View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16481_low_8 (Length: 422)

Name: NF16481_low_8
Description: NF16481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16481_low_8
NF16481_low_8
[»] chr6 (71 HSPs)
chr6 (186-404)||(26142663-26142881)
chr6 (186-404)||(25538338-25538556)
chr6 (186-404)||(26048643-26048861)
chr6 (186-404)||(26069812-26070030)
chr6 (186-404)||(25481540-25481758)
chr6 (186-404)||(26055724-26055942)
chr6 (186-404)||(26075694-26075912)
chr6 (186-405)||(25579514-25579735)
chr6 (18-185)||(26144718-26144885)
chr6 (18-188)||(25484906-25485079)
chr6 (19-185)||(25546831-25546997)
chr6 (20-185)||(25512740-25512905)
chr6 (18-188)||(25581569-25581739)
chr6 (18-185)||(26057770-26057937)
chr6 (18-185)||(26077740-26077907)
chr6 (186-308)||(27718550-27718672)
chr6 (186-308)||(26655883-26656005)
chr6 (186-308)||(26761854-26761976)
chr6 (186-308)||(26802336-26802458)
chr6 (186-308)||(27611173-27611295)
chr6 (31-137)||(27602869-27602975)
chr6 (186-308)||(27604876-27604998)
chr6 (186-308)||(27698665-27698787)
chr6 (186-308)||(27725016-27725138)
chr6 (186-308)||(28781033-28781155)
chr6 (186-308)||(28786172-28786294)
chr6 (186-308)||(28792293-28792415)
chr6 (311-387)||(27605040-27605116)
chr6 (186-308)||(27531368-27531490)
chr6 (311-387)||(27718708-27718784)
chr6 (186-304)||(26861514-26861632)
chr6 (186-307)||(27338236-27338357)
chr6 (186-307)||(27398976-27399097)
chr6 (311-387)||(26655771-26655847)
chr6 (311-387)||(26761742-26761818)
chr6 (32-116)||(26850591-26850675)
chr6 (311-387)||(28780921-28780997)
chr6 (311-387)||(28786060-28786136)
chr6 (319-386)||(27611339-27611406)
chr6 (311-385)||(27725174-27725248)
chr6 (35-116)||(26961005-26961086)
chr6 (311-384)||(28792184-28792257)
chr6 (32-116)||(26648366-26648450)
chr6 (32-116)||(26754334-26754418)
chr6 (311-387)||(26823628-26823704)
chr6 (311-387)||(27698823-27698898)
chr6 (186-304)||(26646377-26646495)
chr6 (186-304)||(26752345-26752463)
chr6 (87-133)||(26825732-26825778)
chr6 (35-116)||(26979322-26979406)
chr6 (80-133)||(26813410-26813463)
chr6 (311-379)||(31284078-31284146)
chr6 (186-304)||(27593191-27593309)
chr6 (186-304)||(27678844-27678962)
chr6 (186-304)||(31284186-31284304)
chr6 (80-113)||(26625160-26625193)
chr6 (80-113)||(26657908-26657941)
chr6 (80-113)||(26731137-26731170)
chr6 (80-113)||(26763879-26763912)
chr6 (80-133)||(26863510-26863563)
chr6 (311-387)||(27229016-27229090)
chr6 (84-116)||(25075801-25075833)
chr6 (228-308)||(26622870-26622950)
chr6 (228-308)||(26728848-26728928)
chr6 (80-116)||(26886003-26886039)
chr6 (80-116)||(27609333-27609369)
chr6 (228-304)||(27677827-27677903)
chr6 (311-367)||(27678748-27678804)
chr6 (80-116)||(27680895-27680931)
chr6 (80-116)||(27696802-27696838)
chr6 (80-116)||(27716712-27716748)
[»] scaffold0349 (5 HSPs)
scaffold0349 (186-308)||(3593-3715)
scaffold0349 (186-308)||(14526-14648)
scaffold0349 (311-387)||(8130-8206)
scaffold0349 (311-385)||(3751-3825)
scaffold0349 (311-387)||(14684-14759)
[»] scaffold0277 (4 HSPs)
scaffold0277 (186-308)||(4842-4964)
scaffold0277 (186-308)||(13803-13925)
scaffold0277 (311-387)||(13961-14037)
scaffold0277 (311-384)||(5000-5073)
[»] scaffold1254 (2 HSPs)
scaffold1254 (186-308)||(88-210)
scaffold1254 (314-367)||(249-302)
[»] scaffold0419 (2 HSPs)
scaffold0419 (186-308)||(7419-7541)
scaffold0419 (314-367)||(7327-7380)
[»] chr2 (1 HSPs)
chr2 (32-133)||(17991376-17991477)
[»] chr4 (14 HSPs)
chr4 (228-308)||(18724285-18724365)
chr4 (311-382)||(18699716-18699787)
chr4 (242-308)||(18679781-18679847)
chr4 (87-133)||(18687897-18687943)
chr4 (87-133)||(18729779-18729825)
chr4 (80-133)||(18697678-18697731)
chr4 (311-382)||(18655793-18655864)
chr4 (311-382)||(18679883-18679954)
chr4 (311-382)||(18731820-18731891)
chr4 (87-133)||(18653761-18653807)
chr4 (87-133)||(18722357-18722403)
chr4 (80-133)||(18677836-18677889)
chr4 (228-308)||(18655677-18655757)
chr4 (276-308)||(18731752-18731784)
[»] chr1 (4 HSPs)
chr1 (189-308)||(28164523-28164642)
chr1 (80-116)||(266568-266604)
chr1 (311-340)||(268673-268702)
chr1 (276-308)||(28127928-28127960)


Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-103; HSPs: 71)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 186 - 404
Target Start/End: Complemental strand, 26142881 - 26142663
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26142881 tcatctcctctttcaagatcattatcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggtaaatttgttgcgagtgtcac 26142782  T
Q  286 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26142781 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatatgaatg 26142682  T
Q  386 agcaattggtgtggtctgt 404  Q
    || |||| |||||||||||    
T  26142681 agtaatttgtgtggtctgt 26142663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 186 - 404
Target Start/End: Complemental strand, 25538556 - 25538338
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25538556 tcatctcctctttcaagatcattatcatctatgaaagtactaattcccttgtcaacaagagccttatagagattaccggtaaatttgttgcgagtgtcac 25538457  T
Q  286 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25538456 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaattgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 25538357  T
Q  386 agcaattggtgtggtctgt 404  Q
    |  |||| |||||||||||    
T  25538356 attaatttgtgtggtctgt 25538338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 186 - 404
Target Start/End: Complemental strand, 26048861 - 26048643
