View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16482_low_15 (Length: 201)

Name: NF16482_low_15
Description: NF16482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16482_low_15
NF16482_low_15
[»] chr8 (8 HSPs)
chr8 (20-175)||(36402918-36403073)
chr8 (56-175)||(26132062-26132181)
chr8 (44-171)||(10331470-10331596)
chr8 (37-170)||(10333542-10333674)
chr8 (125-175)||(5434032-5434082)
chr8 (65-177)||(44376641-44376752)
chr8 (125-175)||(36402201-36402251)
chr8 (126-175)||(26847097-26847146)
[»] chr1 (6 HSPs)
chr1 (20-175)||(13416228-13416383)
chr1 (20-177)||(5490509-5490665)
chr1 (43-178)||(31109236-31109371)
chr1 (124-175)||(31116681-31116732)
chr1 (125-172)||(5491334-5491381)
chr1 (128-175)||(26240872-26240919)
[»] chr7 (12 HSPs)
chr7 (20-175)||(24874471-24874626)
chr7 (36-178)||(767133-767275)
chr7 (36-175)||(767875-768014)
chr7 (125-175)||(41965775-41965825)
chr7 (65-175)||(24873751-24873861)
chr7 (34-177)||(27918516-27918660)
chr7 (36-106)||(27917764-27917834)
chr7 (95-173)||(21975693-21975771)
chr7 (128-175)||(18569020-18569067)
chr7 (128-175)||(18652891-18652938)
chr7 (125-175)||(41965112-41965162)
chr7 (127-175)||(42817798-42817846)
[»] chr4 (5 HSPs)
chr4 (20-175)||(21281054-21281209)
chr4 (25-175)||(45140454-45140604)
chr4 (44-175)||(45141060-45141191)
chr4 (125-173)||(53778413-53778461)
chr4 (131-175)||(42792775-42792819)
[»] scaffold0006 (2 HSPs)
scaffold0006 (20-152)||(285903-286035)
scaffold0006 (125-170)||(285183-285228)
[»] chr6 (5 HSPs)
chr6 (34-175)||(10965230-10965371)
chr6 (48-184)||(2138468-2138603)
chr6 (34-175)||(709322-709462)
chr6 (124-175)||(10966377-10966428)
chr6 (65-175)||(8113373-8113482)
[»] chr3 (11 HSPs)
chr3 (25-175)||(43453439-43453589)
chr3 (36-175)||(14746811-14746949)
chr3 (68-176)||(43454103-43454210)
chr3 (34-175)||(42020793-42020934)
chr3 (36-175)||(14746041-14746180)
chr3 (43-116)||(35982554-35982627)
chr3 (127-175)||(15287567-15287615)
chr3 (124-175)||(16076210-16076261)
chr3 (125-175)||(41419617-41419667)
chr3 (25-85)||(54308966-54309026)
chr3 (65-113)||(41418822-41418869)
[»] chr2 (5 HSPs)
chr2 (68-175)||(7754012-7754119)
chr2 (128-175)||(7754968-7755015)
chr2 (133-175)||(127741-127783)
chr2 (125-175)||(4716871-4716921)
chr2 (127-175)||(44296860-44296908)
[»] chr5 (5 HSPs)
chr5 (126-175)||(23253485-23253534)
chr5 (127-175)||(39466885-39466933)
chr5 (128-176)||(24565572-24565620)
chr5 (128-176)||(24606608-24606656)
chr5 (127-175)||(39937906-39937954)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 3e-56; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 36402918 - 36403073
Alignment:
Q  20 aggtggaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnn 119  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       
T  36402918 aggtggaaaccatgttaggataggattgaatatgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaactgtgt 36403017  T
Q  120 nnnnctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
        |||||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  36403018 ttttctcgtggtccaccggtgagggacctaattggaccctcactctagaatccacc 36403073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 26132062 - 26132181
Alignment:
Q  56 taattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaaggacctaattgga 155  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||| |||| |||||||||||||    
T  26132062 taattgtatatgttctcacttttaatttcaataaatcttaaccatctattttatctaacggtgtttttctcgtggtccaccagtgagggacctaattgga 26132161  T
Q  156 ccttcaccctagaatccacc 175  Q
    || ||||| || ||||||||    
T  26132162 ccctcaccttaaaatccacc 26132181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 10331596 - 10331470
Alignment:
Q  44 attgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaag 143  Q
    ||||||||| |||||||||| ||||||| | |||||||| |||||||||| |||||||||||| ||||||| |       |||||||||||||| |||      
T  10331596 attgaatgtcagtaattgtacatgttcttatttttaatt-gaataaatctgaaccatctatttcatctaacagtttttttctcgtggtccaccgatgaga 10331498  T
Q  144 gacctaattggaccttcaccctagaatc 171  Q
    |||||||||||||| |||||||| ||||    
T  10331497 gacctaattggaccctcaccctataatc 10331470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 10333542 - 10333674
Alignment:
Q  37 ggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccacc 136  Q
    |||||| ||||||||| |||  |||||||| ||| |||||||||||| ||||||||| ||||||||||||||| || | |       ||||||||||||     
