View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16482_low_7 (Length: 272)
Name: NF16482_low_7
Description: NF16482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16482_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 395714 - 395966
Alignment:
| Q |
1 |
ttaggccttatttagacaaacatctaatgtgatagatattacggaagttgttttgatgggaagnnnnnnnncagagagatttcagtagggttttgagaga |
100 |
Q |
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| T |
395714 |
ttaggccttatttagacaaacatctaatgtgatagatattacggaagttgttttgatgggaagaaaaaaa--agagagatttcagtagggttttgagaga |
395811 |
T |
|
| Q |
101 |
ttcgagtgtcatggttatatggttttagggggaagtggaaatggaaatgaataagaataagaaaatagagtttgaacattataagctatatacnnnnnnn |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
395812 |
ttcgagtgtcatggttatatggttttagggggaagtggaaatggaaatgaataagaataagaaaatagagtttgaacattataagctatatac-tttttt |
395910 |
T |
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| Q |
201 |
ngtaaacagttatgaagaacttacgagaataagataaaaacaatgttcggcctatg |
256 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
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| T |
395911 |
tgtaaacagttatgaagaacttaccagaataagataaaaacaatgtttggcctatg |
395966 |
T |
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