttctttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttc 25579795  T
Q  189 tatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |  ||||||||| |||||||| |||||||||||||||||||||    
T  25579796 tgccaactatgcatcttcttcattttgtttggacgaacttgtc 25579838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 231
Target Start/End: Original strand, 31284186 - 31284407
Alignment:
Q  10 ttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgataggg 109  Q
    ||||| ||||| ||||| | | ||||||| |||||||| ||||||||| ||||||  |||||   |||||  ||| ||   ||||||||||||||||| |    
T  31284186 ttccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtg 31284285  T
Q  110 agcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttc 209  Q
    | |||||  |||| ||  ||||||||| |||||  | ||| |||||||||||||| |||||||| || ||  | || |||  ||||||||| ||||| ||    
T  31284286 aacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtc 31284385  T
Q  210 gttttgtttggacgaacttgtc 231  Q
    ||||||||||||||||||||||    
T  31284386 gttttgtttggacgaacttgtc 31284407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 26893679 - 26893543
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    ||||||||||||||||  ||||||||| |||||||| ||||| ||| ||||| | |||| || ||||||||||| | ||| | ||||||| |  ||||||    
T  26893679 accttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctcta 26893580  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    |||||||||||||||||   ||||||||||| |||||    
T  26893579 tcaactatgcttcttctatattttgtttggaagaact 26893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 27229127 - 27229347
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||| ||||||||||||| | |||||||  | ||||||||||||||| ||||||  |||||   |||||  ||| ||  ||||||||||||||| |    
T  27229127 gtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 27229226  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||| ||||||||| |||||  ||||| |||||||| || ||  ||||||| ||||| || || |||  ||||||||| |||||    
T  27229227 atgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttc 27229326  T
Q  207 ttcgttttgtttggacgaact 227  Q
    ||| ||||||||| |||||||    
T  27229327 ttcattttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 27698786 - 27698562
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||| ||||||||||||||| | |||||||  | ||||||||||| ||| ||||||  |||||   |||||  ||| ||  ||||||||||||||| |    
T  27698786 gtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 27698687  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||   |||| |||||||| || || |||||||| |||||  | || ||| |||||||||| |||||    
T  27698686 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttc 27698587  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    ||| |||||||||||||||||||||    
T  27698586 ttcattttgtttggacgaacttgtc 27698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 231
Target Start/End: Complemental strand, 28297921 - 28297781
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    |||||||||||||| || |||||| | ||||||||| |||| |||| ||||| | ||||   |||||||||| | ||||||||||||||  | || ||||    
T  28297921 accttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatcta 28297822  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
     ||| |||||||||||||| ||||| |||||||||||||||    
T  28297821 ccaattatgcttcttcttcattttgcttggacgaacttgtc 28297781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 28514152 - 28514292
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    |||||||||||||| || |||||| | ||||||||| |||| |||| ||||| | ||||   |||||||||| | ||||||||||||||  | || ||||    
T  28514152 accttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatcta 28514251  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
     ||| |||||||||||||| ||||| |||||||||||||||    
T  28514252 ccaattatgcttcttcttcattttgcttggacgaacttgtc 28514292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 2184324 - 2184407
Alignment:
Q  148 aaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||||||| |||||||| ||  ||||||| |  ||||||||||||||||| |||||||||||||||||||||    
T  2184324 aaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcattttgtttggacgaacttgtc 2184407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 26142881 - 26142984
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||| ||||| |||||| ||||||||||| || |||||||| ||||| || || |||  ||||||||| |||||||| |||||||||||||||||    
T  26142881 aaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 26142980  T
Q  228 tgtc 231  Q
    ||||    
T  26142981 tgtc 26142984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 27604997 - 27604774
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||| ||||||||||||| | ||||||| || ||||||||||||||| ||||||  |||||   |||||  ||| |   ||||||||||||||| |    
T  27604997 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaa 27604898  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || ||||   |||| ||  ||||||||| | ||| | |||| |||||||| || ||||||||||| |||||  | || |||||||| ||||| |||||    
T  27604897 atgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttc 27604798  T
Q  207 ttcgttttgtttggacgaacttgt 230  Q
    ||| ||||||||||| ||||||||    
T  27604797 ttccttttgtttggatgaacttgt 27604774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 27677785 - 27677682
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||| ||||| | |||| |||||||||||||| |||||||| ||| |  | || |||||||||||||| |||||||| |||||||||||||||||    
T  27677785 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaact 27677686  T
Q  228 tgtc 231  Q
    ||||    