T  10333542 ggatagaattgaatgtaagtgcttgtatatattcccacttttaatttaaataaatctaaaccatctattttatttagctg-tgttttctcgtggtccact 10333640  T
Q  137 ggtgaaggacctaattggaccttcaccctagaat 170  Q
    ||||| ||||||||||||||| ||||| ||||||    
T  10333641 ggtgagggacctaattggaccctcaccttagaat 10333674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 5434082 - 5434032
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  5434082 tcgtggtccaccggtgaaggacttaattggaccctcaccctagaatccacc 5434032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 65 - 177
Target Start/End: Complemental strand, 44376752 - 44376641
Alignment:
Q  65 atgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaaggacctaattggaccttcaccc 164  Q
    |||||||| |||||||||||||||||||| |||||||||||| || ||  ||        ||||||||||||| ||| |||| |||||||||| || |||    
T  44376752 atgttctc-cttttaatttgaataaatctgaaccatctatttaatttattggtatttttttcgtggtccaccgatgagggacgtaattggaccctcgccc 44376654  T
Q  165 tagaatccaccgt 177  Q
    |||||||||||||    
T  44376653 tagaatccaccgt 44376641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 36402251 - 36402201
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||||||||  ||||||||||||||| |||||||| ||||||||    
T  36402251 tcgtggtccaccggtgtgggacctaattggaccctcaccctaaaatccacc 36402201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 26847146 - 26847097
Alignment:
Q  126 cgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||| ||||||||| |||| |||||||||| |||||||||||||||||    
T  26847146 cgtggttcaccggtgagggacttaattggaccctcaccctagaatccacc 26847097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 3e-56; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 13416228 - 13416383
Alignment:
Q  20 aggtggaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnn 119  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       
T  13416228 aggtggaaaccatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaatatatcttaaccatctattttatctaacggtgt 13416327  T
Q  120 nnnnctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
        ||||||||||||||| || ||||||||||||||| ||| |||||||||||||    
T  13416328 ttttctcgtggtccaccggcgagggacctaattggaccctcatcctagaatccacc 13416383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 5490665 - 5490509
Alignment:
Q  20 aggtggaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnn 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||       
T  5490665 aggtggaaaccatgttaggataggattgaatgtgagtaattgtatatgttcttacttttaatttgaataaatcttaaccatctattttatttaacggtgt 5490566  T
Q  120 nnnnctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccaccgt 177  Q
        |||||||||||||| |||  |||||||||| ||| ||| |||||||||||||||    
T  5490565 ttttctcgtggtccaccgatgagagacctaattgaaccctca-cctagaatccaccgt 5490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 178
Target Start/End: Complemental strand, 31109371 - 31109236
Alignment:
Q  43 gattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaa 142  Q
    ||||||||||||| |  | || |||||| |||||||||||| ||||||||| |||||  | ||| |||||  ||       ||||| ||||||||||||     
T  31109371 gattgaatgtgagcagctctacatgttcccacttttaatttaaataaatctgaaccacttgtttaatctattggtatttttctcgtagtccaccggtgag 31109272  T
Q  143 ggacctaattggaccttcaccctagaatccaccgta 178  Q
    ||||||||||||||| ||||||||||||||||||||    
T  31109271 ggacctaattggaccctcaccctagaatccaccgta 31109236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 31116681 - 31116732
Alignment:
Q  124 ctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||||||||    
T  31116681 ctcgtagtccaccggtgagggacctaattggaccctcaccctagaatccacc 31116732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 5491334 - 5491381
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatcc 172  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  5491334 tcgtggtccaccggtgagggacctaattggaccctcatcctagaatcc 5491381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 26240872 - 26240919
Alignment:
Q  128 tggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||||||| |||| |||||| ||| |||||||||||||||||    
T  26240872 tggtccaccggtgagggacttaattgaaccctcaccctagaatccacc 26240919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 24874471 - 24874626
Alignment:
Q  20 aggtggaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnn 119  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||       
