View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16486_low_6 (Length: 497)

Name: NF16486_low_6
Description: NF16486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16486_low_6
NF16486_low_6
[»] chr8 (57 HSPs)
chr8 (168-480)||(29023108-29023405)
chr8 (274-454)||(28425425-28425605)
chr8 (259-423)||(44926802-44926965)
chr8 (259-449)||(4941739-4941929)
chr8 (274-451)||(3097162-3097339)
chr8 (274-449)||(27649722-27649896)
chr8 (273-450)||(25697917-25698093)
chr8 (259-454)||(33626987-33627182)
chr8 (277-451)||(3467512-3467686)
chr8 (264-455)||(22936745-22936936)
chr8 (274-449)||(36113999-36114173)
chr8 (271-423)||(6399092-6399244)
chr8 (266-449)||(41289016-41289199)
chr8 (285-448)||(42143323-42143486)
chr8 (264-410)||(42148971-42149117)
chr8 (271-423)||(40742279-40742429)
chr8 (264-423)||(440173-440332)
chr8 (272-423)||(8124945-8125095)
chr8 (303-423)||(26243129-26243249)
chr8 (259-410)||(40742085-40742236)
chr8 (284-448)||(24897547-24897710)
chr8 (274-453)||(38114421-38114599)
chr8 (274-445)||(38152137-38152307)
chr8 (271-393)||(43550864-43550986)
chr8 (327-425)||(31201655-31201752)
chr8 (272-452)||(15206670-15206850)
chr8 (270-425)||(3619051-3619205)
chr8 (372-450)||(36121502-36121580)
chr8 (370-450)||(30085596-30085676)
chr8 (374-428)||(6876602-6876656)
chr8 (274-388)||(34342873-34342985)
chr8 (271-360)||(26125545-26125634)
chr8 (372-453)||(30759259-30759340)
chr8 (372-429)||(40792182-40792239)
chr8 (327-423)||(25497721-25497816)
chr8 (372-432)||(36779465-36779524)
chr8 (277-321)||(41981136-41981180)
chr8 (372-423)||(3465424-3465475)
chr8 (277-432)||(30081626-30081780)
chr8 (272-310)||(26243065-26243103)
chr8 (270-307)||(37458403-37458440)
chr8 (383-423)||(35615794-35615834)
chr8 (372-410)||(2071565-2071603)
chr8 (277-311)||(24297687-24297721)
chr8 (381-423)||(26125840-26125882)
chr8 (372-450)||(26491007-26491085)
chr8 (270-312)||(26575807-26575849)
chr8 (277-311)||(41408169-41408203)
chr8 (270-311)||(2026093-2026134)
chr8 (270-311)||(17073707-17073748)
chr8 (270-311)||(17574522-17574563)
chr8 (382-423)||(26575902-26575943)
chr8 (270-311)||(35801788-35801829)
chr8 (382-423)||(45275779-45275820)
chr8 (276-360)||(11126494-11126578)
chr8 (271-311)||(41891915-41891955)
chr8 (259-335)||(45147322-45147398)
[»] chr5 (51 HSPs)
chr5 (168-423)||(41740574-41740829)
chr5 (259-452)||(32454504-32454697)
chr5 (259-453)||(40885177-40885372)
chr5 (259-452)||(40495310-40495502)
chr5 (283-423)||(39987948-39988088)
chr5 (259-450)||(3667821-3668012)
chr5 (277-454)||(8049001-8049178)
chr5 (274-449)||(13253038-13253212)
chr5 (264-451)||(22482161-22482348)
chr5 (259-451)||(35760156-35760348)
chr5 (271-450)||(41834871-41835050)
chr5 (275-451)||(2430250-2430425)
chr5 (277-453)||(7385883-7386059)
chr5 (259-423)||(16158446-16158610)
chr5 (274-453)||(10058056-10058235)
chr5 (278-451)||(5710339-5710511)
chr5 (274-454)||(32030698-32030876)
chr5 (264-453)||(24045803-24045991)
chr5 (271-423)||(3060205-3060355)
chr5 (264-447)||(7714912-7715095)
chr5 (264-451)||(42146280-42146466)
chr5 (271-449)||(9275439-9275617)
chr5 (264-453)||(40791021-40791209)
chr5 (271-450)||(33953856-33954034)
chr5 (271-423)||(4292128-4292280)
chr5 (283-425)||(34106926-34107068)
chr5 (274-451)||(7178760-7178936)
chr5 (264-420)||(27021100-27021256)
chr5 (271-317)||(16843517-16843563)
chr5 (372-453)||(35847841-35847922)
chr5 (294-360)||(28869547-28869613)
chr5 (266-311)||(3747683-3747728)
chr5 (370-423)||(16843607-16843660)
chr5 (270-311)||(40979996-40980037)
chr5 (372-432)||(2694732-2694792)
chr5 (372-452)||(19203957-19204036)
chr5 (339-423)||(23914235-23914319)
chr5 (372-455)||(3747540-3747623)
chr5 (270-312)||(33082423-33082465)
chr5 (382-423)||(4295606-4295647)
chr5 (270-311)||(7071503-7071544)
chr5 (270-311)||(8957979-8958020)
chr5 (270-311)||(11017912-11017953)
chr5 (270-311)||(20069163-20069204)
chr5 (270-311)||(27738036-27738077)
chr5 (270-311)||(31906018-31906059)
chr5 (270-311)||(33386955-33386996)
chr5 (382-423)||(41741604-41741645)
chr5 (381-413)||(4295635-4295667)
chr5 (270-314)||(25256313-25256357)
chr5 (270-314)||(25320102-25320146)
[»] chr2 (53 HSPs)
chr2 (168-451)||(23358127-23358411)
chr2 (259-450)||(7472629-7472819)
chr2 (251-423)||(44619043-44619215)
chr2 (251-453)||(2215208-2215408)
chr2 (258-452)||(9988454-9988648)
chr2 (264-460)||(36548167-36548362)
chr2 (271-452)||(31562640-31562818)
chr2 (274-455)||(39141420-39141600)
chr2 (259-450)||(2213468-2213659)
chr2 (253-450)||(28127242-28127439)
chr2 (278-451)||(1944993-1945166)
chr2 (264-453)||(7296122-7296311)
chr2 (272-449)||(32501961-32502137)
chr2 (271-452)||(36312251-36312431)
chr2 (271-451)||(5916196-5916375)
chr2 (271-447)||(14821137-14821312)
chr2 (264-451)||(8170280-8170466)
chr2 (258-450)||(26207884-26208076)
chr2 (308-423)||(2213658-2213773)
chr2 (270-445)||(42515936-42516110)
chr2 (264-453)||(7295300-7295487)
chr2 (298-453)||(42089480-42089639)
chr2 (264-423)||(28261261-28261420)
chr2 (307-450)||(31224690-31224833)
chr2 (372-448)||(34433263-34433339)
chr2 (259-381)||(25940265-25940387)
chr2 (259-423)||(25747864-25748027)
chr2 (271-454)||(28641616-28641799)
chr2 (259-425)||(8041242-8041406)
chr2 (271-453)||(3853874-3854056)
chr2 (277-423)||(16467066-16467212)
chr2 (338-423)||(45714650-45714735)
chr2 (372-451)||(12110949-12111027)
chr2 (272-423)||(18511077-18511228)
chr2 (277-408)||(27911386-27911517)
chr2 (276-395)||(43436291-43436410)
chr2 (372-449)||(30007509-30007586)
chr2 (339-423)||(41580692-41580776)
chr2 (335-423)||(38600425-38600513)
chr2 (372-423)||(23267346-23267397)
chr2 (398-457)||(27911492-27911551)
chr2 (277-450)||(3602415-3602587)
chr2 (370-426)||(34997215-34997271)
chr2 (270-321)||(2234900-2234950)
chr2 (273-312)||(15283350-15283389)
chr2 (372-451)||(26806210-26806288)
chr2 (270-309)||(37640236-37640275)
chr2 (270-311)||(7474113-7474154)
chr2 (270-311)||(17481374-17481415)
chr2 (382-423)||(32496583-32496624)
chr2 (270-311)||(43341747-43341788)
chr2 (411-452)||(43436264-43436305)
chr2 (270-311)||(43695614-43695655)
[»] chr6 (24 HSPs)
chr6 (259-451)||(13739159-13739350)
chr6 (259-451)||(13744659-13744850)
chr6 (259-453)||(29409205-29409399)
chr6 (271-452)||(33898960-33899141)
chr6 (271-451)||(6208019-6208198)
chr6 (271-448)||(17829957-17830134)
chr6 (274-449)||(31132432-31132606)
chr6 (277-450)||(10826062-10826235)
chr6 (266-423)||(699518-699673)
chr6 (258-410)||(16442347-16442499)
chr6 (271-395)||(16548104-16548228)
chr6 (372-455)||(5584001-5584084)
chr6 (372-451)||(1312395-1312474)
chr6 (372-423)||(21254863-21254914)
chr6 (372-455)||(26274579-26274662)
chr6 (383-450)||(29399750-29399817)
chr6 (372-423)||(32599446-32599497)
chr6 (372-448)||(16121960-16122036)
chr6 (372-451)||(3605708-3605786)
chr6 (372-423)||(15151489-15151540)
chr6 (374-432)||(21455948-21456006)
chr6 (382-423)||(10683843-10683884)
chr6 (270-311)||(31745486-31745527)
chr6 (271-311)||(2935695-2935735)
[»] chr4 (74 HSPs)
chr4 (259-449)||(43781477-43781666)
chr4 (264-448)||(30842075-30842258)
chr4 (258-453)||(51922877-51923072)
chr4 (264-444)||(48407661-48407840)
chr4 (271-449)||(39636735-39636913)
chr4 (277-455)||(43772075-43772253)
chr4 (258-447)||(13183010-13183199)
chr4 (264-452)||(9889290-9889477)
chr4 (258-450)||(26651805-26651997)
chr4 (272-453)||(28986972-28987150)
chr4 (259-455)||(29149259-29149455)
chr4 (271-451)||(46830025-46830205)
chr4 (259-453)||(54150464-54150658)
chr4 (278-450)||(6138577-6138749)
chr4 (263-447)||(9893653-9893837)
chr4 (259-451)||(19592187-19592379)
chr4 (271-450)||(14072453-14072631)
chr4 (271-453)||(16566255-16566437)
chr4 (264-453)||(6505144-6505333)
chr4 (259-451)||(15603298-15603490)
chr4 (271-451)||(32238015-32238194)
chr4 (264-454)||(14564099-14564289)
chr4 (277-450)||(25312671-25312844)
chr4 (259-423)||(49136460-49136624)
chr4 (276-451)||(48550172-48550347)
chr4 (274-450)||(48908228-48908402)
chr4 (264-450)||(26426072-26426257)
chr4 (258-410)||(48550424-48550576)
chr4 (272-451)||(13167476-13167655)
chr4 (277-451)||(49519686-49519863)
chr4 (258-444)||(42944861-42945047)
chr4 (259-395)||(56241847-56241983)
chr4 (264-393)||(2175161-2175290)
chr4 (271-447)||(54152995-54153170)
chr4 (271-423)||(54735635-54735786)
chr4 (271-449)||(14054801-14054979)
chr4 (271-408)||(4954050-4954187)
chr4 (337-453)||(39187750-39187866)
chr4 (271-423)||(14075965-14076116)
chr4 (327-423)||(46926054-46926150)
chr4 (372-444)||(55638718-55638790)
chr4 (271-450)||(31520328-31520506)
chr4 (269-423)||(38693996-38694150)
chr4 (343-452)||(41866176-41866285)
chr4 (370-450)||(5835799-5835878)
chr4 (372-453)||(53532028-53532109)
chr4 (372-416)||(19599487-19599531)
chr4 (271-361)||(30887199-30887289)
chr4 (384-450)||(54655295-54655361)
chr4 (372-417)||(33574229-33574274)
chr4 (270-311)||(45106357-45106398)
chr4 (271-316)||(54655200-54655245)
chr4 (383-451)||(4649885-4649953)
chr4 (273-321)||(55638873-55638921)
chr4 (276-311)||(5025484-5025519)
chr4 (340-423)||(16202504-16202585)
chr4 (372-447)||(45779970-45780044)
chr4 (384-423)||(48556616-48556655)
chr4 (386-453)||(54683453-54683520)
chr4 (376-426)||(38263954-38264004)
chr4 (385-423)||(48407572-48407610)
chr4 (337-426)||(523166-523255)
chr4 (270-311)||(16202614-16202655)
chr4 (382-423)||(22605745-22605786)
chr4 (270-311)||(22605838-22605879)
chr4 (406-451)||(26459852-26459897)
chr4 (382-423)||(28963244-28963285)
chr4 (270-311)||(28963339-28963380)
chr4 (382-423)||(29385432-29385473)
chr4 (270-311)||(30417876-30417917)
chr4 (270-311)||(39733396-39733437)
chr4 (274-311)||(50523350-50523387)
chr4 (382-423)||(51677641-51677682)
chr4 (271-315)||(15619567-15619610)
[»] chr3 (60 HSPs)
chr3 (264-450)||(42318288-42318473)
chr3 (258-453)||(10334090-10334285)
chr3 (264-451)||(38125398-38125584)
chr3 (271-450)||(10853224-10853403)
chr3 (271-452)||(3348208-3348389)
chr3 (258-451)||(38172263-38172456)
chr3 (259-454)||(50664712-50664906)
chr3 (271-452)||(52966764-52966945)
chr3 (259-416)||(53179802-53179958)
chr3 (271-423)||(35930703-35930855)
chr3 (272-451)||(15511332-15511510)
chr3 (259-450)||(26519617-26519808)
chr3 (272-455)||(53074869-53075051)
chr3 (264-455)||(23496282-23496466)
chr3 (271-451)||(35425299-35425477)
chr3 (264-451)||(48189398-48189584)
chr3 (271-452)||(30811487-30811667)
chr3 (271-451)||(20813111-20813290)
chr3 (271-453)||(44939370-44939550)
chr3 (271-411)||(44224727-44224867)
chr3 (271-450)||(38340771-38340949)
chr3 (277-452)||(42475680-42475855)
chr3 (258-449)||(16246054-16246243)
chr3 (274-432)||(23207043-23207199)
chr3 (275-423)||(8424714-8424861)
chr3 (327-453)||(4984602-4984728)
chr3 (259-449)||(21224943-21225133)
chr3 (273-410)||(31084175-31084311)
chr3 (260-363)||(31618931-31619034)
chr3 (372-451)||(55154567-55154646)
chr3 (372-429)||(19877483-19877540)
chr3 (270-448)||(45423728-45423905)
chr3 (372-454)||(52813281-52813363)
chr3 (372-426)||(34561174-34561228)
chr3 (271-423)||(49526653-49526805)
chr3 (372-423)||(14651086-14651137)
chr3 (271-334)||(22736946-22737009)
chr3 (270-311)||(30811288-30811329)
chr3 (382-423)||(48253879-48253920)
chr3 (279-316)||(55087593-55087630)
chr3 (372-419)||(29716674-29716721)
chr3 (274-361)||(32357479-32357566)
chr3 (398-453)||(41459292-41459347)
chr3 (271-321)||(14959684-14959734)
chr3 (397-451)||(31618368-31618422)
chr3 (270-312)||(33329436-33329478)
chr3 (397-447)||(35930879-35930929)
chr3 (259-361)||(37117556-37117658)
chr3 (277-311)||(37698485-37698519)
chr3 (270-312)||(44610311-44610352)
chr3 (372-426)||(53567998-53568051)
chr3 (384-449)||(5045970-5046035)
chr3 (270-311)||(11264277-11264318)
chr3 (270-311)||(28884258-28884299)
chr3 (270-311)||(39252061-39252102)
chr3 (270-311)||(42074914-42074955)
chr3 (382-423)||(45488485-45488526)
chr3 (270-311)||(48253974-48254015)
chr3 (270-311)||(51230284-51230325)
chr3 (271-311)||(53078323-53078363)
[»] scaffold0369 (1 HSPs)
scaffold0369 (259-451)||(8402-8594)
[»] chr7 (49 HSPs)
chr7 (271-456)||(3622398-3622583)
chr7 (259-423)||(9456079-9456242)
chr7 (274-448)||(39391083-39391257)
chr7 (271-448)||(48134566-48134742)
chr7 (258-454)||(37562543-37562739)
chr7 (264-426)||(47217509-47217671)
chr7 (274-451)||(34010329-34010504)
chr7 (273-450)||(3342778-3342955)
chr7 (271-452)||(37639416-37639597)
chr7 (259-452)||(43737881-43738074)
chr7 (277-452)||(39977544-39977719)
chr7 (276-450)||(41715648-41715822)
chr7 (261-448)||(43631642-43631828)
chr7 (274-452)||(34365924-34366101)
chr7 (271-452)||(3375476-3375657)
chr7 (271-448)||(47021905-47022082)
chr7 (277-451)||(48459702-48459876)
chr7 (275-444)||(44967349-44967518)
chr7 (272-452)||(10371900-10372080)
chr7 (276-451)||(32186931-32187106)
chr7 (271-449)||(38230054-38230232)
chr7 (271-423)||(12632054-12632206)
chr7 (277-419)||(3750678-3750820)
chr7 (283-451)||(42904551-42904719)
chr7 (297-451)||(37008296-37008447)
chr7 (372-450)||(19097484-19097562)
chr7 (271-404)||(32205913-32206044)
chr7 (270-427)||(40903135-40903291)
chr7 (264-321)||(47301630-47301687)
chr7 (274-423)||(34010932-34011082)
chr7 (279-423)||(36920149-36920293)
chr7 (372-451)||(24770854-24770933)
chr7 (372-447)||(46541687-46541762)
chr7 (277-447)||(386428-386597)
chr7 (274-363)||(19095926-19096013)
chr7 (384-429)||(12964697-12964742)
chr7 (382-423)||(25472152-25472193)
chr7 (277-414)||(42740384-42740521)
chr7 (259-459)||(42752126-42752326)
chr7 (342-456)||(39634103-39634217)
chr7 (270-311)||(4035919-4035960)
chr7 (372-432)||(2839377-2839437)
chr7 (382-425)||(25472135-25472178)
chr7 (259-310)||(37886854-37886905)
chr7 (373-423)||(12212440-12212490)
chr7 (270-311)||(26826952-26826993)
chr7 (382-423)||(37371339-37371380)
chr7 (270-311)||(41065340-41065381)
chr7 (258-332)||(12964412-12964483)
[»] chr1 (54 HSPs)
chr1 (274-453)||(35536064-35536242)
chr1 (271-451)||(42850176-42850356)
chr1 (168-395)||(291730-291949)
chr1 (259-453)||(47123363-47123557)
chr1 (259-452)||(12468190-12468381)
chr1 (259-451)||(43728835-43729026)
chr1 (264-454)||(35569156-35569346)
chr1 (258-451)||(31223350-31223543)
chr1 (276-456)||(26058235-26058415)
chr1 (274-456)||(12247412-12247593)
chr1 (272-453)||(13055988-13056168)
chr1 (274-451)||(1199819-1199996)
chr1 (272-449)||(11023289-11023465)
chr1 (271-451)||(50977297-50977476)
chr1 (264-451)||(20800234-20800421)
chr1 (274-445)||(40229433-40229604)
chr1 (270-455)||(10470578-10470762)
chr1 (258-451)||(48510884-48511077)
chr1 (271-451)||(7826311-7826491)
chr1 (272-451)||(6166100-6166278)
chr1 (271-445)||(45710038-45710211)
chr1 (271-448)||(36205180-36205357)
chr1 (273-449)||(5410631-5410806)
chr1 (271-450)||(6464597-6464775)
chr1 (297-452)||(27801608-27801763)
chr1 (270-457)||(50406118-50406305)
chr1 (275-449)||(25230000-25230173)
chr1 (272-423)||(15884216-15884368)
chr1 (271-408)||(4369803-4369939)
chr1 (283-451)||(34718452-34718620)
chr1 (273-453)||(13931614-13931792)
chr1 (271-321)||(31933716-31933766)
chr1 (282-447)||(9447533-9447696)
chr1 (372-459)||(29441274-29441361)
chr1 (277-451)||(25061221-25061395)
chr1 (372-432)||(15576544-15576604)
chr1 (342-410)||(16556295-16556362)
chr1 (372-451)||(7765241-7765319)
chr1 (372-454)||(13344863-13344944)
chr1 (271-380)||(11051339-11051447)
chr1 (372-453)||(40352481-40352561)
chr1 (372-429)||(43134540-43134597)
chr1 (270-311)||(46033210-46033251)
chr1 (411-451)||(291704-291744)
chr1 (376-423)||(49242967-49243014)
chr1 (386-448)||(6061246-6061308)
chr1 (372-425)||(4347064-4347116)
chr1 (277-314)||(36118120-36118157)
chr1 (270-311)||(41512729-41512770)
chr1 (382-423)||(41512823-41512864)
chr1 (270-311)||(42137170-42137211)
chr1 (372-432)||(30557624-30557683)
chr1 (271-315)||(40821814-40821858)
chr1 (385-425)||(46033129-46033169)
[»] scaffold0983 (1 HSPs)
scaffold0983 (276-450)||(2225-2399)
[»] scaffold0381 (1 HSPs)
scaffold0381 (264-452)||(9069-9256)
[»] scaffold0217 (1 HSPs)
scaffold0217 (273-453)||(1981-2161)
[»] scaffold0005 (1 HSPs)
scaffold0005 (264-454)||(253086-253276)
[»] scaffold0007 (1 HSPs)
scaffold0007 (271-450)||(29080-29258)
[»] scaffold0394 (2 HSPs)
scaffold0394 (372-453)||(5784-5865)
scaffold0394 (271-315)||(5918-5967)
[»] scaffold0041 (1 HSPs)
scaffold0041 (270-427)||(46727-46883)
[»] scaffold0172 (1 HSPs)
scaffold0172 (372-452)||(15213-15292)
[»] scaffold0014 (1 HSPs)
scaffold0014 (335-423)||(118394-118482)
[»] scaffold0184 (1 HSPs)
scaffold0184 (270-311)||(9254-9295)
[»] scaffold0168 (1 HSPs)
scaffold0168 (386-423)||(32058-32095)
[»] scaffold0097 (2 HSPs)
scaffold0097 (382-423)||(32446-32487)
scaffold0097 (270-311)||(32541-32582)
[»] scaffold0068 (1 HSPs)
scaffold0068 (382-423)||(38384-38425)
[»] scaffold0003 (1 HSPs)
scaffold0003 (270-311)||(301745-301786)


Alignment Details
Target: chr8 (Bit Score: 168; Significance: 8e-90; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 168 - 480
Target Start/End: Original strand, 29023108 - 29023405
Alignment:
Q  168 atcactacacattaaaaaatacagctttggcaaatgtgatataattgnnnnnnnnnnn-gacaaaatataagaaattctatatttaggggcgtttgatca 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||| |||||||| ||||| |||    
T  29023108 atcactacacgttaaaaaatacagctttggcaaatgtgatataattgttttttttttttgacaaaatataagaaattctatttttaggggtgtttggtca 29023207  T
Q  267 ttttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatct 366  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||     
T  29023208 ttttacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataacaatcaattttaaacaagtgtatccaaatataaaccaattcatc- 29023306  T
Q  367 catattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaaatttagcatt 466  Q
                   |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||    
T  29023307 ---------------tcaaaatcaattctctcaaactcaattctatcaaaatcaattttcgccaccaccataccgaacacacactaaaaaatttagcatt 29023391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 274 - 454
Target Start/End: Complemental strand, 28425605 - 28425425
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||| |||  ||||||||||||| ||||| ||||||| |||| | ||    
T  28425605 ttcaaaatcaattttgattcaaactatccaaacaacgtcaactcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactc 28425506  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    |||||||| |||||||||||||  |||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  28425505 acttttaaccaaaatcaattctaacaaaatcaattctatcaaaatcaattttcgccaccgtcataccaaacacacactaag 28425425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 259 - 423
Target Start/End: Original strand, 44926802 - 44926965
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| || || ||    
T  44926802 tttggtcattttacattcaaaattaattttgattcaaactatccaaataacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatca 44926900  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||| |||| | |||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  44926901 attcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaactcaatt 44926965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 259 - 449
Target Start/End: Complemental strand, 4941929 - 4941739
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||| ||   |||||||| || | |||||||| ||||| ||    
T  4941929 tttggtcattttacattcaaaatcaattttaattcaaattattcaaacaacatcaactcataagaatcgcttttaaataattttatccaaacataaatca 4941830  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    ||||| |||| | |||||||||||||||||||||||| |||||||||||| ||||| |||||||| | | |||| ||||||||||||||||    
T  4941829 attcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattatatcagaatcaattctagccaccgccataccaaacacaca 4941739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 274 - 451
Target Start/End: Complemental strand, 3097339 - 3097162
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||  ||||||||   ||| |||||||| ||||| |||||||| ||| | ||    
T  3097339 ttcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacataaatcaattcatatcaaactc 3097240  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| |||| ||  |||  | ||||||||||||||||    
T  3097239 acttttaaccaaaatcaattctctcaaactcaattctatcaaaattaattctcaccactgctataccaaacacacact 3097162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 274 - 449
Target Start/End: Original strand, 27649722 - 27649896
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||  |||||||| ||| |||  | ||||||| ||  | ||    
T  27649722 ttcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaatgagtgtatctaaacatattc-aattcatatccaaatc 27649820  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||  ||||||||||||    
T  27649821 acttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgtcaccgcccaaccaaacacaca 27649896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 273 - 450
Target Start/End: Complemental strand, 25698093 - 25697917
Alignment:
Q  273 attcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatatt 372  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||  ||||||||| |||| |||||||| || || |||||||  ||  | |    
T  25698093 attcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaacat-aatcaattcacatccaact 25697995  T
Q  373 cacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||| | ||||||| |||||||    
T  25697994 cacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgctataccaagcacacac 25697917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 259 - 454
Target Start/End: Complemental strand, 33627182 - 33626987
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||  |||||||   ||||||||||||| ||||| ||    
T  33627182 tttgataattttacattcaaaatcgattttgattcaaactatccaaacaacattaactcataagaatcacttttagtaaagtgtatccaaacataaatca 33627083  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    |||| | ||  | ||| ||||||  |||||||||||| |||||||||||||||||||||||||||  |  |||| ||  |||||||||||||||||    
T  33627082 attcttatccaactcagttttaaataaaatcaattctttcaaactcaattctatcaaaatcaattccctccaccgccgaaccaaacacacactaag 33626987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 277 - 451
Target Start/End: Original strand, 3467512 - 3467686
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||| ||  ||||||||| || | |||||||| | ||| |||||||  |   | |||||    