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  26048861 tcatctcctctttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagattaccggtaaaattgttgcgagtgtcac 26048762  T
Q  286 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26048761 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatatgaatg 26048662  T
Q  386 agcaattggtgtggtctgt 404  Q
    || |||| |||||||||||    
T  26048661 agtaatttgtgtggtctgt 26048643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 186 - 404
Target Start/End: Complemental strand, 26070030 - 26069812
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  26070030 tcatctcctctttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagattaccggtaaaattgttgcgagtgtcac 26069931  T
Q  286 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26069930 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatatgaatg 26069831  T
Q  386 agcaattggtgtggtctgt 404  Q
    || |||| |||||||||||    
T  26069830 agtaatttgtgtggtctgt 26069812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 186 - 404
Target Start/End: Complemental strand, 25481758 - 25481540
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25481758 tcatctcctctttgaagatcattttcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 25481659  T
Q  286 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  25481658 tgcccctgaaattgaggaacactctggaaggtgattgcatagccatgagaattgaaagaatttggatgaaaaaaaactttgaaaatggagaatatgaatg 25481559  T
Q  386 agcaattggtgtggtctgt 404  Q
    || |||| |||||||||||    
T  25481558 agtaatttgtgtggtctgt 25481540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 186 - 404
Target Start/End: Complemental strand, 26055942 - 26055724
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26055942 tcatctcctctttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 26055843  T
Q  286 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26055842 tgcccctgaaaatgaggaacactcaggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatatgaatg 26055743  T
Q  386 agcaattggtgtggtctgt 404  Q
    || |||| |||||||||||    
T  26055742 agtaatttgtgtggtctgt 26055724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 186 - 404
Target Start/End: Complemental strand, 26075912 - 26075694
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26075912 tcatctcctctttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 26075813  T
Q  286 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26075812 tgcccctgaaattgaggaacactctggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatatgaatg 26075713  T
Q  386 agcaattggtgtggtctgt 404  Q
    || |||| |||||||||||    
T  26075712 agtaatttgtgtggtctgt 26075694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 186 - 405
Target Start/End: Complemental strand, 25579735 - 25579514
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25579735 tcatctcctctttgaagatcattatcatcaaagaaggtacgaattcccttgtcaacaagagccttatagagattaccggtaaaagtgttgcgagtgtcac 25579636  T
Q  286 tgcccctgaaactgaggaacactcgggaaggtgattgcatagccatgagaactgaaagaatttggatga--aaaaagactttgaaaatggagaatatgaa 383  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||||||||    
T  25579635 tgcctctgaaactgaggaacactcgggaaggtgattgcatagccatgagaattgaaagaatttggatgaataaaaaaactttgaaaatggagaatatgaa 25579536  T
Q  384 tgagcaattggtgtggtctgtg 405  Q
    |||| |||  ||||||||||||    
T  25579535 tgagtaatgtgtgtggtctgtg 25579514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 26144885 - 26144718
Alignment:
Q  18 atccattcccaatatctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgc 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26144885 atccatttccaatatctcaaactacttggaagatacccaggaccccttgaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgc 26144786  T
Q  118 aagccattccattccactctgtttctcttgccgttgagtcaaattttaaatatatcatttcaatattc 185  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26144785 aagccattccatcccactctgtttctcttgccgttgagtcaaattctaaatatatcatttcaatattc 26144718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 25485079 - 25484906
Alignment:
Q  18 atccattcccaatatctcaaactacttggaagatacccaggaccctcagaaaagt---tagcatattcaatgataagtgttttgagatttgtcatcttct 114  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||   || ||| |||||||||||||||||||||||||||||||||||    
T  25485079 atccatttccaatatctcaaactacttggaagatgcccaggacccccagaaaagtaattaccatcttcaatgataagtgttttgagatttgtcatcttct 25484980  T
Q  115 tgcaagccattccattccactctgtttctcttgccgttgagtcaaattttaaatatatcatttcaatattctca 188  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25484979 tgcaagccattccatcccactctgtttctcttgccgttgggtcaaattttaaatatatcatttcaatattctca 25484906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 25546997 - 25546831
Alignment:
Q  19 tccattcccaatatctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||  ||  ||||||||||||||||||||||||||||||||||||||    
T  25546997 tccatttccaatatctcaaactacttggaagatacccaggacccccagaaaacttataatcatcaatgataagtgttttgagatttgtcatcttcttgca 25546898  T
Q  119 agccattccattccactctgtttctcttgccgttgagtcaaattttaaatatatcatttcaatattc 185  Q
    |||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25546897 agccattctatcccactctgtttctcttgccgttgagtcatattttaaatatatcatttcaatattc 25546831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 25512905 - 25512740
Alignment:
Q  20 ccattcccaatatctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgcaa 119  Q
    ||||| |||||||||||||||||||||||||||||||||| || |||||||  ||  || ||||||||||||||||||||||||||||||||||||||||    
