View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16486_low_5 (Length: 522)

Name: NF16486_low_5
Description: NF16486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16486_low_5
NF16486_low_5
[»] chr6 (31 HSPs)
chr6 (18-503)||(11525363-11525848)
chr6 (18-367)||(7585899-7586251)
chr6 (20-367)||(21128282-21128622)
chr6 (236-367)||(19289243-19289375)
chr6 (18-184)||(17608076-17608247)
chr6 (267-367)||(11235700-11235800)
chr6 (240-367)||(18498821-18498949)
chr6 (236-367)||(31931624-31931756)
chr6 (236-367)||(11206147-11206279)
chr6 (236-367)||(12952993-12953125)
chr6 (285-367)||(18555471-18555553)
chr6 (37-93)||(19289049-19289105)
chr6 (241-363)||(20635779-20635902)
chr6 (140-186)||(14051237-14051283)
chr6 (140-186)||(14069918-14069964)
chr6 (207-363)||(17608240-17608397)
chr6 (37-78)||(19689048-19689089)
chr6 (287-367)||(25675362-25675443)
chr6 (287-362)||(9933585-9933660)
chr6 (39-78)||(18378585-18378624)
chr6 (37-67)||(17048042-17048072)
chr6 (326-367)||(25518891-25518932)
chr6 (287-367)||(25679438-25679519)
chr6 (287-367)||(25735472-25735553)
chr6 (94-170)||(30119972-30120053)
chr6 (37-73)||(9933356-9933392)
chr6 (37-73)||(17741370-17741406)
chr6 (37-73)||(17745401-17745437)
chr6 (46-78)||(18383970-18384002)
chr6 (37-73)||(18499095-18499131)
chr6 (236-363)||(22386862-22386990)
[»] chr7 (26 HSPs)
chr7 (18-367)||(8998648-8998997)
chr7 (18-368)||(13174320-13174669)
chr7 (18-367)||(11086774-11087108)
chr7 (42-184)||(19710793-19710933)
chr7 (236-357)||(24882352-24882474)
chr7 (284-367)||(29590229-29590312)
chr7 (284-362)||(13682562-13682640)
chr7 (314-362)||(3476351-3476399)
chr7 (40-78)||(9709625-9709663)
chr7 (326-367)||(26209571-26209612)
chr7 (37-73)||(29590518-29590554)
chr7 (287-362)||(8933762-8933837)
chr7 (411-485)||(30220778-30220852)
chr7 (93-170)||(44280921-44281002)
chr7 (37-78)||(13880432-13880473)
chr7 (37-78)||(15088817-15088858)
chr7 (37-78)||(30026219-30026260)
chr7 (46-78)||(2913419-2913451)
chr7 (37-73)||(3476078-3476114)
chr7 (37-73)||(8934030-8934066)
chr7 (46-78)||(10882971-10883003)
chr7 (37-73)||(12733921-12733957)
chr7 (326-362)||(12734189-12734225)
chr7 (46-78)||(13730508-13730540)
chr7 (37-73)||(26209303-26209339)
chr7 (326-362)||(48382388-48382424)
[»] chr3 (40 HSPs)
chr3 (23-367)||(51988780-51989127)
chr3 (22-368)||(17022081-17022426)
chr3 (36-368)||(13148320-13148652)
chr3 (18-368)||(22151300-22151651)
chr3 (21-367)||(31113615-31113970)
chr3 (177-367)||(41045798-41045989)
chr3 (18-116)||(41046017-41046115)
chr3 (18-172)||(10529565-10529724)
chr3 (40-341)||(12752391-12752689)
chr3 (40-121)||(11908755-11908835)
chr3 (241-368)||(10529400-10529526)
chr3 (236-367)||(21736361-21736493)
chr3 (284-367)||(2246618-2246701)
chr3 (40-121)||(51341339-51341419)
chr3 (287-357)||(27173092-27173162)
chr3 (40-113)||(49990569-49990641)
chr3 (285-356)||(15650972-15651043)
chr3 (37-120)||(27173318-27173400)
chr3 (92-187)||(37412842-37412943)
chr3 (141-257)||(51341186-51341301)
chr3 (284-367)||(13199143-13199226)
chr3 (285-356)||(15662607-15662678)
chr3 (93-170)||(934067-934149)
chr3 (40-78)||(20627269-20627307)
chr3 (93-170)||(29460927-29461008)
chr3 (93-170)||(29471779-29471860)
chr3 (411-485)||(32021176-32021250)
chr3 (40-78)||(47208041-47208079)
chr3 (133-229)||(49990446-49990539)
chr3 (207-363)||(15833463-15833619)
chr3 (37-73)||(2246908-2246944)
chr3 (133-169)||(11908864-11908900)
chr3 (37-73)||(13198899-13198935)
chr3 (37-73)||(14581672-14581708)
chr3 (46-78)||(14969645-14969677)
chr3 (37-73)||(23680073-23680109)
chr3 (37-73)||(24052310-24052346)
chr3 (46-78)||(31303720-31303752)
chr3 (46-78)||(41495305-41495337)
chr3 (42-78)||(47405243-47405279)
[»] chr2 (32 HSPs)
chr2 (18-367)||(21025180-21025529)
chr2 (18-357)||(24814273-24814623)
chr2 (36-357)||(24793717-24794048)
chr2 (236-357)||(20646478-20646600)
chr2 (267-367)||(19299912-19300012)
chr2 (267-367)||(19312919-19313019)
chr2 (18-93)||(23392387-23392463)
chr2 (21-120)||(20646239-20646337)
chr2 (18-121)||(22755767-22755869)
chr2 (18-112)||(19312659-19312752)
chr2 (40-121)||(1084346-1084426)
chr2 (314-367)||(19497940-19497993)
chr2 (37-120)||(19297317-19297399)
chr2 (267-367)||(19356546-19356647)
chr2 (326-367)||(967464-967505)
chr2 (326-367)||(24275252-24275293)
chr2 (93-170)||(18768638-18768720)
chr2 (93-170)||(28721048-28721130)
chr2 (93-170)||(28731636-28731718)
chr2 (37-78)||(9015104-9015145)
chr2 (37-78)||(13963743-13963784)
chr2 (326-367)||(17969170-17969211)
chr2 (287-367)||(22763881-22763962)
chr2 (287-367)||(22774585-22774666)
chr2 (287-367)||(22779963-22780044)
chr2 (37-73)||(17968883-17968919)
chr2 (37-73)||(19497683-19497719)
chr2 (39-83)||(19540719-19540763)
chr2 (93-153)||(21172181-21172241)
chr2 (37-73)||(24275541-24275577)
chr2 (46-78)||(25829430-25829462)
chr2 (46-78)||(38781706-38781738)
[»] chr1 (40 HSPs)
chr1 (18-367)||(23065004-23065338)
chr1 (23-363)||(19038066-19038391)
chr1 (18-357)||(22019401-22019740)
chr1 (18-368)||(28380048-28380398)
chr1 (64-367)||(5929758-5930046)
chr1 (18-362)||(26547932-26548277)
chr1 (18-367)||(44201067-44201381)
chr1 (69-279)||(20255209-20255419)
chr1 (18-363)||(22655536-22655883)
chr1 (18-363)||(22642954-22643301)
chr1 (177-367)||(52350520-52350711)
chr1 (236-357)||(28474292-28474413)
chr1 (235-367)||(45070547-45070680)
chr1 (18-100)||(52350396-52350478)
chr1 (274-368)||(20251827-20251921)
chr1 (21-93)||(28474548-28474620)
chr1 (236-367)||(46180774-46180906)
chr1 (37-120)||(45070339-45070421)
chr1 (18-100)||(19170033-19170115)
chr1 (236-359)||(20799127-20799250)
chr1 (151-363)||(17371101-17371314)
chr1 (40-78)||(22599892-22599930)
chr1 (285-367)||(23927113-23927195)
chr1 (207-363)||(21544088-21544244)
chr1 (37-78)||(22154205-22154246)
chr1 (322-367)||(22609956-22610001)
chr1 (287-362)||(18310918-18310993)
chr1 (93-170)||(147971-148052)
chr1 (93-170)||(154046-154127)
chr1 (93-170)||(5974133-5974214)
chr1 (40-78)||(25448243-25448281)
chr1 (326-367)||(675626-675667)
chr1 (37-73)||(675915-675951)
chr1 (46-78)||(1900664-1900696)
chr1 (46-74)||(2268863-2268891)
chr1 (326-362)||(14388111-14388147)
chr1 (37-73)||(20799409-20799445)
chr1 (37-73)||(22609693-22609729)
chr1 (41-187)||(34255221-34255372)
chr1 (46-78)||(36134505-36134537)
[»] chr4 (34 HSPs)
chr4 (22-368)||(36209775-36210120)
chr4 (18-367)||(14778119-14778453)
chr4 (10-363)||(33378465-33378830)
chr4 (177-367)||(17993613-17993804)
chr4 (236-357)||(18006939-18007061)
chr4 (284-357)||(19244058-19244131)
chr4 (273-367)||(14710695-14710789)
chr4 (18-100)||(17993489-17993571)
chr4 (236-367)||(18774534-18774666)
chr4 (21-121)||(19244289-19244388)
chr4 (236-351)||(8997136-8997251)
chr4 (236-367)||(16819230-16819363)
chr4 (21-120)||(18006700-18006798)
chr4 (37-120)||(16819037-16819119)
chr4 (37-120)||(18774341-18774423)
chr4 (285-367)||(23509387-23509469)
chr4 (326-367)||(55651594-55651635)
chr4 (40-78)||(13575892-13575930)
chr4 (37-78)||(37435266-37435307)
chr4 (46-83)||(56034879-56034916)
chr4 (93-171)||(40470324-40470406)
chr4 (40-78)||(22675298-22675336)
chr4 (93-170)||(25657595-25657676)
chr4 (93-170)||(40454068-40454149)
chr4 (40-78)||(45833721-45833759)
chr4 (90-170)||(47151795-47151879)
chr4 (46-78)||(3395951-3395983)
chr4 (46-78)||(9141188-9141220)
chr4 (46-78)||(12601426-12601458)
chr4 (46-78)||(14904073-14904105)
chr4 (46-78)||(19620846-19620878)
chr4 (40-120)||(29121659-29121738)
chr4 (37-73)||(49001659-49001695)
chr4 (37-73)||(55651867-55651903)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-367)||(61277-61611)
[»] chr5 (28 HSPs)
chr5 (18-368)||(40228709-40229059)
chr5 (18-368)||(20214853-20215202)
chr5 (20-368)||(40032508-40032856)
chr5 (18-368)||(1915468-1915800)
chr5 (179-367)||(13405168-13405358)
chr5 (236-367)||(20168036-20168168)
chr5 (18-120)||(13405384-13405486)
chr5 (236-367)||(13533968-13534100)
chr5 (236-367)||(36095622-36095754)
chr5 (236-367)||(36097079-36097211)
chr5 (236-355)||(35543098-35543218)
chr5 (18-121)||(20167825-20167927)
chr5 (236-357)||(13523251-13523373)
chr5 (22-112)||(23478669-23478758)
chr5 (37-120)||(36096870-36096952)
chr5 (37-112)||(36095413-36095487)
chr5 (40-86)||(33933623-33933669)
chr5 (124-235)||(11207824-11207932)
chr5 (326-367)||(20416964-20417005)
chr5 (40-171)||(11994152-11994281)
chr5 (93-170)||(1109491-1109572)
chr5 (411-485)||(17629037-17629111)
chr5 (48-78)||(21910854-21910884)
chr5 (41-184)||(3245210-3245358)
chr5 (40-121)||(11207724-11207804)
chr5 (94-170)||(36084295-36084376)
chr5 (37-73)||(13534258-13534294)
chr5 (37-73)||(32754395-32754431)
[»] chr8 (36 HSPs)
chr8 (18-357)||(29379636-29379975)
chr8 (18-345)||(17518812-17519139)
chr8 (18-368)||(8032080-8032415)
chr8 (21-172)||(23270905-23271056)
chr8 (18-257)||(40003354-40003593)
chr8 (18-184)||(18534817-18534983)
chr8 (21-367)||(19461211-19461567)
chr8 (21-367)||(19558889-19559245)
chr8 (236-367)||(23271091-23271222)
chr8 (236-367)||(7018268-7018399)
chr8 (18-357)||(28903516-28903867)
chr8 (236-367)||(22166910-22167041)
chr8 (236-359)||(22135745-22135868)
chr8 (40-121)||(21541271-21541351)
chr8 (287-368)||(40003276-40003358)
chr8 (326-367)||(3843785-3843826)
chr8 (37-78)||(16189323-16189364)
chr8 (37-78)||(18120910-18120951)
chr8 (326-367)||(20259594-20259635)
chr8 (326-367)||(21046224-21046265)
chr8 (326-367)||(22211365-22211406)
chr8 (314-367)||(23370811-23370864)
chr8 (143-220)||(45567762-45567839)
chr8 (46-78)||(16207579-16207611)
chr8 (93-170)||(20160977-20161058)
chr8 (93-170)||(20196409-20196490)
chr8 (133-229)||(21541149-21541242)
chr8 (40-112)||(1237960-1238031)
chr8 (37-73)||(3833278-3833314)
chr8 (37-73)||(3844058-3844094)
chr8 (37-73)||(3844349-3844385)
chr8 (46-78)||(17267795-17267827)
chr8 (37-73)||(20259326-20259362)
chr8 (37-73)||(21045956-21045992)
chr8 (37-73)||(22211096-22211132)
chr8 (46-78)||(39693859-39693891)
[»] scaffold0010 (2 HSPs)
scaffold0010 (18-368)||(61787-62121)
scaffold0010 (18-323)||(117378-117682)
[»] scaffold0002 (3 HSPs)
scaffold0002 (18-357)||(481491-481815)
scaffold0002 (36-368)||(156350-156682)
scaffold0002 (37-73)||(117621-117657)
[»] scaffold0655 (1 HSPs)
scaffold0655 (36-369)||(5171-5504)
[»] scaffold0018 (1 HSPs)
scaffold0018 (18-357)||(6217-6567)
[»] scaffold0017 (2 HSPs)
scaffold0017 (21-355)||(40014-40356)
scaffold0017 (236-355)||(58783-58902)
[»] scaffold1321 (1 HSPs)
scaffold1321 (18-357)||(629-980)
[»] scaffold1263 (1 HSPs)
scaffold1263 (18-357)||(822-1173)
[»] scaffold0185 (1 HSPs)
scaffold0185 (18-368)||(9351-9709)
[»] scaffold0280 (1 HSPs)
scaffold0280 (18-368)||(17504-17862)
[»] scaffold0012 (2 HSPs)
scaffold0012 (21-355)||(7317-7661)
scaffold0012 (326-367)||(127879-127920)
[»] scaffold0254 (2 HSPs)
scaffold0254 (236-357)||(22106-22227)
scaffold0254 (51-121)||(22335-22404)
[»] scaffold0073 (1 HSPs)
scaffold0073 (236-367)||(58534-58666)
[»] scaffold0090 (4 HSPs)
scaffold0090 (267-367)||(879-979)
scaffold0090 (267-367)||(5259-5359)
scaffold0090 (18-120)||(5485-5586)
scaffold0090 (37-120)||(1105-1187)
[»] scaffold0007 (2 HSPs)
scaffold0007 (236-351)||(59183-59299)
scaffold0007 (37-73)||(59005-59041)
[»] scaffold0547 (2 HSPs)
scaffold0547 (236-367)||(951-1084)
scaffold0547 (37-65)||(1233-1261)
[»] scaffold0544 (2 HSPs)
scaffold0544 (37-138)||(9619-9719)
scaffold0544 (267-340)||(9826-9899)
[»] scaffold0269 (1 HSPs)
scaffold0269 (40-121)||(7599-7679)
[»] scaffold0752 (1 HSPs)
scaffold0752 (37-367)||(2053-2394)
[»] scaffold0050 (1 HSPs)
scaffold0050 (18-93)||(35522-35597)
[»] scaffold0774 (2 HSPs)
scaffold0774 (285-367)||(6305-6387)
scaffold0774 (37-73)||(6061-6097)
[»] scaffold0908 (1 HSPs)
scaffold0908 (40-121)||(3611-3691)
[»] scaffold0207 (4 HSPs)
scaffold0207 (40-121)||(20931-21011)
scaffold0207 (133-168)||(10966-11001)
scaffold0207 (133-168)||(20867-20902)
scaffold0207 (40-93)||(11057-11110)
[»] scaffold0422 (2 HSPs)
scaffold0422 (42-171)||(11983-12117)
scaffold0422 (236-363)||(11820-11949)
[»] scaffold0154 (2 HSPs)
scaffold0154 (289-367)||(35770-35848)
scaffold0154 (37-73)||(36060-36096)
[»] scaffold0211 (1 HSPs)
scaffold0211 (143-229)||(15447-15533)
[»] scaffold0481 (1 HSPs)
scaffold0481 (284-357)||(12765-12838)
[»] scaffold0040 (1 HSPs)
scaffold0040 (286-357)||(69840-69911)
[»] scaffold0001 (1 HSPs)
scaffold0001 (322-357)||(28774-28809)
[»] scaffold0485 (1 HSPs)
scaffold0485 (37-78)||(9115-9156)
[»] scaffold0410 (1 HSPs)
scaffold0410 (326-367)||(15962-16003)
[»] scaffold0132 (1 HSPs)
scaffold0132 (40-121)||(37784-37863)
[»] scaffold0011 (1 HSPs)
scaffold0011 (143-220)||(164760-164837)
[»] scaffold0163 (2 HSPs)
scaffold0163 (287-367)||(29708-29788)
scaffold0163 (94-170)||(36535-36616)
[»] scaffold0739 (1 HSPs)
scaffold0739 (314-353)||(2241-2280)
[»] scaffold0290 (1 HSPs)
scaffold0290 (39-78)||(18361-18400)
[»] scaffold0201 (1 HSPs)
scaffold0201 (287-362)||(7469-7544)
[»] scaffold0767 (1 HSPs)
scaffold0767 (93-170)||(5013-5094)
[»] scaffold0227 (1 HSPs)
scaffold0227 (40-78)||(22992-23030)
[»] scaffold0210 (1 HSPs)
scaffold0210 (37-75)||(1965-2003)
[»] scaffold0003 (1 HSPs)
scaffold0003 (40-78)||(89812-89850)
[»] scaffold0414 (1 HSPs)
scaffold0414 (40-171)||(6877-7014)
[»] scaffold0297 (1 HSPs)
scaffold0297 (48-93)||(17307-17352)
[»] scaffold0023 (1 HSPs)
scaffold0023 (49-78)||(103888-103917)
[»] scaffold0861 (1 HSPs)
scaffold0861 (46-78)||(4694-4726)
[»] scaffold0604 (2 HSPs)
scaffold0604 (289-345)||(1-57)
scaffold0604 (37-73)||(269-305)
[»] scaffold0084 (1 HSPs)
scaffold0084 (46-78)||(49649-49681)
[»] scaffold0083 (1 HSPs)
scaffold0083 (46-78)||(25739-25771)
[»] scaffold0063 (1 HSPs)
scaffold0063 (284-348)||(15119-15183)
[»] scaffold0026 (2 HSPs)
scaffold0026 (46-78)||(8228-8260)
scaffold0026 (46-78)||(60347-60379)
[»] scaffold0022 (2 HSPs)
scaffold0022 (46-78)||(39743-39775)
scaffold0022 (46-78)||(137803-137835)
[»] scaffold0004 (1 HSPs)
scaffold0004 (46-78)||(30618-30650)


Alignment Details
Target: chr6 (Bit Score: 454; Significance: 0; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 18 - 503
Target Start/End: Original strand, 11525363 - 11525848
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  11525363 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctg 11525462  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11525463 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagacattcagaagccatttgttcagaagctgt 11525562  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  11525563 ataacatcagaatctacaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactcaaag 11525662  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgagtagcatcaaagaagattttagtattttggaagacaattcaacttggctt 417  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11525663 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtccttcattgagtagcatcaaagaagattttagtattttggaagacaattcaacttggctt 11525762  T
Q  418 cttggaaatggtgaaaagattaatttctggaatgatagttggtgtggtgcccccctctctcaggccttgaatatccctcaagcaat 503  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11525763 cttggaaatggtgaaaagattaatttctggaatgatagctggtgtggtgcccccctctctcaggccttgaatatccctcaagcaat 11525848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 18 - 367
Target Start/End: Original strand, 7585899 - 7586251
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||    
T  7585899 agacaaagttgatcaacataataggtcttggaagaacaaaagaaagcaaatgaatcaacaagaagagaaacctagaagcatctgaagaaatcaacatctg 7585998  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacg---tcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 214  Q
    ||||||| |||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7585999 aagtctatagtgcgtctgaagccaaaatgcatctgatgacgtcatcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 7586098  T
Q  215 tgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactc 313  Q
    | ||| |||||||||| ||| |||||| |||| |||||||||||||||  || || ||||||||| || ||||||||||||||||||||| ||||||||     
T  7586099 tatataaacatcagaaactg-aagttgttcaggagattcaacctgaagtttcaaatagctgtctagtggatttaacctcgtctaagagagcgaaagacta 7586197  T
Q  314 aaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7586198 aaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtccttcattga 7586251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 367
Target Start/End: Complemental strand, 21128622 - 21128282
Alignment:
Q  20 acaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaa 119  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| |||  ||||||    
T  21128622 acaaagttaatcaacataataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaaactgtgtctgaa 21128523  T
Q  120 g-tctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaag 213  Q
    | | | ||||||  ||||||  ||||||  ||     |||||||||||||||||||||             |||  | |||||||| | ||  |||||||    
T  21128522 gtttttaagtgctcctgaagataaagtgtctctgaagtgatgacgtcatcagaagcaa-------------aagctcatcagaagcgagttcatcagaag 21128436  T
Q  214 ctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagact 312  Q
    || |||| || ||||| || | |||| |||||||||| ||| ||| ||  || ||  |||||||||||| ||| |||||||||||||| || ||||||||    
T  21128435 ctttatatcaccagaagctac-agttcatcagaagatgcaatctggagtttcaaacaagctgtctattggattcaacctcgtctaagaaagcgaaagact 21128337  T
Q  313 caaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
     || | |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  21128336 aaaggaaaggtggcaacgttcatttgaaaagcactgggtgcttgtccttcattga 21128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 19289243 - 19289375
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||| ||||||||| ||| ||   ||||| |||||||||||||||    
T  19289243 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgcctaagagagcgaaggatcaaaagggaggtgccaacgttca 19289342  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||||||| |||||||||    
T  19289343 tttgaaaagcactgggtgcttgtccttcattga 19289375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 17608076 - 17608247
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||| || | ||||    
T  17608076 agacaaagttgatcattttaaaaggtcttggaagaacaaaagagagcaaatgaatcaacaaaaagagaagcct-aaagcatctgaagaaaactacgtctg 17608174  T
Q  118 aag-tctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagcaaatccgtcagaagc 184  Q
    ||| | | ||||||  |||||| |||||||| ||     ||||||||||||||||||||| | | ||||||||    
T  17608175 aagttttgaagtgctcctgaagacaaagtgcctctgaagtgatgacgtcatcagaagcaagttcatcagaagc 17608247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 267 - 367
Target Start/End: Complemental strand, 11235800 - 11235700
Alignment:
Q  267 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 366  Q
    ||||||||||| || || | ||||||||||||||||| ||| ||   ||||| | || ||||||||||||||||||||||||||||||||| ||||||||    
T  11235800 aagagctgtctcttaaagtaaacctcgtctaagagagcgaaggatcaaaagggaagttccaacgttcatttgaaaagcactgggtgcttgtccttcattg 11235701  T
Q  367 a 367  Q
    |    
T  11235700 a 11235700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 367
Target Start/End: Complemental strand, 18498949 - 18498821
Alignment:
Q  240 gatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttg 338  Q
    ||||||||||||||| |||||  ||| || ||||||  | || || ||||||||||||||||||| ||| ||   ||||||| ||| |||||||||||||    
T  18498949 gatcagaagattcaatctgaaatctcaaaagagctgaatcttaaagttaacctcgtctaagagagcgaaggatcaaaaggaaagtgacaacgttcatttg 18498850  T
Q  339 aaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||| ||| |||||||    
T  18498849 aaaagcactgggtgcttatacatcattga 18498821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 31931756 - 31931624
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| ||| |  ||| || ||||||| |  | || ||||||||||||||||||||||| ||   ||||| | |||| ||||||||    
T  31931756 agttgatcagaagattcaatctggaatctcaaaagagctgtttcattaagttaacctcgtctaagagagagaaggatcaaaagggaagtgcgaacgttca 31931657  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||||||| | |||||||    
T  31931656 tttgaaaagcactgggtgcttgtccctcattga 31931624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 11206279 - 11206147