T  3467512 aaaatcaattttgattcaaactatccaaccaacatcaattcataagaatcacttttaaataaatatatccaaacagaaatcaattcacattcaactcact 3467611  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  3467612 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 3467686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 264 - 455
Target Start/End: Complemental strand, 22936936 - 22936745
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| || |||||||| ||| ||||||| |||||||||||||||||||||  || || ||  |||| |||  ||||||||||||| ||||| |||||||    
T  22936936 tcattatatattcaaaaccaaatttgattcaaactatccaaacaacatcaatccacaagaatcacttctaataaagtgtatccaaacataaatcaattca 22936837  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
      |   | |||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  22936836 cattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattctcgccaccgccataccaaacacacactaaga 22936745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 274 - 449
Target Start/End: Complemental strand, 36114173 - 36113999
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||||||| ||  |||||||||| |||||||||||| || |||||||  |  ||| | |     
T  36114173 ttcaaaatcaattttgattcaaattatccaaacaatatcaactcataagaatcacttttaaacgagtgtatccaaacat-aaccaatctacatcaaactt 36114075  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||  | ||  |||||||||||||||    
T  36114074 acttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccgccgtcataccaaacacaca 36113999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 271 - 423
Target Start/End: Complemental strand, 6399244 - 6399092
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||  ||||||||   |||||||| ||| ||||| |||||||  ||| |    
T  6399244 acattcaaaatcaattttgattaaaattatccaaacaacatcaactcataagaatcacttttaagtgagtgtatcgaaacataaatcaattcacatcaaa 6399145  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     |||||||||| || |||||||||| ||||||||||||||| || ||||||||    
T  6399144 ctcacttttaaccataatcaattctatcaaactcaattctaccagaatcaatt 6399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 266 - 449
Target Start/End: Complemental strand, 41289199 - 41289016
Alignment:
Q  266 attttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca-t 364  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||| ||  |||||||   ||||||||||||| ||||| |||||||      
T  41289199 attttgcattcaaaatcaattttgattcaaactatccaaacaacatcaacctataagaatcacttttagtaaagtgtatccaaacataaatcaattcaca 41289100  T
Q  365 ctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
     ||| | ||||||||||| |||||||||||| |||||||||||||| |||||||||||| ||| | || ||| ||||||| ||||    
T  41289099 atca-actcacttttaattaaaatcaattctctcaaactcaattctgtcaaaatcaattctcgccgccgccaaaccaaacccaca 41289016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 285 - 448
Target Start/End: Complemental strand, 42143486 - 42143323
Alignment:
Q  285 ttttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatca 384  Q
    ||||| || ||| |||||||||||| ||||||||||| ||  ||||||||| |||| |||||||| ||||| ||||||| |||| | ||||||||||  |    
T  42143486 ttttgtttcaaattatccaaacaacgtcaactcataagaatcacttttaaataagtttatccaaacataaatcaattcacctcaaactcacttttaacta 42143387  T
Q  385 aaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
    ||||||||| | |||||||||||| ||||| |||||||| ||| |||| |||||||||||||||    
T  42143386 aaatcaattttctcaaactcaattatatcataatcaattctcgccaccgccataccaaacacac 42143323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 264 - 410
Target Start/End: Original strand, 42148971 - 42149117
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||  ||  ||||||||| |||| |||||||| ||||| |||||||    
T  42148971 tcattttacattcaaaatcaattttgattcaaattatctaaacaacatcaactcatacgaatcacttttaaataagtctatccaaacataaatcaattca 42149070  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattct 410  Q
     |||| | |||||||||| ||||||||||| | ||| | ||||||||    
T  42149071 cctcaaactcacttttaaccaaaatcaattatatcagaatcaattct 42149117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 271 - 423
Target Start/End: Complemental strand, 40742429 - 40742279
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||||||| ||  ||||  | |  |||||||||||| ||||| |||||||  ||| |    
T  40742429 acatttaaaatcaattttgatttaaaatatccaaacatcatcaactcataagaatcactt--acattagtgtatccaaacataaatcaattcagatcaaa 40742332  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     ||||||||||  |||||||||||| | |||||||||||||||||||||||||    
T  40742331 ctcacttttaacgaaaatcaattcttttaaactcaattctatcaaaatcaatt 40742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 423
Target Start/End: Complemental strand, 440332 - 440173
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| |||||||||||||| |||||||| || ||||||||||||| | ||||||||| ||  | ||||||   | |||||||||| ||||| |||||||    
T  440332 tcattatacattcaaaatcagttttgattcaatctatccaaacaacgttaactcataagaatcatttttaactgaatgtatccaaacataaatcaattca 440233  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
      ||  | |||| ||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  440232 catccaactcacatttaaccaaaatcaattctctcagactcaattctatcaaaatcaatt 440173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 423
Target Start/End: Original strand, 8124945 - 8125095
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||| ||| ||  |||||||||  |||||||||||| || || |||||||  ||| |     
T  8124945 catttaaaatcaattttgattcaaactatccaaacaacttcaactcctaagaatcacttttaaatgagtgtatccaaacat-aatcaattcacatcaaac 8125043  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||| ||| ||||||||||||| |||||||| |||| | |||||||||||    
T  8125044 tcacttctaaccaaaatcaattctctcaaactcgattcaaccaaaatcaatt 8125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 423
Target Start/End: Original strand, 26243129 - 26243249
Alignment:
Q  303 aaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaac 402  Q
    ||||| || |||||||||| ||  |||||||||||| | |||||||| ||||| |||||||| ||| | ||||||||||  |||||||||||| | ||||    
T  26243129 aaacatcaccaactcataagaatcacttttaaacaattatatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaattctcttaaac 26243228  T
Q  403 tcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||||||    
T  26243229 tcaattctatcaaaatcaatt 26243249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 410
Target Start/End: Original strand, 40742085 - 40742236
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    ||||||||||  |||||||||||||| ||| ||| |||  |||||||||| |||||||||||| ||  | |||||   ||||||||||||| ||||| ||    
T  40742085 tttgatcattacacattcaaaatcaagtttcattcaaatcatccaaacaatatcaactcataagaatcaattttattaaagtgtatccaaacataaatca 40742184  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattct 410  Q
    |||||  ||  | |||||||||| ||||||||||||| ||||||||||||||    
T  40742185 attcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 40742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 448
Target Start/End: Complemental strand, 24897710 - 24897547
Alignment:
Q  284 attttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatc 383  Q
    ||||||||| ||| |||||||||||||||||||||||| ||  | ||||||| || |||||||||| ||||  | |||||| ||  | |||||||||| |    
T  24897710 attttgattcaaattatccaaacaacatcaactcataagaatcaattttaaataaatgtatccaaacataattc-attcatatccaactcacttttaacc 24897612  T
Q  384 aaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
    ||||||||||||   |||||||||| |||||||||||||| |   | || |||||||||||||||    
T  24897611 aaaatcaattctcataaactcaattttatcaaaatcaattcttaccgccgccataccaaacacac 24897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 453
Target Start/End: Original strand, 38114421 - 38114599
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    |||||||||||||||  ||  || ||| |||||||| ||||||||||| ||  ||||  || | |||||||||||| |||| | ||||||  ||  | |     
T  38114421 ttcaaaatcaatttttgttcgaaatattcaaacaacctcaactcataagaatcacttgaaaccgagtgtatccaaacataatc-aattcacatccaactt 38114519  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| |||| ||  |||| ||| ||||||||||||||||    
T  38114520 acttttaaccaaaatcaattctctcaaactcaattctatcaaaataaattctcaccaccgccaaaccaaacacacactaa 38114599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 445
Target Start/End: Complemental strand, 38152307 - 38152137
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||  | ||||||  || | | |||||| ||||| ||||| |  ||| | ||    
T  38152307 ttcaaaatcaattttgatttaaagtatccaaaccacatcaactcataagaatcatttttaagtaaatatttccaaacataaatcaatttacatcaaactc 38152208  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaaca 445  Q
    || |||||  |||||||||| | ||||||| ||||||||||||||||||| ||  | |||||| ||||||||    
T  38152207 ac-tttaactaaaatcaattttctcaaacttaattctatcaaaatcaattctcaccgccaccaaaccaaaca 38152137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 43550864 - 43550986
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| || || ||  ||||||||  ||||||||||||| ||||| |||||||  |   |    
T  43550864 acattcaaaatcaattttgattcaaattatccaaacaacatcaacccacaagaatcacttttaataaagtgtatccaaacataaatcaattcacattcaa 43550963  T
Q  371 ttcacttttaatcaaaatcaatt 393  Q
     |||||||||| |||||||||||    
T  43550964 ctcacttttaaccaaaatcaatt 43550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 425
Target Start/End: Original strand, 31201655 - 31201752
Alignment:
Q  327 acttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatttt 425  Q
    |||||||| ||| || ||||||| ||||| |||||||||| | |||| |||||||| ||||||||||||||||||||||||| ||| ||| ||||||||    
T  31201655 acttttaagcaaatgaatccaaacataaatcaattcatctta-attcgcttttaattaaaatcaattctgtcaaactcaattttataaaactcaatttt 31201752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 452
Target Start/End: Original strand, 15206670 - 15206850
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    ||||||||||||||||||    |||||||||||||||||| || |  ||| ||  |||| |||   | |||||||||| ||||| |||||||  |   |     
T  15206670 cattcaaaatcaattttgggccaaactatccaaacaacatgaatttttaagaatcacttctaagtcaatgtatccaaacataaatcaattcacattcaac 15206769  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||| |||| ||  ||||||   |||||||||||||||    
T  15206770 tcacttttacccaaaatcaattttgtcaaactcaattctatcaaaattaattctctccaccactgaaccaaacacacacta 15206850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 270 - 425
Target Start/End: Complemental strand, 3619205 - 3619051
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcat 369  Q
    |||||| |||||||||||||||| ||||||||||||||||||  | | |||| ||  ||||| | |  | |||||||||| | ||| |||||   ||||     
T  3619205 tacatttaaaatcaattttgattcaaactatccaaacaacatacattgataagaatcactttcatattaatgtatccaaacacaaatcaatttcactca- 3619107  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatttt 425  Q
    | |||||||| |||| |||||||||  ||||| |||||||||||||||||||||||    
T  3619106 actcacttttgatcagaatcaattcattcaaaatcaattctatcaaaatcaatttt 3619051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 36121580 - 36121502
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||||| ||||||||||||  | ||||||||||||||||||||||||| ||| |||| |  ||||||||||||||    
T  36121580 tcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgacaccgctgtaccaaacacacac 36121502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 450
Target Start/End: Complemental strand, 30085676 - 30085596
Alignment:
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||||||| ||||||||||||| | |||||||||| |||||||||||||| ||  | || | |||||||||||||||    
T  30085676 attcacttttaaccaaaatcaattctcttaaactcaattatatcaaaatcaattctcaccgccgctataccaaacacacac 30085596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 6876656 - 6876602
Alignment:
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgt 428  Q
    |||||||||||||||||||||||| |||||||||||||| || || |||||||||    
T  6876656 acttttaatcaaaatcaattctgttaaactcaattctataaagattaattttcgt 6876602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 34342985 - 34342873
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||| |||| ||  ||||||||| || | |||||||| | ||| |||||||| || || ||    
T  34342985 ttcaaaatcaattttgattcaaattatccaaacaacatccact-ataagaatcacttttaaataaatttatccaaacaaaaatcaattcatatc-tactc 34342888  T
Q  374 acttttaatcaaaat 388  Q
    |||||||| ||||||    
T  34342887 acttttaaccaaaat 34342873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 26125545 - 26125634
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaat 360  Q
    |||||||||||||||||||||||||||  ||||||||  |||||||||||| ||  | ||||| |  |||||||||||| ||||| ||||    
T  26125545 acattcaaaatcaattttgatttaaaccgtccaaacattatcaactcataagaatcatttttacattagtgtatccaaacataaatcaat 26125634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 453
Target Start/End: Complemental strand, 30759340 - 30759259
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||||||| ||||||||||||| |||||||||||| ||| |||||||||| |   || | ||| ||||||||||||||||    
T  30759340 tcacttttaaccaaaatcaattctctcaaactcaattatattaaaatcaattcttcccatcgccaaaccaaacacacactaa 30759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 40792239 - 40792182
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtc 429  Q
    |||||||||||||||||||||| | ||||| |||||| ||| ||||||||||||||||    
T  40792239 tcacttttaatcaaaatcaattatatcaaaatcaattttattaaaatcaattttcgtc 40792182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 423
Target Start/End: Original strand, 25497721 - 25497816
Alignment:
Q  327 acttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||| ||||||||||||| |||| | ||||||  ||  | |||||||||| |||||||||||||   |||||||||| ||||||||||||||    
T  25497721 acttttaaataagtgtatccaaacataatc-aattcacatccaactcacttttaaccaaaatcaattctcctaaactcaattttatcaaaatcaatt 25497816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 36779465 - 36779524
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacc 432  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||||| ||||||||    
T  36779465 tcacttttaatcaaaatcaattct-acaaaatcaattatatcaaaatcaattctcgtcacc 36779524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 41981136 - 41981180
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataa 321  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  41981136 aaaatcaattttgattcaaagtatccaaacaacatcaactcataa 41981180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 3465475 - 3465424
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||| ||| ||||||||||||  |||||||||||||||||||||||||||    
T  3465475 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 3465424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 432
Target Start/End: Complemental strand, 30081780 - 30081626
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    ||||||||||||||   |||||||||||||||||||| | ||||| || | |||||     ||  |||||||| ||||| |||||||  | | | |||||    
T  30081780 aaaatcaattttgaaacaaactatccaaacaacatcagcccataagaattgcttttgtgtcagcttatccaaacataaatcaattcacttta-actcact 30081682  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacc 432  Q
    |||||  |||||||||| |  |||| |||||| |||||||||||||||||||||||    
T  30081681 tttaactaaaatcaattttcacaaaatcaattttatcaaaatcaattttcgtcacc 30081626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 26243065 - 26243103
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaaca 310  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  26243065 cattcaaaatcaattttgattcaaactatccaaacaaca 26243103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 37458440 - 37458403
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaaca 307  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  37458440 tacattcaaaatcaattttgattcaaactatccaaaca 37458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 423
Target Start/End: Original strand, 35615794 - 35615834
Alignment:
Q  383 caaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  35615794 caaaatcaatcttgtcaaactcaattctatcaaaatcaatt 35615834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 410
Target Start/End: Complemental strand, 2071603 - 2071565
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattct 410  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  2071603 tcacttttagtcaaaatcaattctgtcaaaatcaattct 2071565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 311
Target Start/End: Complemental strand, 24297721 - 24297687
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||||||||||||| ||||||||||||||||||    
T  24297721 aaaatcaattttgattcaaactatccaaacaacat 24297687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 423
Target Start/End: Original strand, 26125840 - 26125882
Alignment:
Q  381 atcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||||||||| | |||||||||||||||||||| ||||    
T  26125840 atcaaaatcaattctcttaaactcaattctatcaaaattaatt 26125882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 26491007 - 26491085
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||||| |||||||||||||  |||| |||||| |  || |||||||| | |||||| ||| |||||||||||||    
T  26491007 tcacttttaaccaaaatcaattctaccaaaatcaattttgacagaatcaattctagtcaccgccacaccaaacacacac 26491085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 312
Target Start/End: Original strand, 26575807 - 26575849
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatc 312  Q
    ||||||||||| ||||||||||  |||||||||||||||||||    
T  26575807 tacattcaaaagcaattttgatcaaaactatccaaacaacatc 26575849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 311
Target Start/End: Original strand, 41408169 - 41408203
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||||||||||||||||||||| ||||||||||    
T  41408169 aaaatcaattttgatttaaactattcaaacaacat 41408203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 2026093 - 2026134
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  2026093 tacattcaaaatcaattttttttaaaactatccaaacaacat 2026134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 17073748 - 17073707
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  17073748 tacattcaaaaacaattttgataaaaactatccaaacaacat 17073707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 17574522 - 17574563
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  17574522 tacattcaaaaacaattttgataaaaactatccaaacaacat 17574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 26575902 - 26575943
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||| ||| | |||||||||||||||||||||    
T  26575902 tcaaaatcaattctatcagaatcaattctatcaaaatcaatt 26575943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 35801829 - 35801788
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  35801829 tacattcaaaaacaattttgataaaaactatccaaacaacat 35801788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 45275820 - 45275779
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  45275820 tcaaaatcaattctgtcagaatcaattctatcagaatcaatt 45275779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 11126494 - 11126578
Alignment:
Q  276 caaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaat 360  Q
    |||| |||||||||||| |||||||||||||||||  ||||||| | ||  |||| |  | ||||||||||||| ||||| ||||    
T  11126494 caaactcaattttgattcaaactatccaaacaacacaaactcatgaaaatcacttatttataagtgtatccaaacataaatcaat 11126578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 41891955 - 41891915
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||| ||||||||||||||||| ||||| ||||||||||||    
T  41891955 acatccaaaatcaattttgattcaaactgtccaaacaacat 41891915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 45147398 - 45147322
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaa 335  Q
    ||||||||||| |  ||||||||||||||||||| ||  ||| ||||||| ||||||| |||| ||  |||||||||    
T  45147398 tttgatcatttaatgttcaaaatcaattttgattcaagttattcaaacaatatcaacttataagaatcacttttaaa 45147322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 8e-87; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 168 - 423
Target Start/End: Complemental strand, 41740829 - 41740574
Alignment:
Q  168 atcactacacattaaaaaatacagctttggcaaatgtgatataattgnnnnnnnnnnngacaaaatataagaaattctatatttaggggcgtttgatcat 267  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||            |||||||||||||||||||||| |||||||| ||||| ||||    
T  41740829 atcactacacgttaaaaaatacagctttgacaaatgtgatataattttttatttttttgacaaaatataagaaattctatgtttaggggtgtttggtcat 41740730  T
Q  268 tttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctc 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||| |||||||||||||||||    
T  41740729 tttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaatcacttttaaacaagtgtattcaaacataaaccaattcatctc 41740630  T
Q  368 atattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    | | |||| | ||||||||||||||||| |||||||||||||||||||||||||||    
T  41740629 aaactcacctataatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 41740574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 259 - 452
Target Start/End: Original strand, 32454504 - 32454697
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| || || ||    
T  32454504 tttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatca 32454602  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattct-atcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||||| |||| | |||||||||| ||||||||||||| |||||||||||||| ||||||||||||| ||| |||| |||||||||||||||||||    
T  32454603 attcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctaatcaaaatcaattctcgccaccgccataccaaacacacacta 32454697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 259 - 453
Target Start/End: Original strand, 40885177 - 40885372
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaact-acttttaaacaagtgtatccaaatataaacc 357  Q
    ||||||||||  | |||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||||||||||| |||||| ||||| |    
T  40885177 tttgatcattacatattcaaaatcaattttgattcaaactatccaaacaatatcaactcataaaaactcacttttaaacaagtgtgtccaaacataaatc 40885276  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    ||||||  ||  | |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||  |||| ||||||||||||||||||||    
T  40885277 aattcacatccaactcacttttaatcaaaatcaattctcttaaactcaattctaacaaaatcaattttcaccaccgccataccaaacacacactaa 40885372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 259 - 452
Target Start/End: Complemental strand, 40495502 - 40495310
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||  ||||||||| ||||||||||||| ||||| ||    