T  27677685 tgtc 27677682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 27706573 - 27706470
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||| ||||| | |||| |||||||||||||| |||||||| |||||  | || ||||||| |||||| |||||||| |||||||||||||||||    
T  27706573 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaact 27706474  T
Q  228 tgtc 231  Q
    ||||    
T  27706473 tgtc 27706470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 25481758 - 25481861
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||| ||||| |||||| ||||||||||| || |||||||  ||||| || || |||  ||||||||| |||||||| |||||||||||||||||    
T  25481758 aaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 25481857  T
Q  228 tgtc 231  Q
    ||||    
T  25481858 tgtc 25481861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 26802337 - 26802560
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||| | ||||||| || |||||||| |||||| ||||||  |||||   |||||  ||| ||  ||||||||||||||| |    
T  26802337 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 26802436  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||   |||| ||||||||||| || || ||||| |||||  | || |||||||||||||| |||||    
T  26802437 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttc 26802536  T
Q  207 ttcgttttgtttggacgaacttgt 230  Q
        ||||| ||||||||||||||    
T  26802537 aaaattttgcttggacgaacttgt 26802560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 26884179 - 26884282
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||| |||||   |||| ||||||||||| || || ||||| |||||||| || |||| ||||||||| |||||||| |||||||||||||||||    
T  26884179 aaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaact 26884278  T
Q  228 tgtc 231  Q
    ||||    
T  26884279 tgtc 26884282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 230
Target Start/End: Original strand, 29825949 - 29826145
Alignment:
Q  34 actcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttcatggaggtgacaaaatca 133  Q
    ||||||| |||||||||||||||| |||||| |||||||  |||||    | |  | |||||||||||||| |  ||||||||  |||| ||| ||||||    
T  29825949 actcgctttggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatca 29826048  T
Q  134 cacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgt 230  Q
    |||  |||| ||| || || ||| |||| || |||||   |||||| |||||||||| ||| |||||||||||||||||||| || || ||||||||    
T  29826049 caccctcacttgtgaaggcaattcaagaatctaggatagccattcctattttctctaccaattatgcttcttcttcgttttgcttagatgaacttgt 29826145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 2184934 - 2185017
Alignment:
Q  148 aaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||| ||||| |||||||| ||  ||||||| |   |||||||||||||||| |||||||||||||||||||||    
T  2184934 aaagccattgaagaatccagaattttcatccctgttttctcaaaggactatgcttcttcttcattttgtttggacgaacttgtc 2185017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 25538556 - 25538659
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||| ||||| |||||| ||||| ||||| || || ||||| ||||| || || |||  ||||||||| |||||||| |||||||||||||||||    
T  25538556 aaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 25538655  T
Q  228 tgtc 231  Q
    ||||    
T  25538656 tgtc 25538659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 28781034 - 28781257
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||||||| ||||||  |||||   |||||  ||| ||   |||||||||||||| |    
T  28781034 gtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 28781133  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||   |||| ||||| ||||| || |||||||| |||||  | || ||||||||||||||  ||||    
T  28781134 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttc 28781233  T
Q  207 ttcgttttgtttggacgaacttgt 230  Q
        ||||| ||||||||||||||    
T  28781234 aaaattttgcttggacgaacttgt 28781257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 26048740 - 26048964
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||| ||||||| | |||||||| |   ||||||||| ||| |||| |  |||||   |||||  ||| | ||||| |||||||||||||    
T  26048740 gtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgata 26048839  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || ||| |  |||| ||  |||||||||    || |||||| ||||| ||||| || |||||||| ||||| || || |||  ||||||||| |||||    
T  26048840 atgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttc 26048939  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    ||| |||||||||||||||||||||    
T  26048940 ttcattttgtttggacgaacttgtc 26048964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 26069909 - 26070133
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||| ||||||| | |||||||| |   ||||||||| ||| |||| |  |||||   |||||  ||| | ||||| |||||||||||||    
T  26069909 gtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgata 26070008  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || ||| |  |||| ||  |||||||||    || |||||| ||||| ||||| || |||||||| ||||| || || |||  ||||||||| |||||    
T  26070009 atgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttc 26070108  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    ||| |||||||||||||||||||||    
T  26070109 ttcattttgtttggacgaacttgtc 26070133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 26646458 - 26646598
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    ||||||||||||||| | || ||| |  |||| ||  ||||||||| |||||   |||| ||||||||||| || |||||||| |||||  | || ||||    
T  26646458 accttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttcta 26646557  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||| ||||||   |||||||||||||||||||||    