T  25512905 ccatttccaatatctcaaactacttggaagatacccaggatccccagaaaacgtataatcttcaatgataagtgttttgagatttgtcatcttcttgcaa 25512806  T
Q  120 gccattccattccactctgtttctcttgccgttgagtcaaattttaaatatatcatttcaatattc 185  Q
    ||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  25512805 gccattctatcccactctgtttttcttgccgttgagtcagattttaaatatatcatttcaatattc 25512740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 25581739 - 25581569
Alignment:
Q  18 atccattcccaatatctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgc 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||  ||  |||||||||||||||||||||||||||||||| |||     
T  25581739 atccattccaaatatctcaaactacttggaagatacccaggacccccagaaaacttataatcatcaatgataagtgttttgagatttgtcatcttattga 25581640  T
Q  118 aagccattccattccactctgtttctcttgccgttgagtcaaattttaaatatatcatttcaatattctca 188  Q
    |||||||||||| |||||||||||||||||||||| || || |||| | ||||||||||||||||||||||    
T  25581639 aagccattccatcccactctgtttctcttgccgttaagccatatttgagatatatcatttcaatattctca 25581569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 26057937 - 26057770
Alignment:
Q  18 atccattcccaatatctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgc 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||   ||||||||| ||| || |||||||||||||||||||||||||||||||| ||    
T  26057937 atccatttccaatatctcaaactacttggaagatacccaggaccccttgaaaagttaccatctttaatgataagtgttttgagatttgtcatcttctcgc 26057838  T
Q  118 aagccattccattccactctgtttctcttgccgttgagtcaaattttaaatatatcatttcaatattc 185  Q
    |||||||||||| |||||||||||||||||||||  || || |||| | |||||||||||||||||||    
T  26057837 aagccattccatcccactctgtttctcttgccgtgaaggcatatttgagatatatcatttcaatattc 26057770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 26077907 - 26077740
Alignment:
Q  18 atccattcccaatatctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgc 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||   ||||||||| ||| || |||||||||||||||||||||||||||||||| ||    
T  26077907 atccatttccaatatctcaaactacttggaagatacccaggaccccttgaaaagttaccatctttaatgataagtgttttgagatttgtcatcttctcgc 26077808  T
Q  118 aagccattccattccactctgtttctcttgccgttgagtcaaattttaaatatatcatttcaatattc 185  Q
    |||||||||||| |||||||||||||||||||||  || || |||| | |||||||||||||||||||    
T  26077807 aagccattccatcccactctgtttctcttgccgtgaaggcatatttgagatatatcatttcaatattc 26077740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 27718550 - 27718672
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||| | |||||||| |||  ||||||||| |||||||| ||||||||| |||  |||||||||     
T  27718550 tcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaactgtgccgagtgtcag 27718649  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  27718650 tgcccctaaaactgaggaacact 27718672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 26656005 - 26655883
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    |||||||||||   ||||||||| ||||| ||||||||| | ||||||||||||| ||||||||| |||||||| |||||||||  ||  || ||||||     
T  26656005 tcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaaccgtgccgggtgtcaa 26655906  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  26655905 tgcccctaaaactgaggaacact 26655883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 26761976 - 26761854
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    |||||||||||   ||||||||| ||||| ||||||||| | ||||||||||||| ||||||||| |||||||| |||||||||  ||  || ||||||     
T  26761976 tcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaaccgtgccgggtgtcaa 26761877  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  26761876 tgcccctaaaactgaggaacact 26761854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 26802458 - 26802336
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||| | |||||||| |||| ||||||||| |||||||| || ||||||  ||  |||||||||     
T  26802458 tcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcaataagagccttgtagagattgcccgtaaaaccgtaccgagtgtcag 26802359  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  26802358 tgcccctaaaactgaggaacact 26802336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 27611173 - 27611295
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||  ||||||||| ||||| ||||| ||| | |||||||| |||  ||||||||| |||||||| |||||||||  || ||||||||||     
T  27611173 tcatctcctcttggaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcag 27611272  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  27611273 tgcccctaaaactgaggaacact 27611295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 27602869 - 27602975
Alignment:
Q  31 atctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgcaagccattccatt 130  Q
    ||||||||||||||||||||||  |||||||   |||||| | | ||| ||||||||||||||||||||||||||||||||||||    ||| |||||||    
T  27602869 atctcaaactacttggaagatagtcaggacctctagaaaactgaccattttcaatgataagtgttttgagatttgtcatcttcttcatggcctttccatt 27602968  T
Q  131 ccactct 137  Q
    |||||||    
T  27602969 ccactct 27602975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 27604876 - 27604998
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||  ||||||||| ||||| ||||| ||| |||||||||| |||  ||||||||| |||||||| |||||||||  ||  |||||||||     
T  27604876 tcatctcctcttcgaagatcattttcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtatcgagtgtcag 27604975  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| ||||| |||||||||    
T  27604976 tgcccctaaaactaaggaacact 27604998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 27698665 - 27698787