T  40495502 tttgatcattgtacattccaaatcaattttgatttaaactattcaaacaa-atcaactcataaaaatcacttttaaaaaagtgtatccaaacataaatca 40495404  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||| |  ||| | |||||||||| ||||||||||| | ||||||||||||||||||||||||||| |   | || |||||||||||||||||||    
T  40495403 atttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattcttcccgccgccataccaaacacacacta 40495310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 283 - 423
Target Start/End: Complemental strand, 39988088 - 39987948
Alignment:
Q  283 aattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaat 382  Q
    ||||||||||||||  ||||||||||||||||||||||| ||  ||||||||| ||||||||||||| ||||| ||||||| |||| | ||||||||||     
T  39988088 aattttgatttaaatcatccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactcacttttaac 39987989  T
Q  383 caaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  39987988 caaaatcaattctctcaaactcaattctatcaaaatcaatt 39987948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 259 - 450
Target Start/End: Original strand, 3667821 - 3668012
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||| ||  ||||||||   |||||||||||| ||||| ||    
T  3667821 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 3667920  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||  |   | |||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||  |||||| |||||||||||||||    
T  3667921 attcacattcaactcactttttaacaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccactataccaaacacacac 3668012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 277 - 454
Target Start/End: Complemental strand, 8049178 - 8049001
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||| |||||||||||||||  |||||||||||| |||||||||| ||  ||||||||| ||||||||||||| ||||| ||||| | |||| | |||||    
T  8049178 aaaagcaattttgatttaaatcatccaaacaacaacaactcataagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactcact 8049079  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| ||  | || | |||||||| ||||||||||    
T  8049078 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccgccgctataccaaagacacactaag 8049001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 274 - 449
Target Start/End: Complemental strand, 13253212 - 13253038
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| ||  |||||||||  |||||||||||| |||| | ||||||| |   | ||    
T  13253212 ttcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttttaaatgagtgtatccaaacataatc-aattcatattcaactc 13253114  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||  ||||||||||||    
T  13253113 acttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgccaccgcccaaccaaacacaca 13253038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 22482161 - 22482348
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| || |  ||  ||||||||  ||||||||||||| ||||| |||||||    
T  22482161 tcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattca 22482260  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
      |   | |||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||  | || ||||||||||||||||||    
T  22482261 cattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccataccaaacacacact 22482348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 35760156 - 35760348
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||| ||  | ||||||   |||||||||||| ||||| ||    
T  35760156 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcagttttaattgagtgtatccaaacataaatca 35760255  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||  |   | |||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||  |||| | ||||||||||||||||    
T  35760256 attcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacacacact 35760348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 271 - 450
Target Start/End: Original strand, 41834871 - 41835050
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| || ||| ||  |||| ||   ||||||||||||| ||||| |||||||  ||  |    
T  41834871 acattcaaaatcaattttcattcaaactatccaaacaacatcaattcgtaagaatcacttctagtaaagtgtatccaaacataaatcaattcacttccaa 41834970  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     |||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||  |||| |||||||||||||||||    
T  41834971 ctcacttttaaccaaaatcaattctctcaaactgaattctatcaaaatcaattctccccaccgccataccaaacacacac 41835050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 275 - 451
Target Start/End: Complemental strand, 2430425 - 2430250
Alignment:
Q  275 tcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattca 374  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||  |||| ||   ||||||||||||| |||| | ||||||| |   | |||    
T  2430425 tcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattgaagtgtatccaaacataatc-aattcatgttcaactca 2430327  T
Q  375 cttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||| |||| ||| |||| |||||||||| |||||||    
T  2430326 cttttaaccaaaatcaattctctcaaactcaattccatcaaaatgaattctcgccaccgccataccaaatacacact 2430250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 277 - 453
Target Start/End: Complemental strand, 7386059 - 7385883
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||  ||||||||| ||||||||  ||| ||||| ||||||| |||| |  ||||    
T  7386059 aaaagcaattttgatttaaattatccaaacaacatcaactcataagaatcacttttaaataagtgtatttaaacataaatcaattcacctcaaacccact 7385960  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    ||||| ||||||||||||| | ||||| ||||||||||||||||||| ||  | || | |||| |||||||||||||    
T  7385959 tttaaccaaaatcaattctctaaaacttaattctatcaaaatcaattctcaccgccgctatactaaacacacactaa 7385883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 259 - 423
Target Start/End: Complemental strand, 16158610 - 16158446
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    ||||||||||  |||||||||||||||||||||| |||  ||||||| |||||||| || ||| ||  ||||||||| ||||| |||||||||||||  |    
T  16158610 tttgatcattacacattcaaaatcaattttgattcaaatcatccaaagaacatcaattcctaagaatcacttttaaaaaagtgcatccaaatataaatta 16158511  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||  ||| | |||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  16158510 attcacatcaaactcacttttaatcaaaatcaattctttcaaactcaaatctataaaaatcaatt 16158446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 274 - 453
Target Start/End: Original strand, 10058056 - 10058235
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||| ||| ||||||||||||||||||||| || ||| ||  |||| ||   ||||||||||||| ||||| |||||||| ||  | ||    
T  10058056 ttcaaaatcaattttcattcaaactatccaaacaacatcaattcgtaagaatcacttctagtaaagtgtatccaaacataaatcaattcatttccaactc 10058155  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||||| |||||||||| || |||||||||||| |||||||||||||| ||  |||| |||||| |||||||||||||    
T  10058156 acttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattctccccaccgccatactaaacacacactaa 10058235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 278 - 451
Target Start/End: Complemental strand, 5710511 - 5710339
Alignment:
Q  278 aaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcactt 377  Q
    ||||||||||| ||| ||||||||||||||| ||| |||||||| ||  |||| |||  ||| ||||||||| ||||| |||||||   || | ||||||    
T  5710511 aaatcaatttttattcaaactatccaaacaatatctactcataaaaatcacttgtaat-aagcgtatccaaacataaagcaattcacaccaaactcactt 5710413  T
Q  378 ttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||    
T  5710412 ttaaccaaaatcaattctttcaaactccattctatcaaaatcaattctcgccaccgccataccaaacacacact 5710339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 274 - 454
Target Start/End: Original strand, 32030698 - 32030876
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| ||||||| ||||||||||||||  |||| ||  |||||| || |||| |||| ||| | ||| |||||||  ||  | |     
T  32030698 ttcaaaatcaattttgattcaaactattcaaacaacatcaac--ataagaatcacttttgaataagtatatcaaaacaaaaatcaattcacatctaactt 32030795  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||    
T  32030796 acttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccactataccaaacacacactaag 32030876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 453
Target Start/End: Original strand, 24045803 - 24045991
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||| ||||||||||||||| ||| ||| |||||||||||||||||| ||||| ||  | ||||||   || | ||||||| ||||| |||||||    
T  24045803 tcattgtacgttcaaaatcaattttaattcaaattatccaaacaacatcaacccataaaaatca-ttttaagtgagagcatccaaacataaatcaattca 24045901  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
      ||| | |||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  24045902 catcagactcacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgccataccaaacacatactaa 24045991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 271 - 423
Target Start/End: Complemental strand, 3060355 - 3060205
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||  ||||| ||   ||| |||||||| |||||  ||||||| | | |    
T  3060355 acattcaaaatcaattttgattcaaactatccaaacaacat-aactcataagaatcacttt-aagtgagtatatccaaacataaattaattcatataaaa 3060258  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  3060257 ctcacttttaatcaaaatcaattctctcaaacttaattctatcaaaatcaatt 3060205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 447
Target Start/End: Original strand, 7714912 - 7715095
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||| |||| ||  | ||| ||   ||||| || ||| ||| | |||||||    
T  7714912 tcattatactttcaaaatcaattttaattcaaactatccaaacaacatcaacttataagaatcaatttcaagtgagtgtgtcaaaacatatatcaattca 7715011  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
    | ||  | |||||||||| ||||||||||||| |||||||||||||||||||||||||||||   |||| |||||| |||||||    
T  7715012 tatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatttttaccaccgccatacaaaacaca 7715095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 42146280 - 42146466
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| |||||||| |||||||||||||| ||  ||||||||||| ||||||||| || ||  ||||||||  ||| ||||||||| |||| | ||||||    
T  42146280 tcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatccaaacataatc-aattca 42146378  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    | ||  | |||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||  | ||  |||||||||||||||||    
T  42146379 tatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccgccgtcataccaaacacacact 42146466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 271 - 449
Target Start/End: Complemental strand, 9275617 - 9275439
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||| ||| ||| |||  ||||||||||||||||||||||| ||  | |||||   ||||||||||||| ||||| ||||| |  ||  |    
T  9275617 acattcaaaatcaagtttcattcaaatcatccaaacaacatcaactcataagaatcaattttattaaagtgtatccaaacataaatcaattaacatctaa 9275518  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
     |||||||||| ||||||||||||| | |||||||||| |||||||||||||||||  |||| ||| ||||||||||||    
T  9275517 ctcacttttaaccaaaatcaattctcttaaactcaattttatcaaaatcaattttccccaccgccaaaccaaacacaca 9275439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 264 - 453
Target Start/End: Complemental strand, 40791209 - 40791021
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| |||||||| |||||||||||||| ||  ||||||||||| ||||||||| || ||  ||||||||  ||| ||||||||| |||| | ||||||    
T  40791209 tcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatccaaacataatc-aattca 40791111  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    | ||  | |||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||  | ||   ||||||||||||||||||    
T  40791110 tatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccgccgtgataccaaacacacactaa 40791021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 450
Target Start/End: Complemental strand, 33954034 - 33953856
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||| |||||||||| ||||||||| |||||||||||||||| | ||  |||| ||   ||||||||||||| |||| | | ||    ||| |    
T  33954034 acattcaaaattaattttgattcaaactatccgaacaacatcaactcatcagaatcacttctattaaagtgtatccaaacataatcaatttacgttca-a 33953936  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     ||||||||||  |||||||||||| ||||||||||||||| ||||||||||||||  |||  |||||||||||||||||    
T  33953935 ctcacttttaaataaaatcaattctctcaaactcaattctaccaaaatcaattttcaccactgccataccaaacacacac 33953856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 423
Target Start/End: Original strand, 4292128 - 4292280
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||| |||||||||| ||| ||||||||||| ||||||  | || ||  |||| |||  ||||||||||||| ||||| |||||||  |   |    
T  4292128 acattcaaaattaattttgattcaaattatccaaacaatatcaaccaacaagaatcacttctaattaagtgtatccaaacataaatcaattcacattcaa 4292227  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     | | |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  4292228 cttatttttaatcaaaatcaattctctcaaacttaattctatcaaaatcaatt 4292280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 425
Target Start/End: Complemental strand, 34107068 - 34106926
Alignment:
Q  283 aattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaat 382  Q
    |||||||||| || |||| |||||||||| || |||||| || ||||||||||  | |||||  ||| || || |||||||  ||  | ||||||||||     
T  34107068 aattttgattcaacctattcaaacaacattaattcataagaattacttttaaatgaatgtatttaaacattaatcaattcacatctaactcacttttaac 34106969  T
Q  383 caaaatcaattctgtcaaactcaattctatcaaaatcaatttt 425  Q
    ||||| ||||||| | |||||||||||||||||||||||||||    
T  34106968 caaaaacaattcttttaaactcaattctatcaaaatcaatttt 34106926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 451
Target Start/End: Original strand, 7178760 - 7178936
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaatt-catctcatatt 372  Q
    ||||||| ||||||||||| |||||| ||||||||||| || | |||| ||  | |||||    | |||||||||| ||||| ||||| ||| ||| | |    
T  7178760 ttcaaaagcaattttgattcaaactacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatcaattacat-tca-act 7178857  T
Q  373 cacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||| ||||||| |||||| |||||||||||||||||||| |||||| || ||| | ||  ||||||||||||||    
T  7178858 cacttttagtcaaaattaattctctcaaactcaattctatcaaactcaattatcatcatcgccgaaccaaacacacact 7178936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 420
Target Start/End: Original strand, 27021100 - 27021256
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaac-tatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattc 362  Q
    ||||| ||||||||||||||||||||||| || | |||||||||||||||||||  ||| ||  ||||||||   ||| || ||||| ||||| ||||||    
T  27021100 tcattatacattcaaaatcaattttgattcaatcttatccaaacaacatcaacttctaagaatcacttttaagtgagtata-ccaaacataaatcaattc 27021198  T
Q  363 atctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatca 420  Q
    |  |   | ||| |||||| ||||||||||| | |||||||||||| |||||||||||    
T  27021199 acatttaactcatttttaaccaaaatcaattttctcaaactcaattatatcaaaatca 27021256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 16843517 - 16843563
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactc 317  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||    
T  16843517 acattcaaaatcaattatcatttaaactatccaaacaacatcaactc 16843563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 453
Target Start/End: Complemental strand, 35847922 - 35847841
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||| ||| ||||||||||||  ||||||||||||||||||||||||||| |  ||||| |   ||||||||||||||||    
T  35847922 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctactcaccgcagaaccaaacacacactaa 35847841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 28869613 - 28869547
Alignment:
Q  294 aaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaat 360  Q
    |||||||||||||||||||||||||||| ||  ||||||||  |||||||| |||| ||||| ||||    
T  28869613 aaactatccaaacaacatcaactcataagaatcacttttaagtaagtgtattcaaacataaatcaat 28869547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 3747728 - 3747683
Alignment:
Q  266 attttacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||    
T  3747728 attttacatgtaaaatcaattttgattaaaactatccaaacaacat 3747683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 16843607 - 16843660
Alignment:
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||| ||||||| ||||  |||||||||||| ||||||||||||||    
T  16843607 attcacttttaaccaaaatctattcgttcaaactcaattatatcaaaatcaatt 16843660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 40979996 - 40980037
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  40979996 tacattcaaaatcaattttgatcaaaactatccaaacaacat 40980037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 432
Target Start/End: Complemental strand, 2694792 - 2694732
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacc 432  Q
    |||||||||| ||||||||||||  ||||| ||||||||  ||||||||||| ||||||||    
T  2694792 tcacttttaaccaaaatcaattcaatcaaaatcaattctgacaaaatcaattctcgtcacc 2694732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 452
Target Start/End: Complemental strand, 19204036 - 19203957
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||||||||| ||| |||||||| ||| ||| ||||||||| ||||||||||| |||||||| |   |||||||||||||||    
T  19204036 tcacttttattcataatcaattatgtaaaa-tcaattctaccaaaatcaattctcgtcaccgcataaccaaacacacacta 19203957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 423
Target Start/End: Complemental strand, 23914319 - 23914235
Alignment:
Q  339 gtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||  |||| |||||||| ||  | ||| ||||||  | |||||||||| ||||| |||||||||||||||||||||    
T  23914319 gtgtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaattctatcaaaatcaatt 23914235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 455
Target Start/End: Complemental strand, 3747623 - 3747540
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
    |||||||| |||  |||||||||  ||| | |||||||||||||||||||||||  ||||| |   ||||||||||||||||||    
T  3747623 tcacttttgatccgaatcaattcattcacaatcaattctatcaaaatcaatttttatcaccgcataaccaaacacacactaaga 3747540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 312
Target Start/End: Complemental strand, 33082465 - 33082423
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatc 312  Q
    ||||||||||| ||||||||||  |||||||||||||||||||    
T  33082465 tacattcaaaagcaattttgatcaaaactatccaaacaacatc 33082423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 4295606 - 4295647
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||| ||||| | |||||||||||||||||||||    
T  4295606 tcaaaatcaattatgtcagaatcaattctatcaaaatcaatt 4295647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 7071544 - 7071503
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  7071544 tacattcaaaaacaattttgatcaaaactatccaaacaacat 7071503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 8958020 - 8957979
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  8958020 tacattcaaaagcaattttgataaaaactatccaaacaacat 8957979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 11017953 - 11017912
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  11017953 tacattcaaaaacaattttgatgaaaactatccaaacaacat 11017912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 20069204 - 20069163
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  20069204 tacattcaaaaacaattttgatcaaaactatccaaacaacat 20069163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 27738077 - 27738036
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  27738077 tacattcaaaagcaattttgataaaaactatccaaacaacat 27738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 31906018 - 31906059
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  31906018 tacattcaaaagcaattttgataaaaactatccaaacaacat 31906059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 33386996 - 33386955
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  33386996 tacattcaaaaacaattttgatcaaaactatccaaacaacat 33386955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 41741645 - 41741604
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||| ||||| |||||||||||| ||||||||    
T  41741645 tcaaaatcaattctatcaaaatcaattctatcagaatcaatt 41741604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 413
Target Start/End: Original strand, 4295635 - 4295667
Alignment:
Q  381 atcaaaatcaattctgtcaaactcaattctatc 413  Q
    ||||||||||||||||||||| |||||||||||    
T  4295635 atcaaaatcaattctgtcaaaatcaattctatc 4295667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 25256357 - 25256313
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaa 314  Q
    ||||||||||| ||||||||||  |||||||| ||||||||||||    
T  25256357 tacattcaaaaacaattttgatcaaaactatctaaacaacatcaa 25256313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 25320146 - 25320102
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaa 314  Q
    ||||||||||| ||||||||||  |||||||| ||||||||||||    
T  25320146 tacattcaaaaacaattttgatcaaaactatctaaacaacatcaa 25320102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 2e-69; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 168 - 451
Target Start/End: Original strand, 23358127 - 23358411
Alignment:
Q  168 atcactacacattaaaaaatacagctttggcaaatgtgatataattgnnnnnnnnnnn--gacaaaatataagaaattctatatttaggggcgtttgatc 265  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||             |  |||||| || ||||||||  |||||||| ||||| ||    
T  23358127 atcactacacgttaaaaaatacagctttggtaaatgtgatataattgttttttttttgttggaaaaatacaacaaattctacgtttaggggtgtttggtc 23358226  T
Q  266 attttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatc 365  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||| |||||| | ||||||    
T  23358227 attttacattcaaaatcaattttgattcaaactatccaaacaacattaactcatcacaatcacttttaaacaagtgtatccaaacataaactatttcatc 23358326  T
Q  366 tcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||| | |||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||| || ||||||||||||||||||||    
T  23358327 tcaaactcacttttaatcaaaatcaattctctcaaactcaattctat-taaatcaattctcgccaacaccataccaaacacacact 23358411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 259 - 450
Target Start/End: Complemental strand, 7472819 - 7472629
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||| || || ||    
