View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16486_high_10 (Length: 424)
Name: NF16486_high_10
Description: NF16486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16486_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 99 - 409
Target Start/End: Complemental strand, 2761183 - 2760884
Alignment:
| Q |
99 |
ttaaataacctttatgggccagtcctcttaattatattgtgctatgatatcatgcatggttgtacttatatatatccagaatttaaataaaatttctagt |
198 |
Q |
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| T |
2761183 |
ttaaataacctttatgggccagtcctcttaattatattgtgctatgatatcatg----gttgtacttatatatatccagaatttaaataaaatttctagt |
2761088 |
T |
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| Q |
199 |
gtttttcttgtcaaatcgatggaaatatggttttggctagtattacaatattatatatcatgtttannnnnnnnnnnnnngttatagttaaagcaaattc |
298 |
Q |
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| T |
2761087 |
gtttttcttgtcaaatcgatggaaatatggttttggctagcattacaatgttatatatcatgttta-----tttttttttgttatagttaaagcaaattc |
2760993 |
T |
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| Q |
299 |
ttttcaccaataagtgaaagaaagacgagatagttataatactatat----atgttaatttgagtttttgtaaatgtgttggagtttttgtaatttgagt |
394 |
Q |
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| T |
2760992 |
ttttcaccaataagtgaaaga------agatagttataatactatatatgcatgttaatttgagtttttgtaaatgggttggagtttttgtaatttgagt |
2760899 |
T |
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