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||| ||||||||| |||||  ||| || ||| ||||| || || | ||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  11206279 agttgatcaaaagattcaatctgaaatctcaaaagagttgtctcttaaagtaaacctcgtctaagagagcgaatgatcaaaagggaagtgccaacgttca 11206180  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||| ||||||||||| | |||||||    
T  11206179 tttgaaaagcattgggtgcttgtccatcattga 11206147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 12952993 - 12953125
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaaga-ctcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| ||||||||  | || |  |||||||||||||| |||| ||| || |  |||||   |||||||||||||    
T  12952993 agttgatcagaagattcaatctgaaacctcaaagagctgattctttacgttaacctcgtctaaaagagcgaaggatcaaaaaggggagtgccaacgttca 12953092  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||| ||||||||||| |||||||    
T  12953093 tttgaaaagcactaggtgcttgtacctcattga 12953125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 18555553 - 18555471
Alignment:
Q  285 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||| |||| ||| ||   |||||   |||||||||||||||||||||||||||||||||||||| |||||||    
T  18555553 ttaacctcgtctaaaagagcgaaggatcaaaaggggagtgccaacgttcatttgaaaagcactgggtgcttgtacctcattga 18555471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 19289049 - 19289105
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 93  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||    
T  19289049 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaa 19289105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 241 - 363
Target Start/End: Complemental strand, 20635902 - 20635779
Alignment:
Q  241 atcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttcatttga 339  Q
    |||||||||| |||||| |||  || || || ||| ||||| ||| |||||| ||||||| || |||||||| || | |||||| ||||| |||||||||    
T  20635902 atcagaagatgcaacctaaagtttcaaatagttgtttattggattcaacctcttctaagatagtgaaagactaaaggaaaggtggcaacggttcatttga 20635803  T
Q  340 aaagcactgggtgcttgtacttca 363  Q
    |||||| ||| ||||||| |||||    
T  20635802 aaagcattggatgcttgtccttca 20635779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 14051237 - 14051283
Alignment:
Q  140 caaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaa 186  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  14051237 caaagtgcacctgatgacgtcatcagaagcaagtccatcagaagcaa 14051283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 14069918 - 14069964
Alignment:
Q  140 caaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaa 186  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  14069918 caaagtgcacctgatgacgtcatcagaagcaagtccatcagaagcaa 14069964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 363
Target Start/End: Original strand, 17608240 - 17608397
Alignment:
Q  207 tcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaaga-gctgtctattgaatttaacctcgtctaagagagag 305  Q
    |||||||||||||| || ||||| ||  | ||| |||||||||| ||||||||||  || || | ||||| ||||| ||| |||||| ||||||| || |    
T  17608240 tcagaagctgtatatcaccagaagctata-gttcatcagaagatgcaacctgaagtttcaaataagctgtttattggattcaacctcatctaagaaagcg 17608338  T
Q  306 aaagactcaaaggaaggtgccaacg-ttcatttgaaaagcactgggtgcttgtacttca 363  Q
    ||||||| || | |||||| ||||| |||||||||||||||  || ||||||| |||||    
T  17608339 aaagactaaaggaaaggtggcaacgattcatttgaaaagcatgggatgcttgtccttca 17608397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 19689089 - 19689048
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  19689089 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 19689048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 25675443 - 25675362
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaa-gcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||  |||  | | ||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||    
T  25675443 aacctcgtctaagagaacgaagaattgaaaggaaggtatcaacggtcatttgaaaaagcactgggtgcttgtccttcattga 25675362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 9933585 - 9933660
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| |||||||||||||||||||||||||| ||||    
T  9933585 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaaaagcactgggtgcttgtccttc 9933660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 18378624 - 18378585
Alignment:
Q  39 taggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  18378624 taggtcttggaagaacaaaagagagtaaaggaatcaacaa 18378585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 17048072 - 17048042
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaa 67  Q
    |||||||||||||||||||||||||||||||    
T  17048072 aataggtcttggaagaacaaaagagagcaaa 17048042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 25518932 - 25518891
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||| ||||||||||||||||||||| |||||||||    
T  25518932 caacggtcatctgaaaagcactgggtgcttgtccttcattga 25518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 25679519 - 25679438
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaa-gcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||||| ||||||||||||||| |||||||||    
T  25679519 aacctcgtctaagagaacgaagaattgaaaggtaggtatcaacggtcatttgaaaaagcactgggtgcttgtccttcattga 25679438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 25735472 - 25735553
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaa-gcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||||| ||||||||||||||| |||||||||    
T  25735472 aacctcgtctaagagaacgaagaattgaaagggaggtatcaacggtcatttgaaaaagcactgggtgcttgtccttcattga 25735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 30119972 - 30120053
Alignment:
Q  94 agcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    ||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  30119972 agcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 30120053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 9933356 - 9933392
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  9933356 aataggtcttggaagaacaatagagagcaaaggaatc 9933392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 17741370 - 17741406
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  17741370 aataggtcttggaagaacaatagagagcaaaggaatc 17741406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 17745401 - 17745437
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    ||||||||||||||||||||  |||||||||||||||    
T  17745401 aataggtcttggaagaacaatggagagcaaatgaatc 17745437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 18384002 - 18383970
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  18384002 tggaagaacaaaagagagcaaaggaatcaacaa 18383970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 18499131 - 18499095
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  18499131 aataggtcttggaagaacaatagagagcaaaggaatc 18499095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 363
Target Start/End: Complemental strand, 22386990 - 22386862
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttca 334  Q
    |||| |||||||||| |||||| |||  || || |||||| ||||| ||| |||||| ||||||| || ||| |||| || | ||||||  |||| ||||    
T  22386990 agttcatcagaagatgcaacctaaagtttcaaatagctgtttattggattcaacctcttctaagaaagcgaacgactaaaggaaaggtggaaacggttca 22386891  T
Q  335 tttgaaaagcactgggtgcttgtacttca 363  Q
    ||||||| ||| ||| ||||||| |||||    
T  22386890 tttgaaaggcattggatgcttgtccttca 22386862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 18 - 367
Target Start/End: Original strand, 8998648 - 8998997
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  8998648 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctg 8998747  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  8998748 aagtctgaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaagcaaatccttcataagcaagaccttcagaagccaattgttcagaagctgt 8998847  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||||| ||||    
T  8998848 ataacattagaaactgcaagttgatcagaagattcaacctgaagtctctaagagctgtctattggatttaacctcgtctaagaaagtgaaagactaaaag 8998947  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  8998948 gaaggtgccaacgttcatttgaaaagcattgggtgcttgtctttcattga 8998997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 368
Target Start/End: Original strand, 13174320 - 13174669
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||| ||||||||||| ||||    
T  13174320 agacaaagttaatcaatttaataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctacaagcatctgaagaaatctgcctctg 13174419  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  13174420 aagttgaaagtgcttctgaagccaaaatgcatctaatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagctaattgttcagaagctgt 13174519  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    ||| |||||||| ||| ||||||||||||||||||||||||||| ||| || |||||||||||| ||| |||||||||||||| ||||||||||| || |    
T  13174520 atatcatcagaaactg-aagttgatcagaagattcaacctgaagtctcaaatagctgtctattggattcaacctcgtctaagaaagagaaagactaaagg 13174618  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    |||||||||||||||| ||||||||||| ||||||||| | ||||||||||    
T  13174619 gaaggtgccaacgttcgtttgaaaagcattgggtgcttctccttcattgag 13174669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 18 - 367
Target Start/End: Original strand, 11086774 - 11087108
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||||| ||||    
T  11086774 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatatgaagaaatctgcctctg 11086873  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  ||||||||||| |||||||| ||||| |||||||||||               ||||||||||||||||||||||||| ||||||||||||| |    
T  11086874 aagttgaaagtgcgtctaaagccaaaatgcatttgatgacgtca---------------tcagaagcaagaccttcagaagccaattgttcagaagctat 11086958  T
Q  218 at-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa 316  Q
    || |||| || || ||| ||||||||||| |||||||| ||||||  || || |||||||||||| ||| ||||||||| |||| |  |||||||| |||    
T  11086959 ataaacaccataaactg-aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtcaaagaaaacgaaagactaaaa 11087057  T
Q  317 ggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||| ||||||||| ||||||||||| ||||||||||| |||||||||    
T  11087058 ggaaggtaccaacgttcgtttgaaaagcattgggtgcttgtccttcattga 11087108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 19710793 - 19710933
Alignment:
Q  42 gtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagcca 141  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| || |||||||| |||||||| |||| |||  ||||||  |    
T  19710793 gtcttggaagaacaaaagagagcaaatgaatcaacaaaaagagaagcct-aaagcatctgaaaaaatctgcctctgaagt-taaaatgctcctgaagata 19710890  T
Q  142 aagtgcatctgatgacgtcatcagaagcaaatccgtcagaagc 184  Q
     ||| || |||||||||||||||||||||| ||  ||||||||    
T  19710891 cagtacacctgatgacgtcatcagaagcaagtctatcagaagc 19710933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 357
Target Start/End: Original strand, 24882352 - 24882474
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||||||| |  | || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  24882352 agttgatcagaagattcaatctgaaatctcaaaagagctgtttcattaagttaacctcgtctaagagagcgaacgatcaaaagggaagtgccaacgttca 24882451  T
Q  335 tttgaaaagcactgggtgcttgt 357  Q
    ||||||||||| |||||||||||    
T  24882452 tttgaaaagcaatgggtgcttgt 24882474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 29590312 - 29590229
Alignment:
Q  284 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| ||||||||| |||  ||| || | ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  29590312 tttaatctcgtctaaaagaacgaaggattaaaagggaggtaccaacgttcatttgaaaagcactgggtgcttgtccttcattga 29590229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 13682640 - 13682562
Alignment:
Q  284 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    |||||||||||||||||||  |||  | | ||||| |||| |||||||||||||||||| |||||||||||||| ||||    
T  13682640 tttaacctcgtctaagagaacgaagaattaaaagggaggtaccaacgttcatttgaaaatcactgggtgcttgtccttc 13682562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 3476351 - 3476399
Alignment:
Q  314 aaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  3476351 aaagggaggtaccaacgttcatttgaaaagcactgggtgcttgtccttc 3476399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 9709625 - 9709663
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  9709625 aggtcttggaagaacaatagagagcaaatgaatcaacaa 9709663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 26209571 - 26209612
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  26209571 caacggtcatttgaaaagcactgggtgcttgtccttcattga 26209612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 29590554 - 29590518
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29590554 aataggtcttggaagaacaatagagagcaaatgaatc 29590518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 8933837 - 8933762
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| |||||||||||||||||||||||||| ||||    
T  8933837 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaaaagcactgggtgcttgtccttc 8933762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 485
Target Start/End: Original strand, 30220778 - 30220852
Alignment:
Q  411 ttggcttcttggaaatggtgaaaagattaatttctggaatgatagttggtgtggtgcccccctctctcaggcctt 485  Q
    |||||| ||||| |||||| |||| || | ||||||||||||||| |||||||| || ||||| ||||| |||||    
T  30220778 ttggctccttggtaatggtcaaaatatcagtttctggaatgatagctggtgtggagcacccctttctcaagcctt 30220852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 44281002 - 44280921
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga-----tgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||     |||||||||||||||||    
T  44281002 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 44280921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 13880473 - 13880432
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  13880473 aataggttctggaagaacaaaagagagcaaaggaatcaacaa 13880432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 15088858 - 15088817
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  15088858 aataggttctggaagaacaaaagagagcaaaggaatcaacaa 15088817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 30026260 - 30026219
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  30026260 aataggttatggaagaacaaaagagagcaaaggaatcaacaa 30026219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 2913419 - 2913451
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  2913419 tggaagaacaaaagagagcaaaggaatcaacaa 2913451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 3476078 - 3476114
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3476078 aataggtcttggaagaacaatagagagcaaaggaatc 3476114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 8934066 - 8934030
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  8934066 aataggtcttggaagaacaatagagagcaaaggaatc 8934030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 10882971 - 10883003
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  10882971 tggaagaacaaaagagagcaaaggaatcaacaa 10883003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 12733921 - 12733957
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  12733921 aataggtcttggaagaacaatagagagcaaaggaatc 12733957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 12734189 - 12734225
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  12734189 caacggtcatttgaaaagcactgggtgcttgtccttc 12734225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 13730508 - 13730540
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  13730508 tggaagaacaaaagagagcaaaggaatcaacaa 13730540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 26209303 - 26209339
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  26209303 aataggtcttggaagaacaatagagagcaaaggaatc 26209339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 48382424 - 48382388
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  48382424 caacggtcatttgaaaagcactgggtgcttgtccttc 48382388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 51988780 - 51989127
Alignment:
Q  23 aagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaa---acctaaaagcatctcaagaaatctgcatctgaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||| |||||||| |||||||| |||| ||||    
T  51988780 aagttgatcaacataataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaagaaacctagaagcatctgaagaaatcagcatttgaa 51988879  T
Q  120 gtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtat 219  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51988880 gtctaaagtgcgtctgaagccaaaatgcatatgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaacccatttgttcagaagctgtat 51988979  T
Q  220 aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaagga 319  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  51988980 aacatcagaaactgcaagttgattagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactaaaagga 51989079  T
Q  320 aggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  51989080 aggtgccaacgttcatttgaaaagcactgggtgcttgtccttcattga 51989127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 22 - 368
Target Start/End: Complemental strand, 17022426 - 17022081
Alignment:
Q  22 aaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    |||||| |||||  ||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||| ||||||||||| || |||||    
T  17022426 aaagttaatcaatttaataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctagaagcatctgaagaaatctgcctcggaagt 17022327  T
Q  122 ctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataa 221  Q
      ||||||| ||||||||| || ||||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  17022326 tgaaagtgcttctgaagcctaaatgcatttgatgacgtcatcagaagcaaatctatcagaagcaagaacttcagaagccaactgttcagaagctgtataa 17022227  T
Q  222 catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaag 321  Q
    ||||| || ||| |||||||||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || |||||    
T  17022226 catcaaaaactg-aagttgatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaagggaag 17022128  T
Q  322 gtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    |||||||||||| ||||||||||| | ||||||||| ||||||||||    
T  17022127 gtgccaacgttcgtttgaaaagcattaggtgcttgtccttcattgag 17022081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 36 - 368
Target Start/End: Complemental strand, 13148652 - 13148320
Alignment:
Q  36 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 135  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||  ||||||| ||||    
T  13148652 taataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaatctgcctctgaagttgaaagtgcttctg 13148554  T
Q  136 aagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagctgtataacatcagaatctgc 234  Q
    |||||||| |||||||||||||||||||| |||  | |   ||||||||||| |||||||||||| ||||| |||||||||||||| |  ||||| |||     
T  13148553 aagccaaaatgcatctgatgacgtcatcaaaagtgagtttatcagaagcaagtccttcagaagccaatttgatcagaagctgtatatcgccagaaactg- 13148455  T
Q  235 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 333  Q
    |||||||||||||||| ||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| ||||| |||    
T  13148454 aagttgatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacgattc 13148355  T
Q  334 atttgaaaagcactgggtgcttgtacttcattgag 368  Q
    ||||||| |||  ||||||||||| ||||| ||||    
T  13148354 atttgaatagctttgggtgcttgtccttcaatgag 13148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 22151651 - 22151300
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |||||| ||||| ||||| | |    
T  22151651 agacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacctaaa-gcatctgaagaattctgccttt 22151553  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcca-tttgttcagaagct 215  Q
    |||||  ||||||| |||||||||||| |||||||||||| |||||||||||  | |   ||||||||||||||||||||||||| |||| |||||||||    
T  22151552 gaagttgaaagtgcttctgaagccaaaatgcatctgatgatgtcatcagaagtgagtttatcagaagcaagaccttcagaagccaatttgatcagaagct 22151453  T
Q  216 gtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaa 315  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||  || || |||||| | ||| ||| |||||||||||||| || |||||||| ||    