T  7472819 tttggtcattttacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacat-aatca 7472721  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||  ||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| ||||  ||||||||||||||||    
T  7472720 attcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgtcataccaaacacacac 7472629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 251 - 423
Target Start/End: Complemental strand, 44619215 - 44619043
Alignment:
Q  251 taggggcgtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaat 350  Q
    |||||| ||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||  | |||||||||||||||||||||     
T  44619215 taggggtgtttggtcattttacattcaaaatcgattttaattcaaactatccaaacaacatcaactcataataatcatttttaaacaagtgtatccaaac 44619116  T
Q  351 ataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||| ||||||  |||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  44619115 ataaatcaattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 44619043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 251 - 453
Target Start/End: Original strand, 2215208 - 2215408
Alignment:
Q  251 taggggcgtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaat 350  Q
    |||||| ||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||  | || |||||||||||||||||||||     
T  2215208 taggggtgtttggtcattttacattcaaaatcaattctaatttaaattatccaaacaacatcaactcaaaa--attatttttaaacaagtgtatccaaac 2215305  T
Q  351 ataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||| ||||||| |||| | |||||||||| ||||||||||||| |||| |||||||||||||||||||||| ||   ||| | |||||||||||||||    
T  2215306 ataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaattctatcaaaatcaattctcacaaccgctataccaaacacacac 2215405  T
Q  451 taa 453  Q
    |||    
T  2215406 taa 2215408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 258 - 452
Target Start/End: Complemental strand, 9988648 - 9988454
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| |||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||  ||  ||||||||| ||||||||||||| ||||| |    
T  9988648 gtttggtcattacacattcaaaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaacataaatc 9988549  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||||||  ||  | ||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||    
T  9988548 aattcacatccaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgccaaaccaaacacacacta 9988454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 460
Target Start/End: Original strand, 36548167 - 36548362
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||| ||||||||||||||| ||||||| |||||||||||||||||| ||||| ||  | ||||||   || ||||||||| ||||| |||||||    
T  36548167 tcattgtacgttcaaaatcaattttaatttaaattatccaaacaacatcaacccataaaaatca-ttttaagtgagagtatccaaacataaatcaattca 36548265  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaaattt 460  Q
      ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||||||||||||| || |||||    
T  36548266 catcagactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaaacacacacttagtaattt 36548362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 271 - 452
Target Start/End: Complemental strand, 31562818 - 31562640
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||| ||||||||||| || ||||||||| ||  |||||||||| |||||  ||||| |||| | |||||| |||| |    
T  31562818 acattcaaaatcaattttgattcaaattatccaaacaatataaactcataagaatcacttttaaacgagtgt--ccaaacataatc-aattcacctcaaa 31562722  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  31562721 ttcacttttaaccaaaatcaattctctcaaactcaattttatcaaaatcaattctcgccaccaccataccaaacacgcacta 31562640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 274 - 455
Target Start/End: Complemental strand, 39141600 - 39141420
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||  | |||||||  |||||||||||| || || |||||||| ||  | ||    
T  39141600 ttcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaatgagtgtatccaaacat-aatcaattcatatccaactc 39141502  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||| ||| |||| ||  ||||||||||||| ||||    
T  39141501 acttttaaccaaaatcaattctttcaaactcaattatatcaaaatcaattctcgccaccgcccaaccaaacacacacgaaga 39141420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 259 - 450
Target Start/End: Original strand, 2213468 - 2213659
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||| ||  ||||||||   |||||||||||| ||||| ||    
T  2213468 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 2213567  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||  |   | |||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||  |||| | |||||||||||||||    
T  2213568 attcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacacacac 2213659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 450
Target Start/End: Complemental strand, 28127439 - 28127242
Alignment:
Q  253 ggggcgtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatat 352  Q
    |||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||| ||  ||||||||   |||||||||||| ||    
T  28127439 ggggtgtttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacat 28127340  T
Q  353 aaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||| |||||||  |   | |||||||| | ||||||||||||| ||||||| ||||||||||||||||||| ||  |||| | |||||||||||||||    
T  28127339 aaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactaaattctatcaaaatcaattctccccaccgctataccaaacacacac 28127242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 278 - 451
Target Start/End: Complemental strand, 1945166 - 1944993
Alignment:
Q  278 aaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcactt 377  Q
    ||||||||||||||| |||||||||||||||||||||| || |  ||  ||||||||  ||||||||||||| ||||| |||||||  |   | ||||||    
T  1945166 aaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcactt 1945067  T
Q  378 ttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||  | || ||||||||||||||||||    
T  1945066 ttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccataccaaacacacact 1944993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 264 - 453
Target Start/End: Original strand, 7296122 - 7296311
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| || |||||||||||||||||| |||||||||||||| |||||||| |||| | ||  ||||||| |  |||||||||||| ||||| |||||||    
T  7296122 tcattatatattcaaaatcaattttgacttaaactatccaaataacatcaagtcatgataatcacttttatatgagtgtatccaaacataaatcaattca 7296221  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
      ||| | ||| |||||| ||||||||||||| |||||||||||| ||||||| |||||| ||| | ||||||  |||||||||||||||    
T  7296222 catcaaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaagtcaattatcggcgccaccaatccaaacacacactaa 7296311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 272 - 449
Target Start/End: Original strand, 32501961 - 32502137
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    |||| |||||||||||||||| |||||| |||||||| |||||||| ||| || |||||||||   | |||||||||| |||| | |||||| || | |     
T  32501961 catttaaaatcaattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattgaatgtatccaaacataatc-aattcacctaaaac 32502059  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||   ||| ||||||||||||||||    
T  32502060 tcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcacgaccgccataccaaacacaca 32502137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 271 - 452
Target Start/End: Original strand, 36312251 - 36312431
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |  ||  ||||||||  ||||||||||||| || || |||||||  |   |    
T  36312251 acattcaaaatcaattttgattcaaactatccaaacaacatcaactcacatgaatcacttttaataaagtgtatccaaacat-aatcaattcacattcaa 36312349  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
     |||||||||| ||||||||||||| ||||| | ||||||||||||||||||| ||  | || |||||||||||||||||||    
T  36312350 ctcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattctccccgccgccataccaaacacacacta 36312431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 271 - 451
Target Start/End: Complemental strand, 5916375 - 5916196
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |  ||  ||||||||  ||||||||||||| || || |||||||  |   |    
T  5916375 acattcaaaatcaattttgattcaaactatccaaacaacatcaactcacatgaatcacttttaataaagtgtatccaaacat-aatcaattcacattcaa 5916277  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||| ||||||||||||| ||||| | ||||||||||||||||||| ||  | || ||||||||||||||||||    
T  5916276 ctcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattctccccgccgccataccaaacacacact 5916196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 14821137 - 14821312
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||  |||| ||   ||||||||||||| |||| | ||||||  | | |    
T  14821137 acattcaaaatcaattttgattcaaaatatccaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaacataatc-aattcacattaaa 14821235  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
     ||||||||||  |||||||||||  |||||||||||||||||||||| |||| |||||||| | ||||||||||||    
T  14821236 ctcacttttaactaaaatcaattcactcaaactcaattctatcaaaattaattatcgtcaccgctataccaaacaca 14821312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 8170280 - 8170466
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaatt-c 362  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||  || | |    | ||||||||||| |||| | | || |    
T  8170280 tcattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacatctgttaacgtgtatccaaacataatcaatttac 8170379  T
Q  363 atctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    || ||| | |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| |||| || |||||||||||||||    
T  8170380 at-tca-actcacttttaatcaaaatcaattctctcaaactcaattctatcaaaattaattctcgccaccgccctaccaaacacacact 8170466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 258 - 450
Target Start/End: Complemental strand, 26208076 - 26207884
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| ||||| |||||| |||||||||||||||| | |  ||||||||||||||||||  ||| ||  | ||||||  ||||||||| ||| ||||| |    
T  26208076 gtttggtcattgtacatttaaaatcaattttgattcatataatccaaacaacatcaacttgtaagaatcaattttaattaagtgtatcaaaacataaatc 26207977  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||||  ||  | | |||||||| ||||| ||||||| ||||| | ||||||||||||||||||||||||||||  ||||||||||||||||    
T  26207976 aattcacatccaactgacttttaaccaaaaccaattctctcaaaattaattctatcaaaatcaattttcgtcaccgtcataccaaacacacac 26207884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 423
Target Start/End: Original strand, 2213658 - 2213773
Alignment:
Q  308 acatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaat 407  Q
    |||||||||||||| ||  ||||||||| ||||||||||||| | ||| |||||||  ||| | |||||||||| ||||||||||||| |||||||||||    
T  2213658 acatcaactcataagaatcacttttaaataagtgtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaat 2213757  T
Q  408 tctatcaaaatcaatt 423  Q
    ||||||||||||||||    
T  2213758 tctatcaaaatcaatt 2213773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 270 - 445
Target Start/End: Complemental strand, 42516110 - 42515936
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcat 369  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||  || ||  | |||| ||  ||| ||| |||| |||| | ||||||  |||     
T  42516110 tacattcaaaatcaattttaattcaaactatccaaacaacatcaactcgaaagaatcattttttaatgagtatattcaaacataatc-aattcacatcaa 42516012  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaaca 445  Q
    | ||||||||||  |||||||||||| |||||||||||| |||||||||||||||||  |||| ||||||||||||    
T  42516011 actcacttttaactaaaatcaattctctcaaactcaattatatcaaaatcaattttctccaccgccataccaaaca 42515936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 264 - 453
Target Start/End: Complemental strand, 7295487 - 7295300
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| || |||||||||||| ||||| |||||||||||||||||||||||||||| | ||  ||||||  | | ||||||||||| ||||| ||||| |    
T  7295487 tcattatatattcaaaatcaagtttgacttaaactatccaaacaacatcaactcatgataatcactttt--atatgtgtatccaaacataaatcaattta 7295390  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
      ||| | ||| |||||| || |||||||||| |||||||||||||||||||||| |||| ||| | ||  ||  |||||||||||||||    
T  7295389 cgtcaaactcatttttaaccagaatcaattctctcaaactcaattctatcaaaattaattatcgacgccgtcaatccaaacacacactaa 7295300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 453
Target Start/End: Complemental strand, 42089639 - 42089480
Alignment:
Q  298 tatccaaacaacatcaactcataacaactacttttaaacaagtgtatc----caaatataaaccaattcatctcatattcacttttaatcaaaatcaatt 393  Q
    |||||||||||||||||||||||| ||  ||||||||| |||||||||    |||| ||||| |||||||  |   | ||||||||||||||||||||||    
T  42089639 tatccaaacaacatcaactcataagaatcacttttaaataagtgtatctatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaatt 42089540  T
Q  394 ctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    || |  |||| |||||||||||||||||||||| ||||| ||| | ||||||||||||||    
T  42089539 ctcttgaacttaattctatcaaaatcaattttcatcaccgccaaatcaaacacacactaa 42089480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 423
Target Start/End: Original strand, 28261261 - 28261420
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| |||||| ||||| |||||||||| ||||||| |||||||||||||||||||| ||  |||| ||    || ||||||||||||||| |||||||    
T  28261261 tcattatacatttaaaattaattttgattcaaactattcaaacaacatcaactcataagaatcacttctatgtgagagtatccaaatataaatcaattca 28261360  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
      ||  | |||||||||| ||||||||||||| |||||||||||| ||| ||||| ||||    
T  28261361 catccaactcacttttaagcaaaatcaattctctcaaactcaattgtattaaaattaatt 28261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 307 - 450
Target Start/End: Original strand, 31224690 - 31224833
Alignment:
Q  307 aacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaa 406  Q
    ||||||||||||||| ||  |||||||   || | |||||||| ||||| |||||||  ||  | ||||||||||  |||||||||||| ||||||||||    
T  31224690 aacatcaactcataagaatcacttttagtaaaatatatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaa 31224789  T
Q  407 ttctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||    
T  31224790 ttctatcaaaatcaattttcgtcaccgccaaaccaaatacacac 31224833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 448
Target Start/End: Complemental strand, 34433339 - 34433263
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |   |||||||||||    
T  34433339 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattctcttcaccgctgaaccaaacacac 34433263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 381
Target Start/End: Complemental strand, 25940387 - 25940265
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| || |||||||||||||||||||| ||||| |||||||||||||| ||||||| ||  |||| || || ||||||| |||||||||| ||    
T  25940387 tttggtcattatatattcaaaatcaattttgattcaaactgtccaaacaacatcatctcataataatcacttctatacgagtgtattcaaatataaatca 25940288  T
Q  359 attcatctcatattcacttttaa 381  Q
    |||||  ||| | ||||||||||    
T  25940287 attcacatcaaactcacttttaa 25940265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 423
Target Start/End: Complemental strand, 25748027 - 25747864
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||||| ||| ||| ||||||| ||||||||||| |||||| ||||||||||| || | |||| ||  | |||||    | |||||||||| ||||| ||    
T  25748027 tttgataattatactttcaaaagcaattttgattcaaactacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatca 25747928  T
Q  359 att-catctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||| ||| ||| | |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  25747927 attacat-tca-actcacttttaatcaaaatcaattctctcaaactcaattctatcaaactcaatt 25747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 271 - 454
Target Start/End: Original strand, 28641616 - 28641799
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaa-caagtgtatccaaatataaaccaattcatctcat 369  Q
    ||||| |||||||||||| ||| ||  ||||||||||||||||||| |||| ||  |||||||||  |||| || ||||||||||| |||||||  ||      
T  28641616 acatttaaaatcaattttaattcaacatatccaaacaacatcaacttataataatcacttttaaatgaagt-tacccaaatataaatcaattcacatcca 28641714  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    | |||| ||||| ||||||||||||| ||| | ||||||| || ||||||||||||   || | ||| |||||||||||||||||    
T  28641715 actcacatttaaccaaaatcaattctctcagaatcaattcaattaaaatcaattttatccatcgccaaaccaaacacacactaag 28641799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 425
Target Start/End: Original strand, 8041242 - 8041406
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||||| ||| ||| ||||||| ||||||||||| |||||| ||||||||||| || | |||| ||  | ||||||  || || ||||||| ||||| ||    
T  8041242 tttgataattatactttcaaaaacaattttgattcaaacta-ccaaacaacataaattgataaaaataaattttaagtaattgcatccaaacataaatca 8041340  T
Q  359 att-catctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatttt 425  Q
    ||| ||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||  |||||||    
T  8041341 attacat-tca-attcacttttattcaaaatcaattctctcaaactcaattctatcaaacacaatttt 8041406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 453
Target Start/End: Original strand, 3853874 - 3854056
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||| ||||||||||| ||||||||||||||||||  | | |||| ||  | ||||| |  | |||||||||| ||||| ||||| |  |   |    
T  3853874 acattcaaaagcaattttgattcaaactatccaaacaacatagattgataagaatcaattttacatgaatgtatccaaacataaatcaatttacattcaa 3853973  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
     |||||||||||||||||||||||| ||||| ||||||| |||||| |||||| |||  ||| |   ||||||||||||||||    
T  3853974 ctcacttttaatcaaaatcaattctatcaaaatcaattccatcaaactcaattctcgctaccgcacaaccaaacacacactaa 3854056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 423
Target Start/End: Original strand, 16467066 - 16467212
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    ||||| ||||||||| |||||||||||||| |||||||| ||||| ||  ||||||| |  |   |||||||| ||||| ||||| |  ||  | |||||    
T  16467066 aaaattaattttgatctaaactatccaaactacatcaacccataagaatcacttttacattatcatatccaaacataaatcaatttacatctaactcact 16467165  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||| ||||||||||| || |||| |||||||||||||||||||||    
T  16467166 tttaaccaaaatcaattatgccaaaatcaattctatcaaaatcaatt 16467212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 423
Target Start/End: Complemental strand, 45714735 - 45714650
Alignment:
Q  338 agtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||| ||||| |||||||  ||  | ||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  45714735 agtgtatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaattatatcaaaatcaatt 45714650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 451
Target Start/End: Original strand, 12110949 - 12111027
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||||| ||||||||||| || |||| |||||||||||||||||||||||||||||| |   ||||||||||||||    
T  12110949 tcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaattttcgtcaccgcacaaccaaacacacact 12111027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 272 - 423
Target Start/End: Original strand, 18511077 - 18511228
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | |||| ||  | ||||| |    |||||||||| ||||| ||||| |  |   |     
T  18511077 cattcaaaatcaattttgatttaaattatccaaacaacatcactttataagaatcatttttacattgatgtatccaaacataaatcaattaacatttaaa 18511176  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||| ||||||||||| | ||||| |||||| ||||||||||||||    
T  18511177 tcacttttaaccaaaatcaattatatcaaaatcaattttatcaaaatcaatt 18511228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 408
Target Start/End: Original strand, 27911386 - 27911517
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||| ||||||| |||||||| ||||||||||   || ||  |||||||||  ||| |||||||| ||||| |||||||  ||| | |||||    
T  27911386 aaaatcaattttaatttaaagtatccaaataacatcaacttgaaataatcacttttaaatgagtatatccaaacataaatcaattcacatcaaactcact 27911485  T
Q  377 tttaatcaaaatcaattctgtcaaactcaatt 408  Q
    ||||| |||| |||||||| ||||| ||||||    
T  27911486 tttaaccaaactcaattctatcaaaatcaatt 27911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 276 - 395
Target Start/End: Complemental strand, 43436410 - 43436291
Alignment:
Q  276 caaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcac 375  Q
    ||||||||||||| ||  || |||||||||||||||||| |||||  || ||||||||||  |||| ||| ||| ||||| ||||| |  ||  ||||||    
T  43436410 caaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatcaaaacataaatcaatttacatctaattcac 43436311  T
Q  376 ttttaatcaaaatcaattct 395  Q
    ||||||||||||||||||||    
T  43436310 ttttaatcaaaatcaattct 43436291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 30007586 - 30007509
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||||||||| ||  |||  |||||||| |||||||    
T  30007586 tcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctccccacagccataccatacacaca 30007509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 423
Target Start/End: Complemental strand, 41580776 - 41580692
Alignment:
Q  339 gtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||||| |||||  |||| |  ||| | |||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  41580776 gtgtatccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcgatcaaaatcaatt 41580692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 38600513 - 38600425
Alignment:
Q  335 acaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||| |||| ||||| ||||| |  ||| | |||||||||| ||||||||||||| ||||||| ||||| |||||||| ||||    
T  38600513 acaagtgtattcaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaacttaattcgatcaaaattaatt 38600425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 23267397 - 23267346
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||| ||| ||||||||||||  |||||||||||||||||||||||||||    
T  23267397 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 23267346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 457
Target Start/End: Original strand, 27911492 - 27911551
Alignment:
Q  398 caaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaaa 457  Q
    |||||||||||||||||||||||||| ||| | || ||  ||||||||||||||||||||    
T  27911492 caaactcaattctatcaaaatcaattatcgccgccgccgaaccaaacacacactaagaaa 27911551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 450
Target Start/End: Complemental strand, 3602587 - 3602415