T  24874471 aggtggaaaccatgttaggataggattgaatatgagtaattgtatatattctcacatttaatttgaataaatcttaaccatctattttatctaacggtat 24874570  T
Q  120 nnnnctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
        |||||||||||||| ||| ||||||||||| ||| |||||||||||||||||    
T  24874571 ttttctcgtggtccaccgatgagggacctaattgaaccctcaccctagaatccacc 24874626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 178
Target Start/End: Complemental strand, 767275 - 767133
Alignment:
Q  36 aggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccac 135  Q
    |||||||||||||||||||||| |||||||||||  || |||||||| |||||||||| |||||| ||||| |||||||||        || || |||||    
T  767275 aggataggattgaatgtgagtagttgtatatgtttccatttttaattcgaataaatctgaaccatgtatttaatctaacggtgtttttttcatgatccac 767176  T
Q  136 cggtgaaggacctaattggaccttcaccctagaatccaccgta 178  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  767175 cggtgagggacttaattggaccctcaccctagaatccaccgta 767133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 767875 - 768014
Alignment:
Q  36 aggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccac 135  Q
    |||||| |||| ||||| |||| ||||||||||| ||| ||||||||| |||||| || | ||||||||||||||||   |        |||||||||||    
T  767875 aggataagattaaatgtaagtagttgtatatgttttcatttttaatttaaataaacctgatccatctattttatctacttgtatttttttcgtggtccac 767974  T
Q  136 cggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||| |||| |||||||||| |||||||| ||||||||    
T  767975 cggtgagggacttaattggaccctcaccctaaaatccacc 768014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 41965775 - 41965825
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  41965775 tcgtggtccaccggtgagggacttaattggaccctcaccctagaatccacc 41965825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 24873861 - 24873751
Alignment:
Q  65 atgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaaggacctaattggaccttcaccc 164  Q
    |||||||| |||||||||||||||||||| |||||  ||||| |||||  ||        || |||||||| | ||| ||||||||||||||| ||||||    
T  24873861 atgttctcccttttaatttgaataaatctaaaccacttatttaatctattggtgtttttttcatggtccactgatgagggacctaattggaccctcaccc 24873762  T
Q  165 tagaatccacc 175  Q
    |||||||||||    
T  24873761 tagaatccacc 24873751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 27918516 - 27918660
Alignment:
Q  34 ttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacgg-nnnnnnnctcgtggtc 132  Q
    |||||||||||||||||||||||| ||||| || || ||||| ||  ||| ||||||| | |||||||||||| |||||  ||         ||||| ||    
T  27918516 ttaggataggattgaatgtgagtagttgtacatattttcactattgcttttaataaatatgaaccatctatttaatctattggtattttttttcgtgatc 27918615  T
Q  133 caccggtgaaggacctaattggaccttcaccctagaatccaccgt 177  Q
    ||||||||| ||||||||||||||| ||| |||| ||| ||||||    
T  27918616 caccggtgagggacctaattggaccctcatcctaaaattcaccgt 27918660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 27917834 - 27917764
Alignment:
Q  36 aggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattt 106  Q
    |||||| |||||||||||| || ||||||||||||  | ||||||||||||||||||| || ||| |||||    
T  27917834 aggataagattgaatgtgaatagttgtatatgttcctatttttaatttgaataaatctgaagcatgtattt 27917764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 21975771 - 21975693
Alignment:
Q  95 aaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatcca 173  Q
    ||||||||||||||||||||||       || ||||||||||||||| |||||||||| |||| || || |||||||||    
T  21975771 aaccatctattttatctaacggtgtttttcttgtggtccaccggtgagggacctaattagaccctcgccatagaatcca 21975693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 18569020 - 18569067
Alignment:
Q  128 tggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||||||| |||  |||| |||||||||||||||||||||||    
T  18569020 tggtccaccggtgagggatttaataggaccttcaccctagaatccacc 18569067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 18652938 - 18652891
Alignment:
Q  128 tggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||||||| |||  |||| |||||||||||||||||||||||    
T  18652938 tggtccaccggtgagggatttaataggaccttcaccctagaatccacc 18652891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 41965162 - 41965112
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||||  ||| |||| |||||||||| |||||||||||||||||    
T  41965162 tcgtggtccaccaatgagggacttaattggaccctcaccctagaatccacc 41965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 42817846 - 42817798
Alignment:
Q  127 gtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||| ||| |||| |||||||||| |||||||||||| ||||    
T  42817846 gtggtccaccgatgagggacttaattggaccatcaccctagaattcacc 42817798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 21281054 - 21281209
Alignment:
Q  20 aggtggaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnn 119  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       
T  21281054 aggtggaaaccatgttaggataagattgaatgtgtgtaattgtatatgttctcacttttaatttgaataaattttaaccatctattttatctaacggtgt 21281153  T
Q  120 nnnnctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
        |||||||||||||| ||| ||| ||||||||||| |||||||||||||||||    
T  21281154 ttttctcgtggtccaccgatgagggatctaattggaccctcaccctagaatccacc 21281209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 25 - 175
Target Start/End: Complemental strand, 45140604 - 45140454
Alignment:
Q  25 gaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnc 124  Q
    ||||| || ||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||| || ||   |       |    
T  45140604 gaaaccattttaggataggattaaatgtgagtagttgtacatgttcccacttttaatttgaataaatctgaaccatctatttcatatataagtgtttttc 45140505  T
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||| |||| ||| |||||||| | ||||||||||||||||||||||||||    
T  45140504 tcgttgtccgccgatgaaggacttgattggaccttcaccctagaatccacc 45140454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 45141060 - 45141191
Alignment:
Q  44 attgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaag 143  Q
    |||||||||||  | ||| | ||||| || |||||||| ||||||||||| |||||||||||| ||||| ||        ||| ||||||| || ||| |    
T  45141060 attgaatgtgaaaagttgcacatgttatctcttttaatctgaataaatctgaaccatctatttcatctatcgttgtttttctcatggtccatcgatgagg 45141159  T
Q  144 gacctaattggaccttcaccctagaatccacc 175  Q
    || ||||||||||| |||||||||||||||||    
T  45141160 gatctaattggaccctcaccctagaatccacc 45141191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 53778413 - 53778461
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatcca 173  Q
    ||||||||||||||||| |||| ||| |||||| |||||||||||||||    
T  53778413 tcgtggtccaccggtgagggacttaaatggaccctcaccctagaatcca 53778461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 42792819 - 42792775
Alignment:
Q  131 tccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||| |||||| |||| |||||||||| |||||||||||||||||    
T  42792819 tccatcggtgagggacttaattggaccctcaccctagaatccacc 42792775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 285903 - 286035
Alignment:
Q  20 aggtggaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnn 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  285903 aggtggaaaccatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggtgt 286002  T
Q  120 nnnnctcgtggtccaccggtgaaggacctaatt 152  Q
        |||||||||||||||| | ||||||||||    
T  286003 ttttctcgtggtccaccggtaagggacctaatt 286035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 285228 - 285183
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaat 170  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||    
T  285228 tcgtggtccaccggtaagggacctaattggaccctcaccctagaat 285183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 10965371 - 10965230
Alignment:
Q  34 ttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtcc 133  Q
    |||||||||||||||||||||||| ||||| |||||  |||||||||||| ||||||| | |||||||||||| |||||| ||       ||| ||||||    
T  10965371 ttaggataggattgaatgtgagtagttgtacatgtttccacttttaatttaaataaatttgaaccatctatttaatctaatggtatttttctcatggtcc 10965272  T
Q  134 accggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||| |||  ||| ||||||||||||||||||| ||||||||    
T  10965271 accgatgagagacttaattggaccttcaccctaaaatccacc 10965230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 2138603 - 2138468
Alignment:
Q  48 aatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaaggacc 147  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||| || ||  ||       |||||||||||||||||| |||||    
T  2138603 aatgtgagtagttgtacatgtt-tcacttttaatttgaataaatctcaaccatctatttaatttattggtatttttctcgtggtccaccggtgagggacc 2138505  T
Q  148 taattggaccttcaccctagaatccaccgtagttatt 184  Q
    |||||||||| |||||||||||| |||| || |||||    
T  2138504 taattggaccctcaccctagaattcaccttaattatt 2138468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 709462 - 709322
Alignment:
Q  34 ttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtcc 133  Q