T  22151452 gtataacaccagaaactg-aagttgatcagaagattcaacctgaagtttcaaatagctgttttttggattcaacctcgtctaagaaagcgaaagactaaa 22151354  T
Q  316 aggaaggtgccaac-gttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
     | |||||| |||| |||||||||||||||| ||||||||||| ||||| ||||    
T  22151353 ggaaaggtggcaacggttcatttgaaaagcattgggtgcttgtccttcaatgag 22151300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 21 - 367
Target Start/End: Original strand, 31113615 - 31113970
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaa-tcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaa 119  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||  || ||| ||||||||| |||||||| |||||| |||||| |||| ||||||    
T  31113615 caaagttgatcaatttaataggtcttggaagaacaaaagaaagcaaaaaaaatcatcaagaagaggaacctaaa-gcatctgaagaaaactgcgtctgaa 31113713  T
Q  120 gtcta-aagtgcgtctgaagcca-aagtgcatctga-----tgacgtcatcagaagcaaatc-cgtcagaagcaagac-cttcagaagccatttgttcag 210  Q
    || |  |||||| |||||||    |||||| |||||     ||||||||||||||||| | | | ||||||| || |  | |||||||| | ||  ||||    
T  31113714 gttttgaagtgcttctgaagtttcaagtgcctctgaagtaatgacgtcatcagaagcagaactcatcagaagaaaaattcatcagaagcaacttcatcag 31113813  T
Q  211 aagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaag 309  Q
    ||||| ||| | || ||||| || || |||||||||||||||||| |||||  ||| ||  ||||| ||||| ||||||||||||||||||||| |||||    
T  31113814 aagctatatcatcaccagaagctaca-gttgatcagaagattcaatctgaaagctcaaatggctgtttattggatttaacctcgtctaagagagcgaaag 31113912  T
Q  310 actcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||| ||||| | ||| ||| |||||||||||||||||| ||||||||| |||||||||    
T  31113913 actaaaagggaagtgacaatgttcatttgaaaagcactaggtgcttgtccttcattga 31113970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 177 - 367
Target Start/End: Complemental strand, 41045989 - 41045798
Alignment:
Q  177 tcagaagcaagaccttcagaagccatttgttcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgt 275  Q
    |||||||||||||| ||| |||| | ||||||||||||| ||||| |||||||| ||| ||||||||||| |||||||||||||||  || || ||||||    
T  41045989 tcagaagcaagaccctcataagctaattgttcagaagctatataatcatcagaaactg-aagttgatcaggagattcaacctgaagtttcaaatagctgt 41045891  T
Q  276 ctattgaatttaacctcgtctaagagagagaaagactcaaa-ggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||| || ||| |||||| ||||||| || |||||||| ||| ||||| |||||||||||  ||||||||||||||||| |||| |||||||||    
T  41045890 ctagtggattcaacctcatctaagaaagcgaaagactaaaagggaagatgccaacgttcgcttgaaaagcactgggtgtttgtccttcattga 41045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 41046115 - 41046017
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||| |||||||| |||||||||||||||    
T  41046115 agacaaagttgatcaatttaataggtcttggaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctataagcatctgaagaaatctgcatct 41046017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 10529724 - 10529565
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| ||||| |||||| |||| | ||    
T  10529724 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagatatcaacaagaagagaagcctaaaa-catctgaagaaaactgcgtgtg 10529626  T
Q  118 aag-tctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagcaaa 172  Q
    ||| | |  |||||  |||||| |||||||| ||     ||||||||||||||||||||||    
T  10529625 aagttatggagtgctcctgaagacaaagtgcctctgaagtgatgacgtcatcagaagcaaa 10529565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 341
Target Start/End: Original strand, 12752391 - 12752689
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaag-tgcgtctgaag 138  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||||||| |||||||| ||||| ||   || |||    
T  12752391 aggtcttggaagaacaaaagagagcaaaagaatcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt-taaagatgttcctaaag 12752488  T
Q  139 ccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaatctgcaagt 238  Q
      ||| |||  |||||||||||||||||||| | | | | |||||||||   ||||| ||| | |   ||||||||||||||||| ||||| ||| || |    
T  12752489 ttaaaatgctcctgatgacgtcatcagaagcgagttcattagaagcaag---ttcagtagcaagtctatcagaagctgtataacaccagaaactgtaa-t 12752584  T
Q  239 tgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtct-aagagagagaaagactcaaaggaaggtgccaac-gttcatt 336  Q
    | |||||||||| |||||| |||  || || || ||| || || ||| || ||||||| |||| || |||||||| || | |||||| |||| |||||||    
T  12752585 tcatcagaagatgcaacctaaagtttcaaatagttgtttaatggattcaaactcgtctaaagaaagcgaaagactaaaggaaaggtggcaacggttcatt 12752684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 11908755 - 11908835
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  11908755 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 11908835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 10529526 - 10529400
Alignment:
Q  241 atcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa 340  Q
    |||||||||| |||||| |||  || || |||||  ||||| ||| ||||||||||| || || |||||||| ||||||| |||||||||||| ||||||    
T  10529526 atcagaagatgcaacctaaagtttcaaatagctggttattggattcaacctcgtctaggaaagcgaaagact-aaaggaaagtgccaacgttcgtttgaa 10529428  T
Q  341 aagcactgggtgcttgtacttcattgag 368  Q
    ||||| ||||||||||| ||||||||||    
T  10529427 aagcattgggtgcttgtccttcattgag 10529400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 21736493 - 21736361
Alignment:
Q  236 agttgatcagaagattcaacctgaagactct---aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgtt 332  Q
    ||||||||||||||||||| ||  ||| |||   ||||||||| | || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||    
T  21736493 agttgatcagaagattcaatct--agaatctcaaaagagctgtttctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgtt 21736396  T
Q  333 catttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||||||||| | |||||||    
T  21736395 catttgaaaagcactgggtgcttgtccctcattga 21736361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 2246701 - 2246618
Alignment:
Q  284 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||  ||| || | ||||| |||| ||||||||||||||||||||||| |||| |||| |||||||||    
T  2246701 tttaacctcgtctaagagaacgaaggattaaaagggaggtaccaacgttcatttgaaaagcactaggtgtttgtccttcattga 2246618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 51341419 - 51341339
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||| ||| ||||||||| || |||||||| | ||||||    
T  51341419 aggtcttggaagaacaaaagagagcaaaagaattaacaaaaagagaagcct-aaagcatctgaaaaaatctgcctttgaagt 51341339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 27173162 - 27173092
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgt 357  Q
    |||||| ||||| |||| ||||||   ||||| ||||||||||| ||||||||||||||||||||||||||    
T  27173162 aacctcatctaaaagagcgaaagatcaaaagggaggtgccaacggtcatttgaaaagcactgggtgcttgt 27173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 49990641 - 49990569
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 113  Q
    ||||||||||||||||| ||||||||||  | ||||||| ||||||| ||| ||||||||| ||||||||||||    
T  49990641 aggtcttggaagaacaatagagagcaaaaaattcaacaaaaagagaagcct-aaagcatctaaagaaatctgca 49990569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 356
Target Start/End: Original strand, 15650972 - 15651043
Alignment:
Q  285 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttg 356  Q
    |||||||||||||||| || ||| ||   ||||||| ||||||||| || ||||||||||||||||||||||    
T  15650972 ttaacctcgtctaagaaagcgaaggatcaaaaggaaagtgccaacggtcctttgaaaagcactgggtgcttg 15651043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 27173400 - 27173318
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    |||||||||||||||||||||||||||||||  || || ||| ||||| || |||||| ||||| |||||| |||| |||||||    
T  27173400 aataggtcttggaagaacaaaagagagcaaagaaaccatcaaaaagaggaatctaaaa-catctgaagaaaactgcgtctgaag 27173318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 37412943 - 37412842
Alignment:
Q  92 aaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagcaaatc-cgtcagaagca 185  Q
    ||||| ||| |||||| ||||||||||||| | ||||||  |||||| |||||||| ||     |||||||||||||||||||||| | |||||||||||    
T  37412943 aaagcttctgaagaaaactgcatctgaagtttgaagtgctcctgaagacaaagtgcctctgaagtgatgacgtcatcagaagcaaagctcgtcagaagca 37412844  T
Q  186 ag 187  Q
    ||    
T  37412843 ag 37412842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 51341301 - 51341186
Alignment:
Q  141 aaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaatctgcaagttg 240  Q
    |||||||| ||||||||||||| |||||||| |   ||||||||||| |  |||||||| ||||  |||||||||||||| ||  |||| |||  ||||     
T  51341301 aaagtgcacctgatgacgtcattagaagcaagtttatcagaagcaagtctatcagaagctatttcatcagaagctgtatatcactagaaactg-tagttc 51341203  T
Q  241 atcagaagattcaacct 257  Q
    |||||||||| ||||||    
T  51341202 atcagaagatgcaacct 51341186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 13199143 - 13199226
Alignment:
Q  284 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||  ||   | | ||||| |||| |||||| ||||||||||||||||||||| |||| |||| ||||    
T  13199143 tttaacctcgtctaagagaacgatgaattaaaagggaggtaccaacggtcatttgaaaagcactgggtgtttgtccttctttga 13199226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 356
Target Start/End: Original strand, 15662607 - 15662678
Alignment:
Q  285 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttg 356  Q
    |||||||||||||||| || ||| ||   ||||||| |||| |||| || ||||||||||||||||||||||    
T  15662607 ttaacctcgtctaagaaagcgaaggatcaaaaggaaagtgcgaacggtcgtttgaaaagcactgggtgcttg 15662678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 934149 - 934067
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  934149 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 934067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 20627269 - 20627307
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  20627269 aggtcttggaagaacaatagagagcaaaggaatcaacaa 20627307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 29460927 - 29461008
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  29460927 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 29461008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 29471779 - 29471860
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  29471779 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 29471860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 485
Target Start/End: Original strand, 32021176 - 32021250
Alignment:
Q  411 ttggcttcttggaaatggtgaaaagattaatttctggaatgatagttggtgtggtgcccccctctctcaggcctt 485  Q
    |||||| ||||| |||||| |||| || | ||||||||||||||| |||||||| || ||||| ||||| |||||    
T  32021176 ttggctccttggtaatggtcaaaatatcagtttctggaatgatagctggtgtggagcacccctttctcaagcctt 32021250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 47208079 - 47208041
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  47208079 aggtattggaagaacaatagagagcaaatgaatcaacaa 47208041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 49990539 - 49990446
Alignment:
Q  133 ctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaa 229  Q
    |||||| |||| |||| |||||||||||||||||||||| |   | ||||||||| |  |||||||| ||||  |||||||||||||| || |||||    
T  49990539 ctgaagacaaaatgcacctgatgacgtcatcagaagcaagt---ttagaagcaagtctatcagaagctatttcatcagaagctgtatatcaccagaa 49990446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 363
Target Start/End: Complemental strand, 15833619 - 15833463
Alignment:
Q  207 tcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagaga 306  Q
    ||||||||||| || || ||||| || || ||| |||||||||| |||||| |||  || || || ||| ||||| ||| |||||  ||||||| || ||    
T  15833619 tcagaagctgtgtatcaccagaagctaca-gttcatcagaagatgcaacctaaagtttcaaatagttgtttattggattcaacctattctaagaaagcga 15833521  T
Q  307 aagactcaaaggaaggtgccaacg-ttcatttgaaaagcactgggtgcttgtacttca 363  Q
    |||||| || | |||||| ||||| ||||||||||| ||| ||| ||||||| |||||    
T  15833520 aagactaaaggaaaggtggcaacggttcatttgaaaggcattggatgcttgtccttca 15833463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 2246944 - 2246908
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  2246944 aataggtcttggaagaacaatagagagcaaaggaatc 2246908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 11908864 - 11908900
Alignment:
Q  133 ctgaagccaaagtgcatctgatgacgtcatcagaagc 169  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  11908864 ctgaagacaaagtgcacctgatgacgtcatcagaagc 11908900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 13198899 - 13198935
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  13198899 aataggtcttggaagaacaatagagagcaaaggaatc 13198935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 14581708 - 14581672
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  14581708 aataggtcttggaagaacaatagagagcaaaggaatc 14581672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 14969677 - 14969645
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||| ||||||||||||||||||||    
T  14969677 tggaagaacaaacgagagcaaatgaatcaacaa 14969645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 23680073 - 23680109
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  23680073 aataggtcttggaagaacaatagagagcaaaggaatc 23680109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 24052310 - 24052346
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  24052310 aataggtcttggaagaacaatagagagcaaaggaatc 24052346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 31303752 - 31303720
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  31303752 tggaagaacaaaagagagcaaaagaatcaacaa 31303720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 41495337 - 41495305
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  41495337 tggaagaacaaaagagagcaaaggaatcaacaa 41495305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 47405243 - 47405279
Alignment:
Q  42 gtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  47405243 gtcttggaagaacaatagagagcaaaggaatcaacaa 47405279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 367
Target Start/End: Original strand, 21025180 - 21025529
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||| | ||||||||||||| ||    
T  21025180 agacaaagttgatcaacataataggtcttggaacaacaaaagagagcaaaggaatcaacaagaagataaacctagaagcatatgaagaaatctgcatatg 21025279  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||    
T  21025280 aagtctaaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaagcaaatccgtcaaaagcaagacctttagaagccaattgttcagaagctgt 21025379  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    |||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||||| ||| |||||||||||||| || |||||||| ||||    
T  21025380 ataacatcagaaactgcaagttgatcagaagattcaacctgatgtttctaagagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaag 21025479  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  21025480 gaaggtgccaacgttcatttgaaaagcattgggtgcttgtccttcattga 21025529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 18 - 357
Target Start/End: Original strand, 24814273 - 24814623
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||||| |||    
T  24814273 agacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaa-gcatctgaagaaatctgcttct 24814370  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagccattt 204  Q
    |||||  |||||||  ||||||||||| ||||||||||||||||||||||||  |    ||| |        |||| |||||| ||||||||||||||||    
T  24814371 gaagttgaaagtgctcctgaagccaaaatgcatctgatgacgtcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagccattt 24814470  T
Q  205 gttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagaga 304  Q
    | |||||||||||||| || ||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| ||||||| ||     
T  24814471 gatcagaagctgtatatcaccagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttctaagatagc 24814569  T
Q  305 gaaagactcaaaggaaggtgccaac-gttcatttgaaaagcactgggtgcttgt 357  Q
    |||||||| || | |||||| |||| |||||||||||||||| |||||||||||    
T  24814570 gaaagactaaaggaaaggtggcaacggttcatttgaaaagcattgggtgcttgt 24814623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 36 - 357
Target Start/End: Original strand, 24793717 - 24794048
Alignment:
Q  36 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 135  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||||| ||||||||  |||||||  |||    
T  24793717 taataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaa-gcatctgaagaaatctgcctctgaagttgaaagtgctcctg 24793814  T
Q  136 aagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagccatttgttcagaagctgtataaca 223  Q
    |||||||| ||||||||||||||||||||||||  |    ||| |        |||| |||||| ||||||||||||||||| ||||||| |||||| ||    
T  24793815 aagccaaaatgcatctgatgacgtcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagccatttgatcagaagttgtatatca 24793914  T
Q  224 tcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggt 323  Q
     ||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| | ||||| || |||||||| ||   |||||    
T  24793915 ccagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttttaagatagcgaaagactaaagaaaaggt 24794013  T
Q  324 gccaac-gttcatttgaaaagcactgggtgcttgt 357  Q
    | |||| |||||||||||||||| |||||||||||    
T  24794014 ggcaacggttcatttgaaaagcattgggtgcttgt 24794048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 236 - 357
Target Start/End: Original strand, 20646478 - 20646600
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||||||| ||  || || ||| ||||| ||| ||||||||||||||||||||| ||| |||| ||||| ||||||||||||| |    
T  20646478 agttgatcagaagattcaacctggagtttcaaaagagttgtcttttggatttaacctcgtctaagagagcgaaggactaaaagggaggtgccaacgttaa 20646577  T
Q  335 tttgaaaagcactgggtgcttgt 357  Q
    |||||||||||||||||||||||    
T  20646578 tttgaaaagcactgggtgcttgt 20646600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 367
Target Start/End: Original strand, 19299912 - 19300012
Alignment:
Q  267 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 366  Q
    ||||| ||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  19299912 aagagttgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatttgaaaagcactgggtgtttgtccttcattg 19300011  T
Q  367 a 367  Q
    |    
T  19300012 a 19300012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 367
Target Start/End: Original strand, 19312919 - 19313019
Alignment:
Q  267 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 366  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||   ||||| | ||  ||||||||||||||||||||||| |||||||| ||||||||    
T  19312919 aagagctgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggatgtttcaacgttcatttgaaaagcactgtgtgcttgtccttcattg 19313018  T
Q  367 a 367  Q
    |    
T  19313019 a 19313019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 23392387 - 23392463
Alignment:
Q  18 agacaaagttgatcaa-cataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 93  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||    
T  23392387 agacaaagttgatcaatcttaataggtcttggaagaacaaaagagagcaaaagaatcaacaaaaggagaagcctaaa 23392463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 20646239 - 20646337
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    |||||||||||||   ||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||| ||||||||| |||||| |||| |||||||    
T  20646239 caaagttgatcaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaataagaggaacct-aaagcatctgaagaaaactgcgtctgaag 20646337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 22755869 - 22755767
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||||  ||||| ||||||||  ||||| ||||||||| |||||| || | ||||    
T  22755869 agacaaagttgatcaatttaataggtcttggaagaacaaacgagagcaaagaaatcatcaagaagaagaacct-aaagcatctgaagaaaactacgtctg 22755771  T
Q  118 aagt 121  Q
    ||||    
T  22755770 aagt 22755767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 19312659 - 19312752
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgc 112  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| ||||    
T  19312659 agacaaagttgaccaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgc 19312752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 1084426 - 1084346
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||| ||||||  ||| ||||||||    
T  1084426 aggtcttggaagaacaaaagagagcaaaggaatcagcaagaagagaagcct-aaagcatctgaagaaaattgcctctgaagt 1084346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 19497940 - 19497993