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||| ||| |||||||||||||||||| || | |||| ||  |||||||    | | |||||||| ||||  ||||| |  ||| | |||||    
T  3602587 aaaatcaattttaattcaaactatccaaacaacatgaattaataaaaatcacttttattttaatatatccaaacataattcaattaagttca-actcact 3602489  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||  ||||||||||||| ||||| |||||||  | ||||||||||||| ||||| |   |||||||||||||    
T  3602488 tttagacaaaatcaattctatcaaaatcaattcagtaaaaatcaattttcatcaccgcagaaccaaacacacac 3602415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 34997271 - 34997215
Alignment:
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttc 426  Q
    ||||| ||||||  |||||||||| ||||||||| |||| |||||||||||||||||    
T  34997271 attcatttttaacaaaaatcaattttgtcaaactaaattttatcaaaatcaattttc 34997215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 2234900 - 2234950
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataa 321  Q
    |||||| ||||| |||||||||| |||||||||||||||||| |||||||||    
T  2234900 tacatttaaaattaattttgattcaaactatccaaacaacat-aactcataa 2234950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 15283389 - 15283350
Alignment:
Q  273 attcaaaatcaattttgatttaaactatccaaacaacatc 312  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  15283389 attcaaaatcaattttaatctaaactatccaaacaacatc 15283350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 451
Target Start/End: Complemental strand, 26806288 - 26806210
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||||||||||||||||||||| ||| | ||||| | ||||||||||| | |||||| |   ||||||||||||||    
T  26806288 tcacttttaatcaaaatcaattctgt-aaaattaattcaaccaaaatcaattattgtcaccgcgtaaccaaacacacact 26806210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 37640275 - 37640236
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaac 309  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  37640275 tacattcaaaatcaattttgataaaaactatccaaacaac 37640236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 7474113 - 7474154
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  7474113 tacattcaaaagcaattttgataaaaactatccaaacaacat 7474154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 17481374 - 17481415
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  17481374 tacattcaaaagcaattttgataaaaactatccaaacaacat 17481415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 32496624 - 32496583
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  32496624 tcaaaatcaattctgtcataatcaattctatcagaatcaatt 32496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 43341788 - 43341747
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  43341788 tacattcaaaagcaattttgataaaaactatccaaacaacat 43341747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 452
Target Start/End: Complemental strand, 43436305 - 43436264
Alignment:
Q  411 atcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||||||||||||| ||| |||| |||||||||||||||||||    
T  43436305 atcaaaatcaattctcgccaccgccataccaaacacacacta 43436264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 43695614 - 43695655
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  43695614 tacattcaaaaacaattttgatcgaaactatccaaacaacat 43695655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 9e-62; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 13739159 - 13739350
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| || || ||    
T  13739159 tttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatca 13739257  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||| |||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  13739258 attcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 13739350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 13744659 - 13744850
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| || || ||    
T  13744659 tttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatca 13744757  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||| |||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  13744758 attcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 13744850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 259 - 453
Target Start/End: Complemental strand, 29409399 - 29409205
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||  | ||||||| || |||||||||| ||||| ||    
T  29409399 tttggtcattatacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaaaaactgtatccaaacataaatca 29409300  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||  ||| | |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||  ||||||||| |||||||||    
T  29409299 attcacatcaaactcacttttaatcaaaatcaattctttcaaactcaattctattaaaatcaattttcgccaccgtcataccaaaaacacactaa 29409205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 271 - 452
Target Start/End: Complemental strand, 33899141 - 33898960
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||||||||||||||||||| |||||||||  || ||||||||| ||  ||||||| |  |||||||||||| ||||| |||||||| ||| |    
T  33899141 acattcaaaatcaattttgatttaaaccatccaaacattattaactcataagaatcacttttacattagtgtatccaaacataaatcaattcatatcaaa 33899042  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||| | |||||||||||||||||    
T  33899041 ctcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 33898960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 451
Target Start/End: Complemental strand, 6208198 - 6208019
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||||||||| ||  |||||||   ||||||||||||| |||| | ||||||  |   |    
T  6208198 acattcaaaattaattttgattcaaactatctaaacaacatcaactcataagaatcacttttagtaaagtgtatccaaacataatc-aattcacattcaa 6208100  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||| |||| | ||||||||||||||||    
T  6208099 ctcacttttaatcaaaatcaattcactcaaaatcaattctatcaaaatcaattatcgccaccgctataccaaacacacact 6208019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 448
Target Start/End: Complemental strand, 17830134 - 17829957
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || || ||| |||| |||  || |||| | ||| ||||| |||||||  |   |    
T  17830134 acattcaaaatcaattttgattcaaactatccaaacaacatcaacccacaagaacgacttctaataaactgtaactaaacataaatcaattcacattcaa 17830035  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
     |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||  | |||||||||||||    
T  17830034 ctcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccacagctataccaaacacac 17829957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 274 - 449
Target Start/End: Original strand, 31132432 - 31132606
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| ||  ||||||||| ||||||||||||| || ||| |||| |  ||  | ||    
T  31132432 ttcaaaatcaattttgattcaaactatccaaacaacatcaacccataagaatcacttttaaataagtgtatccaaaaat-aacgaattaacatccaactc 31132530  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    | |||||  |||||| |||| | ||||||||||||||||||||||||||| |||||||| ||| || | |||||||    
T  31132531 atttttagccaaaataaattatctcaaactcaattctatcaaaatcaattatcgtcaccgccaaactatacacaca 31132606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 277 - 450
Target Start/End: Original strand, 10826062 - 10826235
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||| ||  ||||||||| |||| |||||||| | ||| |||||||  |   | |||||    
T  10826062 aaaattaattttgattcaaactatccaaacaaaatcaactcataagaatcacttttaaataagtatatccaaacaaaaatcaattcaaattcaactcact 10826161  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| |||| ||  | || ||| |||||||||||||    
T  10826162 tttaaccaaaatcaattctctcaaactcaattttatcaaaattaattctcaccgccgccaaaccaaacacacac 10826235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 266 - 423
Target Start/End: Original strand, 699518 - 699673
Alignment:
Q  266 attttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatc 365  Q
    |||||| |||||||||| ||||||||| ||||||||||| |||||| |||| |||| || ||||||||   ||||| ||||||| ||||| |||||| |     
T  699518 attttatattcaaaatcgattttgattcaaactatccaa-caacattaacttataagaattacttttagtaaagtgcatccaaacataaatcaattctta 699616  T
Q  366 tcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||  | ||||||| | | |||||||||||| |||||||||||||||||||||||||||    
T  699617 tccaactcactttaact-aaaatcaattctttcaaactcaattctatcaaaatcaatt 699673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 258 - 410
Target Start/End: Complemental strand, 16442499 - 16442347
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| |||||  |||||||||||||||||| ||| ||| ||||||||||| |||||||||||  ||  ||||||||| ||||||||||||| ||||| |    
T  16442499 gtttggtcattacacattcaaaatcaattttcattcaaattatccaaacaatatcaactcatatgaatcacttttaaataagtgtatccaaacataaatc 16442400  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattct 410  Q
    ||||||  |   | |||||| |||  |||||||||||| ||||| ||||||||    
T  16442399 aattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaattct 16442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 395
Target Start/End: Original strand, 16548104 - 16548228
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || |  ||  ||||||||  ||||||||||||| ||||| |||||||  |   |    
T  16548104 acattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaa 16548203  T
Q  371 ttcacttttaatcaaaatcaattct 395  Q
     |||||||||| |||||||||||||    
T  16548204 ctcacttttaaccaaaatcaattct 16548228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 372 - 455
Target Start/End: Complemental strand, 5584084 - 5584001
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| |   ||| ||||||||||||||    
T  5584084 tcacttttagtcaaaatcaattctgtcaaaatcaattctatcaaaatcaattctcgtcaccgcagaacctaacacacactaaga 5584001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 451
Target Start/End: Complemental strand, 1312474 - 1312395
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||||| ||||||||||| | |||||||| |||||||||||||||||||||  |||| |   ||||||||||||||    
T  1312474 tcacttttaaccaaaatcaattttatcaaactcgattctatcaaaatcaattttctccaccgctgaaccaaacacacact 1312395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 21254914 - 21254863
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  21254914 tcacttttaatcaaattcaattctctcaaactcaattctatcaaactcaatt 21254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 455
Target Start/End: Complemental strand, 26274662 - 26274579
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
    ||||||||| ||| |||||||| ||||||| ||||||||||||||||||||| ||||  || |   ||||||||||||||||||    
T  26274662 tcacttttagtcagaatcaattatgtcaaaatcaattctatcaaaatcaattctcgttgccgcagaaccaaacacacactaaga 26274579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 450
Target Start/End: Complemental strand, 29399817 - 29399750
Alignment:
Q  383 caaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||  |||| ||| |||||||| ||||    
T  29399817 caaaatcaattctatcaaactcaattctatcaaaatcaattctctccaccgccaaaccaaacatacac 29399750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 32599497 - 32599446
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  32599497 tcacttttaatcaaaatcaattctcttaaattcaattctatcaaaatcaatt 32599446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 448
Target Start/End: Complemental strand, 16122036 - 16121960
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
    |||||||||| ||||||||||||| ||||| |||||| |||||||||||||| |   |||| |||||||||| ||||    
T  16122036 tcacttttaaccaaaatcaattctatcaaaatcaattttatcaaaatcaattataaccaccgccataccaaagacac 16121960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 451
Target Start/End: Complemental strand, 3605786 - 3605708
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||||||||||||||||||||  |||| |||||| ||||||||||||||||   ||||||   ||||||||||||||    
T  3605786 tcacttttaatcaaaatcaattct-acaaaatcaattatatcaaaatcaattttgtccaccacacaaccaaacacacact 3605708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 15151540 - 15151489
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||| ||| ||||||||||||  |||||||||||||||||||||||||||    
T  15151540 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 15151489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 21455948 - 21456006
Alignment:
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacc 432  Q
    ||||||||  ||||||||||||  ||||||||||| ||||||||||||||  |||||||    
T  21455948 acttttaactaaaatcaattcttacaaactcaattatatcaaaatcaattcccgtcacc 21456006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 10683843 - 10683884
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||| | |||||| ||||||||||||||    
T  10683843 tcaaaatcaattctgtcagaatcaattatatcaaaatcaatt 10683884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 31745527 - 31745486
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  31745527 tacattcaaaagcaattttgatcaaaactatccaaacaacat 31745486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 2935735 - 2935695
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||||||| |||||||||| |||| ||||||||||||||    
T  2935735 acattcaaaaacaattttgatctaaattatccaaacaacat 2935695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 259 - 449
Target Start/End: Complemental strand, 43781666 - 43781477
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| || || ||    
T  43781666 tttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatca 43781568  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    ||||| |||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  43781567 attcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacaca 43781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 264 - 448
Target Start/End: Original strand, 30842075 - 30842258
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||||||||||||||||||||||||||| ||||||||||||  | |||||||||||| ||  ||||| ||||||||||||||||| |||| | ||||||    
T  30842075 tcattttacattcaaaatcaattttgattcaaactatccaaatgaaatcaactcataagaatcactttcaaacaagtgtatccaaacataatc-aattca 30842173  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
     |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  30842174 cctcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgccataccaaacacac 30842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 258 - 453
Target Start/End: Original strand, 51922877 - 51923072
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||   ||||||||||||| ||||| |    
T  51922877 gtttggtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaattacttttagtaaagtgtatccaaacataaatc 51922976  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    ||||||  |   | |||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||    
T  51922977 aattcagattcaactcacttttaaccaaaatcaattctctcaaactcaattctaacaaaatcaattctcgtcgccgccataccaaacacacactaa 51923072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 264 - 444
Target Start/End: Complemental strand, 48407840 - 48407661
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||||||||||||||||||||||||||| ||||||||||||  | |||||||||||| ||  ||||| ||||||||||||||||| || || |||||||    
T  48407840 tcattttacattcaaaatcaattttgattcaaactatccaaatgaaatcaactcataagaatcactttcaaacaagtgtatccaaacat-aatcaattca 48407742  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaac 444  Q
     |||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| | |||| ||||||    
T  48407741 cctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcagcgccattccaaac 48407661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 271 - 449
Target Start/End: Original strand, 39636735 - 39636913
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||| ||| ||  ||||||||  ||||||||||||| ||||| |||||||  ||  |    
T  39636735 acatttaaaatcaattttgattcatactatccaaacaacatcaactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaa 39636834  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||  |||||||||||||||    
T  39636835 ctcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgtcataccaaacacaca 39636913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 277 - 455
Target Start/End: Complemental strand, 43772253 - 43772075
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||||||| | | |||||||||||||||||||| ||| ||  |||| |||| ||||||||||||| ||||| | |||||  ||  | |||||    
T  43772253 aaaatcaattttgattcatattatccaaacaacatcaactcgtaagaatcacttctaaaaaagtgtatccaaacataaatcgattcacatccaactcact 43772154  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  43772153 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatcgtcaccaccaaaccaaacacacactaaga 43772075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 258 - 447
Target Start/End: Complemental strand, 13183199 - 13183010
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||  | ||||||| ||||||||||||| ||||| |    
T  13183199 gtttggtcattttacattcaaaatcaattttgatttaaattatccaaaaaacatcaacttataaaaatcatttttaaataagtgtatccaaacataaatc 13183100  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
    |||||| || | | |  ||||||| ||||||||||| | ||| |||||||| |||||||||||||| ||||||||  |||||||||||||    
T  13183099 aattcaccttaaacttgcttttaaccaaaatcaattatctcagactcaattttatcaaaatcaattatcgtcaccgtcataccaaacaca 13183010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 264 - 452
Target Start/End: Complemental strand, 9889477 - 9889290
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||  ||||| ||   |||||||||||| ||| || ||||||    
T  9889477 tcattatacattcaaaatcaattttaattcaaactatccaaacaacatctactcataagaatcactttcaagtgagtgtatccaaacatatac-aattca 9889379  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    | ||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||| |||||||||||||| ||||    
T  9889378 tatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacacatacta 9889290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 258 - 450
Target Start/End: Complemental strand, 26651997 - 26651805
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||| || ||||||||   ||||||||| ||| ||||| |    
T  26651997 gtttggtcattatacattcaaaatcaattttgattcaaactatccaaataacatcgactcataagaattacttttagtaaagtgtatctaaacataaatc 26651898  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||||  |   | |||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||| | || |||||||||||||||||    
T  26651897 aattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattctcgccgccgccataccaaacacacac 26651805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 272 - 453
Target Start/End: Original strand, 28986972 - 28987150
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| ||  ||||  ||   ||||||| |||| |||| | |||||| |||| |     
T  28986972 catttaaaatcaattttgattcaaactatccaaacaacatcaactcataaaaatcactt--aagtgagtgtattcaaacataatc-aattcacctcaaac 28987068  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  28987069 tcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaaacacacactaa 28987150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 259 - 455
Target Start/End: Complemental strand, 29149455 - 29149259
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||| ||  ||||||||   |||||||||||| ||||| ||    
T  29149455 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 29149356  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
    |||||  |   | |||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||  |||| | |||||||| |||||||||||    
T  29149355 attcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaatacacactaaga 29149259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 271 - 451
Target Start/End: Complemental strand, 46830205 - 46830025
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| ||||||||||||||| || | |||||||||||||||||||||||| ||  | ||||||  ||||||||||||| ||||| |||||||  ||  |    
T  46830205 acatttaaaatcaattttgatgtagaatatccaaacaacatcaactcataagaatcaattttaagaaagtgtatccaaacataaatcaattcacatccaa 46830106  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||| ||||||||||||  | ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  46830105 ctcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 46830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 259 - 453
Target Start/End: Original strand, 54150464 - 54150658
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||||| ||| |||||  |||| ||||||||||||||  ||||||||||||| ||||| |||| ||  | ||||||  ||||||||||||| | ||| ||    
T  54150464 tttgataattatacatctaaaagcaattttgatttaatgtatccaaacaacaccaacttataagaatcatttttaacgaagtgtatccaaacaaaaatca 54150563  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||  ||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||    
T  54150564 attcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattcttgccaccgccataccaaacacacactaa 54150658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 278 - 450
Target Start/End: Complemental strand, 6138749 - 6138577
Alignment:
Q  278 aaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcactt 377  Q
    ||||||||||| ||| |||||||||||||||||||||||||||  ||  | ||||||| ||||||||||||| ||||| |||||||  ||  | ||||||    
T  6138749 aaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcatttttaaataagtgtatccaaacataaatcaattcacatccaactcactt 6138650  T
Q  378 ttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||    
T  6138649 ttaaccaaaatcaattatttcaaactcaattctatcaaaatcaattctccccaccgccaaaccaaacacacac 6138577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 263 - 447
Target Start/End: Original strand, 9893653 - 9893837
Alignment:
Q  263 atcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattc 362  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||| ||    ||||||||||| ||| | ||||||    
T  9893653 atcattatacattcaaaatcaattttaatttaaactatccaaacaacatcaactcataagaatcactttcaagtgggtgtatccaaacatatatcaattc 9893752  T
Q  363 atctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
    || ||  | |||||||| |  |||||||||||| ||||| ||||||||||||||||||||| ||  |||| ||||||||||||||    
T  9893753 atatctaactcacttttgacaaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgccataccaaacaca 9893837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 259 - 451
Target Start/End: Complemental strand, 19592379 - 19592187
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| ||||||||||||||||||| ||| |||||||||||||||| |||| || ||| ||  |||||||   ||||||||||||| ||||| ||    
