View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16483_high_6 (Length: 236)
Name: NF16483_high_6
Description: NF16483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16483_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 33485447 - 33485663
Alignment:
| Q |
5 |
agagagaacttttagaagaagatgaaaatgacatggatgctggatatacattacttcttattcatgagattccaagaagaagaaaatcatacatattata |
104 |
Q |
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| T |
33485447 |
agagagaacttttagaagaagatgaaaataacatggatgctggatatacattacttcttattcatgaaattccaagaagaagaaaatcatacatat-ata |
33485545 |
T |
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| Q |
105 |
tactctaggaagttatagccatttcaacttaaaaacatcatttaacttgtacataaatgtatatgcataatttatcttactatatagtactttatcatca |
204 |
Q |
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| T |
33485546 |
tactctaggaagttatagccatttcaactcaaaaacatcatttaacttgtacataaatgtatatgcataatttatcttactatatagtactttatcatcg |
33485645 |
T |
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| Q |
205 |
gttgagaagagtcaaaca |
222 |
Q |
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|||||||||||||||||| |
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| T |
33485646 |
gttgagaagagtcaaaca |
33485663 |
T |
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