Alignment:
Q  314 aaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  19497940 aaagggaggtgccaacgttcatttgaaaagcactgggtgcttgtccttcattga 19497993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 19297317 - 19297399
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| ||| || |||| |||||||    
T  19297317 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaaggaaactgcgtctgaag 19297399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 367
Target Start/End: Complemental strand, 19356647 - 19356546
Alignment:
Q  267 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttg-aaaagcactgggtgcttgtacttcatt 365  Q
    ||||||||| | || || ||||||||||||||||||| ||| ||   ||||| | ||||||||||||||||| ||||||||||||||||||| | |||||    
T  19356647 aagagctgtttctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttcatttgaaaaagcactgggtgcttgtccctcatt 19356548  T
Q  366 ga 367  Q
    ||    
T  19356547 ga 19356546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 967464 - 967505
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  967464 caacggtcatttgaaaagcactgggtgcttgtccttcattga 967505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 24275293 - 24275252
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  24275293 caacggtcatttgaaaagcactgggtgcttgtccttcattga 24275252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 18768638 - 18768720
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  18768638 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 18768720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 28721048 - 28721130
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  28721048 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagca 28721130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 28731636 - 28731718
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  28731636 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagca 28731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 9015104 - 9015145
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  9015104 aataggttctggaagaacaaaagagagcaaaggaatcaacaa 9015145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 13963743 - 13963784
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  13963743 aataggttctggaagaacaaaagagagcaaaggaatcaacaa 13963784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 17969170 - 17969211
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| ||||||||||||||||||||||| || |||||||||    
T  17969170 caacggtcatttgaaaagcactgggtgctcgtccttcattga 17969211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 22763962 - 22763881
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa-aagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||    
T  22763962 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaagaagcactgggtgcttgtccttcattga 22763881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 22774666 - 22774585
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa-aagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||    
T  22774666 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaagaagcactgggtgcttgtccttcattga 22774585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 22780044 - 22779963
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa-aagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||    
T  22780044 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaagaagcactgggtgcttgtccttcattga 22779963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 17968883 - 17968919
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  17968883 aataggtcttggaagaacaatagagagcaaaggaatc 17968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 19497683 - 19497719
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  19497683 aataggtcttggaagaacaatagagagcaaaggaatc 19497719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 19540763 - 19540719
Alignment:
Q  39 taggtcttggaagaacaaaagagagcaaatgaatcaacaagaaga 83  Q
    ||||| |||||||||||||||||||| || |||||||||| ||||    
T  19540763 taggttttggaagaacaaaagagagctaaggaatcaacaaaaaga 19540719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 21172181 - 21172241
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga 153  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  ||||||||||||    
T  21172181 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctga 21172241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 24275577 - 24275541
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  24275577 aataggtcttggaagaacaatagagagcaaaggaatc 24275541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 25829462 - 25829430
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  25829462 tggaagaacaaaagagagcaaaggaatcaacaa 25829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 38781738 - 38781706
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||||||| |||||||||||    
T  38781738 tggaagaacaaaagagagcaattgaatcaacaa 38781706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 367
Target Start/End: Complemental strand, 23065338 - 23065004
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  23065338 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatcagcatctg 23065239  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||               |||||||||||||||||||||||||||||||    
T  23065238 aagtctaaagtgcgtctgaagccaaaatgcatctaatgacgtcatcagaagcaa---------------gaccttcagaagccatttgttcagaagctgt 23065154  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  23065153 ataacatcagaaactgcaagttgattagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactaaaag 23065054  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23065053 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtccttcattga 23065004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 19038391 - 19038066
Alignment:
Q  23 aagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtc 122  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| | |||||||| |||||| |||||    
T  19038391 aagttgatcaacataataggtcttggaagaacaaaagaaagcaaaggaatcaacaagaagagaaacctagaagcatatgaagaaatcagcatctaaagtc 19038292  T
Q  123 taaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataac 222  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||                |||||||||||||||||||||||||||||||||||    
T  19038291 taaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaagcaat---------------accttcagaagccatttgttcagaagctgtataac 19038207  T
Q  223 atcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaagg 322  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||    
T  19038206 atcagaatctgcaagttgatcagaatattcaacctgaagactctaagagctgtctattggatttaaccttgtctaagagagcgaaagactaaaaggaagg 19038107  T
Q  323 tgccaacgttcatttgaaaagcactgggtgcttgtacttca 363  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  19038106 tgccaacgttcatttgaaaagcactgggtgcttgtccttca 19038066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 18 - 357
Target Start/End: Complemental strand, 22019740 - 22019401
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  22019740 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaaagcatctgaagaaatctgcctctg 22019641  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  |||| || |||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||| |    
T  22019640 aagttgaaagggcttctgaagccaaaatgcatctgatgacgtcatcagaagcgaatctatcagaagcaagaccttcagaagccaattgttcagaagctat 22019541  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    ||| || |||||  || |||||||||||||||||||||||||||  || || |||||||||||||||| |||||||||||||| || |||||||| || |    
T  22019540 atatcaccagaaattg-aagttgatcagaagattcaacctgaagtttcaaatagctgtctattgaattcaacctcgtctaagaaagcgaaagactaaagg 22019442  T
Q  318 gaaggtgccaac-gttcatttgaaaagcactgggtgcttgt 357  Q
    ||||||| | || |||||||||||||||| |||||||||||    
T  22019441 gaaggtggctactgttcatttgaaaagcattgggtgcttgt 22019401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 28380398 - 28380048
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||| ||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  28380398 agacaaacttgatcaatttaataggtcttagaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctg 28380299  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||| ||||| | |    
T  28380298 aagttgaaagtgcgtctgaagccagaatgcatctgatgacgtcatcagaagcaaatctatcataagcaagaccttcagaagccaattgtttagaagttat 28380199  T
Q  218 at-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa 316  Q
    || |||| ||||| ||| ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| ||     
T  28380198 ataaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagactaaag 28380100  T
Q  317 ggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    |||| |||||||||||| ||||||||||| || |||||||| |||| |||||    
T  28380099 ggaatgtgccaacgttcgtttgaaaagcattgagtgcttgtccttctttgag 28380048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 64 - 367
Target Start/End: Complemental strand, 5930046 - 5929758
Alignment:
Q  64 caaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatc 163  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  5930046 caaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctgaagtttaaagtgcgtctgaaggcaaagtgcatctgatgacatcatc 5929947  T
Q  164 agaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagac 263  Q
    ||||||||               |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  5929946 agaagcaa---------------gaccttcagaagccatttgttcagaagctgtacaacatcagaatctgcaagttgataagaagattcaacctgaagac 5929862  T
Q  264 tctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttca 363  Q
    |||||||| ||||||||| |||||| ||||||||||||||  ||||||  | ||||||| |||||||||||||||||||||||||||||||||| ||| |    
T  5929861 tctaagagttgtctattggatttaaactcgtctaagagagcaaaagacaaagaggaaggcgccaacgttcatttgaaaagcactgggtgcttgtccttta 5929762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 18 - 362
Target Start/End: Original strand, 26547932 - 26548277
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||    
T  26547932 agacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaatctgcctct 26548030  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagct 215  Q
    |||||  ||||||| |||||||||||| |||||||| |||||||||||||||  | |   |||||||||||||||||||||||| ||||| |||||||||    
T  26548031 gaagttgaaagtgcttctgaagccaaaatgcatctgctgacgtcatcagaagtgagtttatcagaagcaagaccttcagaagccaatttgatcagaagct 26548130  T
Q  216 gtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaa 315  Q
    |||||||| ||||| ||| |||||||| |||||||||||||  |||  || || |||||||||||| ||| |||||||||||||| || |||||||| ||    
T  26548131 gtataacaccagaaactg-aagttgataagaagattcaaccgaaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaa 26548229  T
Q  316 aggaaggtgccaac-gttcatttgaaaagcactgggtgcttgtacttc 362  Q
    ||||||||| || | |||||||||||||||| ||||||||||| ||||    
T  26548230 aggaaggtggcagcagttcatttgaaaagcattgggtgcttgtccttc 26548277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 18 - 367
Target Start/End: Complemental strand, 44201381 - 44201067
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||   |||||||| ||||||||                |    
T  44201381 agacaaagttgatcaac-taataggtcttggaagaacaaaagagaggaaatgaatcaacaaga---gaaacctagaagcatct----------------g 44201302  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||    
T  44201301 aagtttaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa---------------gaccttcagaagccatttgttcagaagctgt 44201217  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |||||||  | ||    
T  44201216 acaacatcagaatctgcaagttgataagaagattcaacctgaagactctaagagttgtctattggatttaaactcgtctaagagagcgaaagacaaagag 44201117  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  44201116 gaaggcgccaacgttcatttgaaaagcactgagtgcttgtccttcattga 44201067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 69 - 279
Target Start/End: Complemental strand, 20255419 - 20255209
Alignment:
Q  69 gaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaag 168  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  20255419 gaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctgaagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaag 20255320  T
Q  169 caaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaa 268  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||    
T  20255319 caaatccttcagaagcaagaccttcagaagccaattgttcagaagctgtataacaccagaaactgcaagttgatcagaagattcaatctgaagtctttaa 20255220  T
Q  269 gagctgtctat 279  Q
    ||| |||||||    
T  20255219 gagttgtctat 20255209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 18 - 363
Target Start/End: Complemental strand, 22655883 - 22655536
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||||||| | |    
T  22655883 agacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatttgaagaaatctgcctat 22655785  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagct 215  Q
    |||||  | |||||  ||||||||||| ||||||||||||||||||||||||  | |   | ||||||||| |||||||||||| ||||| |||||||||    
T  22655784 gaagttgagagtgctcctgaagccaaaatgcatctgatgacgtcatcagaagtgagtttattagaagcaagtccttcagaagccaatttgatcagaagct 22655685  T
Q  216 gtataacatc-agaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 314  Q
    ||||| || | |||| ||| |||||||||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| |    
T  22655684 gtatatcaccaagaaactg-aagttgatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaa 22655586  T
Q  315 aaggaaggtgccaa-cgttcatttgaaaagcactgggtgcttgtacttca 363  Q
    | | |||||| |||  |||||||||||||||| ||||||||||| |||||    
T  22655585 aggaaaggtggcaatggttcatttgaaaagcattgggtgcttgtccttca 22655536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 18 - 363
Target Start/End: Complemental strand, 22643301 - 22642954
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | |||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||| |||||||| || |||    
T  22643301 agacaaagttgatcaaatttaataggtcttggaagaacaaaagaaagcaaaggaatcaaaaagaagagaaacct-aaagcatctgaagaaatcggcctct 22643203  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagct 215  Q
    |||||  |||||||  ||||||||||| |||||||||||||||||||| |||  | |   ||||||||||| |||||||||||| || || |||||||||    
T  22643202 gaagttgaaagtgctcctgaagccaaaatgcatctgatgacgtcatcaaaagtgagtttatcagaagcaagtccttcagaagccaatatgatcagaagct 22643103  T
Q  216 gtataacatc-agaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 314  Q
    ||||| || | ||||  || |||||||||||||||||||||||||||  || || || ||||||||| ||| |||||||||||||| || |||||||| |    
T  22643102 gtatatcaccaagaaattg-aagttgatcagaagattcaacctgaagtttcaaatagttgtctattggattcaacctcgtctaagaaagcgaaagactaa 22643004  T
Q  315 aaggaaggtgccaac-gttcatttgaaaagcactgggtgcttgtacttca 363  Q
    | | |||||| |||| |||||||||||||||| ||||||||||| |||||    
T  22643003 aggaaaggtggcaacggttcatttgaaaagcattgggtgcttgtccttca 22642954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 177 - 367
Target Start/End: Original strand, 52350520 - 52350711
Alignment:
Q  177 tcagaagcaagaccttcagaagccatttgttcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgt 275  Q
    ||||||||||||||||||||||| | ||||||||||||| || || |||||||| ||| ||||||||||| ||||| |||||||||  || || ||||||    
T  52350520 tcagaagcaagaccttcagaagctaattgttcagaagctatacaaacatcagaaactg-aagttgatcaggagatttaacctgaagtttcaaatagctgt 52350618  T
Q  276 ctattgaatttaacctcgtctaagagagagaaagactcaaagg-aaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||| || ||| |||||| ||||||| || |||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  52350619 ctagtggattcaacctcatctaagaaagcgaaagactaaaagggaaggtgccaacgttcacttgaaaagcactgggtgcttgtccttcattga 52350711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 236 - 357
Target Start/End: Complemental strand, 28474413 - 28474292
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    ||||||||||||||||||| ||||||  || ||  ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28474413 agttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcgtctaagagagcgaaagactcaaaggaaggtgccaacgttcat 28474314  T
Q  336 ttgaaaagcactgggtgcttgt 357  Q
    ||||||||||||||||||||||    
T  28474313 ttgaaaagcactgggtgcttgt 28474292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 235 - 367
Target Start/End: Original strand, 45070547 - 45070680
Alignment:
Q  235 aagttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa-ggaaggtgccaacgtt 332  Q
    |||||| ||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  45070547 aagttgttcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaaga-tcaaatgggaggtgccaacgtt 45070645  T
Q  333 catttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||||| ||| |||||||||    
T  45070646 catttgaaaagcactgggtgcctgtccttcattga 45070680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 52350396 - 52350478
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatct 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  52350396 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatct 52350478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 274 - 368
Target Start/End: Complemental strand, 20251921 - 20251827
Alignment:
Q  274 gtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    |||||| | ||| |||||||||||||| || |||||||| || ||||||||||||||||| |||||||| || ||||||||||| ||||||||||    
T  20251921 gtctatgggattcaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgttcgtttgaaaaacattgggtgcttgtccttcattgag 20251827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 28474620 - 28474548
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 93  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  28474620 caaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacctaaa 28474548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 46180774 - 46180906
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| ||| |  ||| || ||| ||| | || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  46180774 agttgatcagaagattcaatctggaatctcaaaagagttgtttctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttca 46180873  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||||||| | |||||||    
T  46180874 tttgaaaagcactgggtgcttgtccctcattga 46180906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 45070339 - 45070421
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  45070339 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaag 45070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 19170033 - 19170115
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatct 100  Q
    ||||||| |||||||   || ||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||||||    
T  19170033 agacaaaattgatcattttagtaggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagccttaaagcatct 19170115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 236 - 359
Target Start/End: Complemental strand, 20799250 - 20799127
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    |||||||||| |||||||| |||||  ||| ||||||||| | ||||| |||| |||||||| || ||  || ||   ||||| | ||||||||||||||    
T  20799250 agttgatcaggagattcaatctgaaatctcaaagagctgtttcttgaagttaatctcgtctacgaaagcaaaggatcaaaagggaagtgccaacgttcat 20799151  T
Q  336 ttgaaaagcactgggtgcttgtac 359  Q
    ||| ||||||||||||||||||||    
T  20799150 ttggaaagcactgggtgcttgtac 20799127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 363
Target Start/End: Complemental strand, 17371314 - 17371101
Alignment:
Q  151 tgatgacgtcatcagaagcaaa-tccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaatctgcaagttgatcagaaga 249  Q
    |||||||||||| ||||||||| | | |||||||||||  | |||||||| | |   |||||||||| ||| || ||||| || || ||| |||| ||||    
T  17371314 tgatgacgtcattagaagcaaagttcatcagaagcaagttcatcagaagcaagtctatcagaagctgcatatcaccagaagctaca-gttcatcaaaaga 17371216  T
Q  250 ttcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttcatttgaaaagcactg 348  Q
    | ||||||||||  || || || ||| ||||| ||| |||||| ||||||| || |||||||| || | ||||||  ||| |||||||||||| ||| ||    
T  17371215 tgcaacctgaagtttcaaatagttgtttattggattcaacctcttctaagaaagcgaaagactaaaggaaaggtggaaacagttcatttgaaaggcattg 17371116  T