T  19592379 tttggtcattgtacattcaaaatcaattttcattcaaactatccaaacaacgtcaattcgtaagaatcacttttagtaaagtgtatccaaacataaatca 19592280  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||  ||  | |||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||  |||| ||||| ||||||||||||    
T  19592279 attcacttccaactcacttttaaccaaaatcaattctctaaaactcaattctatcaaaatcaattctccccaccgccatatcaaacacacact 19592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 271 - 450
Target Start/End: Original strand, 14072453 - 14072631
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | ||  |||| ||   ||||||||||||| |||| | |||| | ||   |    
T  14072453 acattcaaaatcaattttgattcaaactatccaaacaacatcaactcattagaatcacttctattaaagtgtatccaaacataatc-aatttaccttcaa 14072551  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||| |||||||||||||||||    
T  14072552 ctcacttttaaacaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacacacac 14072631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 271 - 453
Target Start/End: Original strand, 16566255 - 16566437
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || |  ||  ||||||||  ||||||||||||| ||||| |||||||  |   |    
T  16566255 acattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaa 16566354  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
     |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||    |  ||||||||||||||||||||    
T  16566355 ctcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccctgctgccataccaaacacacactaa 16566437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 264 - 453
Target Start/End: Original strand, 6505144 - 6505333
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||| |||| | ||  ||||||| |  |||||||| ||| ||||| |||||||    
T  6505144 tcattatatattcaaaatcaattttgacttaaactatccaaacaacatcaagtcatgataatcacttttatatgagtgtatctaaacataaatcaattca 6505243  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
      ||| | ||| |||||| ||||||||||||| |||||||||||||||||||| |||||| ||| | || |||  |||||||||||||||    
T  6505244 catcaaactcatttttaaccaaaatcaattctctcaaactcaattctatcaaagtcaattatcgacgccgccaatccaaacacacactaa 6505333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 15603298 - 15603490
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||  | |||||| ||||| |||| ||| | ||| ||    
T  15603298 tttgatcattgtgcattcaaaatcaattttgacttaaattatccaaacaacatcaactcataagaatcatttttaagcaagtatatctaaacacaaatca 15603397  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||  ||| | |||||||| | || |||||||| | ||||||||||||||||||||||||||| ||  ||||  || ||||||||||||||    
T  15603398 attcacatcaaactcactttttaccataatcaattatctcaaactcaattctatcaaaatcaattctccccaccgtcaaaccaaacacacact 15603490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 451
Target Start/End: Complemental strand, 32238194 - 32238015
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||  ||  |||| |||   |||||||||||| |||| ||||||||  |   |    
T  32238194 acattcaaaatcagttttgattcaaactatccaaacaacatcaactcatatgaatcacttctaatatagtgtatccaaacataa-ccaattcacattcaa 32238096  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||    
T  32238095 ctcacttttaaccaaaatcaattcactcaaactcaattctatcaaaatcaattatcgccaccgctataccaaacacacact 32238015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 454
Target Start/End: Complemental strand, 14564289 - 14564099
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| || |||||||||||||||||||| || ||||||||||||||| ||||||||| ||  ||||||||   |  ||||||||| ||||| |||||||    
T  14564289 tcattatatattcaaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaaggtatccaaacataaatcaattca 14564190  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    | ||  | |||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||  | || ||  |||||||||||||||||    
T  14564189 tatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccgccgcccaaccaaacacacactaag 14564099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 277 - 450
Target Start/End: Original strand, 25312671 - 25312844
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||| ||||||||||| ||  ||||||||||||| ||| |||||| ||   |||||||  ||||||||||||| | ||| |||||||  ||  | |||||    
T  25312671 aaaagcaattttgattcaatgtatccaaacaacaacaattcataagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcacatctaactcact 25312770  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||    
T  25312771 tttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgttaccgccaaaccaaacacacac 25312844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 259 - 423
Target Start/End: Original strand, 49136460 - 49136624
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||  ||||||||   |||||||||||| ||||| ||    
T  49136460 tttggtcattgtacattcaaaatcaattttgattaaaattattcaaacaacatcaactcataagaatcacttttaagtgagtgtatccaaacataaatca 49136559  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||  ||| | |||||||||| || |||||||||| |||||||||||| || || ||||||||    
T  49136560 attcacatcaaactcacttttaaccataatcaattctctcaaactcaattataccagaatcaatt 49136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 276 - 451
Target Start/End: Original strand, 48550172 - 48550347
Alignment:
Q  276 caaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcac 375  Q
    ||||||||||||| ||  || |||||||||||| ||||| |||||  || ||||||||||  |||| ||||||| ||||| ||||| |  ||  | ||||    
T  48550172 caaaatcaattttaatccaatctatccaaacaatatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcac 48550271  T
Q  376 ttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  48550272 ttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 48550347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 274 - 450
Target Start/End: Original strand, 48908228 - 48908402
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||  || ||||||||| | || ||||||||| |||| ||||||||  ||| | ||    
T  48908228 ttcaaaatcaattttgattcaagctatccaaacaacatcaacttatatgaattacttttaagcgag-gtatccaaacataa-ccaattcacatcaaactc 48908325  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||| ||||||||||||| |||||||||||  ||| |||||||||||||  | || ||| |||||||||||||    
T  48908326 acttttaaccaaaatcaattctctcaaactcaataatattaaaatcaattttcaccgccgccaaaccaaacacacac 48908402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 264 - 450
Target Start/End: Complemental strand, 26426257 - 26426072
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| |||||||| |||||||||||||| ||  ||||||||||| ||||||||| || ||  ||||||||  ||| ||||||||| |||| | |||| |    
T  26426257 tcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatccaaacataatc-aattta 26426159  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    | ||  | |||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||  ||||  ||||||||||||||||    
T  26426158 tatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccaccgtcataccaaacacacac 26426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 410
Target Start/End: Complemental strand, 48550576 - 48550424
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    |||||||||||  ||||| |||||||||||||||| |||||||||||||||||||||||||||| ||  |||| ||   |||| |||||||| ||||| |    
T  48550576 gtttgatcattacacatttaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtttatccaaacataaatc 48550477  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattct 410  Q
    ||||||  ||  | |||||||||| ||||||||||||| ||||| ||||||||    
T  48550476 aattcacatccaactcacttttaaccaaaatcaattctatcaaaatcaattct 48550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 272 - 451
Target Start/End: Original strand, 13167476 - 13167655
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    |||| |||| ||||||||||| || ||||||||||| ||| ||  ||||| ||  |||||||||   ||||||||||||||||| |||||||  |   |     
T  13167476 catttaaaagcaattttgattcaatctatccaaacatcattaatacataagaatcacttttaaatgggtgtatccaaatataaatcaattcacattcaac 13167575  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||    ||| ||||||||||||||||||    
T  13167576 tcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaatttttcctaccgccataccaaacacacact 13167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 277 - 451
Target Start/End: Original strand, 49519686 - 49519863
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||| ||  | ||||||||||||| ||||| |||||| ||  | |||||| |||||||||||||| |||||  ||||||  ||  | |||||    
T  49519686 aaaatcaattttaatacatactatccaaacaatatcaattcataagaatcatttttaagcaagtgtatccaaacataaataaattcacatccaactcact 49519785  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacca---ccataccaaacacacact 451  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||| ||  |||||   ||||||||||||||||||    
T  49519786 tttaaccaaaatcaattctctcaaactcaattctatcaaaaccaattctcaccaccaccgccataccaaacacacact 49519863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 258 - 444
Target Start/End: Complemental strand, 42945047 - 42944861
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| ||||| |||||| |||||||||||||||  | |||||||||||||||||||| ||||| ||  ||||||||  |||| |||| ||| ||||| |    
T  42945047 gtttggtcattatacatttaaaatcaattttgatacatactatccaaacaacatcaacacataagaatcacttttaagtaagtatatctaaacataaatc 42944948  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaac 444  Q
    ||||||  |   | |||||||||| ||||||||||||| ||||| |||||||||||||||| |||| | | |||| || ||||||||    
T  42944947 aattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaataaattcttgccaccgccgtaccaaac 42944861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 395
Target Start/End: Complemental strand, 56241983 - 56241847
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| |||||||||||||||||||||||||||  ||| |||||  |||||||||||| ||  ||||||| |  | |||||||||| ||||| ||    
T  56241983 tttggtcattatacattcaaaatcaattttgatttaaatcatctaaacattatcaactcataagaatcacttttacattaatgtatccaaacataaatca 56241884  T
Q  359 attcatctcatattcacttttaatcaaaatcaattct 395  Q
    |||||| ||| | ||||||||||||||||||||||||    
T  56241883 attcatatcaaactcacttttaatcaaaatcaattct 56241847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 2175290 - 2175161
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||| ||||||||||||||| ||| |||||||||||||||||||||| ||| | ||  |||||||| | |||| ||||||| ||||| |||||||    
T  2175290 tcattgtacgttcaaaatcaattttaattcaaactatccaaacaacatcaacccatcaaaatcacttttaagcgagtgcatccaaacataaatcaattca 2175191  T
Q  364 tctcatattcacttttaatcaaaatcaatt 393  Q
      ||| | ||||||||||||||||||||||    
T  2175190 catcaaactcacttttaatcaaaatcaatt 2175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 54152995 - 54153170
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| | ||  |||| ||   |||||||| |||| || || |||||||  |   |    
T  54152995 acattcaaaatcaattttgattcaaactattcaaacaacatcaactcatgagaatcacttctagtaaagtgtattcaaacat-aatcaattcacattcaa 54153093  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
     |||||||||| ||||||||||||  |||||||||||| ||| |||||||||| ||| |||| | ||||||||||||    
T  54153094 ctcacttttaaccaaaatcaattcactcaaactcaattatattaaaatcaattatcgccaccgctataccaaacaca 54153170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 423
Target Start/End: Complemental strand, 54735786 - 54735635
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||| ||||||||||||||||| ||  |||||||||||||||||||| ||  ||||||||  |  ||| |||||| ||||||||||| |  ||| |    
T  54735786 acattcaagatcaattttgatttaaaatactcaaacaacatcaactcataagaatcacttttaagtatatgtttccaaacataaaccaatttacatcaaa 54735687  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     |||  ||||| ||||||||||| | |||||||||||||||||||||||||||    
T  54735686 ctca-atttaaccaaaatcaattttctcaaactcaattctatcaaaatcaatt 54735635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 449
Target Start/End: Original strand, 14054801 - 14054979
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||| ||||||||||||| ||||||| ||| |||||||||||||||   || ||  ||||||| | |||| |||||||| ||||| |||||||  ||| |    
T  14054801 acatccaaaatcaattttaatttaaagtattcaaacaacatcaacttgaaataatcacttttatataagtttatccaaacataaatcaattcacatcaaa 14054900  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
     |||||||| |  ||| |||||||| |||||||||||| | ||||||||||||  ||||||  || |||||||||||||    
T  14054901 ctcacttttgactaaactcaattctttcaaactcaattatgtcaaaatcaattcccgtcactgccgtaccaaacacaca 14054979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 271 - 408
Target Start/End: Complemental strand, 4954187 - 4954050
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| ||||| |||||||||| || ||||||||||||||||||||||||| ||  ||||||||   || ||| ||||| ||||| |||||||  ||| |    
T  4954187 acatttaaaattaattttgattcaacctatccaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaa 4954088  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaatt 408  Q
     |||||||||| ||||||||||||| ||||| ||||||    
T  4954087 ctcacttttaaccaaaatcaattctctcaaaatcaatt 4954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 453
Target Start/End: Original strand, 39187750 - 39187866
Alignment:
Q  337 aagtgtatccaaatataaaccaattcatct-catattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccacc 435  Q
    ||||||||||||| ||||| |||||||  | || ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||| ||    
T  39187750 aagtgtatccaaacataaatcaattcacattcaaatt-acttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgcc 39187848  T
Q  436 ataccaaacacacactaa 453  Q
    | ||||||||||||||||    
T  39187849 aaaccaaacacacactaa 39187866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 271 - 423
Target Start/End: Original strand, 14075965 - 14076116
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||| || |||||||||||||| ||  ||||||||||||| |||||| ||  ||||||||  |  ||| |||||| ||||| ||||| |  ||| |    
T  14075965 acattcaagattaattttgatttaaagtactcaaacaacatcaattcataagaatcacttttaagtatatgtttccaaacataaatcaatttacatcaaa 14076064  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     ||||||| || ||||||||||| | |||||||||||||||||||||||||||    
T  14076065 ctcacttt-aaccaaaatcaattttctcaaactcaattctatcaaaatcaatt 14076116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 423
Target Start/End: Original strand, 46926054 - 46926150
Alignment:
Q  327 acttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||| |||||||||||| ||||| |||||||  ||  | |||||||||| ||||| ||||| | |||||||||||||||||||||||||||    
T  46926054 acttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaattctatcaaaatcaatt 46926150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 55638790 - 55638718
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaac 444  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||| | |||||| |||||||    
T  55638790 tcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccgccaccaaaccaaac 55638718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 271 - 450
Target Start/End: Complemental strand, 31520506 - 31520328
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||| ||| |||||| ||||| ||||||||||||||| ||  ||||||||  |||  |||| ||| ||||| | |||||   |  |    
T  31520506 acatttaaaatcaatttttattcaaactacccaaaaaacatcaactcataaaaatcacttttaat-aagcatatctaaacataaatccattcacacccaa 31520408  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     |||||||||| |||||| |||||| |||||||  |||||| ||||||||||| ||| || | | |||||||||||||||    
T  31520407 ctcacttttaaccaaaattaattctttcaaacttcattctaccaaaatcaattctcgccatcgctataccaaacacacac 31520328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 423
Target Start/End: Original strand, 38693996 - 38694150
Alignment:
Q  269 ttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaatt--catct 366  Q
    ||||||||||||| |||||||||||||| ||| ||| ||| |||||| ||||| ||  |||||||| | |||||||||||| |||||| ||||  || ||    
T  38693996 ttacattcaaaattaattttgatttaaattattcaagcaagatcaacccataagaatcacttttaagcgagtgtatccaaacataaactaatttgca-ct 38694094  T
Q  367 catattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    || | | |||||||  ||||||||||||| | |||||||||  ||||||||| ||||    
T  38694095 ca-acttacttttagacaaaatcaattcttttaaactcaatcatatcaaaattaatt 38694150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 452
Target Start/End: Original strand, 41866176 - 41866285
Alignment:
Q  343 atccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaa 442  Q
    ||||||| ||||| |||||||  ||  | ||||||||||  ||| |||||||  |||||||||||| |||||||||||||| ||| |||| ||| |||||    
T  41866176 atccaaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaattttatcaaaatcaattatcgccaccgccaaaccaa 41866275  T
Q  443 acacacacta 452  Q
    ||||||||||    
T  41866276 acacacacta 41866285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 450
Target Start/End: Original strand, 5835799 - 5835878
Alignment:
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    ||||| ||||||||||||||||||||  |||| ||||||| ||||||||||||||||||||| ||   |||||||||||||    
T  5835799 attcagttttaatcaaaatcaattcta-caaaatcaattcaatcaaaatcaattttcgtcacaacataaccaaacacacac 5835878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 453
Target Start/End: Original strand, 53532028 - 53532109
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    ||||||||||  |||||||||| |||||||||||||| |||||||||||||| ||  |||| ||  |||||||||| |||||    
T  53532028 tcacttttaactaaaatcaattatgtcaaactcaattttatcaaaatcaattctcaccaccgccgaaccaaacacatactaa 53532109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 19599531 - 19599487
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaa 416  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||    
T  19599531 tcacttttattcaaaatcaattctctcaaactcaattctatcaaa 19599487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 361
Target Start/End: Complemental strand, 30887289 - 30887199
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaatt 361  Q
    |||||||||||||||||||||  |||| ||||||||| ||| ||||||||| ||  ||||||| |   ||||||||||| ||||| |||||    
T  30887289 acattcaaaatcaattttgatacaaaccatccaaacatcattaactcataagaatcacttttatattggtgtatccaaacataaatcaatt 30887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 450
Target Start/End: Original strand, 54655295 - 54655361
Alignment:
Q  384 aaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||||| | | |||||||||| | |||||||||||| |||||||| || ||||||||||||||    
T  54655295 aaaatcaattattttaaactcaattatgtcaaaatcaattatcgtcaccgccgtaccaaacacacac 54655361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 33574229 - 33574274
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaa 417  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||    
T  33574229 tcacttttaaccaaaattaattctctcaaactcaattctatcaaaa 33574274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 45106357 - 45106398
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  45106357 tacattcaaaatcaattttgataaaaactatccaaacaacat 45106398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 54655200 - 54655245
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaact 316  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||    
T  54655200 acatccaaaatcaattttaatttaaagtatccaaacaacatcaact 54655245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 4649953 - 4649885
Alignment:
Q  383 caaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||||||||  |||||||||||| |||||||||||||| |  |||||||   ||||||||||||||    
T  4649953 caaaatcaattcactcaaactcaattttatcaaaatcaattctactcaccacagaaccaaacacacact 4649885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 55638921 - 55638873
Alignment:
Q  273 attcaaaatcaattttgatttaaactatccaaacaacatcaactcataa 321  Q
    |||||||||||||||||||| | | ||||||||||| ||||||||||||    
T  55638921 attcaaaatcaattttgattcatattatccaaacaatatcaactcataa 55638873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 5025484 - 5025519
Alignment:
Q  276 caaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5025484 caaaatcaattttgattcaaactatccaaacaacat 5025519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 16202585 - 16202504
Alignment:
Q  340 tgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||| ||||| |||||| ||||| | ||| ||||| |||||||||||||| ||||| ||||||| |||| ||||||||    
T  16202585 tgtatccaaacataaatcaattc-tctcaaaatcaatttta-tcaaaatcaattctatcaaaatcaattcaatcagaatcaatt 16202504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 447
Target Start/End: Complemental strand, 45780044 - 45779970
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
    |||||||| | ||||||||||| | ||||||||||||||||| ||||||||| || || || ||| ||||||||||    
T  45780044 tcactttttaccaaaatcaatt-tctcaaactcaattctatcgaaatcaattctcatcgccgccaaaccaaacaca 45779970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 423
Target Start/End: Original strand, 48556616 - 48556655
Alignment:
Q  384 aaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  48556616 aaaatcaattttatcaaactcaattctatcaaaatcaatt 48556655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 453
Target Start/End: Original strand, 54683453 - 54683520
Alignment:
Q  386 aatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||||||  ||||| |||||||||||||||||||||||  ||||| |   ||||||||||||||||    
T  54683453 aatcaattcattcaaaatcaattctatcaaaatcaatttttttcaccgcagaaccaaacacacactaa 54683520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 426
Target Start/End: Original strand, 38263954 - 38264004
Alignment:
Q  376 ttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttc 426  Q
    |||||| |||||| |||| | |||||||||||| |||||||||||||||||    
T  38263954 ttttaagcaaaattaattttctcaaactcaattatatcaaaatcaattttc 38264004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 423
Target Start/End: Original strand, 48407572 - 48407610
Alignment:
Q  385 aaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  48407572 aaatcaattctgtcacaatcaattctatcaaaatcaatt 48407610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 426
Target Start/End: Original strand, 523166 - 523255
Alignment:
Q  337 aagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttc 426  Q
    ||||| ||||||| ||||| |||||||| |   | ||||||||   ||||||||||| |||||| |||||||  ||||||||||||||||    
T  523166 aagtgaatccaaacataaatcaattcatattgaactcactttttcccaaaatcaattttgtcaagctcaattaaatcaaaatcaattttc 523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 16202655 - 16202614
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  16202655 tacattcaaaagcaattttgatcaaaactatccaaacaacat 16202614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 22605786 - 22605745