T  26646558 tcaactatgcctcttctaaattttgtttggacgaacttgtc 26646598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 26752426 - 26752566
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    ||||||||||||||| | || ||| |  |||| ||  ||||||||| |||||   |||| ||||||||||| || |||||||| |||||  | || ||||    
T  26752426 accttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttcta 26752525  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||| ||||||   |||||||||||||||||||||    
T  26752526 tcaactatgcctcttctaaattttgtttggacgaacttgtc 26752566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 26823879 - 26823959
Alignment:
Q  151 gccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||| |||||||| |||||  | || |||  ||||||||| |||||||| |||||||||||||||||||||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtc 26823959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 26055942 - 26056045
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||  ||||| |||||| ||||| ||||| ||  ||||||| ||||| || || |||  ||||||||| |||||||| |||||||||||||||||    
T  26055942 aaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 26056041  T
Q  228 tgtc 231  Q
    ||||    
T  26056042 tgtc 26056045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 26075912 - 26076015
Alignment:
Q  128 aaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaact 227  Q
    ||||||||  ||||| |||||| ||||| ||||| ||  ||||||| ||||| || || |||  ||||||||| |||||||| |||||||||||||||||    
T  26075912 aaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 26076011  T
Q  228 tgtc 231  Q
    ||||    
T  26076012 tgtc 26076015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 27531489 - 27531266
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||    |||||||| | ||||||||||| ||| ||||||  |||||   |||||  ||| ||| ||||||||||||||| |    
T  27531489 gtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattgatgaca 27531390  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||     || ||||||||| | || |||||||| |||||  | || |||   |||||||| |||||    
T  27531389 atgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaaactatgcatcttc 27531290  T
Q  207 ttcgttttgtttggacgaacttgt 230  Q
    ||| ||||||||||||||||||||    
T  27531289 ttcattttgtttggacgaacttgt 27531266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 26622955 - 26623095
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    ||||||||||||||| | || |||||  |||| ||| |||||| || ||||| || ||| || || |||||||| |||||||| |||||  | || |||     
T  26622955 accttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctc 26623054  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
     ||||||||| | |||||| ||||||||||| |||||||||    
T  26623055 ccaactatgcatattcttcattttgtttggatgaacttgtc 26623095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 26728933 - 26729073
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    ||||||||||||||| | || |||||  |||| ||| |||||| || ||||| || ||| || || |||||||| |||||||| |||||  | || |||     
T  26728933 accttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctc 26729032  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
     ||||||||| | |||||| ||||||||||| |||||||||    
T  26729033 ccaactatgcatattcttcattttgtttggatgaacttgtc 26729073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 28786173 - 28786363
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||| ||| ||||||  |||||   |||||  ||| ||   |||||||||||||| |    
T  28786173 gtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 28786272  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaacta 197  Q
      || |||||  |||| ||  ||||||||| |||||   |||| ||||| ||||| || |||||||| |||||  | || |||||||||||    
T  28786273 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 28786363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 28792294 - 28792484
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||| ||| ||||||  |||||   |||||  ||| ||   |||||||||||||| |    
T  28792294 gtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 28792393  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaacta 197  Q
      || |||||  |||| ||  ||||||||| |||||   |||| ||||| ||||| || |||||||| |||||  | || |||||||||||    
T  28792394 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 28792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 26975134 - 26975171
Alignment:
Q  194 actatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||| |||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtc 26975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 26861655 - 26861735
Alignment:
Q  151 gccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||| || |||||||||||  | || |||  ||||||||| ||||| || ||||||||||| |||||||||    
T  26861655 gccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtc 26861735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 26617263 - 26617350
Alignment:
Q  49 accggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttcatggaggtgacaaaatcacac 136  Q
    ||||||||| |||| | |||||| |||||||  |||||| | |||||||||||||| | |||||||||  |||||||  |||||||||    
T  26617263 accggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacac 26617350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 26723191 - 26723278
Alignment:
Q  49 accggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttcatggaggtgacaaaatcacac 136  Q
    ||||||||| |||| | |||||| |||||||  |||||| | |||||||||||||| | |||||||||  |||||||  |||||||||    
T  26723191 accggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacac 26723278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 26848741 - 26848779