Q  349 ggtgcttgtacttca 363  Q
    | ||||||| |||||    
T  17371115 gatgcttgtccttca 17371101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 22599892 - 22599930
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  22599892 aggttttggaagaacaaaagagagcaaatgaatcaacaa 22599930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 23927195 - 23927113
Alignment:
Q  285 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||| ||| ||   ||||||| ||| |||||||| ||||||||||||| |||| || ||| |||||||    
T  23927195 ttaacctcgtctaagagagcgaaggatcaaaaggaaagtgtcaacgttcgtttgaaaagcacttggtgtttttacctcattga 23927113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 363
Target Start/End: Complemental strand, 21544244 - 21544088
Alignment:
Q  207 tcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagaga 306  Q
    ||||||||||| || || ||||| || || ||| |||||||||| |||||| |||  || || |||| | ||||| ||| |||||| || |||| || ||    
T  21544244 tcagaagctgtgtatcaccagaagctaca-gttcatcagaagatgcaacctaaagtttcaaatagctatttattggattcaacctcttcaaagaaagcga 21544146  T
Q  307 aagactcaaaggaaggtgccaacg-ttcatttgaaaagcactgggtgcttgtacttca 363  Q
    |||||| || | || ||| ||||| ||||||||||||||| ||| |||||||||||||    
T  21544145 aagactaaaggaaaagtggcaacgattcatttgaaaagcattggatgcttgtacttca 21544088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 22154246 - 22154205
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  22154246 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 22154205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 22609956 - 22610001
Alignment:
Q  322 gtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||    
T  22609956 gtgccaacgctcatttgaaaagcactgagtgcttgtacctcattga 22610001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 18310918 - 18310993
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    |||||||||||| |||  ||| || | |||||||| |  ||||| |||||||||||||||||||||||||| ||||    
T  18310918 aacctcgtctaaaagaacgaaggattgaaaggaagatatcaacggtcatttgaaaagcactgggtgcttgtccttc 18310993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 147971 - 148052
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  147971 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 148052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 154046 - 154127
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  154046 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 154127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 5974214 - 5974133
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga-----tgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||     |||||||||||||||||    
T  5974214 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 5974133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 25448243 - 25448281
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  25448243 aggtcttggaagaacaatagagagcaaaggaatcaacaa 25448281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 675667 - 675626
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||| ||||||||| |||||||||    
T  675667 caacggtcatttgaaaagcactcggtgcttgtccttcattga 675626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 675951 - 675915
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  675951 aataggtcttggaagaacaatagagagcaaaggaatc 675915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 1900696 - 1900664
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  1900696 tggaagaacaaaagagagcaaaggaatcaacaa 1900664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 74
Target Start/End: Complemental strand, 2268891 - 2268863
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatca 74  Q
    |||||||||||||||||||||||||||||    
T  2268891 tggaagaacaaaagagagcaaatgaatca 2268863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 14388111 - 14388147
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  14388111 caacggtcatttgaaaagcactgggtgcttgtccttc 14388147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 20799445 - 20799409
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  20799445 aataggtcttggaagaacaatagagagcaaaggaatc 20799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 22609693 - 22609729
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  22609693 aataggtcttggaagaacaatagagagcaaaggaatc 22609729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 34255221 - 34255372
Alignment:
Q  41 ggtcttggaagaacaaa-agagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagc 139  Q
    ||||||||||||||||| | |||||| ||  |||||||| ||| ||| | |||| || ||| |||||| |||| ||| |||| | ||||||  ||||||     
T  34255221 ggtcttggaagaacaaataaagagcatatacatcaacaaaaagggaagcttaaa-gcctctgaagaaaactgcgtctaaagtttgaagtgctcctgaaga 34255319  T
Q  140 caaagtgcatctga-----tgacgtcatcagaagcaaatccgtcagaagcaag 187  Q
    |||||||| |||||     |||||||||||||||||| | | |||||||||||    
T  34255320 caaagtgcctctgaagtaatgacgtcatcagaagcaagttcatcagaagcaag 34255372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 36134537 - 36134505
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  36134537 tggaagaacaaaagagagcaaaggaatcaacaa 36134505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 22 - 368
Target Start/End: Original strand, 36209775 - 36210120
Alignment:
Q  22 aaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    ||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||    
T  36209775 aaagttgatcaatttaataggtcttggaagaacaaaagagagctaaggaatcaacaagaagagaaacctagaagcgtctgaagaaatctgcctctgaagt 36209874  T
Q  122 ctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataa 221  Q
      |||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||    
T  36209875 tgaaagtgcgtctgaagctaaaatgcatctgatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagccaactgttcagaagctgtataa 36209974  T
Q  222 catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaag 321  Q
    || ||||| ||| ||||||||||||||||||||||||||| ||| || || ||||||||| |||||||||||||||||| || |||||||| || |||||    
T  36209975 caccagaaactg-aagttgatcagaagattcaacctgaagtctcaaatagttgtctattggatttaacctcgtctaagaaagcgaaagactaaagggaag 36210073  T
Q  322 gtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    |||||||||||  ||||||||||| |||||| |||| ||||||||||    
T  36210074 gtgccaacgtttgtttgaaaagcattgggtgtttgtccttcattgag 36210120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 18 - 367
Target Start/End: Original strand, 14778119 - 14778453
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  ||||||||||| ||| |||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||  ||||||    
T  14778119 agacaaagttgatcaatttaataggtcttagaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatcaacatctg 14778218  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||               |||||||||| |||||||||||    
T  14778219 aagtctaaagtgcgtctgaagccaaaatgcatatgatgacgtcatcaaaagcaaatccgtcag---------------aagccatttgctcagaagctgt 14778303  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| ||||    
T  14778304 ataacatcagaaactgcaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtttaagggagcgaaagactaaaag 14778403  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  14778404 gaaggtgccaacgttcattagaaaagcactgggtgcttgtccttcattga 14778453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 10 - 363
Target Start/End: Complemental strand, 33378830 - 33378465
Alignment:
Q  10 aggagcacagacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaat 108  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||    
T  33378830 aggaccacagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaaacct-aaagcatctaaagaaat 33378732  T
Q  109 ctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcaga 196  Q
    |||| ||||||||  |||||||  ||||||||||| || |||||||||||||||||||||  |    ||| |        |||  |||||| ||||||||    
T  33378731 ctgcctctgaagttgaaagtgctcctgaagccaaaatgtatctgatgacgtcatcagaagtgagattatcagaagcaagttcaatagcaagtccttcaga 33378632  T
Q  197 agccatttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtct 296  Q
    ||||||||| |||||||||||||| || ||||| ||| ||||| |||||||||| ||||||||||  || || |||||||||||| ||| ||||||||||    
T  33378631 agccatttgatcagaagctgtatatcaccagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtct 33378533  T
Q  297 aagagagagaaagactcaaaggaaggtgccaacg-ttcatttgaaaagcactgggtgcttgtacttca 363  Q
    |||| || |||||||| || | |||||| ||||| ||||||||||| ||| ||| ||||||| |||||    
T  33378532 aagaaagcgaaagactaaaggaaaggtggcaacgattcatttgaaaggcattggatgcttgtccttca 33378465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 177 - 367
Target Start/End: Original strand, 17993613 - 17993804
Alignment:
Q  177 tcagaagcaagaccttcagaagccatttgttcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgt 275  Q
    ||||||||||||||||||||||| | ||||||||||||| || || |||||||| ||| ||||||||||| ||||| |||||||||  || || ||||||    
T  17993613 tcagaagcaagaccttcagaagctaattgttcagaagctatacaaacatcagaaactg-aagttgatcaggagatttaacctgaagtttcaaatagctgt 17993711  T
Q  276 ctattgaatttaacctcgtctaagagagagaaagactcaaagg-aaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||| || ||| |||||| ||||||| || |||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  17993712 ctagtggattcaacctcatctaagaaagcgaaagactaaaagggaaggtgccaacgttcacttgaaaagcactgggtgcttgtccttcattga 17993804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 236 - 357
Target Start/End: Original strand, 18006939 - 18007061
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||||||| ||  || || ||| ||||| ||| ||||||||||||||||||||| ||| |||| ||||| ||||||||||||| |    
T  18006939 agttgatcagaagattcaacctggagtttcaaaagagttgtcttttggatttaacctcgtctaagagagcgaaggactaaaagggaggtgccaacgttaa 18007038  T
Q  335 tttgaaaagcactgggtgcttgt 357  Q
    |||||||||||||||||||||||    
T  18007039 tttgaaaagcactgggtgcttgt 18007061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 19244131 - 19244058
Alignment:
Q  284 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgt 357  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19244131 tttaacctcgtctaagagagcgaaagactcaaaggaaggtgtcaacgttcatttgaaaagcactgggtgcttgt 19244058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 273 - 367
Target Start/End: Original strand, 14710695 - 14710789
Alignment:
Q  273 tgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||| |||||||||||| |||| ||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  14710695 tgtctattggatttaacctcgtttaagggagcgaaagactaaaaggaaggtgccaacgttcattagaaaagcactaggtgcttgtccttcattga 14710789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 17993489 - 17993571
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatct 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  17993489 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatct 17993571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 18774534 - 18774666
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    |||||||| |||||||||| |||||  ||| || ||||||||| || || |||||||||||||||||||  || ||   ||||| |||||||||||||||    
T  18774534 agttgatctgaagattcaatctgaaatctcaaaagagctgtctctttaagttaacctcgtctaagagagcaaaggatcaaaagggaggtgccaacgttca 18774633  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||| |||| |||||||||    
T  18774634 tttgaaaagcactgggtgtttgtccttcattga 18774666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 19244388 - 19244289
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  19244388 caaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaag 19244290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 8997136 - 8997251
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    ||||||||||||||| ||| |||||  ||| ||||||||||| ||||| ||||||||||| |||| || ||| ||   ||||||| ||||||||||||||    
T  8997136 agttgatcagaagatccaatctgaaatctcaaagagctgtctcttgaagttaacctcgtccaagaaagcgaaggatcaaaaggaaagtgccaacgttcat 8997235  T
Q  336 ttgaaaagcactgggt 351  Q
    ||||||||||||||||    
T  8997236 ttgaaaagcactgggt 8997251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 16819230 - 16819363
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| |||||||||||||||| || ||||||   ||||| || ||||||||||||    
T  16819230 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagaaagcgaaagatcgaaagggagttgccaacgttca 16819329  T
Q  335 tttg-aaaagcactgggtgcttgtacttcattga 367  Q
    |||| ||||||||||||||||||| ||| |||||    
T  16819330 tttgaaaaagcactgggtgcttgtcctttattga 16819363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 18006700 - 18006798
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    |||||||||||||   ||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||| ||||||||| |||||| |||| |||||||    
T  18006700 caaagttgatcaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaataagaggaacct-aaagcatctgaagaaaactgcgtctgaag 18006798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 16819037 - 16819119
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||||||||||||||||||||||| ||  || ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  16819037 aataggtcttggaagaacaaaagagagcaaaggacccatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaag 16819119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 18774341 - 18774423
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||| | |||||| |||| |||||||    
T  18774341 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacct-aaagcatatgaagaaaactgcgtctgaag 18774423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 23509469 - 23509387
Alignment:
Q  285 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||| ||| ||   ||||||| ||| |||||||| ||||||||||||||||||||| ||| |||||||    
T  23509469 ttaacctcgtctaagagagcgaatgatcaaaaggaaagtgtcaacgttcgtttgaaaagcactgggtgcttttacctcattga 23509387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 55651635 - 55651594
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  55651635 caacgttcatttgaaaagcactgggtgcttgtccttcattga 55651594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 13575892 - 13575930
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13575892 aggtcttggaagaacaatagagagcaaatgaatcaacaa 13575930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 37435266 - 37435307
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  37435266 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 37435307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 56034916 - 56034879
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaagaaga 83  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  56034916 tggaagaacaaaagagagcaaatgaatcaacaaaaaga 56034879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 40470324 - 40470406
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctg-----atgacgtcatcagaagcaa 171  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||||     |||||||||||||||||||    
T  40470324 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagcaa 40470406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 22675298 - 22675336
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  22675298 aggtcttggaagaacaatagagagcaaaggaatcaacaa 22675336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 25657676 - 25657595
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctg-----atgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||||     ||||||||||||||||||    
T  25657676 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagca 25657595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 40454068 - 40454149
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctg-----atgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||||     ||||||||||||||||||    
T  40454068 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagca 40454149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 45833759 - 45833721
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  45833759 aggttttggaagaacaaaagagagcaaacgaatcaacaa 45833721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 47151795 - 47151879
Alignment:
Q  90 taaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    ||||||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||| ||     ||||||||||||||||||||    
T  47151795 taaaagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcctctgaagtgatgacgtcatcagaagca 47151879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 3395983 - 3395951
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  3395983 tggaagaacaaaagagagcaaaggaatcaacaa 3395951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 9141220 - 9141188
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  9141220 tggaagaacaaaagagagcaaaggaatcaacaa 9141188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 12601458 - 12601426
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  12601458 tggaagaacaaaagagagcaaaggaatcaacaa 12601426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 14904073 - 14904105
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||||||||||||| |||||    
T  14904073 tggaagaacaaaagagagcaaatgaataaacaa 14904105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 19620846 - 19620878
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  19620846 tggaagaacaaaagagagcaaaggaatcaacaa 19620878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 29121738 - 29121659
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||||||||| | |||||||| |||||||||| ||| ||| | ||||| | ||| |||||| ||||| ||||||    
T  29121738 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaaa-cgtctgaagaaaactgcacctgaag 29121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 49001659 - 49001695
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  49001659 aataggtcttggaagaacaatagagagcaaaggaatc 49001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 55651903 - 55651867
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  55651903 aataggtcttggaagaacaatagagagcaaaggaatc 55651867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 208; Significance: 1e-113; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 18 - 367
Target Start/End: Complemental strand, 61611 - 61277
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  ||||||||||| ||| |||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||  ||||||    
T  61611 agacaaagttgatcaatttaataggtcttagaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatcaacatctg 61512  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||               |||||| |||||||||||    
T  61511 aagtctaaagtgcgtctgaagccaaaatgcatatgatgacgtcatcaaaagcaaatccgtcagaagc---------------catttgctcagaagctgt 61427  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| ||||    
T  61426 ataacatcagaaactgcaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtttaagggagcgaaagactaaaag 61327  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  61326 gaaggtgccaacgttcattagaaaagcactgggtgcttgtccttcattga 61277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 40229059 - 40228709
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  40229059 agacaaagttaatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctg 40228960  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||| |    
T  40228959 aagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagctaattgttcagaagctat 40228860  T
Q  218 at-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa 316  Q
    || |||| ||||| ||| ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| ||     
T  40228859 ataaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagactaaag 40228761  T
Q  317 ggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    ||||||||||||||||| ||||||||||| |||||| |||| ||||||||||    
T  40228760 ggaaggtgccaacgttcgtttgaaaagcattgggtgattgtccttcattgag 40228709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 368
Target Start/End: Original strand, 20214853 - 20215202
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||| || ||  ||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||| ||||||||||| | ||    
T  20214853 agacaaagttaattaatttaataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctagaagcatctgaagaaatctgcctttg 20214952  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||    