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  22605786 tcaaaatcaattctgtcccaatcaattctatcaaaatcaatt 22605745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 22605879 - 22605838
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  22605879 tacattcaaaagcaattttgataaaaactatccaaacaacat 22605838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 451
Target Start/End: Complemental strand, 26459897 - 26459852
Alignment:
Q  406 attctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||||||||| |||| ||| |||| ||||||||||||||||||    
T  26459897 attctatcaaaattaattctcgccaccgccataccaaacacacact 26459852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 28963285 - 28963244
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  28963285 tcaaaatcaattctgtcagaatcaattctatcagaatcaatt 28963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 28963380 - 28963339
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  28963380 tacattcaaaagcaattttgataaaaactatccaaacaacat 28963339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 29385473 - 29385432
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  29385473 tcaaaatcaattctgtcaaaatcaattctattagaatcaatt 29385432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 30417917 - 30417876
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  30417917 tacattcaaaagcaattttgataaaaactatccaaacaacat 30417876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 39733396 - 39733437
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||||||||| |||||||||  ||||||||||||||||||    
T  39733396 tacattcaaaattaattttgatcaaaactatccaaacaacat 39733437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 50523387 - 50523350
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  50523387 ttcaaaatcaattttgatcaaaactatccaaacaacat 50523350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 51677641 - 51677682
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  51677641 tcaaaatcaattctgtcagaatcaattctatcagaatcaatt 51677682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 15619567 - 15619610
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaac 315  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||    
T  15619567 acattcaagatca-ttttgattcaaactatccaaacaacatcaac 15619610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 8e-56; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 264 - 450
Target Start/End: Original strand, 42318288 - 42318473
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| ||  ||||| ||||||||||||||||| |||| | ||||||    
T  42318288 tcattttacattcaaaatcaattttgattcaaactatccaaacgaaatcaactcataagaatcactttcaaacaagtgtatccaaacataatc-aattca 42318386  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     |||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  42318387 cctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatcgtcaccgctataccaaacacacac 42318473  T

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Target: chr3; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 258 - 453
Target Start/End: Original strand, 10334090 - 10334285
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| ||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||| || ||||||||   ||||||||||||| ||||| |    
T  10334090 gtttggtcattataaattcaaaatcaattttgattcaaactatccaaacaacgtcaactcataagaattacttttagtaaagtgtatccaaacataaatc 10334189  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    ||||||| |   | | |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  10334190 aattcatattcaactgacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgccatatcaaacacacactaa 10334285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 264 - 451
Target Start/End: Complemental strand, 38125584 - 38125398
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    |||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||| ||  ||||| ||||||||||||||||| |||| | ||||||    
T  38125584 tcattttacattcaaaattaattttgattcaaactatccaaacgaaatcaactcataagaatcactttcaaacaagtgtatccaaacataatc-aattca 38125486  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||| |  ||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  38125485 cctcaaacccacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcgtcaccgccataccaaacacacact 38125398  T

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Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 271 - 450
Target Start/End: Complemental strand, 10853403 - 10853224
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||  ||||||||   ||| |||||||| ||||| ||||| || | | |    
T  10853403 acattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacataaatcaatttatattaaa 10853304  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||| | |||||||||||||||    
T  10853303 ctcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 10853224  T

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Target: chr3; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 271 - 452
Target Start/End: Original strand, 3348208 - 3348389
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| || |||||||||  ||||||||||||| ||||| ||||| |  ||  |    
T  3348208 acattcaaaatcaattttgatataaaatatccaaacaacatcaactcataagaattacttttaaggaagtgtatccaaacataaatcaatttacatccaa 3348307  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
     |||||| ||| ||||||||||||  | ||||||||||||||||||||||||| ||| |||| | || ||||||||||||||    
T  3348308 ctcacttctaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgctatgccaaacacacacta 3348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 258 - 451
Target Start/End: Complemental strand, 38172456 - 38172263
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| |||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||  |||| ||   ||||||||||||| ||||| |    
T  38172456 gtttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatc 38172357  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||  ||  | |||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||  |||| ||| ||||||||||||||    
T  38172356 aattcacatcccactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattctccccaccgccaaaccaaacacacact 38172263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 259 - 454
Target Start/End: Original strand, 50664712 - 50664906
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    ||||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||| ||| ||  |||| |||    ||||||||||| ||||| ||    
T  50664712 tttgatcattacacattcaaaatcaattttaatttaaactatctaaacaacat-aactcttaagaatcacttctaagtgtgtgtatccaaacataaatca 50664810  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    |||||  |   | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  50664811 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacactaag 50664906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 271 - 452
Target Start/End: Complemental strand, 52966945 - 52966764
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||||||| || ||||| ||||||||||||||||||| ||  ||||||||   || ||| ||||| ||||| |||||||  ||| |    
T  52966945 acatttaaaatcaattttgattcaacctatctaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaa 52966846  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
     |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||  |||| ||| |||||||||||||||    
T  52966845 gtcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattttctccacctccaaaccaaacacacacta 52966764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 259 - 416
Target Start/End: Original strand, 53179802 - 53179958
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||| ||||||||||||| ||||| ||    
T  53179802 tttggtcattgtacattcaaaatcaattttgatttaaactatccaaacaa-atcaactcataaaaatcacttttaaaaaagtgtatccaaacataaatca 53179900  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaa 416  Q
    ||| |  ||| | |||||||||| ||||||||||| | | ||||||||||||||||||    
T  53179901 atttacatcaaactcacttttaaccaaaatcaattatataaaactcaattctatcaaa 53179958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 271 - 423
Target Start/End: Original strand, 35930703 - 35930855
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||||||||||||||||||| |||||||||  |||||||||||| ||  |||| || |  |||||||||||  ||||| |||||||| ||| |    
T  35930703 acattcaaaatcaattttgatttaaaccatccaaacattatcaactcataagaatgacttatacattagtgtatccaagcataaatcaattcatatcaaa 35930802  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     ||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  35930803 ctcacttttaataaaaatcaattctctcaaactcaattctatcaaaatcaatt 35930855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 272 - 451
Target Start/End: Complemental strand, 15511510 - 15511332
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||  ||||||||  ||| ||||||||| ||||| |||||||   |  |     
T  15511510 cattcaaaatcaatttttattcaaactatccaaacaatatcaactcataaaaatcacttttaat-aagcgtatccaaacataaatcaattcacacccaac 15511412  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||||||||||| ||| |||| ||||||||||||||||||    
T  15511411 tcacttttaaccaaaatcaattctttcaaactccgttctatcaaaatcaattatcgccaccgccataccaaacacacact 15511332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 259 - 450
Target Start/End: Original strand, 26519617 - 26519808
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||| ||||||||||||| || ||||||||||||||| ||||||| |||| ||  ||||||||   |||||||||||| ||||| ||    
T  26519617 tttggtcattttacatttaaaatcaattttgtttcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 26519716  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||  |   | |||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||  |||| | |||||||||||||||    
T  26519717 attcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacacacac 26519808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 272 - 455
Target Start/End: Original strand, 53074869 - 53075051
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||| ||  ||||||||   |||||||||||| |||| | |||||| |||| |     
T  53074869 catttaaaatcaattttgattcaaactatccaaacaacatccactcataagaatcacttttaagtgagtgtatccaaacataatc-aattcacctcaaac 53074967  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||||||||||  | || || || ||||||||||| ||||    
T  53074968 tcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattttcaccgccgccgtatcaaacacacacgaaga 53075051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 264 - 455
Target Start/End: Original strand, 23496282 - 23496466
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |  || ||  |||||||       ||||||||| ||||| |||||||    
T  23496282 tcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccgcaagaatcactttta-------gtatccaaacataaatcaattca 23496374  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
      |   | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| || || || ||||||||||||||||||||||    
T  23496375 cattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcctcgccgccataccaaacacacactaaga 23496466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 451
Target Start/End: Original strand, 35425299 - 35425477
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||| ||  |||| |    ||||||||||||| |||| | ||||||  |   |    
T  35425299 acattcaaaatcaattttgattcaaactatccaaacaatatcaactcataagaatcacttctgttaaagtgtatccaaacataatc-aattcacattcaa 35425397  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| || || ||||||||||||    
T  35425398 ctcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgcccta-caaacacacact 35425477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 264 - 451
Target Start/End: Complemental strand, 48189584 - 48189398
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaatt-c 362  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||  |||| |    | ||||||||||| |||| | | || |    
T  48189584 tcattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctgttaacgtgtatccaaacataatcaatttac 48189485  T
Q  363 atctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    || ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| || |||||||||||||||    
T  48189484 at-tca-actcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattatcgccaccgccctaccaaacacacact 48189398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 271 - 452
Target Start/End: Complemental strand, 30811667 - 30811487
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| |||||| ||  |||| |    ||||||||||||| |||| | ||||||  |   |    
T  30811667 acattcaaaatcaattttgattcaaactatccaaacaatatcaagtcataagaatcacttctgttaaagtgtatccaaacataatc-aattcacattcaa 30811569  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
     |||||||||||||||||||||||| ||||| |||||| |||||||||||||| |||||||| || ||||||||||||||||    
T  30811568 ctcacttttaatcaaaatcaattctctcaaattcaattatatcaaaatcaattctcgtcaccgccctaccaaacacacacta 30811487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 271 - 451
Target Start/End: Original strand, 20813111 - 20813290
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||| || |||| |||||||| | ||| |||||||  ||  |    
T  20813111 acattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttgaataagtatatccaaacaaaaatcaattcaaatccaa 20813210  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||| ||||  ||||||| |||||||| |||||||||||||||||| ||  ||||   ||||||||||||||||    
T  20813211 ctcacttttaaccaaacacaattctctcaaactc-attctatcaaaatcaattctctccaccgatataccaaacacacact 20813290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 271 - 453
Target Start/End: Complemental strand, 44939550 - 44939370
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||  |||| ||   || |||||||||| |||| | ||||||| |   |    
T  44939550 acattcaaaattaattttgattaaaactattcaaacaacatcaactcataagaatcacttatagtaaa-tgtatccaaacataatc-aattcatattcaa 44939453  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
     |||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||| |||| | ||||||||||||||||||    
T  44939452 ctcacttttaatcaaaatcaattcactcaaattcaattctatcaaaatcaattatcgccaccgctataccaaacacacactaa 44939370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 271 - 411
Target Start/End: Original strand, 44224727 - 44224867
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||||| ||  ||||||||   |||||||||||| ||||| |||||||| ||| |    
T  44224727 acattcaaaatcaattttgactaaaattatccaaacaacatcaactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcatatcaaa 44224826  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattcta 411  Q
     |||||||||| || |||||||| | |||||||||||||||    
T  44224827 ctcacttttaaccataatcaattatctcaaactcaattcta 44224867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 271 - 450
Target Start/End: Original strand, 38340771 - 38340949
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||| ||| |||||||||||||||| |||||| |||| || |||||||||  |||  |||||||| ||||| |||||||  ||  |    
T  38340771 acatttaaaatcaatttttattcaaactatccaaacaacgtcaacttataaaaattacttttaat-aagcatatccaaacataaatcaattcacatccaa 38340869  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     |||||||||| ||||||||||||| |||||||  |||||||||||||||||| ||  || | |||||||||||||||||    
T  38340870 ctcacttttaaccaaaatcaattctttcaaacttcattctatcaaaatcaattctcaccaacgccataccaaacacacac 38340949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 452
Target Start/End: Original strand, 42475680 - 42475855
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||| ||||||||||| ||  ||||||||||||| ||| |||||| ||   |||||||  |||||||| |||| | ||| |||||||  ||  | |||||    
T  42475680 aaaagcaattttgattcaatgtatccaaacaacaacaattcataagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcacatctaactcact 42475779  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| ||| ||||||| |||||||    
T  42475780 tttaatcaaaatcaattctctcaaactcaattctataaaaatcaattctcgtcaccgccaaaccaaacgcacacta 42475855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 449
Target Start/End: Complemental strand, 16246243 - 16246054
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||| ||| ||  |||| ||   |||||| |||||| ||||| |    
T  16246243 gtttgatcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcctaagaatcacttctattaaagtgtttccaaacataaatc 16246144  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||| |  ||  | ||||||||||  |||||||||||  |||||||||||||||| || ||||||| |||  ||| ||| ||||||||||||    
T  16246143 aatttacatctaactcacttttaactaaaatcaattc--tcaaactcaattctattaatatcaattctcgctaccgccaaaccaaacacaca 16246054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 274 - 432
Target Start/End: Complemental strand, 23207199 - 23207043
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||| | | |||| |||| ||||||||||||| ||||| |||||||  ||| | ||    
T  23207199 ttcaaaattaattttgattcaaactatc-aaacaacatcaactcataaaatc-acttgtaaaaaagtgtatccaaacataaatcaattcacatcaaactc 23207102  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacc 432  Q
    | |||||| ||||||||||| |  |||| |||||| |||||||||||||||||| ||||    
T  23207101 atttttaaccaaaatcaattataacaaaatcaattatatcaaaatcaattttcgccacc 23207043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 275 - 423
Target Start/End: Complemental strand, 8424861 - 8424714
Alignment:
Q  275 tcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattca 374  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| ||  |||| ||   ||||||||||||| |||| | ||||||  |   | |||    
T  8424861 tcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattgaagtgtatccaaacataatc-aattcacgttcaactca 8424763  T
Q  375 cttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  8424762 cttttaaccaaaatcaattctctcaaactcaattctatcaaattcaatt 8424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 4984602 - 4984728
Alignment:
Q  327 acttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttc 426  Q
    |||||||||| |||||||||||| ||||| |||||||  ||  | |||||||||| ||||||||||| | ||||| |||||| |||||||||||||| ||    
T  4984602 acttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaattatatcaaaatcaattctc 4984701  T
Q  427 gtcaccaccataccaaacacacactaa 453  Q
      |||| ||||||||||||||||||||    
T  4984702 cccaccgccataccaaacacacactaa 4984728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 259 - 449
Target Start/End: Original strand, 21224943 - 21225133
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| |||| ||| |||||||||||||| |||||||| |||| |||||||||| ||| ||   |||||||  ||||||||||||| ||| | ||    
T  21224943 tttggtcattatacactcataatcaattttgattcaaactatcaaaacgacatcaactcgtaagaatcgcttttaagaaagtgtatccaaacatatatca 21225042  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    ||| |  ||| | |||||||||| ||||||||||||| ||||||||||||||||  | ||||||| ||| | || | | ||||||||||||    
T  21225043 atttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatagagatcaattctcgccgccgctaaaccaaacacaca 21225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 273 - 410
Target Start/End: Original strand, 31084175 - 31084311
Alignment:
Q  273 attcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatatt 372  Q
    |||||||||||||| ||||| |||||||||||| || ||||| |||||| ||  |||||| || ||||||||||||| ||||| |||||||  |   | |    
T  31084175 attcaaaatcaattatgattcaaactatccaaataatatcaagtcataagaatcactttt-aagaagtgtatccaaacataaatcaattcacattcaact 31084273  T
Q  373 cacttttaatcaaaatcaattctgtcaaactcaattct 410  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  31084274 cacttttaatcaaaatcaattctttcaaaatcaattct 31084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 363
Target Start/End: Complemental strand, 31619034 - 31618931
Alignment:
Q  260 ttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaa 359  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||  |||| |||   || ||||||||| ||||| |||    
T  31619034 ttgatcattatacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttctaagtgagagtatccaaacataaatcaa 31618935  T
Q  360 ttca 363  Q
    ||||    
T  31618934 ttca 31618931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 372 - 451
Target Start/End: Original strand, 55154567 - 55154646
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||    
T  55154567 tcacttttaactaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccactgccataccaaacacacact 55154646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 19877483 - 19877540
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtc 429  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  19877483 tcacttttaaccaaaatcaattctttcaaactcaattctatcaaaataaattttcgtc 19877540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 448
Target Start/End: Complemental strand, 45423905 - 45423728
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcat 369  Q
    ||||| ||||||||||||||||| || ||||||||||||||| || | |||| ||  |||||||    | | |||||||| ||||||||||| |  |||     
T  45423905 tacatccaaaatcaattttgattcaagctatccaaacaacatgaattgataagaatcacttttactttaatatatccaaacataaaccaattaagttca- 45423807  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
    | |||||||||  ||||||||||||| ||| | |||||| |  ||||||||||||||| ||||||   |||||||||||    
T  45423806 actcacttttaggcaaaatcaattctatcagaatcaattatgccaaaatcaattttcgccaccacagaaccaaacacac 45423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 454
Target Start/End: Original strand, 52813281 - 52813363
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    |||||| ||| ||||||||||||  |||||||||||||||||||||||||||||  ||||| |   |||||||||||||||||    
T  52813281 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattttactcaccgcagaaccaaacacacactaag 52813363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 34561174 - 34561228
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttc 426  Q
    |||||||||| ||||||||||| | ||||||| ||||||||||||||||||||||    
T  34561174 tcacttttaaccaaaatcaattttatcaaacttaattctatcaaaatcaattttc 34561228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 423
Target Start/End: Complemental strand, 49526805 - 49526653
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatc-tcat 369  Q
    |||||||||| ||||||||||||| |||||  ||||||||| || | |||| ||  | ||||| |  | |||||||||| ||||| ||||| |   |||     
T  49526805 acattcaaaagcaattttgatttagactatttaaacaacataaattgataagaatcaattttacatgaatgtatccaaacataaatcaatttacaatca- 49526707  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||||||||||| ||||| ||||||  |||||| ||||||    