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||| | |||||||| |||  ||||||||| |||||||| |||||||||  ||  |||||||||     
T  27698665 tcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcag 27698764  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| ||||||| |||||||    
T  27698765 tgcccctaaaactgatgaacact 27698787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 27725016 - 27725138
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||| | |||||||| |||  ||||||||| |||||||| |||||||||  ||  |||||||||     
T  27725016 tcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcag 27725115  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| ||||| |||||||||    
T  27725116 tgcccctaaaactaaggaacact 27725138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 28781155 - 28781033
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||    |||||||| |||  ||||||||| |||||||| |||||||||  || ||||||||||     
T  28781155 tcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcag 28781056  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  28781055 tgcccctaaaactgaggaacact 28781033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 28786294 - 28786172
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||    |||||||| |||  ||||||||| |||||||| |||||||||  || ||||||||||     
T  28786294 tcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcag 28786195  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  28786194 tgcccctaaaactgaggaacact 28786172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 28792415 - 28792293
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||    |||||||| |||  ||||||||| |||||||| |||||||||  || ||||||||||     
T  28792415 tcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcag 28792316  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  28792315 tgcccctaaaactgaggaacact 28792293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 27605040 - 27605116
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    ||||||| |||||||||||||||||| ||| |||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  27605040 ggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaaagagtttgagaatgcagaatatgaatgag 27605116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 27531368 - 27531490
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| |||   |||||||| |||  ||||||||| |||||||| |||||||||  || |||||||||      
T  27531368 tcatctcctctttgaagatcattgtcatcaatgaaggtatagattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtccg 27531467  T
Q  286 tgcccctgaaactgaggaacact 308  Q
     |||||| |||||||||||||||    
T  27531468 cgcccctaaaactgaggaacact 27531490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 27718708 - 27718784
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    |||||||||||| ||||||||||||| ||| |||| | ||||||||||||| ||||| |||| ||||||||||||||    
T  27718708 ggaaggtgattgtatagccatgagaattgagagaaataggatgaaaaaagagtttgagaatgcagaatatgaatgag 27718784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 26861632 - 26861514
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||| ||||||| ||| |||  |||||||||||| ||  |||||||||| |||  ||||||||| ||||||||||||||||||   |  ||||||||||    
T  26861632 tcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattaccggtaaaaccataccgagtgtcac 26861533  T
Q  286 tgcccctgaaactgaggaa 304  Q
    | || ||||||||||||||    
T  26861532 ttcctctgaaactgaggaa 26861514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 307
Target Start/End: Original strand, 27338236 - 27338357
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    |||||||||||||||||||| || ||||| ||||| ||    |||||||| |||| ||||||||| |||||||| |||||||||  ||   ||||||||     
T  27338236 tcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccgtaaagagtgtcaa 27338335  T
Q  286 tgcccctgaaactgaggaacac 307  Q
    || |||| ||||||||||||||    
T  27338336 tgtccctaaaactgaggaacac 27338357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 307
Target Start/End: Original strand, 27398976 - 27399097
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    |||||||||||||||||||| || ||||| ||||| ||    |||||||| |||| ||||||||| |||||||| |||||||||  ||   ||||||||     
T  27398976 tcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccgtaaagagtgtcaa 27399075  T
Q  286 tgcccctgaaactgaggaacac 307  Q
    || |||| ||||||||||||||    
T  27399076 tgtccctaaaactgaggaacac 27399097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 26655847 - 26655771
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    |||||||||||| ||||||||||||| ||| ||||  |||||||||||||| ||||  |||| ||||||||||||||    
T  26655847 ggaaggtgattgtatagccatgagaattgagagaaaatggatgaaaaaagagtttgggaatgcagaatatgaatgag 26655771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 26761818 - 26761742
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    |||||||||||| ||||||||||||| ||| ||||  |||||||||||||| ||||  |||| ||||||||||||||    
T  26761818 ggaaggtgattgtatagccatgagaattgagagaaaatggatgaaaaaagagtttgggaatgcagaatatgaatgag 26761742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 26850675 - 26850591
Alignment:
Q  32 tctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    |||||||||||| |||||||||   ||||| | |||||| ||  ||| ||||| |||||||||||||||||||||||||||||||    
T  26850675 tctcaaactactcggaagatacttgggacctttagaaaaattgtcatcttcaacgataagtgttttgagatttgtcatcttcttg 26850591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 28780997 - 28780921