T  20214953 aagttgaaagtgcttctgaagccaaaatgcatctgatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagccaactgttcagaagctgt 20215052  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    ||| |||||||| ||| ||||||||||||||||||||| ||||| ||| || | || ||||||| ||| |||||||||||||| || |||||||| || |    
T  20215053 atatcatcagaaactg-aagttgatcagaagattcaacatgaagtctcaaataactatctattggattcaacctcgtctaagaaagcgaaagactaaagg 20215151  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    |||||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  20215152 gaaggtgccaacgtttgtttgaaaagcattgggtgcttgtccttcattgag 20215202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 368
Target Start/End: Original strand, 40032508 - 40032856
Alignment:
Q  20 acaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaa 119  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  40032508 acaaagttgatcaatttaataagtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctgaa 40032607  T
Q  120 gtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtat 219  Q
    ||  |||||||||||||||||| | | ||||||||||||||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||| |||    
T  40032608 gttgaaagtgcgtctgaagccagaatacatctgatgacgtcatcagaagcaaatctatcagaagcaagatcttcagaagccaattgttcagaagctatat 40032707  T
Q  220 -aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaagg 318  Q
     |||| ||||| ||| ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || ||    
T  40032708 aaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggg 40032806  T
Q  319 aaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    ||||||||||||||| ||||||||||| | ||||||||| |||| |||||    
T  40032807 aaggtgccaacgttcgtttgaaaagcatttggtgcttgtccttctttgag 40032856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 1915800 - 1915468
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||| ||||    
T  1915800 agacaaagttgatcaatgtaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaatctagaagcatctgaagaaatctgcctctg 1915701  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    |||                  ||||| |||||||||||||||||||| |||| ||||  ||||||||||||||||||||||| | ||||||| ||||| |    
T  1915700 aag------------------ccaaaatgcatctgatgacgtcatcaaaagcgaatctatcagaagcaagaccttcagaagctaattgttcataagctat 1915619  T
Q  218 ataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa 316  Q
    |||| || ||||| ||| ||||||||||| |||||||| ||||||  || || |||||||||||| | | |||||||||||||| || ||||| ||  ||    
T  1915618 ataaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaatagctgtctattggactcaacctcgtctaagaaagcgaaagtctataa 1915520  T
Q  317 ggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    ||||||||||||||||| ||||||||||| |||||| |||| |||| |||||    
T  1915519 ggaaggtgccaacgttcgtttgaaaagcattgggtgtttgtccttctttgag 1915468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 179 - 367
Target Start/End: Complemental strand, 13405358 - 13405168
Alignment:
Q  179 agaagcaagaccttcagaagccatttgttcagaagctgtata---acatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgt 275  Q
    ||||||||||||||| ||||| | ||||||||||||| ||||   ||||||||| ||| ||||||||||| |||||||||||||||  || || || |||    
T  13405358 agaagcaagaccttcggaagctaattgttcagaagctatatataaacatcagaaactg-aagttgatcaggagattcaacctgaagtttcaaatagttgt 13405260  T
Q  276 ctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||| ||||||||||||||||| ||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  13405259 ctattggatttaacctcgtctaagggagcgaaatactaaaaggaaggtgccaacgttcattagaaaagcactgggtgcttgtccttcattga 13405168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 20168036 - 20168168
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||| ||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||| ||   ||||| |||||||||||||||    
T  20168036 agttgttcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaggatcaaaagggaggtgccaacgttca 20168135  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||||||| |||||||||    
T  20168136 tttgaaaagcactgggtgcttgtccttcattga 20168168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 13405486 - 13405384
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||   ||||||||||||| |||||||| ||||||||||| ||||    
T  13405486 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaatgtgaagagaaacctagaagcatctgaagaaatctgcctctg 13405387  T
Q  118 aag 120  Q
    |||    
T  13405386 aag 13405384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 13534100 - 13533968
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  13534100 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagagagcgaatgatcaaaagggaagtgccaacgttca 13534001  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||||||| | |||||||    
T  13534000 tttgaaaagcactgggtgcttgtccctcattga 13533968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 36095622 - 36095754
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||||||   ||||| || |||||||||||     
T  36095622 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaagatcgaaagggagttgccaacgttct 36095721  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||| |||||||| ||| |||||    
T  36095722 tttgaaaagcactgcgtgcttgtcctttattga 36095754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 36097079 - 36097211
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||||||   ||||| || |||||||||||     
T  36097079 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaagatcgaaagggagttgccaacgttct 36097178  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||| |||||||| ||| |||||    
T  36097179 tttgaaaagcactgcgtgcttgtcctttattga 36097211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 355
Target Start/End: Original strand, 35543098 - 35543218
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||| ||   ||||| | |||| ||||||||    
T  35543098 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgctaacgttca 35543197  T
Q  335 tttgaaaagcactgggtgctt 355  Q
    |||||||||||||||||||||    
T  35543198 tttgaaaagcactgggtgctt 35543218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 20167825 - 20167927
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||| |||||   |||| |||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||||||||    
T  20167825 agacaaagttaatcaattcaatatgtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcatctg 20167923  T
Q  118 aagt 121  Q
    ||||    
T  20167924 aagt 20167927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 357
Target Start/End: Complemental strand, 13523373 - 13523251
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| ||||||| ||||||||||| ||| ||   ||||| | |||||||||||||    
T  13523373 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaaccttgtctaagagagcgaaggatcaaaagggaagtgccaacgttca 13523274  T
Q  335 tttgaaaagcactgggtgcttgt 357  Q
    ||||||||| |||||||| ||||    
T  13523273 tttgaaaagtactgggtgattgt 13523251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 23478758 - 23478669
Alignment:
Q  22 aaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgc 112  Q
    |||||||||||   ||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  23478758 aaagttgatcattttaaaaggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaaactgc 23478669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 36096870 - 36096952
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||| | |||||| |||| |||||||    
T  36096870 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatatgaagaaaactgcgtctgaag 36096952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 36095413 - 36095487
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgc 112  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||| | |||||| ||||    
T  36095413 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatatgaagaaaactgc 36095487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 33933669 - 33933623
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaa 86  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||||    
T  33933669 aggtcttggaagaacaatagagagcaaaggaatcaacaaaaagagaa 33933623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 11207824 - 11207932
Alignment:
Q  124 aaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataaca 223  Q
    |||||||  |||||| ||||||||| | |||||||||||||||||||| |   |||||||| || |  |||||||||||||  ||||||| |||||| ||    
T  11207824 aaagtgctcctgaagacaaagtgcaccagatgacgtcatcagaagcaatt---tcagaagctagtctatcagaagccatttcatcagaagttgtatatca 11207920  T
Q  224 tcagaatctgca 235  Q
     ||||| |||||    
T  11207921 ccagaaactgca 11207932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 20416964 - 20417005
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  20416964 caacggtcatttgaaaagcactgggtgcttgtccttcattga 20417005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 11994281 - 11994152
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagc 139  Q
    |||||||||||||||||   |||||||| |||||||||| ||| | || || ||||||||| |||||| ||||  ||||||| ||||| ||  ||||||     
T  11994281 aggtcttggaagaacaattaagagcaaaggaatcaacaaaaag-ggaagcttaaagcatctgaagaaaactgctcctgaagt-taaagcgctcctgaaga 11994184  T
Q  140 caaagtgcatctgatgacgtcatcagaagcaa 171  Q
    || || ||  ||||||| ||||||||||||||    
T  11994183 cacagcgctcctgatgatgtcatcagaagcaa 11994152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 1109572 - 1109491
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga-----tgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||     |||||||||||||||||    
T  1109572 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 1109491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 485
Target Start/End: Complemental strand, 17629111 - 17629037
Alignment:
Q  411 ttggcttcttggaaatggtgaaaagattaatttctggaatgatagttggtgtggtgcccccctctctcaggcctt 485  Q
    |||||| ||||| |||||| |||| || | ||||||||||||||| |||||||| || ||||| ||||| |||||    
T  17629111 ttggctccttggtaatggtcaaaatatcagtttctggaatgatagctggtgtggagcacccctttctcaagcctt 17629037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 78
Target Start/End: Complemental strand, 21910884 - 21910854
Alignment:
Q  48 gaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||||||||||||    
T  21910884 gaagaacaaaagagagcaaatgaatcaacaa 21910854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 3245210 - 3245358
Alignment:
Q  41 ggtcttggaagaacaaa-agagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagc 139  Q
    ||||||||||||||||| | |||||||||  |||||||| ||| | || || ||||| ||| |||||| ||||  ||||||| | |||||| |||||||     
T  3245210 ggtcttggaagaacaaataaagagcaaatacatcaacaaaaag-ggaagcttaaagcgtctgaagaaaactgctcctgaagtttgaagtgcttctgaaga 3245308  T
Q  140 caaagtgcatc-----tgatgacgtcatcagaagcaaatccgtcagaagc 184  Q
    |||||||| ||     |||||||||||| |||||||| | | ||||||||    
T  3245309 caaagtgcttctaaagtgatgacgtcattagaagcaagttcatcagaagc 3245358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 11207724 - 11207804
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    ||||||||||||||||||||| ||| || || ||||||  ||||||| ||| ||||| ||| |||||| |||| ||||||||    
T  11207724 aggtcttggaagaacaaaagaaagcgaaagattcaacataaagagaagcct-aaagcgtctgaagaaaactgcctctgaagt 11207804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 36084295 - 36084376
Alignment:
Q  94 agcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    ||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  36084295 agcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 36084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 13534294 - 13534258
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  13534294 aataggtcttggaagaacaatagagagcaaaggaatc 13534258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 32754431 - 32754395
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  32754431 aataggtcttggaagaacaatagagagcaaaggaatc 32754395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 357
Target Start/End: Complemental strand, 29379975 - 29379636
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||| | ||    
T  29379975 agacaaagttgatcaatttaacaggtcttggaagaacaaaagagagtaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctttg 29379876  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  ||||||| |||||||||||| || |||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  29379875 aagttgaaagtgcatctgaagccaaaatgtatctgatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagccaattgttcagaagctgt 29379776  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    |||||| ||||| ||| ||||| |||||||||||||||| ||||  || || |||||||||||||||| |||||||||||||| || |||||||| ||      
T  29379775 ataacaccagaaactg-aagtttatcagaagattcaacccgaagtttcaaatagctgtctattgaattcaacctcgtctaagaaagcgaaagactaaaga 29379677  T
Q  318 gaaggtgccaac-gttcatttgaaaagcactgggtgcttgt 357  Q
    ||||||| |||| |||||||||||||||| |||| ||||||    
T  29379676 gaaggtggcaacggttcatttgaaaagcattgggcgcttgt 29379636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 18 - 345
Target Start/End: Original strand, 17518812 - 17519139
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |  ||||    
T  17518812 agacaacgttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacttaaaagcatctgaagaaatccgtctctg 17518911  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  ||||||| |||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| | |||||||||||||    
T  17518912 aagttgaaagtgcttctgaagccaaaatgcatctgatgacgtcatcagaagcgaatctatcagaagcaagaccttcagaagccaatcgttcagaagctgt 17519011  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    ||| || ||||| ||| |||||||||||||||||||||| ||||  || || |||||||||||| ||| ||||||||| |||| || |||||||| || |    
T  17519012 atatcaccagaaactg-aagttgatcagaagattcaacccgaagtttcaaatagctgtctattggattcaacctcgtccaagaaagcgaaagactaaagg 17519110  T
Q  318 gaaggtgccaac-gttcatttgaaaagca 345  Q
    ||||||| |||| ||||||||||||||||    
T  17519111 gaaggtggcaacggttcatttgaaaagca 17519139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 8032415 - 8032080
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||||| ||||    
T  8032415 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatctgcctctg 8032316  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  ||||||| |||||||  ||| ||||| |||||||||||||||||               ||||||||||||||||| | ||||||||||||| |    
T  8032315 aagttgaaagtgcctctgaagagaaaatgcatatgatgacgtcatcagaa---------------gcaagaccttcagaagctaattgttcagaagctat 8032231  T
Q  218 at-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa 316  Q
    || |||| ||||| ||| ||||||||||| |||||||| ||||||  || || || |||||||||  || |||||||||||||| || |||||||| ||     
T  8032230 ataaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaatagttgtctattggtttcaacctcgtctaagaaagcgaaagactaaag 8032132  T
Q  317 ggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    ||||||||||||||||| ||||||||||| ||||||||||| |||| |||||    
T  8032131 ggaaggtgccaacgttcgtttgaaaagcattgggtgcttgtccttccttgag 8032080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 23270905 - 23271056
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    |||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23270905 caaagttgatcaacataataagtcttggaagaacataggagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctgaag 23271004  T
Q  121 tctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaa 172  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  23271005 tctaaagtgcgtctgaagccaaaatgcatctaatgacgtcatcagaagcaaa 23271056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 40003593 - 40003354
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||    
T  40003593 agacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaatctgcctct 40003495  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagct 215  Q
    |||||  ||||||| |||||| ||||| |||||||||||||||||||| |||| | |   ||| |||| || |||||||||||| ||||| |||||||||    
T  40003494 gaagttgaaagtgcttctgaaaccaaaatgcatctgatgacgtcatcaaaagcgagtttatcataagcgagtccttcagaagccaatttgatcagaagct 40003395  T
Q  216 gtataacatcagaatctgcaagttgatcagaagattcaacct 257  Q
    ||||| || ||||| ||| |||||||||||||||||||||||    
T  40003394 gtatatcaccagaaactg-aagttgatcagaagattcaacct 40003354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 18534817 - 18534983
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||||| ||||    
T  18534817 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatctgcctctg 18534916  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagc 184  Q
    ||||  ||||||| | ||||| |||| |||||||||||||||||||||||||||  || ||||||||    
T  18534917 aagttgaaagtgcctttgaagacaaaatgcatctgatgacgtcatcagaagcaagaccttcagaagc 18534983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 367
Target Start/End: Complemental strand, 19461567 - 19461211
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||| |   ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  19461567 caaagttgatctattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaag 19461469  T
Q  121 -tctaaagtgcgtctgaag-ccaaagtgcatctg-----atgacgtcatcagaagc--aaatccgtcagaagc-aagaccttcagaagccatttgttcag 210  Q
     | | |||||| |||||||    |||||| ||||     ||||| |||||||||||  |||  | |||||||| |||  | |||||||| | ||  | ||    
T  19461468 ttttgaagtgcttctgaagtttcaagtgcctctgaagtaatgacatcatcagaagccaaaactcatcagaagcaaagttcatcagaagcaacttcattag 19461369  T
Q  211 aagctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactc-taagagctgtctattgaatttaacctcgtctaagagagagaaa 308  Q
    ||||| ||| | || ||||| || | ||||||||||||||||||||||||||  ||  ||||||||||| ||||||||||||||||||||||||| |||     
T  19461368 aagctatatcatcaccagaagctac-agttgatcagaagattcaacctgaagtttcaaaagagctgtcttttgaatttaacctcgtctaagagagcgaag 19461270  T
Q  309 gactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    || | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  19461269 gattaaaagggaggtgccaacgttcatttgaaaagcactgggtgcttgtccttcattga 19461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 367
Target Start/End: Complemental strand, 19559245 - 19558889
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||| |   ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  19559245 caaagttgatctattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaag 19559147  T
Q  121 -tctaaagtgcgtctgaag-ccaaagtgcatctg-----atgacgtcatcagaagc--aaatccgtcagaagc-aagaccttcagaagccatttgttcag 210  Q
     | | |||||| |||||||    |||||| ||||     ||||| |||||||||||  |||  | |||||||| |||  | |||||||| | ||  | ||    
T  19559146 ttttgaagtgcttctgaagtttcaagtgcctctgaagtaatgacatcatcagaagccaaaactcatcagaagcaaagttcatcagaagcaacttcattag 19559047  T
Q  211 aagctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactc-taagagctgtctattgaatttaacctcgtctaagagagagaaa 308  Q
    ||||| ||| | || ||||| || | ||||||||||||||||||||||||||  ||  ||||||||||| ||||||||||||||||||||||||| |||     
T  19559046 aagctatatcatcaccagaagctac-agttgatcagaagattcaacctgaagtttcaaaagagctgtcttttgaatttaacctcgtctaagagagcgaag 19558948  T
Q  309 gactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    || | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  19558947 gattaaaagggaggtgccaacgttcatttgaaaagcactgggtgcttgtccttcattga 19558889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 23271091 - 23271222
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    ||||||||||||||||||||||||||  || ||||||||||| ||| |||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  23271091 agttgatcagaagattcaacctgaagtttcaaagagctgtcttttggatttaacctcgtctaagaaagcgaaagactaaaaggaaggtgccaacgttcat 23271190  T
Q  336 ttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||| || ||||||||||| |||||||||    
T  23271191 ttgaaaaacattgggtgcttgtccttcattga 23271222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 7018268 - 7018399
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    |||||||||||||||||||||||||||||||||||| |||||  || |||||| | |||||||||||| ||||||   | ||| ||||||||||||||||    
T  7018268 agttgatcagaagattcaacctgaagactctaagagttgtctcctggatttaaacccgtctaagagagcgaaagagaaagagggaggtgccaacgttcat 7018367  T
Q  336 ttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||| |||| |||||||||    
