View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16486_low_20 (Length: 354)

Name: NF16486_low_20
Description: NF16486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16486_low_20
NF16486_low_20
[»] chr2 (4 HSPs)
chr2 (1-337)||(28598109-28598455)
chr2 (268-338)||(13506381-13506451)
chr2 (65-99)||(22725305-22725339)
chr2 (47-99)||(33276234-33276286)
[»] chr7 (9 HSPs)
chr7 (1-325)||(2678965-2679289)
chr7 (64-110)||(8722983-8723029)
chr7 (65-110)||(33796227-33796272)
chr7 (54-110)||(5318374-5318430)
chr7 (67-110)||(17055766-17055809)
chr7 (64-110)||(27601782-27601828)
chr7 (68-110)||(45992814-45992856)
chr7 (73-110)||(5865350-5865387)
chr7 (50-110)||(6520158-6520218)
[»] chr8 (4 HSPs)
chr8 (14-167)||(4331410-4331566)
chr8 (275-336)||(4331639-4331700)
chr8 (68-110)||(4987925-4987967)
chr8 (47-99)||(30356196-30356248)
[»] chr6 (6 HSPs)
chr6 (10-110)||(28576309-28576409)
chr6 (68-110)||(19255878-19255920)
chr6 (269-315)||(28576101-28576147)
chr6 (68-110)||(33640156-33640198)
chr6 (13-110)||(333535-333631)
chr6 (73-110)||(5085886-5085923)
[»] chr3 (3 HSPs)
chr3 (118-187)||(12032589-12032658)
chr3 (64-99)||(30167215-30167250)
chr3 (64-110)||(28308710-28308756)
[»] chr4 (3 HSPs)
chr4 (65-110)||(29553600-29553645)
chr4 (68-110)||(19647947-19647989)
chr4 (70-110)||(23657635-23657675)
[»] chr1 (3 HSPs)
chr1 (46-110)||(3073966-3074030)
chr1 (67-110)||(21405075-21405118)
chr1 (68-110)||(25504853-25504895)
[»] chr5 (1 HSPs)
chr5 (73-110)||(11574554-11574591)


Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 28598109 - 28598455
Alignment:
Q  1 ttcgtcaaaattaagcttccattgccaaatgcctgaataattagcctgcaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctct 100  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28598109 ttcgtcaaaatgaagcttccattgccaaatgcttgcataattagcctccaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctct 28598208  T
Q  101 cacgcccacattcgtcgccactatcaagccacccctccatcctcccaccccaaatcgcacatctccgccatcgtaatcgacttattcttagccaagtcaa 200  Q
    |||||||| | ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28598209 cacgcccaaagtcaccgccactatcaagccacccctccctcctcccaccccaaatcgcacatctccgctatcgtaatcgacttattcttagccaagtcaa 28598308  T
Q  201 ag---------aactg--cacacacacaagtggtgccctcctaaacacttatctgtccagaaaaaagtatctctcgctctcccattaccaaccttctttc 289  Q
    ||         ||| |  |||||||||||| ||||||||||| | |||| || ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28598309 agagacgcctaaaccgcacacacacacaaggggtgccctcct-accactaatttgtccggaaaaaagtatctctcactctcccattaccaaccttctttc 28598407  T
Q  290 caatacactcttcaaaccaccctccatcgtcaacaccttccccatcac 337  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||    
T  28598408 caatacactcttcaaaccaccctccatcgtcgaaaccttcaccatcac 28598455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 13506451 - 13506381
Alignment:
Q  268 ctcccattaccaaccttctttccaatacactcttcaaaccaccctccatcgtcaacaccttccccatcaca 338  Q
    |||||||||||||||||| | ||||||| ||| || |||||||||||  | || |||||||||||||||||    
T  13506451 ctcccattaccaaccttcctcccaatactctcctcgaaccaccctcctccctccacaccttccccatcaca 13506381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 22725339 - 22725305
Alignment:
Q  65 agtaaagtcctacactcccctaacatctcctcctc 99  Q
    |||||||||||||||||| ||||||||||||||||    
T  22725339 agtaaagtcctacactcctctaacatctcctcctc 22725305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 33276286 - 33276234
Alignment:
Q  47 tgcaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctc 99  Q
    ||||||| |||||||| |||||||||||||||||||  |||||  ||||||||    
T  33276286 tgcaaagaaatatcatgaagtaaagtcctacactcctttaacaattcctcctc 33276234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 2679289 - 2678965
Alignment:
Q  1 ttcgtcaaaattaagcttccattgccaaatgcctgaataattagcctgcaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctct 100  Q
    ||||||| |||  ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||       
T  2679289 ttcgtcagaatggagcttccattgccaactgtctgaataattagcctacaaagtaatatcataaagtaaagtcctacactcccctaatatctcctcc--- 2679193  T
Q  101 cacgcccacattcgtcgccactatcaagccacccctccatcctcccaccccaaatcgcacatctccgccatcgtaatcgacttattcttagccaagtcaa 200  Q
    | || |||||  || |||  |   |||||||||||||| ||||||||||| |||||| ||||||| | || ||||||||||||||||| ||||| ||| |    