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    ||||||| ||||||||||||||| || ||| |||| ||||||||||||||| ||||| |||  ||||||||||||||    
T  28780997 ggaaggtaattgcatagccatgataattgagagaaattggatgaaaaaagagtttgagaattcagaatatgaatgag 28780921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 28786136 - 28786060
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    |||||||||||| |||||||| |||| ||| |||| ||||||||||||||| ||||| |||  ||||||||||||||    
T  28786136 ggaaggtgattgtatagccataagaattgagagaaattggatgaaaaaagagtttgagaattcagaatatgaatgag 28786060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 27611339 - 27611406
Alignment:
Q  319 attgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatga 386  Q
    ||||||||||||||| || ||| |||| ||||||||||||||| ||||| |||| |||||||||||||    
T  27611339 attgcatagccatgaaaattgagagaaattggatgaaaaaagagtttgagaatgcagaatatgaatga 27611406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 27725174 - 27725248
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    |||||||||||| |||||||||| || ||| |||| | ||||||||||||| ||||| |||| ||||||||||||    
T  27725174 ggaaggtgattgtatagccatgacaattgagagaaataggatgaaaaaagagtttgagaatgcagaatatgaatg 27725248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 26961086 - 26961005
Alignment:
Q  35 caaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    |||||||||||||||||||   ||||| | |||||| ||  | |  ||||||||||||||||||||||||||||||||||||    
T  26961086 caaactacttggaagatacttgggacctttagaaaaattgcctttctcaatgataagtgttttgagatttgtcatcttcttg 26961005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 28792257 - 28792184
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaat 384  Q
    |||||||||||| |||||||| |||| ||| |||| ||||||||||||||| ||||| |||  |||||||||||    
T  28792257 ggaaggtgattgtatagccataagaattgagagaaattggatgaaaaaagagtttgagaattcagaatatgaat 28792184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 26648450 - 26648366
Alignment:
Q  32 tctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    ||||||||| |||||||||||   | |||| | |||||| | | ||| ||||||||||||||||||||| |||||||||||||||    
T  26648450 tctcaaactgcttggaagatatttaagacctttagaaaaatgaccattttcaatgataagtgttttgagttttgtcatcttcttg 26648366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 26754418 - 26754334
Alignment:
Q  32 tctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    ||||||||| |||||||||||   | |||| | |||||| | | ||| ||||||||||||||||||||| |||||||||||||||    
T  26754418 tctcaaactgcttggaagatatttaagacctttagaaaaatgaccattttcaatgataagtgttttgagttttgtcatcttcttg 26754334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 26823704 - 26823628
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    ||||| ||| |||||||||||||||| ||| |||| ||||| ||| ||||| ||||| |||| ||||||||||||||    
T  26823704 ggaagttgactgcatagccatgagaattgagagaaattggacgaagaaagagtttgagaatgcagaatatgaatgag 26823628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 27698823 - 27698898
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    |||||||||||| ||||||||||||| ||| |||| | ||||| ||||||| ||||| |||| ||||||||||||||    
T  27698823 ggaaggtgattgtatagccatgagaattgagagaaataggatg-aaaaagagtttgagaatgcagaatatgaatgag 27698898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 26646495 - 26646377
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||| | |||||||  |||||| ||||| ||  |||||||||| |||  ||||||||| |||||||  || ||||||  ||  ||||||||||    
T  26646495 tcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaaccgtcacgagtgtcac 26646396  T
Q  286 tgcccctgaaactgaggaa 304  Q
    ||||||||||  |||||||    
T  26646395 tgcccctgaagttgaggaa 26646377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 26752463 - 26752345
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||| | |||||||  |||||| ||||| ||  |||||||||| |||  ||||||||| |||||||  || ||||||  ||  ||||||||||    
T  26752463 tcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaaccgtcacgagtgtcac 26752364  T
Q  286 tgcccctgaaactgaggaa 304  Q
    ||||||||||  |||||||    
T  26752363 tgcccctgaagttgaggaa 26752345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 26825778 - 26825732
Alignment:
Q  87 ataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||||    
T  26825778 ataagtgttttgagatttgtcatcttcatgaaagcctttccattcca 26825732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 26979406 - 26979322
Alignment:
Q  35 caaactacttggaagatacccaggaccctcagaaaagttagcata---ttcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    ||||||||||||||||||||  ||||| | |||||| ||  |||    || ||||||||||||||||||||||||||||||||||    
T  26979406 caaactacttggaagatacctgggacctttagaaaaattgccatcagcttgaatgataagtgttttgagatttgtcatcttcttg 26979322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 26813463 - 26813410
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    |||||| |||||||||||||| ||||||||||||||| | ||| ||||||||||    
T  26813463 ttcaataataagtgttttgagttttgtcatcttcttgaaggcctttccattcca 26813410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 31284146 - 31284078
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaata 379  Q
    ||||| |||||||||||||||||||  ||| ||||| |||||||| ||||| ||||| |||| ||||||    
T  31284146 ggaagatgattgcatagccatgagatttgagagaatatggatgaagaaagaatttgagaatgcagaata 31284078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 27593191 - 27593309
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    |||| |||||||| |||| |||| ||||| ||||| ||    |||||||| |||  ||||||||| |||||||| ||||| |||  ||  ||||||||||    