T  7018368 ttgaaaagcactgggtgtttgtccttcattga 7018399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 357
Target Start/End: Complemental strand, 28903867 - 28903516
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||| |||    
T  28903867 agacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaaactgcgtct 28903769  T
Q  117 gaag-tctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagc-aaatccgtcagaagc---aagaccttcagaagc-catttg 205  Q
    |||| | | ||||||  |||||| | ||| || ||     |||||| |||||||||||| |||| | ||||||||   || | | ||||||||  | ||     
T  28903768 gaagttatgaagtgctcctgaagaccaagggcctctgaagtgatgatgtcatcagaagcaaaattcatcagaagctataaaatcatcagaagcaaaattc 28903669  T
Q  206 ttcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagaga 304  Q
     ||||||||| || || || ||||| || ||| || |||||||||| |||||| |||  || || || ||| ||||| ||| |||||||||||||| ||     
T  28903668 atcagaagctataaaatcaccagaagctacaa-ttcatcagaagatgcaacctaaagtttcaaatagttgtttattggattcaacctcgtctaagaaagc 28903570  T
Q  305 gaaagactcaaaggaaggtgccaac-gttcatttgaaaagcactgggtgcttgt 357  Q
    |||||||| || | |||||| |||| |||||||||||||||||||| |||||||    
T  28903569 gaaagactaaaggaaaggtggcaacggttcatttgaaaagcactggatgcttgt 28903516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 22166910 - 22167041
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    ||||||||||||||||||| |||||  ||| ||||||||||| ||||| |||| |||||||| || ||  || ||   ||||||| || |||||||||||    
T  22166910 agttgatcagaagattcaatctgaaatctcaaagagctgtctcttgaagttaatctcgtctacgaaagcaaaggatcaaaaggaaagttccaacgttcat 22167009  T
Q  336 ttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||||||| |||||||    
T  22167010 ttgaaaagcactgggtgcttgtacctcattga 22167041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 236 - 359
Target Start/End: Original strand, 22135745 - 22135868
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    ||||||||||||||||||| |||||  ||| ||||||||||| ||||| |||| |||||||| || ||  || ||   ||||||| ||||||| ||||||    
T  22135745 agttgatcagaagattcaatctgaaatctcaaagagctgtctcttgaagttaatctcgtctacgaaagcaaaggatcaaaaggaaagtgccaaagttcat 22135844  T
Q  336 ttgaaaagcactgggtgcttgtac 359  Q
    ||||||||||||||||||||||||    
T  22135845 ttgaaaagcactgggtgcttgtac 22135868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 21541351 - 21541271
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  21541351 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 21541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 40003358 - 40003276
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    |||||||||||||| |  |||||||| || |||||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||    
T  40003358 aacctcgtctaagaaaacgaaagactaaagggaaggtggcaacggttcatttgaaaagcattgggtgcttgtccttcaatgag 40003276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 3843826 - 3843785
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  3843826 caacggtcatttgaaaagcactgggtgcttgtccttcattga 3843785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 16189364 - 16189323
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  16189364 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 16189323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 18120910 - 18120951
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  18120910 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 18120951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 20259594 - 20259635
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  20259594 caacggtcatttgaaaagcactgggtgcttgtccttcattga 20259635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 21046224 - 21046265
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  21046224 caacggtcatttgaaaagcactgggtgcttgtccttcattga 21046265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 22211365 - 22211406
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  22211365 caacgttcatttgaaaaacactgggtgcttgtacctcattga 22211406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 23370864 - 23370811
Alignment:
Q  314 aaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||| |||||| |||||||||||||||||||||||||| |||| ||||    
T  23370864 aaagggaggtaccaacggtcatttgaaaagcactgggtgcttgtccttctttga 23370811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 45567762 - 45567839
Alignment:
Q  143 agtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtata 220  Q
    |||||| ||||||||||||||||||| || | | ||||||||||| |  |||||||| ||||  ||||||||||||||    
T  45567762 agtgcacctgatgacgtcatcagaagtaagttcatcagaagcaagtctatcagaagctatttcctcagaagctgtata 45567839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 16207611 - 16207579
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||||||||||||||    
T  16207611 tggaagaacaaaagagagcaaatgaatcaacaa 16207579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 20160977 - 20161058
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  20160977 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 20161058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 20196490 - 20196409
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga-----tgacgtcatcagaagca 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||     |||||||||||||||||    
T  20196490 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 20196409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 21541242 - 21541149
Alignment:
Q  133 ctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaa 229  Q
    |||||| |||| |||| |||||||||||||||||||| | | | |||||||||||   |||| |||| ||||  |||||||||||||| || |||||    
T  21541242 ctgaagacaaaatgcacctgatgacgtcatcagaagcgagttcatcagaagcaag---ttcataagctatttcatcagaagctgtatatcaccagaa 21541149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 1238031 - 1237960
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgc 112  Q
    ||||||||||||||||| | |||||||| |||||||||| ||| | || || ||||||||| |||||| ||||    
T  1238031 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaag-ggaagcttaaagcatctgaagaaaactgc 1237960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 3833314 - 3833278
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3833314 aataggtcttggaagaacaatagagagcaaaggaatc 3833278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 3844094 - 3844058
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3844094 aataggtcttggaagaacaatagagagcaaaggaatc 3844058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 3844385 - 3844349
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3844385 aataggtcttggaagaacaatagagagcaaaggaatc 3844349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 17267827 - 17267795
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  17267827 tggaagaacaaaagagagcaaaggaatcaacaa 17267795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 20259326 - 20259362
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  20259326 aataggtcttggaagaacaatagagagcaaaggaatc 20259362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 21045956 - 21045992
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  21045956 aataggtcttggaagaacaatagagagcaaaggaatc 21045992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 22211096 - 22211132
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  22211096 aataggtcttggaagaacaatagagagcaaaggaatc 22211132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 39693891 - 39693859
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||| |||||||||||||||||||||||    
T  39693891 tggaagaacgaaagagagcaaatgaatcaacaa 39693859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 161; Significance: 1e-85; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 62121 - 61787
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||| ||| ||||    
T  62121 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagctaaggaatcaacaagaagagaaacctagaagcatctgaagaaatatgcctctg 62022  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  |||||||||||||||||||| |||||||||||||||||||||||               |||||| |||||||||||| |||||||||||||||    
T  62021 aagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaa---------------gcaagatcttcagaagccaattgttcagaagctgt 61937  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    |||||| || || ||| |||||||||||||||||||| ||||||  || || |||||||||||| ||| |||||| ||||||| || |||| ||| || |    
T  61936 ataacaccaaaaactg-aagttgatcagaagattcaatctgaagtttcaaatagctgtctattggattcaacctcatctaagaaagcgaaatactaaagg 61838  T
Q  318 gaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    |||||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  61837 gaaggtgccaacgtttgtttgaaaagcattgggtgcttgtccttcattgag 61787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 18 - 323
Target Start/End: Complemental strand, 117682 - 117378
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  117682 agacaaagttcatcaatttaataggtcttggaagaacaaaagagagctaagaaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctg 117583  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  |||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||| ||| |||||||| || ||||||||||||    
T  117582 aagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtcattagaagcaaatctatcagaagcaagatctttagaagccaatttttcagaagctgt 117483  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    |||||| ||||| ||| |||||||||||||||||||| || |||  || || || ||||||||  ||| |||||| ||||||| || |||||||| || |    
T  117482 ataacaccagaaactg-aagttgatcagaagattcaatctaaagtttcaaatagatgtctattagattcaacctcatctaagaaagcgaaagactaaagg 117384  T
Q  318 gaaggt 323  Q
    ||||||    
T  117383 gaaggt 117378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 159; Significance: 2e-84; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 357
Target Start/End: Original strand, 481491 - 481815
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| ||||    
T  481491 agacaaagttaatcaatttaaaaggtcttggaagaacaaaagagagcaaaggaatcaacgagaagagaaacctagaagcatctgaagaaatctgcctctg 481590  T
Q  118 aagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgt 217  Q
    ||||  |||||||||||||||||||| |||||||||||||||||               ||||||||||||||||||||||||| |||||||||||||||    
T  481591 aagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtca---------------tcagaagcaagaccttcagaagccaattgttcagaagctgt 481675  T
Q  218 ataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaag 317  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || |    
T  481676 ataacatcagaaactg-aagttaatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaagg 481774  T
Q  318 gaaggt-gccaacgttcatttgaaaagcactgggtgcttgt 357  Q
     ||||| || || |||||||||||||||| |||||||||||    
T  481775 aaaggtggcaaaagttcatttgaaaagcattgggtgcttgt 481815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 36 - 368
Target Start/End: Original strand, 156350 - 156682
Alignment:
Q  36 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 135  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||  ||||||| ||||    
T  156350 taataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaatctgcctctgaagttgaaagtgcttctg 156448  T
Q  136 aagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagctgtataacatcagaatctgc 234  Q
    |||||||| |||||||||||||||||||| |||  | |   ||||||||||| |||||||||||| ||||| |||||||||||||| |  ||||| |||     
T  156449 aagccaaaatgcatctgatgacgtcatcaaaagtgagtttatcagaagcaagtccttcagaagccaatttgatcagaagctgtatatcgccagaaactg- 156547  T
Q  235 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 333  Q
    |||||||||||||||| ||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| ||||| |||    
T  156548 aagttgatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacgattc 156647  T
Q  334 atttgaaaagcactgggtgcttgtacttcattgag 368  Q
    ||||||| |||  ||||||||||| ||||| ||||    
T  156648 atttgaatagctttgggtgcttgtccttcaatgag 156682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 117657 - 117621
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  117657 aataggtcttggaagaacaatagagagcaaaggaatc 117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 156; Significance: 1e-82; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 36 - 369
Target Start/End: Complemental strand, 5504 - 5171
Alignment:
Q  36 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 135  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||| |||||| ||||||||  ||||||| ||||    
T  5504 taataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagatatctgcctctgaagttgaaagtgcttctg 5406  T
Q  136 aagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagctgtataacatcagaatctgc 234  Q
    |||||||| ||||||||||||||||||||||||  | |   ||||||||||| |||||||||||| ||||| ||||||| |||||| || ||||| |||     
T  5405 aagccaaaatgcatctgatgacgtcatcagaagtgagtttatcagaagcaagtccttcagaagccaatttgatcagaagttgtatatcaccagaaactg- 5307  T
Q  235 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 333  Q
    |||||||||||||||| ||||||||||  || || |||| ||||||| ||| |||||||||||||| || |||||||| || |||||||| |||||  ||    
T  5306 aagttgatcagaagatgcaacctgaagtttcaaatagctttctattggattcaacctcgtctaagaaagcgaaagactaaagggaaggtggcaacgactc 5207  T
Q  334 atttgaaaagcactgggtgcttgtacttcattgagt 369  Q
    |||||||||||| ||||||||||| ||||| |||||    
T  5206 atttgaaaagcattgggtgcttgtccttcaatgagt 5171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 18 - 357
Target Start/End: Original strand, 6217 - 6567
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||||| |||    
T  6217 agacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaa-gcatctgaagaaatctgcttct 6314  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagccattt 204  Q
    |||||  |||||||  ||||||||||| ||||||||||||||||||||||||  |    ||| |        |||| |||||| ||||||||||||||||    
T  6315 gaagttgaaagtgctcctgaagccaaaatgcatctgatgacgtcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagccattt 6414  T
Q  205 gttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagaga 304  Q
    | |||||||||||||| || ||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| ||||||| ||     
T  6415 gatcagaagctgtatatcaccagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttctaagatagc 6513  T
Q  305 gaaagactcaaaggaaggtgccaac-gttcatttgaaaagcactgggtgcttgt 357  Q
    |||||||| || | |||||| |||| |||||||||||||||| |||||||||||    
T  6514 gaaagactaaaggaaaggtggcaacggttcatttgaaaagcattgggtgcttgt 6567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 355
Target Start/End: Original strand, 40014 - 40356
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||||| |||||| |||||| |||| |||||||    
T  40014 caaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacctaaa-gcatctgaagaaaactgcgtctgaag 40112  T
Q  121 tct-aaagtgcgtctgaagcca-aagtgcatctga-----tgacgtcatcagaagcaaatc-cgtcagaagcaa-gaccttcagaagccatttgttcaga 211  Q
    | | ||||||| |||||||    |||||| |||||     ||||||||||||||||| | | | |||||||||| |  | |||||||| | ||  |||||    
T  40113 ttttaaagtgcttctgaagtttcaagtgcctctgaagtaatgacgtcatcagaagcagaactcatcagaagcaaagttcatcagaagcaacttcgtcaga 40212  T
Q  212 agctgtataac-atcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaaga 310  Q
    |||| ||| |  | ||||| || || |||||||||||||||||| ||||||  || ||  ||||| ||||| |||||||||| |||||||||| ||||||    
T  40213 agctatatcattaccagaagctaca-gttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcatctaagagagtgaaaga 40311  T
Q  311 ctcaaaggaaggtgccaacgttcatttgaaaagcactgggtgctt 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40312 ctcaaaggaaggtgccaacgttcatttgaaaagcactgggtgctt 40356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 236 - 355
Target Start/End: Original strand, 58783 - 58902
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    ||||||||||||||||||| ||||||  || ||  ||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  58783 agttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcgtctaagagagcgaaagactcaaacgaaggtgccaacgttcat 58882  T
Q  336 ttgaaaagcactgggtgctt 355  Q
    ||||||||||||||||||||    
T  58883 ttgaaaagcactgggtgctt 58902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 357
Target Start/End: Original strand, 629 - 980
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||||| |||    
T  629 agacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacctaaa-gcatctgaagaaatctgcctct 727  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagccattt 204  Q
    |||||  ||| |||   |||||| ||| ||||||||||||| ||||||||||  |    ||| |        |||| |||||| ||||||||||||||||    
T  728 gaagttgaaaatgctcttgaagctaaaatgcatctgatgacatcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagccattt 827  T
Q  205 gttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagaga 304  Q
    | |||||| ||||||| |||||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||  ||||||| ||     
T  828 gatcagaaactgtatatcatcagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaaccttttctaagatagc 926  T
Q  305 gaaagactcaaaggaaggtgccaac-gttcatttgaaaagcactgggtgcttgt 357  Q
    |||||||| || | |||||| |||| |||||||||||||||| |||||||||||    
T  927 gaaagactaaaggaaaggtggcaacggttcatttgaaaagcattgggtgcttgt 980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 357
Target Start/End: Original strand, 822 - 1173
Alignment:
Q  18 agacaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 116  Q
    ||||||||||||||||  | ||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||||| |||    
T  822 agacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacctaaa-gcatctgaagaaatctgcctct 920  T
Q  117 gaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagccattt 204  Q
    |||||  ||| |||   |||||| ||| ||||||||||||| ||||||||||  |    ||| |        |||| |||||| ||||||||||||||||    
T  921 gaagttgaaaatgctcttgaagctaaaatgcatctgatgacatcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagccattt 1020  T
Q  205 gttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagaga 304  Q
    | |||||| ||||||| |||||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||  ||||||| ||     
T  1021 gatcagaaactgtatatcatcagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaaccttttctaagatagc 1119  T
Q  305 gaaagactcaaaggaaggtgccaac-gttcatttgaaaagcactgggtgcttgt 357  Q
    |||||||| || | |||||| |||| |||||||||||||||| |||||||||||    
T  1120 gaaagactaaaggaaaggtggcaacggttcatttgaaaagcattgggtgcttgt 1173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 9709 - 9351
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||  ||||    
T  9709 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaaactgtgtctg 9611  T
Q  118 aag-tctaaagtgcgtctgaag-ccaaagtgcatct-----gatgacgtcatcagaagca-aatccgtcagaagc-aagaccttcagaagccatttgttc 208  Q
    ||| | | |||||| |||||||    |||||| |||     ||||||||||||||||||| ||  |  ||||||| |||  | |||||||| | ||  ||    
T  9610 aagttttgaagtgcttctgaagtttcaagtgcctctgatgagatgacgtcatcagaagcagaactcaccagaagcaaagttcatcagaagcaacttcatc 9511  T
Q  209 agaagctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaa 307  Q
    ||||||| ||| | || ||||| || | ||||||| || |||||| ||||||||  || || |||||| ||||| ||| |||||| ||||||| || |||    
T  9510 agaagctatatcatcaccagaagctac-agttgattagtagattctacctgaagtttcaaatagctgtttattggattcaacctcatctaagaaagcgaa 9412  T
Q  308 agactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  9411 agactaaatggaaggtgccaacgttcatttgaaaagcattgggtgcttgtccttcattgag 9351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 368
Target Start/End: Original strand, 17504 - 17862
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  17504 agacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaaactgcgtctg 17602  T
Q  118 aag-tctaaagtgcgtctgaag-ccaaagtgcatct-----gatgacgtcatcagaagca-aatccgtcagaagc-aagaccttcagaagccatttgttc 208  Q
    ||| | | |||||| |||||||    |||||| |||     |||||| |||||||||||| ||  |  ||||||| |||  | |||||||| | ||  ||    
T  17603 aagttttgaagtgcttctgaagtttcaagtgcctctgaagagatgacatcatcagaagcagaactcaccagaagcaaagttcatcagaagcaacttcatc 17702  T
Q  209 agaagctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaa 307  Q
    | ||||  ||| | || ||||| || | ||||||| || |||||| ||||||||  || || || ||| ||||| ||| |||||| ||||||| || |||    
T  17703 ataagcaatatcatcaccagaagctac-agttgattagtagattctacctgaagtttcaaatagttgtttattggattcaacctcatctaagaaagcgaa 17801  T