T  2679192 cgcgtccacaaccgccgctgcctccaagccacccctccttcctcccaccctaaatcgtacatctctgacaccgtaatcgacttattctcagccacgtcga 2679093  T
Q  201 aga-------actgcacacacacaagtggtgccctcctaaacacttatctgtccag--aaaaaagtatctctcgctctcccattaccaaccttctttcca 291  Q
    |||       |   | |||||||||| | ||||||||||| ||| |||| ||| ||  ||||||||||      |||||||||||||| ||||| | |||    
T  2679092 agaggcgtctaaaccgcacacacaagggttgccctcctaaccacgtatccgtctagaaaaaaaagtat------ctctcccattaccatccttcctccca 2678999  T
Q  292 atacactcttcaaaccaccctccatcgtcaacac 325  Q
    |||||||| ||||||||||||||| ||| |||||    
T  2678998 atacactcctcaaaccaccctccaccgttaacac 2678965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 8723029 - 8722983
Alignment:
Q  64 aagtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  8723029 aagtaaaatcctacactcctctaccatctcctcctctcacgcccaca 8722983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 33796272 - 33796227
Alignment:
Q  65 agtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||    
T  33796272 agtaaagtcctacactcctctaacatctcttcctcccacgcccaca 33796227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 5318374 - 5318430
Alignment:
Q  54 taatatcataaagtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    ||||||||| ||| | |||||||||||||||||||| ||||||||| |||| |||||    
T  5318374 taatatcatgaagaatagtcctacactcccctaacaactcctcctcacacgtccaca 5318430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 17055766 - 17055809
Alignment:
Q  67 taaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||||||||||||| |||||||||||| |||||||    
T  17055766 taaaatcctacactcccctaacaactcctcctctcatgcccaca 17055809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 27601828 - 27601782
Alignment:
Q  64 aagtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    ||||||| || |||||||||||||| |||||||||| ||||||||||    
T  27601828 aagtaaaatcttacactcccctaacttctcctcctcccacgcccaca 27601782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 45992814 - 45992856
Alignment:
Q  68 aaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  45992814 aaagccctacactccactaacatctcctcctcccacgcccaca 45992856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 5865350 - 5865387
Alignment:
Q  73 cctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  5865350 cctacactccgctaacaactcctcctctcacgcccaca 5865387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 6520218 - 6520158
Alignment:
Q  50 aaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||| |||||| |||||||||||| |||| | ||||||| | ||||||||||    
T  6520218 aaagaaatatcatgaagtaatgtcctacactccactaataactcctccacccacgcccaca 6520158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 4331410 - 4331566
Alignment:
Q  14 agcttccattgccaaatgcctgaataattagcctgcaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctctcacgcccacattc 113  Q
    |||||||||||||||  | |||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||  |    
T  4331410 agcttccattgccaaccgtctgaataattagtctgcaaagtaatatcataaagtaaagtcattcactcccctaacatctcctcctctcacgcccacaacc 4331509  T
Q  114 g---tcgccactatcaagccacccctccatcctcccaccccaaatcgcacatctccg 167  Q
    |    | |||||  |||||||||||||| |||||||| |||||||||||||||||||    
T  4331510 gccaccaccactgccaagccacccctccttcctcccatcccaaatcgcacatctccg 4331566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 4331639 - 4331700
Alignment:
Q  275 taccaaccttctttccaatacactcttcaaaccaccctccatcgtcaacaccttccccatca 336  Q
    ||||||||||| | ||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  4331639 taccaaccttcctcccaatacactcctcaaaccaccctccaccgtcaacatcttccccatca 4331700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 4987967 - 4987925
Alignment:
Q  68 aaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  4987967 aaagccctacactccactaacatctcctcctcccacgcccaca 4987925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 30356196 - 30356248
Alignment:
Q  47 tgcaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctc 99  Q
    |||| ||||||||||| ||||||  || |||||||| ||||||||||||||||    
T  30356196 tgcatagtaatatcatgaagtaacatcatacactcctctaacatctcctcctc 30356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 28576409 - 28576309
Alignment:
Q  10 attaagcttccattgccaaatgcctgaataattagcctgcaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctctcacgcccac 109  Q