    |||||||||||||||||||||||| ||||| || || ||| ||||||||||||||||||| |||||||||||| |||||  ||       |||||| |||    
T  709462 ttaggataggattgaatgtgagtagttgtacatatt-tcatttttaatttgaataaatctgaaccatctatttaatctattggtatttttctcgtgatcc 709364  T
Q  134 accggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    | |||||| ||| ||||||||||| ||| |||||||| ||||    
T  709363 atcggtgagggatctaattggaccctcatcctagaattcacc 709322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 10966377 - 10966428
Alignment:
Q  124 ctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10966377 ctcgtggtccaccggtgagggacctaattggaccttcaccctagaatccacc 10966428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 8113482 - 8113373
Alignment:
Q  65 atgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaaggacctaattggaccttcaccc 164  Q
    |||||||| |||||||||||||||||| | |||||||||||| || ||  ||        ||||||||||| | ||||||||||||||||||| || |||    
T  8113482 atgttctc-cttttaatttgaataaatttgaaccatctatttaatttattggtattattttcgtggtccacagatgaaggacctaattggaccctcgccc 8113384  T
Q  165 tagaatccacc 175  Q
    |||||||||||    
T  8113383 tagaatccacc 8113373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 25 - 175
Target Start/End: Complemental strand, 43453589 - 43453439
Alignment:
Q  25 gaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnc 124  Q
    ||||| || ||||||||| |||||||||||||| ||||| |||||| || ||||||||| ||||||| | |||||||||||| |||||  ||       |    
T  43453589 gaaaccattttaggatagaattgaatgtgagtagttgtacatgttcccaattttaatttaaataaatttgaaccatctatttaatctattggtatttttc 43453490  T
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||| |||||| |||  |||||||||| |||||||||||||||||    
T  43453489 tcgtggtccagcggtgagggatttaattggaccctcaccctagaatccacc 43453439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 14746811 - 14746949
Alignment:
Q  36 aggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccac 135  Q
    |||||||||||||||||||||| |||||||||||  || |||||||| |||||||| | |||||| ||||| |||||||||        |||||||||||    
T  14746811 aggataggattgaatgtgagtagttgtatatgtttccatttttaattcgaataaatttgaaccatgtatttaatctaacggtgtttttttcgtggtccac 14746910  T
Q  136 cggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    || ||| |||| |||||||||| ||| |||||||||||||    
T  14746911 cgatgagggacttaattggaccctca-cctagaatccacc 14746949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 43454103 - 43454210
Alignment:
Q  68 ttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaaggacctaattggaccttcaccctag 167  Q
    ||||| |||| ||||||||||||||| |||||||||||||||| | |||       |||||||||||| ||||| ||||||||||||||| |||||||||    
T  43454103 ttctctctttgaatttgaataaatctgaaccatctattttatccatcggtgtttt-ctcgtggtccacaggtgagggacctaattggaccctcaccctag 43454201  T
Q  168 aatccaccg 176  Q
    |||||||||    
T  43454202 aatccaccg 43454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 42020793 - 42020934
Alignment:
Q  34 ttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtcc 133  Q
    |||||||||||||||||||||||| ||||| |||||  |||| ||  ||| ||||||||| |||||||||||| |||||  ||        ||||| |||    
T  42020793 ttaggataggattgaatgtgagtagttgtacatgtttacactattgcttttaataaatctgaaccatctatttaatctattggtatttttttcgtgatcc 42020892  T
Q  134 accggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||| ||  |||||||||||||| |||||||||||| ||||    
T  42020893 accggcgagagacctaattggaccctcaccctagaattcacc 42020934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 14746180 - 14746041
Alignment:
Q  36 aggataggattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccac 135  Q
    |||||| |||| ||||||||||   |||||||||  || ||||||||| ||||||||| | |||||||||| |||||  ||        |||||||||||    
T  14746180 aggataagattaaatgtgagtagccgtatatgtttccatttttaatttaaataaatctgatccatctatttcatctagtggcgtttttttcgtggtccac 14746081  T
Q  136 cggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||| || |||  |||||||||| |||||||||||||||||    
T  14746080 cggggagggatttaattggaccctcaccctagaatccacc 14746041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 35982627 - 35982554
Alignment:
Q  43 gattgaatgtgagtaattgtatatgttctcacttttaatttgaataaatcttaaccatctattttatctaacgg 116  Q
    ||||||||||||||| |||||||||||   | |||||||| |||||||||| |||||| ||||| |||||||||    
T  35982627 gattgaatgtgagtagttgtatatgtttctatttttaattcgaataaatctgaaccatgtatttaatctaacgg 35982554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 15287615 - 15287567