Alignment:
Q  193 aactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  26848741 aactatgccacttcttcgttttgtttggacgaacttgtc 26848779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 27214498 - 27214536
Alignment:
Q  193 aactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  27214498 aactatgctacttcttcattttgtttggacgaacttgtc 27214536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 27234730 - 27234692
Alignment:
Q  193 aactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  27234730 aactatgctacttcttcattttgtttggacgaacttgtc 27234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 25071741 - 25071778
Alignment:
Q  194 actatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtc 25071778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 27427751 - 27427674
Alignment:
Q  154 attgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||| ||||||||||| ||||| || || |||  ||||||||| |||||||| | ||||||||||  |||||||    
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtc 27427674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 27214348 - 27214440
Alignment:
Q  43 ggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttcatggaggtgacaaaatcaca 135  Q
    ||||| ||||| ||| |||| | |||||| |||||||  ||| || | |||||||||||||| | |||||||||  |||||||| ||||||||    
T  27214348 ggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 27234880 - 27234788
Alignment:
Q  43 ggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttcatggaggtgacaaaatcaca 135  Q
    ||||| ||||| ||| |||| | |||||| |||||||  ||| || | |||||||||||||| | |||||||||  |||||||| ||||||||    
T  27234880 ggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 3279592 - 3279807
Alignment:
Q  16 agttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttc 115  Q
    ||||||||||||| | ||||||||||||||||||| || ||| |||| |||||| || ||||| ||||| |||| |||||||||||||||||||||||||    
T  3279592 agttttaggggcactgacactcgctatggttttactggaaatctctatagagctttaagtgacggtggattctgcaccttcattgatgatagggagcttc 3279691  T
Q  116 atggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttg 215  Q
    ||||||||||  ||||||||||||||| |||||| ||||| |||||||||| |||||| |||||  | ||||||||||||||||||||||||   |||||    
T  3279692 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 3279791  T
Q  216 tttggacgaacttgtc 231  Q
    ||||||||||||||||    
T  3279792 tttggacgaacttgtc 3279807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 17993789 - 17993752
Alignment:
Q  194 actatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  17993789 actatgcttcttcttcattttgtttagacgaacttgtc 17993752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 231
Target Start/End: Complemental strand, 58549 - 58350
Alignment:
Q  32 acactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttcatggaggtgacaaaat 131  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||||||  ||| || | |||||||| ||||| || |||||||| ||||||||| ||||    
T  58549 acactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaat 58450  T
Q  132 cacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
     |||| ||||| | |||| |||||| ||||||| ||||||||||||||  | || ||||||||||||||||||||||| ||||| ||| |||||||||||    
T  58449 aacaccatcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtc 58350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 87; Significance: 8e-42; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 34614 - 34844
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    ||||| |||||||| |||||||| || | | |||||||||||||||||||||  ||| |||| |||||||| ||| |||  ||| ||   ||||||||||    
T  34614 tatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattg 34713  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    |||| ||||||||||| ||||| ||  |||| |||| ||||| | |||| |||||||||||||| ||||||||||||||  | || |||||||| |||||    
T  34714 atgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgc 34813  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||| |||||||||||||||    
T  34814 ttcttcttcattttgcttggacgaacttgtc 34844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 42855 - 43085
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    |||||||| ||||| |||||||| || | | ||||||| ||||||||||| || ||| |||||| || ||| ||| | |  ||| |  | ||||||||||    
T  42855 tatgatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattg 42954  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    |||| || || ||||  |||||||||||||| |||| ||||| | |||| |||||||||||||| ||||||||||||||  | || |||||||| |||||    
T  42955 atgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgc 43054  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||| |||||||||||||||    
T  43055 ttcttcttcattttgcttggacgaacttgtc 43085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 116685 - 116915
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgt-gacagtggagtctgtaccttcatt 99  Q
    ||||| |||||||| |||||||| || | | ||||||| ||||||||||| || ||| |||||| || ||| ||| |  || | | || |||||||||||    
T  116685 tatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattc-gtaccttcatt 116783  T
Q  100 gatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatg 199  Q
    ||||| |  || |||||  |||||||| |||| ||||  |||| | |||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||    
T  116784 gatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatg 116883  T
Q  200 cttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||| ||||| ||||| |||||||||    
T  116884 cttcttcttccttttgcttggatgaacttgtc 116915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27337 - 27567