    ||||||||||||||||||  || ||||||| |||||||||||||||| || || || ||||||||||||||||||||||| |||||||||||||||||||    
T  28576409 attaagcttccattgccatttgtctgaatagttagcctgcaaagtaacattatgaattaaagtcctacactcccctaacaactcctcctctcacgcccac 28576310  T
Q  110 a 110  Q
    |    
T  28576309 a 28576309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 19255878 - 19255920
Alignment:
Q  68 aaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  19255878 aaagccctacactccactaacatctcctcctcccacgcccaca 19255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 28576147 - 28576101
Alignment:
Q  269 tcccattaccaaccttctttccaatacactcttcaaaccaccctcca 315  Q
    ||||||||||||||||| | ||||||||||| |||||||| ||||||    
T  28576147 tcccattaccaaccttcctcccaatacactcctcaaaccatcctcca 28576101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 33640156 - 33640198
Alignment:
Q  68 aaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  33640156 aaagccctacactccactaacatctcctcctcccacgcccaca 33640198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 333631 - 333535
Alignment:
Q  13 aagcttccattgccaaatgcctgaataattagcctgcaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||||||||||||||  || ||||||| | |||||||| || || || || | ||||||||||||||||| |||||| |||||| || || |||||||    
T  333631 aagcttccattgccatttgtctgaatagt-agcctgcatagcaacattatgatgtaaagtcctacactcctctaacaactcctcatcccatgcccaca 333535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 5085923 - 5085886
Alignment:
Q  73 cctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  5085923 cctacactcctctaacatctcctcctcccacgcccaca 5085886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 12032658 - 12032589
Alignment:
Q  118 ccactatcaagccacccctccatcctcccaccccaaatcgcacatctccgccatcgtaatcgacttattc 187  Q
    ||||| |||||| ||||||||||||||||| |||||||| |||||| || | | ||||||||||||||||    
T  12032658 ccactgtcaagctacccctccatcctcccaacccaaatcacacatcaccacaaccgtaatcgacttattc 12032589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 30167250 - 30167215
Alignment:
Q  64 aagtaaagtcctacactcccctaacatctcctcctc 99  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30167250 aagtaaagtcctacactccgctaacatctcctcctc 30167215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 28308710 - 28308756
Alignment:
Q  64 aagtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    ||||||| | |||||||||||||| ||||||||||| ||||||||||    
T  28308710 aagtaaaattctacactcccctaagatctcctcctcccacgcccaca 28308756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 29553645 - 29553600
Alignment:
Q  65 agtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  29553645 agtaaagtcctacactcctctaacaactcctcctcccacgcccaca 29553600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 19647947 - 19647989
Alignment:
Q  68 aaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  19647947 aaagccctacactccactaacatctcctcctcccacgcccaca 19647989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 23657635 - 23657675
Alignment:
Q  70 agtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    ||||||||||||| |||||| ||||||||| ||||||||||    
T  23657635 agtcctacactcctctaacaactcctcctcccacgcccaca 23657675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 3073966 - 3074030
Alignment:
Q  46 ctgcaaagtaatatcataaagtaaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||||| ||||| ||| | |||||| |||||||||||||||||| ||||||||| || |||||||    
T  3073966 ctgcaaggtaatgtcagacagtaaaatcctacactcccctaacaactcctcctcccaggcccaca 3074030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 21405075 - 21405118
Alignment:
Q  67 taaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||||||||||||| |||||||||||| |||||||    
T  21405075 taaaatcctacactcccctaacaactcctcctctcatgcccaca 21405118  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 25504895 - 25504853
Alignment:
Q  68 aaagtcctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  25504895 aaagccctacactccactaacatctcctcctcccacgcccaca 25504853  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 11574591 - 11574554
Alignment:
Q  73 cctacactcccctaacatctcctcctctcacgcccaca 110  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  11574591 cctacactcctctaacatctcctcctcccacgcccaca 11574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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