Q  308 agactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 368  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  17802 agactaaaaggaaggtgccaacgttcatttgaaaagcattgggtgcttgtccttcattgag 17862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 21 - 355
Target Start/End: Original strand, 7317 - 7661
Alignment:
Q  21 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||  |||||||| |||| | |||||| |||| |||||||    
T  7317 caaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaagaacctaaa-gcatttgaagaaaactgcgtctgaag 7415  T
Q  121 tcta---aagtgcgtctgaagcca-aagtgcatctga-----tgacgtcatcagaagcaaatc-cgtcagaagcaa-gaccttcagaagccatttgttca 209  Q
    |||    |||||| |||||||    |||||| |||||     |||| |||||||||||||| | | |||||||||| |  | |||||||| | ||  |||    
T  7416 tcttttgaagtgcttctgaagtttcaagtgcctctgaagtaatgacatcatcagaagcaaaactcatcagaagcaaagttcatcagaagcaacttcatca 7515  T
Q  210 gaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaa 308  Q
    |||||| |||   |||||||| || || |||||||||||||||||| ||||||  || ||  | ||| ||||| ||||||||| |||||||| || ||||    
T  7516 gaagctatatcgtcatcagaagctaca-gttgatcagaagattcaatctgaagtttcaaatggttgtttattggatttaaccttgtctaagaaagcgaaa 7614  T
Q  309 gactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgctt 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7615 gactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgctt 7661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 127920 - 127879
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||| ||||||||||||||||||| |||||||||    
T  127920 caacggtcatttaaaaagcactgggtgcttgtccttcattga 127879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 236 - 357
Target Start/End: Complemental strand, 22227 - 22106
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 335  Q
    |||||||||||||||||||  |||||  || ||  ||||| |||||  |||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  22227 agttgatcagaagattcaatttgaagtttcaaatggctgtttattggttttaacctcgtctaagagagcgaaagactcaaaggaaggtgtcaacgttcat 22128  T
Q  336 ttgaaaagcactgggtgcttgt 357  Q
    ||||||||||||||||||||||    
T  22127 ttgaaaagcactgggtgcttgt 22106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 22404 - 22335
Alignment:
Q  51 gaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    |||||||||||||||||  ||||| ||||||||| ||||| ||||||||| |||||| |||| ||||||||    
T  22404 gaacaaaagagagcaaagaaatcatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaagt 22335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 58666 - 58534
Alignment:
Q  236 agttgatcagaagattcaacctgaagactc-taagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| |||||||||||| || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  58666 agttgatcagaagattcaatctgaaatctcataagagctgtctctttaagttaacctcgtctaagagagcgaacgatcaaaagggaagtgccaacgttca 58567  T
Q  335 tttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||||||| | |||||||    
T  58566 tttgaaaagcactgggtgcttgttcctcattga 58534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 61; Significance: 6e-26; HSPs: 4)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 267 - 367
Target Start/End: Complemental strand, 979 - 879
Alignment:
Q  267 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 366  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  979 aagagctgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatttgaaaagcactgtgtgcttgtccttcattg 880  T
Q  367 a 367  Q
    |    
T  879 a 879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 267 - 367
Target Start/End: Complemental strand, 5359 - 5259
Alignment:
Q  267 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 366  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  5359 aagagctgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatttgaaaagcactgtgtgcttgtccttcattg 5260  T
Q  367 a 367  Q
    |    
T  5259 a 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 5586 - 5485
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctg 117  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| ||||    
T  5586 agacaaagttgaccaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctg 5488  T
Q  118 aag 120  Q
    |||    
T  5487 aag 5485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 1187 - 1105
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 120  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  1187 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaag 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 59183 - 59299
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| |||||  |||||||||||||||||| ||| ||   ||||||| |||||||||||||    
T  59183 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagataacctcgtctaagagagcgaaggatcaaaaggaaagtgccaacgttca 59282  T
Q  335 tttgaaaagcactgggt 351  Q
    |||||||||||||||||    
T  59283 tttgaaaagcactgggt 59299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 59005 - 59041
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  59005 aataggtcttggaagaacaatagagagcaaaggaatc 59041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 1084 - 951
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 334  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| |||||||||||||||| || ||||||   ||||| || ||||||||||||    
T  1084 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagaaagcgaaagatcgaaagggagttgccaacgttca 985  T
Q  335 tttg-aaaagcactgggtgcttgtacttcattga 367  Q
    |||| ||||||||||||||||||| ||| |||||    
T  984 tttgaaaaagcactgggtgcttgtcctttattga 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 1261 - 1233
Alignment:
Q  37 aataggtcttggaagaacaaaagagagca 65  Q
    |||||||||||||||||||||||||||||    
T  1261 aataggtcttggaagaacaaaagagagca 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 9619 - 9719
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctga 136  Q
    ||||||||||||||||||||||||||||||| ||  || ||||||||| ||||| ||||||||| |||||| |||| |||||||| | |||||| |||||    
T  9619 aataggtcttggaagaacaaaagagagcaaaggacccatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaagtttcaagtgcctctga 9717  T
Q  137 ag 138  Q
    ||    
T  9718 ag 9719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 9826 - 9899
Alignment:
Q  267 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa 340  Q
    ||||||||||| || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||||||||    
T  9826 aagagctgtctctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttcatttgaa 9899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 7679 - 7599
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  7679 aggtcttggaagaaaaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 7599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 37 - 367
Target Start/End: Complemental strand, 2394 - 2053
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag-tctaaagtgcgtctg 135  Q
    ||||||||||||||||| ||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| ||||||| | | |||||  ||||    
T  2394 aataggtcttggaagaataaaagagagcaaaggaaccatcaagaagagtaacct-aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctg 2296  T
Q  136 aag-ccaaagtgcatctg-----atgacgtcatcagaagca-aatccgtcagaagc-aagaccttcagaagc--catttgttcagaagctgtat-aacat 224  Q
    |||    |||||| ||||     ||||| |||||||||||| ||  | |||||||| |||  | ||||||||   ||||  ||||||||| ||| | ||     
T  2295 aagttttaagtgcttctgaagtaatgacatcatcagaagcagaagtcatcagaagcaaagttcatcagaagcaaaatttcatcagaagctatatcatcac 2196  T
Q  225 cagaatctgcaagttgatcagaagattcaacctgaagactc-taagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggt 323  Q
    ||||| || | |||||||||||| |||||| |||||  |||  ||||| |||||  |||| |||| |||||||||||||  ||| ||   ||||| ||||    
T  2195 cagaagctac-agttgatcagaatattcaatctgaaatctcaaaagagttgtctcctgaagttaatctcgtctaagagaacgaaggatcaaaagggaggt 2097  T
Q  324 gccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    |||||||||||||||||||||||||||||| ||| |||||||||    
T  2096 gccaacgttcatttgaaaagcactgggtgcctgtccttcattga 2053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 35597 - 35522
Alignment:
Q  18 agacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 93  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  35597 agacaaagttgatcattttaaaaggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaa 35522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 6305 - 6387
Alignment:
Q  285 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||||| ||| ||   ||||| | |||||||||||||||||||||||||||||||||||| | |||||||    
T  6305 ttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttcatttgaaaagcactgggtgcttgtccctcattga 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 6061 - 6097
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  6061 aataggtcttggaagaacaatagagagcaaaggaatc 6097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 3611 - 3691
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||  ||||||||||| | ||||||    
T  3611 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatccgaagaaatctgcctatgaagt 3691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 46; Significance: 5e-17; HSPs: 4)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 21011 - 20931
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    ||||||||||||||||| ||||||||||| | ||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  21011 aggtcttggaagaacaatagagagcaaataattcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 20931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 11001 - 10966
Alignment:
Q  133 ctgaagccaaagtgcatctgatgacgtcatcagaag 168  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11001 ctgaagccaaaatgcatctgatgacgtcatcagaag 10966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 20902 - 20867
Alignment:
Q  133 ctgaagccaaagtgcatctgatgacgtcatcagaag 168  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20902 ctgaagccaaaatgcatctgatgacgtcatcagaag 20867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 11110 - 11057
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 93  Q
    |||||||||||||||||  |||||||||| | ||||||| ||||||| ||||||    
T  11110 aggtcttggaagaacaattgagagcaaataattcaacaaaaagagaagcctaaa 11057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 12117 - 11983
Alignment:
Q  42 gtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag-tctaaagtgcgtctgaagcc 140  Q
    |||| ||||||||||||||||| ||| |||||||||| ||||||| ||| ||||||||| |||||| |||| ||||||| | | ||||||  |||||| |    
T  12117 gtctcggaagaacaaaagagaggaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaaactgcgtctgaagttttgaagtgctcctgaagac 12019  T
Q  141 aaagtgcatc-----tgatgacgtcatcagaagcaa 171  Q
    ||||||| ||     |||||||||||||||||||||    
T  12018 aaagtgcctctgaagtgatgacgtcatcagaagcaa 11983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 363
Target Start/End: Complemental strand, 11949 - 11820
Alignment:
Q  236 agttgatcagaagattcaacctgaagactctaaga-gctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 333  Q
    |||| |||||||||| ||||||||||  || || | ||||| ||||| ||| |||||| ||||||| ||||||||||| || | |||||| ||||| |||    
T  11949 agttcatcagaagatgcaacctgaagtttcaaataagctgtttattggattcaacctcatctaagaaagagaaagactaaaggaaaggtggcaacgattc 11850  T
Q  334 atttgaaaagcactgggtgcttgtacttca 363  Q
    ||||||||||||  || ||||||| |||||    
T  11849 atttgaaaagcatgggatgcttgtccttca 11820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 35848 - 35770
Alignment:
Q  289 cctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||  ||| || | ||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  35848 cctcgtctaagagaacgaaggattaaaagggaggtaccaacgttcatttgaaaagcactgggtgcttgtccttctttga 35770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 36096 - 36060
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  36096 aataggtcttggaagaacaatagagagcaaaggaatc 36060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 15447 - 15533
Alignment:
Q  143 agtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaa 229  Q
    |||||| |||||||||||||||||||||| | | ||||||||||| |  |||||||| ||||  |||||||||||||| || |||||    
T  15447 agtgcacctgatgacgtcatcagaagcaagttcatcagaagcaagtctatcagaagctatttcatcagaagctgtatatcaccagaa 15533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 12765 - 12838
Alignment:
Q  284 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgt 357  Q
    ||||| ||||||||||| |  ||| || | ||||| |||| |||||||||||||||||||||||||||||||||    
T  12765 tttaatctcgtctaagaaaacgaaggattaaaagggaggtaccaacgttcatttgaaaagcactgggtgcttgt 12838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 69911 - 69840
Alignment:
Q  286 taacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgt 357  Q
    ||||||||||| |||||  ||| || | ||||| |||| ||||||||||||| |||||||||||||||||||    
T  69911 taacctcgtctgagagaacgaaggattaaaagggaggtaccaacgttcatttaaaaagcactgggtgcttgt 69840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 28774 - 28809
Alignment:
Q  322 gtgccaacgttcatttgaaaagcactgggtgcttgt 357  Q
    ||||||||||||||||||||||||||||||||||||    
T  28774 gtgccaacgttcatttgaaaagcactgggtgcttgt 28809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 9115 - 9156
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  9115 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 9156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 16003 - 15962
Alignment:
Q  326 caacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  16003 caacggtcatttgaaaagcactgggtgcttgtccttcattga 15962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 37784 - 37863
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 121  Q
    ||||||| | |||||| |||| |||||| |||||||||| ||||||| |||||| |||||| ||||||||||| ||||||||    
T  37784 aggtcttcgtagaacagaagaaagcaaaagaatcaacaa-aagagaagcctaaa-gcatctgaagaaatctgcctctgaagt 37863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 164760 - 164837
Alignment:
Q  143 agtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtata 220  Q
    |||||| |||||||||||||||||||||| | | |||||| |||| |  |||||||| ||||  ||||||||||||||    
T  164760 agtgcacctgatgacgtcatcagaagcaagttcatcagaaccaagtctatcagaagctatttcctcagaagctgtata 164837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 29788 - 29708
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 367  Q
    ||||||||||||||||  ||| ||   ||||||| ||| |||||||| ||||||||||||| ||||||| ||| |||||||    
T  29788 aacctcgtctaagagaccgaaggatcaaaaggaaagtgtcaacgttcgtttgaaaagcacttggtgcttttacctcattga 29708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 36535 - 36616
Alignment:
Q  94 agcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    ||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  36535 agcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 36616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 353
Target Start/End: Complemental strand, 2280 - 2241
Alignment:
Q  314 aaaggaaggtgccaacgttcatttgaaaagcactgggtgc 353  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  2280 aaagggaggtaccaacgttcatttgaaaagcactgggtgc 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 18361 - 18400
Alignment:
Q  39 taggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  18361 taggttttggaagaacaaaagagagcaaaggaatcaacaa 18400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 7544 - 7469
Alignment:
Q  287 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 362  Q
    ||||| ||||||||||  |||| | | ||||| ||||  ||||| |||||||||||||||||||||||||| ||||    
T  7544 aaccttgtctaagagaacgaaaaattgaaagggaggtatcaacggtcatttgaaaagcactgggtgcttgtccttc 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 5094 - 5013
Alignment:
Q  93 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 170  Q
    |||||||| |||||| |||||||||||| ||||||||| ||||||||  |||||| ||     ||||||||||||||||||||    
T  5094 aagcatctgaagaaaactgcatctgaag-ctaaagtgcttctgaagctgaagtgcctctgaagtgatgacgtcatcagaagca 5013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 23030 - 22992
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  23030 aggtcttggaagaacaatagagagcaaaagaatcaacaa 22992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 2003 - 1965
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatcaa 75  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  2003 aataggtcctggaagaacaaaagagagcaaaggaatcaa 1965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 89812 - 89850
Alignment:
Q  40 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  89812 aggtcttggaagaacaatagagagcaaaggaatcaacaa 89850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 6877 - 7014
Alignment:
Q  40 aggtcttggaagaacaaa-agagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaag 138  Q
    |||||||||||||||||| | ||||||||   |||||||| ||| ||| | ||||||| ||| |||||| ||||  |||||||  |||||||  ||||||    
T  6877 aggtcttggaagaacaaataaagagcaaacacatcaacaaaaagggaagcttaaaagcgtctgaagaaaactgctcctgaagttaaaagtgctcctgaag 6976  T
Q  139 ccaaagtgc-----atctgatgacgtcatcagaagcaa 171  Q
     ||||||||     |  |||||||||||||||||||||    
T  6977 acaaagtgctcctgaagtgatgacgtcatcagaagcaa 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 17352 - 17307
Alignment:
Q  48 gaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 93  Q
    |||||||||||||||||||| |||||||||| |||| || ||||||    
T  17352 gaagaacaaaagagagcaaaggaatcaacaaaaagataagcctaaa 17307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 103917 - 103888
Alignment:
Q  49 aagaacaaaagagagcaaatgaatcaacaa 78  Q
    ||||||||||||||||||||||||||||||    
T  103917 aagaacaaaagagagcaaatgaatcaacaa 103888  T

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Target: scaffold0861 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 4694 - 4726
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  4694 tggaagaacaaaagagagcaaaggaatcaacaa 4726  T

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Target: scaffold0604 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 57 - 1
Alignment:
Q  289 cctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagca 345  Q
    ||||||||||||||  ||| || | ||||| |||| |||||||||||||||||||||    
T  57 cctcgtctaagagaacgaaggattaaaagggaggtaccaacgttcatttgaaaagca 1  T

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Target: scaffold0604; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 305 - 269
Alignment:
Q  37 aataggtcttggaagaacaaaagagagcaaatgaatc 73  Q
    |||||||||||||||||||| |||||||||| |||||    
T  305 aataggtcttggaagaacaatagagagcaaaggaatc 269  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 49681 - 49649
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  49681 tggaagaacaaaagagagcaaaggaatcaacaa 49649  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 25739 - 25771
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  25739 tggaagaacaaaagagagcaaaggaatcaacaa 25771  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 15183 - 15119
Alignment:
Q  284 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactg 348  Q
    ||||||||||| |||||||  ||| || | ||||| |||| |||||||||||||||||| |||||    
T  15183 tttaacctcgtttaagagaacgaaggattaaaagggaggtaccaacgttcatttgaaaaccactg 15119  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 8260 - 8228
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  8260 tggaagaacaaaagagagcaaaggaatcaacaa 8228  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 60379 - 60347
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  60379 tggaagaacaaaagagagcaaaggaatcaacaa 60347  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 39775 - 39743
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  39775 tggaagaacaaaagagagcaaaggaatcaacaa 39743  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 137835 - 137803
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  137835 tggaagaacaaaagagagcaaaggaatcaacaa 137803  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 30618 - 30650
Alignment:
Q  46 tggaagaacaaaagagagcaaatgaatcaacaa 78  Q
    |||||||||||||||||||||| ||||||||||    
T  30618 tggaagaacaaaagagagcaaaggaatcaacaa 30650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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