Alignment:
Q  1 tatgatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattg 100  Q
    ||||| |||||||| |||||||| || ||| ||||||| ||||||||||| || ||| ||||||| | ||| ||| | |  ||| |    || ||| |||    
T  27337 tatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttg 27436  T
Q  101 atgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgc 200  Q
    ||||||| |||||||| ||||||||  |||| |||  ||||| | |||| | ||||||||| || ||||||||||||||  | || |||||||| |||||    
T  27437 atgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgc 27536  T
Q  201 ttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||||||| ||||| |||||||||||||||    
T  27537 ttcttcttcattttgcttggacgaacttgtc 27567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 14647 - 14424
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||| ||||||||||||||| | |||||||  | ||||||||||| ||| ||||||  |||||   |||||  ||| ||  ||||||||||||||| |    
T  14647 gtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 14548  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||   |||| |||||||| || || |||||||| |||||  | || |||||||||||||| | |||    
T  14547 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttc 14449  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||||||||||||    
T  14448 ttcgttttgtttggacgaacttgtc 14424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 3714 - 3489
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||| ||||||||||||| | |||||||  | ||||||||||| ||| ||||||  |||||   |||||  ||| ||  ||||||||||||||| |    
T  3714 gtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 3615  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaac-tatgcttctt 205  Q
      || |||||  |||| ||  ||||||||| |||||   |||| |||||||| || || |||||||| |||||  | || ||||||||| ||||| ||||    
T  3614 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctctt 3515  T
Q  206 cttcgttttgtttggacgaacttgtc 231  Q
    |||| |||||||||||||||||||||    
T  3514 cttcattttgtttggacgaacttgtc 3489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 18731783 - 18731559
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    ||||||||||| || ||||||| | |||||||  | |||||||| ||| || |||||||||||||   |||||  ||| ||   ||||||||||||||      
T  18731783 gtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacaccttcattgatgacc 18731684  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
    | || || ||  |||| ||  |||||| || |||||  | ||| |||||||||||||| ||||| ||||||||  | || |||||||||||||| |||||    
T  18731683 gtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttc 18731584  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    ||| |||||||||||||||||||||    
T  18731583 ttcattttgtttggacgaacttgtc 18731559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 18679702 - 18679622
Alignment:
Q  151 gccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||| ||||| ||||||||  | || |||||||||||||| |||||||| |||||||||||||||||||||    
T  18679702 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtc 18679622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 18699535 - 18699456
Alignment:
Q  151 gccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgt 230  Q
    |||||||||||||| ||||| ||||||||  | || |||||||||||||| |||||||| ||||||||||||||||||||    
T  18699535 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgt 18699456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 18724220 - 18724140
Alignment:
Q  151 gccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||| ||||| ||||||||  | || |||||||||||||| |||||||| ||||||||| |||||||||||    
T  18724220 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtc 18724140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 231
Target Start/End: Complemental strand, 5091162 - 5091022
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    |||||||||||||| || ||||||||  |||| ||| |||| ||||  |||| | |||| |||||| |||| || | |||| |||||    |||||||||    
T  5091162 accttcattgatgacagagagcttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctcta 5091063  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
     | ||||||||||||||||||||||||| || |||||||||    
T  5091062 accactatgcttcttcttcgttttgtttagatgaacttgtc 5091022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 18655612 - 18655532
Alignment:
Q  151 gccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||| ||||||| ||||| || |||||  | || |||||||||||||| |||||||| |||||||||||||||||||||    
T  18655612 gccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtc 18655532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 17989185 - 17989108
Alignment:
Q  154 attgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||| ||||||||||| ||||| || || |||  ||||||||| |||||||| | ||||||||||  |||||||    
T  17989185 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtc 17989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 18073804 - 18073881
Alignment:
Q  154 attgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||| ||||||||||| ||||| || || |||  ||||||||| |||||||| | ||||||||||  |||||||    
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtc 18073881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 231
Target Start/End: Complemental strand, 268552 - 268412
Alignment:
Q  91 accttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctcta 190  Q
    ||||||||||||||| | || |||||  |||| ||  |||||| || |||||  | ||| |||||||||||||| |||||||| |||||  | || ||||    
T  268552 accttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttcta 268453  T
