View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16483_low_2 (Length: 498)
Name: NF16483_low_2
Description: NF16483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16483_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 325
Target Start/End: Original strand, 4310827 - 4311132
Alignment:
| Q |
20 |
gtgcattctaagaccttttctttttaataacacaactcttatactattaaatgtatccgttattgtccactaagtgaataaaattcactttcgatacgac |
119 |
Q |
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| T |
4310827 |
gtgcattctaagaccttttctttttaataacgcaactcttatactattaaatgtatacgttatcgtccactaagtgaataaaattcactttcgatacgac |
4310926 |
T |
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| Q |
120 |
atctctaaatgcaactccctctagagttttatgatttgtttccaaaatttgattcaagtagtctaatccaaagacaattacagaaattggtttcacaaga |
219 |
Q |
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| T |
4310927 |
atctctaaatgcaactccctctagagttttatgatttgtctccaaaatttgattcaagtagtctaatccaaagacaattacagaaattggtttcacaaga |
4311026 |
T |
|
| Q |
220 |
cccttnnnnnnnnnctacgagtgtaactagaactagctgcaaaactgggtccgtccagctctttactcattcacaactgataacttatatgcaatatatg |
319 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4311027 |
cccttaaaagaaaactacgagtgtaactagaactagctgcaaaactgggtccgtccagctctttactcattcacaactgataacttatatgcaatatatg |
4311126 |
T |
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| Q |
320 |
taccaa |
325 |
Q |
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|||||| |
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| T |
4311127 |
taccaa |
4311132 |
T |
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