Alignment:
Q  127 gtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  15287615 gtggtccaccggtgagggacttaattggaccctcaccctagaatccacc 15287567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 16076261 - 16076210
Alignment:
Q  124 ctcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||||  ||||| ||||||||||||||| |||||||||||||||||    
T  16076261 ctcgtggtccattggtgagggacctaattggaccctcaccctagaatccacc 16076210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 41419617 - 41419667
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||||||||| |||||||||||| || |||| ||||||||||||    
T  41419617 tcgtggtccaccggtgagggacctaattggcccctcacactagaatccacc 41419667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 54309026 - 54308966
Alignment:
Q  25 gaaacaatgttaggataggattgaatgtgagtaattgtatatgttctcacttttaatttga 85  Q
    ||||| || ||| |||| ||||||||||||||| ||||| ||||||||| |||||||||||    
T  54309026 gaaaccattttaagatatgattgaatgtgagtagttgtacatgttctcaattttaatttga 54308966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 41418869 - 41418822
Alignment:
Q  65 atgttctcacttttaatttgaataaatcttaaccatctattttatctaa 113  Q
    |||||||| |||||||||||||||||||| |||||| ||||| ||||||    
T  41418869 atgttctc-cttttaatttgaataaatctgaaccatttatttaatctaa 41418822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 7754119 - 7754012
Alignment:
Q  68 ttctcacttttaatttgaataaatcttaaccatctattttatctaacggnnnnnnnctcgtggtccaccggtgaaggacctaattggaccttcaccctag 167  Q
    ||||| |||||||||||||||||||| ||| ||||||||||| ||  ||        ||||| |||||||| || ||||||||||||||| |||||||||    
T  7754119 ttctcccttttaatttgaataaatctgaactatctattttatttattggtatttttttcgtgatccaccggggagggacctaattggaccctcaccctag 7754020  T
Q  168 aatccacc 175  Q
    ||||||||    
T  7754019 aatccacc 7754012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 7754968 - 7755015
Alignment:
Q  128 tggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||||||||||| ||||||  || |||||||||||||||||    
T  7754968 tggtccaccggtgaaggacttaattgatccctcaccctagaatccacc 7755015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 127741 - 127783
Alignment:
Q  133 caccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||||||| |||||| ||| |||||||||||||||||    
T  127741 caccggtgaaggacttaattgaaccctcaccctagaatccacc 127783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 4716871 - 4716921
Alignment:
Q  125 tcgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||||| |||||| |  |||||||||| |||||||||||||||||    
T  4716871 tcgtggtccaccagtgaagaatttaattggaccctcaccctagaatccacc 4716921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 44296908 - 44296860
Alignment:
Q  127 gtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||||||| |||| |||| |||||||||| |||||||||||| ||||    
T  44296908 gtggtccaccagtgagggacttaattggaccctcaccctagaattcacc 44296860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 23253485 - 23253534
Alignment:
Q  126 cgtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    |||||| ||||||||| |||| |||||||||| |||||||||||||||||    
T  23253485 cgtggttcaccggtgagggacttaattggaccctcaccctagaatccacc 23253534  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 39466933 - 39466885
Alignment:
Q  127 gtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||||||| |||| |||||||||| |||||||||||| ||||    
T  39466933 gtggtccaccggtgagggacttaattggaccctcaccctagaattcacc 39466885  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 24565620 - 24565572
Alignment:
Q  128 tggtccaccggtgaaggacctaattggaccttcaccctagaatccaccg 176  Q
    |||||||||||||| |||  |||||| ||| ||||||||||||||||||    
T  24565620 tggtccaccggtgagggatttaattgaaccctcaccctagaatccaccg 24565572  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 24606656 - 24606608
Alignment:
Q  128 tggtccaccggtgaaggacctaattggaccttcaccctagaatccaccg 176  Q
    |||||||||||||| |||  |||||| ||| ||||||||||||||||||    
T  24606656 tggtccaccggtgagggatttaattgaaccctcaccctagaatccaccg 24606608  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 39937906 - 39937954
Alignment:
Q  127 gtggtccaccggtgaaggacctaattggaccttcaccctagaatccacc 175  Q
    ||||||||||||||| |||| ||| || ||| |||||||||||||||||    
T  39937906 gtggtccaccggtgagggacttaactgaaccctcaccctagaatccacc 39937954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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