T  27593191 tcatttcctctttgaagaccattgtcatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattgccggtgaaaccgtaccgagtgtcac 27593290  T
Q  286 tgcccctgaaactgaggaa 304  Q
    | || ||||||||||||||    
T  27593291 ttcctctgaaactgaggaa 27593309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 27678962 - 27678844
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| |||| |||| | ||| ||||| ||    |||||||| |||  ||||||||| |||||||| ||||| |||  ||  ||||||||||    
T  27678962 tcatctcctctttgaagaccattcttatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattcccggtgaaaccgtaccgagtgtcac 27678863  T
Q  286 tgcccctgaaactgaggaa 304  Q
    | || ||||||||||||||    
T  27678862 ttcctctgaaactgaggaa 27678844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 31284304 - 31284186
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||| ||||||| ||| ||| ||||||| ||||| ||  | |||||||| |||  ||||||||| |||||||| ||||| |||   |  ||||||||||    
T  31284304 tcatcccctctttgaagttcactatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagattgccggtgaaaccataccgagtgtcac 31284205  T
Q  286 tgcccctgaaactgaggaa 304  Q
    | ||||||||||| |||||    
T  31284204 ttcccctgaaactaaggaa 31284186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 26625193 - 26625160
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttc 113  Q
    ||||||||||||||||||||| ||||||||||||    
T  26625193 ttcaatgataagtgttttgagttttgtcatcttc 26625160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 26657941 - 26657908
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttc 113  Q
    |||||||||||| |||||||||||||||||||||    
T  26657941 ttcaatgataagagttttgagatttgtcatcttc 26657908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 26731170 - 26731137
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttc 113  Q
    ||||||||||||||||||||| ||||||||||||    
T  26731170 ttcaatgataagtgttttgagttttgtcatcttc 26731137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 26763912 - 26763879
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttc 113  Q
    |||||||||||| |||||||||||||||||||||    
T  26763912 ttcaatgataagagttttgagatttgtcatcttc 26763879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 26863563 - 26863510
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    |||||||| |||||||||||| ||| ||||||||||| | ||| ||||||||||    
T  26863563 ttcaatgacaagtgttttgagttttttcatcttcttgaaggcctttccattcca 26863510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 387
Target Start/End: Complemental strand, 27229090 - 27229016
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    |||||||||||| ||||||||||||  ||| |||| |||||||  |||||| ||| | |||| ||||||||||||||    
T  27229090 ggaaggtgattgtatagccatgagacttgagagaaattggatg--aaaagagttttagaatgcagaatatgaatgag 27229016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 25075833 - 25075801
Alignment:
Q  84 atgataagtgttttgagatttgtcatcttcttg 116  Q
    |||||||||||||||| ||||||||||||||||    
T  25075833 atgataagtgttttgatatttgtcatcttcttg 25075801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 26622950 - 26622870
Alignment:
Q  228 attcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaactgaggaacact 308  Q
    |||||||| |||  ||||||||| |||||||| || || |||  ||  |||||||||||||| |||||||| |||||||||    
T  26622950 attcccttgtcagtaagagccttgtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaacttaggaacact 26622870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 26728928 - 26728848
Alignment:
Q  228 attcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaactgaggaacact 308  Q
    |||||||| |||  ||||||||| |||||||| || || |||  ||  |||||||||||||| |||||||| |||||||||    
T  26728928 attcccttgtcagtaagagccttgtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaacttaggaacact 26728848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 26886039 - 26886003
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    |||||||||||| |||||||| |||||||||||||||    
T  26886039 ttcaatgataagagttttgagttttgtcatcttcttg 26886003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 27609333 - 27609369
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    |||||||||||||||||| || |||||||||||||||    
T  27609333 ttcaatgataagtgttttcagttttgtcatcttcttg 27609369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 27677827 - 27677903
Alignment:
Q  228 attcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaactgaggaa 304  Q
    |||||||| ||| |||||||||| |||||||| ||||| |||  ||  ||||||||||| || |||||| |||||||    
T  27677827 attcccttgtcatcaagagccttgtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaattgaggaa 27677903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 27678804 - 27678748
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttga 367  Q
    |||||||||||||||||||||||||  | | |||| || |||||||||||| |||||    
T  27678804 ggaaggtgattgcatagccatgagattttagagaaattagatgaaaaaagagtttga 27678748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 27680931 - 27680895
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    |||||||||||||||||| || |||||||||||||||    
T  27680931 ttcaatgataagtgttttcagttttgtcatcttcttg 27680895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 27696802 - 27696838
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  27696802 ttcaatgataactgttttgagttttgtcatcttcttg 27696838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 27716712 - 27716748
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    |||||||||||||||||| || |||||||||||||||    