Q  191 tcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  268452 tcaactatgcctcttcttcattttgtttggacgaacttgtc 268412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 28164461 - 28164417
Alignment:
Q  187 tctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    
T  28164461 tctatcaactatgcctcttcttcattttgtttggacgaacttgtc 28164417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 28127814 - 28127735
Alignment:
Q  151 gccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgt 230  Q
    ||||||||||| || || ||||| |||||  | || |||| ||||||||| |||||||| ||||||||||||||||||||    
T  28127814 gccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgt 28127735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 4963 - 4739
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||| ||| ||||||  |||||   |||||  ||| ||   |||||||||||||| |    
T  4963 gtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 4864  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| ||| |    ||| |||||||| || || |||||||| |||||  | || ||||||  |||||| | |||    
T  4863 atgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttc 4764  T
Q  207 ttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||||||||||||||||    
T  4763 ttcgttttgtttggacgaacttgtc 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 13924 - 13701
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||||||| ||||||  |||||   |||||  ||| ||   |||||||||||||| |    
T  13924 gtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 13825  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||   |||| ||||| ||||| || |||||||| |||||  | || ||||||||||| ||  ||||    
T  13824 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 13725  T
Q  207 ttcgttttgtttggacgaacttgt 230  Q
        ||||| ||||||||||||||    
T  13724 aaaattttgcttggacgaacttgt 13701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 29273916 - 29273838
Alignment:
Q  153 cattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||||||| || ||||| |||||  | || |||||||||||||| |||||||| |||||||||||||||||||||    
T  29273916 cattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtc 29273838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 31903743 - 31903810
Alignment:
Q  4 gatgtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctct 71  Q
    |||||||||||||| ||||| ||| |  ||||||||||||||||||| || ||| |||||| ||||||    
T  31903743 gatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctct 31903810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 14794613 - 14794689
Alignment:
Q  154 attgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgt 230  Q
    ||||||||||||||||||||||| ||| |||| ||    || ||||| |||||||| ||||| || |||||||||||    
T  14794613 attgaagagtccaggattttcatcccagttttatcagaaaattatgcatcttcttcattttgcttagacgaacttgt 14794689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 14801883 - 14801959
Alignment:
Q  154 attgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgt 230  Q
    ||||||||||||||||||||||| ||| |||| ||    || ||||| |||||||| ||||| || |||||||||||    
T  14801883 attgaagagtccaggattttcatcccagttttatcagaaaattatgcatcttcttcattttgcttagacgaacttgt 14801959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 231
Target Start/End: Original strand, 16688931 - 16689130
Alignment:
Q  32 acactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgatagggagcttcatggaggtgacaaaat 131  Q
    ||||||||| |  |||||| || ||| | |||| ||||||||||||||  ||| || ||  |||||||||||| | ||| |||||  |||||||||||||    
T  16688931 acactcgctttcattttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaat 16689030  T
Q  132 cacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    ||||| ||||| | |||| || |||||||| || ||||||   || ||  | || ||||  |||||||| | ||| |||||||||||||| |||||||||    
T  16689031 cacaccatcacttatcaaggcaattgaagactcaaggattgcaatccccgtgttttctaagaactatgcattttcctcgttttgtttggatgaacttgtc 16689130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 7420 - 7643
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||| ||||||||||||| | |||||||| | ||||||||||||||| ||||||  |||||   |||||  ||| ||   |||||||||||||| |    
T  7420 gtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 7519  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaactatgcttcttc 206  Q
      || |||||  |||| ||  ||||||||| |||||   |||| ||||| ||||| || |||||||| |||||  | || ||||||||||| ||  ||||    
T  7520 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 7619  T
Q  207 ttcgttttgtttggacgaacttgt 230  Q
        ||||| ||||||||||||||    
T  7620 aaaattttgcttggacgaacttgt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 209 - 19
Alignment:
Q  7 gtgttcctcagttttaggggcattcacactcgctatggttttaccggcaatatctacagagctctatgtgacagtggagtctgtaccttcattgatgata 106  Q
    |||||||| ||||||||||||| | |||||||| | ||||||||||||||| ||||||  |||||   |||||  ||| ||   |||||||||||||| |    
T  209 gtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgaca 110  T
Q  107 gggagcttcatggaggtgacaaaatcacacaatcacctgtcaaagccattgaagagtccaggattttcattccaattttctctatcaacta 197  Q
      || |||||  |||| ||  ||||||||| |||||   |||| ||||| ||||| || |||||||| |||||  | || |||||||||||    
T  109 atgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 59612 - 59689
Alignment:
Q  154 attgaagagtccaggattttcattccaattttctctatcaactatgcttcttcttcgttttgtttggacgaacttgtc 231  Q
    |||||||| ||||||||||| ||||| || || |||  ||||||||| |||||||| | ||||||||||  |||||||    
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtc 59689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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