T  27716712 ttcaatgataagtgttttcagttttgtcatcttcttg 27716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 51; Significance: 4e-20; HSPs: 5)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 3593 - 3715
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||| | |||||||| |||  ||||||||| |||||||| |||||||||  ||  |||||||||     
T  3593 tcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcag 3692  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| ||||| |||||||||    
T  3693 tgcccctaaaactaaggaacact 3715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 14526 - 14648
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||| | |||||||| |||  ||||||||| |||||||| |||||||||  ||  |||||||||     
T  14526 tcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcag 14625  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| ||||||| |||||||    
T  14626 tgcccctaaaactgatgaacact 14648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 8130 - 8206
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    |||||||||||| ||||||||||||| ||| |||| | ||||||||||||| ||||| |||| ||||||||||||||    
T  8130 ggaaggtgattgtatagccatgagaattgagagaaataggatgaaaaaagagtttgagaatgcagaatatgaatgag 8206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 3751 - 3825
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatg 385  Q
    |||||||||||| |||||||||| || ||| |||| | ||||||||||||| ||||| |||| ||||||||||||    
T  3751 ggaaggtgattgtatagccatgacaattgagagaaataggatgaaaaaagagtttgagaatgcagaatatgaatg 3825  T

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Target: scaffold0349; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 14684 - 14759
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    |||||||||||| ||||||||||||| ||| |||| | ||||| ||||||| ||||| |||| ||||||||||||||    
T  14684 ggaaggtgattgtatagccatgagaattgagagaaataggatg-aaaaagagtttgagaatgcagaatatgaatgag 14759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 4842 - 4964
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||    |||||||| |||  ||||||||| |||||||| |||||||||  || ||||||||||     
T  4842 tcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcaa 4941  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  4942 tgcccctaaaactgaggaacact 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 13803 - 13925
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||    |||||||| |||  ||||||||| |||||||| |||||||||  || ||||||||||     
T  13803 tcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcag 13902  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| |||||||||||||||    
T  13903 tgcccctaaaactgaggaacact 13925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 13961 - 14037
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaatgag 387  Q
    ||||||| ||||||||||||||| || ||| |||| ||||||||||||||| ||||| |||  ||||||||||||||    
T  13961 ggaaggtaattgcatagccatgataattgagagaaattggatgaaaaaagagtttgagaattcagaatatgaatgag 14037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 5000 - 5073
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatgaat 384  Q
    |||||||||||| |||||||| |||| ||| |||| ||||||||||||||| ||||| |||  |||||||||||    
T  5000 ggaaggtgattgtatagccataagaattgagagaaattggatgaaaaaagagtttgagaattcagaatatgaat 5073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 88 - 210
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||    |||||||| |||  ||||||||| |||||||| |||||||||  || ||||||||||     
T  88 tcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcag 187  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| ||||| |||||||||    
T  188 tgcccctaaaactaaggaacact 210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 249 - 302
Alignment:
Q  314 aggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttga 367  Q
    ||||||||||||||||||||||| ||| |||| || |||||||||||| |||||    
T  249 aggtgattgcatagccatgagaattgagagaaattagatgaaaaaagagtttga 302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 7541 - 7419
Alignment:
Q  186 tcatctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcac 285  Q
    ||||||||||||| ||||||||| ||||| ||||| ||    |||||||| |||  ||||||||| |||||||| |||||||||  || ||||||||||     
T  7541 tcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcag 7442  T
Q  286 tgcccctgaaactgaggaacact 308  Q
    ||||||| ||||| |||||||||    
T  7441 tgcccctaaaactaaggaacact 7419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 7380 - 7327
Alignment:
Q  314 aggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttga 367  Q
    ||||||||||||||||||||||| ||| |||| || |||||||||||| |||||    
T  7380 aggtgattgcatagccatgagaattgagagaaattagatgaaaaaagagtttga 7327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 17991376 - 17991477
Alignment:
Q  32 tctcaaactacttggaagatacccaggaccctcagaaaagttagcatattcaatgataagtgttttgagatttgtcatcttcttgcaagccattccattc 131  Q
    |||||||||| |||||||||||   ||||| |||||||| |   ||| ||||||||||||||||||||| ||| ||||||||||| | ||| ||||||||    
T  17991376 tctcaaactatttggaagatacttgggaccttcagaaaaatggtcattttcaatgataagtgttttgagttttttcatcttcttgaaggcctttccattc 17991475  T
Q  132 ca 133  Q
    ||    
T  17991476 ca 17991477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 18724285 - 18724365
Alignment:
Q  228 attcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaactgaggaacact 308  Q
    |||||||| |||  ||||||||| ||||||| ||| ||||||  ||| |||||||||||||||||||| ||||||||||||    
T  18724285 attcccttgtcagtaagagccttgtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacact 18724365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 382
Target Start/End: Original strand, 18699716 - 18699787
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatga 382  Q
    |||||||||||||||||||||||||| ||| ||||  | |||||||||||| ||||| |||| |||||||||    
T  18699716 ggaaggtgattgcatagccatgagaattgagagaaactagatgaaaaaagagtttgagaatgcagaatatga 18699787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 18679781 - 18679847
Alignment:
Q  242 aagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaactgaggaacact 308  Q
    ||||||||| ||||||| ||| ||||||  ||| |||||||||||||||||||| ||||||||||||    
T  18679781 aagagccttgtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacact 18679847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 18687897 - 18687943
Alignment:
Q  87 ataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  18687897 ataagtgttttgagatttgtcatcttcttgaaagcctttccattcca 18687943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 18729779 - 18729825
Alignment:
Q  87 ataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  18729779 ataagtgttttgagatttgtcatcttcttgaaagcctttccattcca 18729825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 18697678 - 18697731
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    |||||| |||||||||||||||||||||||||||||| | ||| ||||||||||    
T  18697678 ttcaataataagtgttttgagatttgtcatcttcttgaaggcctttccattcca 18697731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 382
Target Start/End: Original strand, 18655793 - 18655864
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatga 382  Q
    ||||||||||||| ||||||||| || ||| ||||  |||||||||||||| ||||| |||| |||||||||    
T  18655793 ggaaggtgattgcctagccatgaaaattgagagaaactggatgaaaaaagagtttgagaatgcagaatatga 18655864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 382
Target Start/End: Original strand, 18679883 - 18679954
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatga 382  Q
    ||||||||||||||||||||||| ||  || ||||  |||||||||||||| ||||| |||| |||||||||    
T  18679883 ggaaggtgattgcatagccatgaaaatagagagaaactggatgaaaaaagagtttgagaatgcagaatatga 18679954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 382
Target Start/End: Original strand, 18731820 - 18731891
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactgaaagaatttggatgaaaaaagactttgaaaatggagaatatga 382  Q
    ||||||||||||||||||||||| ||  || ||||  |||||||||||||| ||||| |||| |||||||||    
T  18731820 ggaaggtgattgcatagccatgaaaatcgagagaaactggatgaaaaaagagtttgagaatgcagaatatga 18731891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 18653761 - 18653807
Alignment:
Q  87 ataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    |||||||||||||||||||||||||||||| | ||| ||||||||||    
T  18653761 ataagtgttttgagatttgtcatcttcttgaaggcctttccattcca 18653807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 18722357 - 18722403
Alignment:
Q  87 ataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    |||||||||||||||||||||||||||||| | ||| ||||||||||    
T  18722357 ataagtgttttgagatttgtcatcttcttgaaggcctttccattcca 18722403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 18677836 - 18677889
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttgcaagccattccattcca 133  Q
    |||||| |||||||||||||||||||||||||||||| | | | ||||||||||    
T  18677836 ttcaataataagtgttttgagatttgtcatcttcttgaaggtctttccattcca 18677889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 18655677 - 18655757
Alignment:
Q  228 attcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaactgaggaacact 308  Q
    |||||||| |||  |||||| || |||||||  || ||||||  ||| |||||||||||||||||||| ||||||||||||    
T  18655677 attcccttgtcagtaagagctttgtagagatgcccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacact 18655757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 308
Target Start/End: Original strand, 18731752 - 18731784
Alignment:
Q  276 cgagtgtcactgcccctgaaactgaggaacact 308  Q
    |||||||||||||||||||| ||||||||||||    
T  18731752 cgagtgtcactgcccctgaagctgaggaacact 18731784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 28164523 - 28164642
Alignment:
Q  189 tctcctctttcaagatcattatcatccatgaaagtacgaattcccttatcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgc 288  Q
    |||||||| |||||||||  |||||| ||||| ||  |||||||||| ||  |||| |||||||||||||  || || |||  ||  |||||||||||||    
T  28164523 tctcctctctcaagatcacaatcatcaatgaatgtgtgaattcccttgtcgtcaagggccttatagagatggccagtgaaaccgtcacgagtgtcactgc 28164622  T
Q  289 ccctgaaactgaggaacact 308  Q
    |||| |||||||||||||||    
T  28164623 ccctaaaactgaggaacact 28164642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 266568 - 266604
Alignment:
Q  80 ttcaatgataagtgttttgagatttgtcatcttcttg 116  Q
    |||||||| ||||||||||||||||||||||||||||    
T  266568 ttcaatgacaagtgttttgagatttgtcatcttcttg 266604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 340
Target Start/End: Original strand, 268673 - 268702
Alignment:
Q  311 ggaaggtgattgcatagccatgagaactga 340  Q
    ||||||||||||||||||||||||||||||    
T  268673 ggaaggtgattgcatagccatgagaactga 268702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 308
Target Start/End: Original strand, 28127928 - 28127960
Alignment:
Q  276 cgagtgtcactgcccctgaaactgaggaacact 308  Q
    |||||||||||||||||||| ||||||||||||    
T  28127928 cgagtgtcactgcccctgaagctgaggaacact 28127960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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