T  49526706 attcacttttaatcaaaatcaattctatcaaaatcaatttcatcaaactcaatt 49526653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 14651137 - 14651086
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  14651137 tcacttttaatcaaaatcaattctatcaaaatcaattttattaaaatcaatt 14651086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 22736946 - 22737009
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaa 334  Q
    |||||||||||||||||||||| |||| |||| |||||||| ||||||||| ||  ||||||||    
T  22736946 acattcaaaatcaattttgattcaaaccatcccaacaacattaactcataataatcacttttaa 22737009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 30811288 - 30811329
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  30811288 tacattcaaaatcaattttgatcaaaactatccaaacaacat 30811329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 48253920 - 48253879
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  48253920 tcaaaatcaattctgtcagaatcaattctatcaaaatcaatt 48253879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 316
Target Start/End: Complemental strand, 55087630 - 55087593
Alignment:
Q  279 aatcaattttgatttaaactatccaaacaacatcaact 316  Q
    |||||||||||||| |||||||||||||||||||||||    
T  55087630 aatcaattttgattcaaactatccaaacaacatcaact 55087593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 29716721 - 29716674
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatc 419  Q
    |||||||||| ||||||||||||| ||||| |||||| ||||||||||    
T  29716721 tcacttttaaccaaaatcaattctctcaaattcaattttatcaaaatc 29716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 32357479 - 32357566
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaatt 361  Q
    ||||||||||||||| ||| ||| || ||||||||||||||| ||||| ||  |||||||||  ||||| | |||| ||||| |||||    
T  32357479 ttcaaaatcaattttaattcaaagtacccaaacaacatcaacacataagaatcacttttaaatgagtgttttcaaacataaatcaatt 32357566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 41459292 - 41459347
Alignment:
Q  398 caaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||| ||||||| |||||||||||||||||||||||    ||||||||||||||||    
T  41459292 caaagtcaattcaatcaaaatcaattttcgtcaccatagaaccaaacacacactaa 41459347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 14959684 - 14959734
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataa 321  Q
    |||||||||||||| ||||||| |||  ||| |||||||||||||||||||    
T  14959684 acattcaaaatcaagtttgattcaaatcatctaaacaacatcaactcataa 14959734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 31618422 - 31618368
Alignment:
Q  397 tcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||||||||||||||||||||||| |   ||||  |||||||||||||||||    
T  31618422 tcaaactcaattctatcaaaatcaattcttcccaccgtcataccaaacacacact 31618368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 312
Target Start/End: Complemental strand, 33329478 - 33329436
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatc 312  Q
    ||||||||||| ||||||||||  |||||||||||||||||||    
T  33329478 tacattcaaaagcaattttgatcgaaactatccaaacaacatc 33329436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 35930879 - 35930929
Alignment:
Q  397 tcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
    ||||||||||||||||||||||||||| ||  |||||  ||||||||||||    
T  35930879 tcaaactcaattctatcaaaatcaattctcaccaccagtataccaaacaca 35930929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 37117556 - 37117658
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||||||||| ||||| |||||| ||||||||||| |||| || || || | |||| ||| | |||||||  ||| ||| |||||||||| ||    
T  37117556 tttgctcattttacatttaaaattaattttaatttaaactattcaaataatattaaattataataaccatttttaaatgagtatattcaaatataaatca 37117655  T
Q  359 att 361  Q
    |||    
T  37117656 att 37117658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 311
Target Start/End: Complemental strand, 37698519 - 37698485
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||||||||||||| ||||||||||||||||||    
T  37698519 aaaatcaattttgattcaaactatccaaacaacat 37698485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 312
Target Start/End: Complemental strand, 44610352 - 44610311
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatc 312  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  44610352 tacattcaaaatcaattttga-tcaaactatccaaacaacatc 44610311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 53567998 - 53568051
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttc 426  Q
    |||||||||||||||||||||| ||| ||| |||||||  |||||||||||||||    
T  53567998 tcacttttaatcaaaatcaattttgt-aaaatcaattcactcaaaatcaattttc 53568051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 449
Target Start/End: Complemental strand, 5046035 - 5045970
Alignment:
Q  384 aaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||||||||| ||| ||| ||||||| ||||||| |||||| || |||||| | ||||||||||||    
T  5046035 aaaatcaattttgtaaaaatcaattcaatcaaaaacaatttccgccaccacaaaaccaaacacaca 5045970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 11264277 - 11264318
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  11264277 tacattcaaaagcaattttgataaaaactatccaaacaacat 11264318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 28884258 - 28884299
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||||||||  |||||||||| ||||||||||||||||||    
T  28884258 tacattcaaaaataattttgattaaaactatccaaacaacat 28884299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 39252061 - 39252102
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  39252061 tacattcaaaagcaattttgataaaaactatccaaacaacat 39252102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 42074914 - 42074955
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||||||||||   |||||||||||||||||    
T  42074914 tacattcaaaatcaattttgataagaactatccaaacaacat 42074955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 45488526 - 45488485
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||| ||||| |||||||||||| ||||||||    
T  45488526 tcaaaatcaattctttcaaaatcaattctatcataatcaatt 45488485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 48254015 - 48253974
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  48254015 tacattcaaaagcaattttgataaaaactatccaaacaacat 48253974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 51230284 - 51230325
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||| ||||||  ||||||||||||||||||    
T  51230284 tacattcaaaatcaaatttgataaaaactatccaaacaacat 51230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 53078323 - 53078363
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||| ||||||||||||||||| ||||| ||||||||||||    
T  53078323 acatccaaaatcaattttgattcaaactgtccaaacaacat 53078363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 8402 - 8594
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  | ||||||| ||||||||||||| ||||| ||    
T  8402 tttggtcattgtacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataaaaatcatttttaaaaaagtgtatccaaacataaatca 8501  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||  ||| | |||||||||| ||||||||||| | ||||||||||||||||||||||||||| |   |||| ||||||||||||||||||    
T  8502 attcacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattattcccaccgccataccaaacacacact 8594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 271 - 456
Target Start/End: Complemental strand, 3622583 - 3622398
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| ||| ||  ||||||||  ||||||||||||| ||||| |||||||  ||  |    
T  3622583 acatttaaaatcaattttgatttatactatccaaacaacatcaactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaa 3622484  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaa 456  Q
     |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||    
T  3622483 ctcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataacaaacacacactaagaa 3622398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 259 - 423
Target Start/End: Original strand, 9456079 - 9456242
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||  ||||||||||||||||||||||| || || ||    
T  9456079 tttggtcattttacattcaaaatcaattttgattcaaactatccaaacaagatcaactcataagaatcacttttaaacaagtgtatccaaacat-aatca 9456177  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||| | |||| | |||||||||| ||||||||||||| || |||| |||||||||||||||||||    
T  9456178 atttacctcaaactcacttttaaccaaaatcaattctctcgaacttaattctatcaaaatcaatt 9456242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 274 - 448
Target Start/End: Complemental strand, 39391257 - 39391083
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| ||||||| ||||||||||||| |||||| ||  |||| |||  ||||||||||||| ||||| ||||||| |||| | ||    
T  39391257 ttcaaaatcaattttgattcaaactattcaaacaacatcaattcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactc 39391158  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
    |||||||| |||||||||||||   ||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  39391157 acttttaaccaaaatcaattctaaaaaaatcaattctatcaaaatcaattttcgccaccgccataccaaacacac 39391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 271 - 448
Target Start/End: Original strand, 48134566 - 48134742
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||  |||||||||||||| |||||||| || || ||||||  |||| |    
T  48134566 acattcaaaatcaattttgattcaaactatccaaacaacatcaacttataaaaatcacttttaaacaagtttatccaaacat-aatcaattctcctcaaa 48134664  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
      |||||||||  |||||||||||| |||||||||||||||||||||| ||||||||  ||| |||||||||||||||    
T  48134665 cccacttttaacaaaaatcaattctctcaaactcaattctatcaaaattaattttcgcaaccgccataccaaacacac 48134742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 258 - 454
Target Start/End: Original strand, 37562543 - 37562739
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| |||||  |||| ||||||||||||| ||| |||||||||||||||||||||||||||  ||  ||||||||| ||||||||||||| ||||| |    
T  37562543 gtttggtcattacacatacaaaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaacataaatc 37562642  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    ||||||  ||  | ||||||||||  |||||||||||| | ||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||    
T  37562643 aattcacatccaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattctccccaccgccaaaccaaacacacactaag 37562739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 264 - 426
Target Start/End: Complemental strand, 47217671 - 47217509
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||| ||||||||||||||| ||| |||||||||||||||||||||| ||| | ||  |||||||| | |||| ||||||| ||||| |||||||    
T  47217671 tcattgtacgttcaaaatcaattttaattcaaactatccaaacaacatcaacccatcaaaatcacttttaagcgagtgcatccaaacataaatcaattca 47217572  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttc 426  Q
      ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47217571 catcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttc 47217509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 274 - 451
Target Start/End: Original strand, 34010329 - 34010504
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||||||  ||||||| |||| || || || ||||| ||  | ||    
T  34010329 ttcaaaattaattttgattcaaactatccaaacaacatcaactcataagaaccacttttaaatgagtgtattcaaacat-aatcagttcatatccaactc 34010427  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||    
T  34010428 acttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgccaccgcca-accaaacacacact 34010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 450
Target Start/End: Original strand, 3342778 - 3342955
Alignment:
Q  273 attcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatatt 372  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| ||  |||| ||   ||||||||||||| ||||| |||||||| ||  | |    
T  3342778 attcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcatatccaact 3342877  T
Q  373 cacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||||  |||||||||||| |||||||||||||||||||||| |||| ||  |||| ||| |||||||||||||    
T  3342878 cacttttaactaaaatcaattctctcaaactcaattctatcaaaattaattctccccaccgccaaaccaaacacacac 3342955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 271 - 452
Target Start/End: Original strand, 37639416 - 37639597
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||| || || ||  ||||||||  |||| | |||||| ||||| |||||||  |   |    
T  37639416 acatttaaaattaattttgattcaaactatccaaacaacatcaacccacaagaatcacttttaataaagtttctccaaacataaatcaattcacattcaa 37639515  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  | || |||||||||||||||||||    
T  37639516 ttcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccataccaaacacacacta 37639597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 259 - 452
Target Start/End: Complemental strand, 43738074 - 43737881
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||  ||||||||| |||| |||||||| | ||| ||    
T  43738074 tttggtcatttcacattcaaaatcaattttgattcaaactatccaaacaacatccactcataagaatcacttttaaataagtttatccaaacaaaaatca 43737975  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    |||||| ||  | | |||||||||||||||||||||| | |||||||||| | | |||||||||| ||  |  | |||||| ||||||||||||    
T  43737974 attcatatctaactaacttttaatcaaaatcaattctcttaaactcaattatgttaaaatcaattctcaccgtcgccatactaaacacacacta 43737881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 277 - 452
Target Start/End: Original strand, 39977544 - 39977719
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||| ||||||| |||||||||||||||||||   || ||  ||||||| |  ||| |||||||| ||||| |||||||| ||| | |||||    
T  39977544 aaaatcaattttaatttaaagtatccaaacaacatcaacttgaaataataacttttatatgagtttatccaaaaataaatcaattcatatcaaactcact 39977643  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||| |  |||||||||||| ||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  39977644 tttgactaaaatcaattctttcaaactaaattctatcaaaatcaattatcgccaccgccataccaaacacacacta 39977719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 276 - 450
Target Start/End: Original strand, 41715648 - 41715822
Alignment:
Q  276 caaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcac 375  Q
    ||||||||||||| ||  || |||||||||||||||||| |||||  || ||||||||||  |||| ||||||| ||||| ||||| |  ||  | ||||    
T  41715648 caaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcac 41715747  T
Q  376 ttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||| ||| |||| |||||||||||||||||    
T  41715748 ttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacacacac 41715822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 43631828 - 43631642
Alignment:
Q  261 tgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaat 360  Q
    |||| ||| |||||||| |||||||||||||| ||  ||||||||||| ||||||||| || ||  ||||||||  |||  |||||||| |||| | |||    
T  43631828 tgataattatacattcacaatcaattttgattcaatatatccaaacaatatcaactcaaaagaatcacttttaattaagcatatccaaacataatc-aat 43631730  T
Q  361 tcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
    |||| ||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||| |||||||||||||||    
T  43631729 tcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccaccgccataccaaacacac 43631642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 274 - 452
Target Start/End: Complemental strand, 34366101 - 34365924
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| ||  |||||| || ||| ||||||||| ||||| |||||||   |  | |     
T  34366101 ttcaaaatcaatttttattcaaactatccaaacaacatcaactcataaaaatcactttt-aataagcgtatccaaacataaatcaattcacacccaacta 34366003  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||||||||  |||||||||||| |||||||| ||| |||||||||||||| | | |||| |||||||||||||||||||    
T  34366002 acttttaactaaaatcaattctttcaaactccattatatcaaaatcaattctagccaccgccataccaaacacacacta 34365924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 452
Target Start/End: Original strand, 3375476 - 3375657
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||  |||  |||||||||||||| |||||||| ||  ||||||||   |||||||||||| | ||| |||||||   || |    
T  3375476 acattcaaaatcaattttgatccaaatcatccaaacaacatcgactcataagaatcacttttaagtgagtgtatccaaacacaaatcaattcacaccaaa 3375575  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
     |||||||||| |||||| |||||| ||||||||||||||||||||||||||| ||  || |||| ||||||||||| ||||    
T  3375576 ctcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctctccatcaccgtaccaaacacatacta 3375657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 271 - 448
Target Start/End: Original strand, 47021905 - 47022082
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca-tctcat 369  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||| || ||| ||  || | ||   ||||||||||||| ||||| ||||||| | |||     
T  47021905 acattcaaaatcaattttcattcaaattatccaaacaacatcaattcgtaagaatcacatctagtaaagtgtatccaaacataaatcaattcactttcaa 47022004  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
     || |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  ||||| ||||||||||||||    
T  47022005 ctt-acttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccaccatcataccaaacacac 47022082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 451
Target Start/End: Original strand, 48459702 - 48459876
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||| ||  | ||||||||||||||||| | |||||| ||  ||||||||  ||||||||||||| ||||| |||||||  |   | |||||    
T  48459702 aaaatcaattttaatacatactatccaaacaacatccattcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacattcaactcact 48459801  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| ||  || |  |||||||||||||||||    
T  48459802 tttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaacgtcataccaaacacacact 48459876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 275 - 444
Target Start/End: Complemental strand, 44967518 - 44967349
Alignment:
Q  275 tcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattca 374  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||  |||| ||   |||||||| |||| ||||| |||||||  |   | |||    
T  44967518 tcaaaatcaattttgattcaaattatccaaacaacatcaactcataagaatcacttctattaaagtgtattcaaacataaatcaattcacattcaactca 44967419  T
Q  375 cttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaac 444  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||| |||  |||  ||||||||||    
T  44967418 cttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattctcgctaccgtcataccaaac 44967349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 452
Target Start/End: Complemental strand, 10372080 - 10371900
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| || || ||  |||| |||  || |||| ||||| ||||| |||||||  |   |     
T  10372080 cattcaaaatcaattttgattcaaactatccgaacaacatcaacccacaagaatcacttctaataaactgtaaccaaacataaatcaattcacattcaac 10371981  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  ||||    ||||||||||||||||    
T  10371980 tcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgttttaccaaacacacacta 10371900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 276 - 451
Target Start/End: Original strand, 32186931 - 32187106
Alignment:
Q  276 caaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcac 375  Q
    ||||||||||||| ||  || |||||||||||||||||| |||||  || ||||||||||  |||| ||||||| ||||| ||||| |  ||  | ||||    
T  32186931 caaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcac 32187030  T
Q  376 ttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||||||||||||||| | ||| | ||||||||||||||||||| ||| ||||  ||||||||||| |||||    
T  32187031 ttttaatcaaaatcaattctcttaaaattaattctatcaaaatcaattctcgccaccgtcataccaaacatacact 32187106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 271 - 449
Target Start/End: Original strand, 38230054 - 38230232
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| || |  ||  ||||||||  || |||||||||| ||||| |||||||  |   |    
T  38230054 acatttaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaaatgtatccaaacataaatcaattcacattcaa 38230153  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
     |||||||||| ||||||||||||| | ||| ||||||||||||||||||||| ||    || ||||||||||||||||    
T  38230154 ctcacttttaaccaaaatcaattctcttaaattcaattctatcaaaatcaattctctcggccgccataccaaacacaca 38230232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 423
Target Start/End: Complemental strand, 12632206 - 12632054
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||| || |||||||||||||||||||| ||  |||||||| | |||  |  |||| ||||| |||||||  ||  |    
T  12632206 acattcaaaatcaattttgattcaaacaattcaaacaacatcaactcataagaatcacttttaagcgagtacactcaaacataaatcaattcacatctaa 12632107  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     |||||||||| ||||||| ||||| ||||||  |||||||||||||||||||    
T  12632106 ctcacttttaaccaaaatctattctctcaaacaaaattctatcaaaatcaatt 12632054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 419
Target Start/End: Original strand, 3750678 - 3750820
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| |   | || ||   ||||||||||||| ||||| |||||||  ||  | |||||    
T  3750678 aaaattaattttgatttaaactatccaaacaacatcaattcataagattcaattatattaaagtgtatccaaacataaatcaattcacatccaactcact 3750777  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatc 419  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||    
T  3750778 tttaaccaaaatcaattctctcaaactcaattttattaaaatc 3750820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 451
Target Start/End: Original strand, 42904551 - 42904719
Alignment:
Q  283 aattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaat 382  Q
    |||||||||||||| ||| ||||||| || || |||||| ||  |||||||||| |||||||| ||| ||||| |||||||  ||  | ||| |||||      
T  42904551 aattttgatttaaaatatacaaacaaaattaattcataagaatcacttttaaacgagtgtatcaaaacataaatcaattcacatctaactcatttttatc 42904650  T
Q  383 caaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||| ||||||| ||||||||||||||||||||||  |||||   |||  ||||||||||||||||||    
T  42904651 caaaaacaattctctcaaactcaattctatcaaaattcatttttcccactgccataccaaacacacact 42904719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 451
Target Start/End: Complemental strand, 37008447 - 37008296
Alignment:
Q  297 ctatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctg 396  Q
    ||||||||||||||||||||||||| ||  |||| |||  |||||| |||||| ||||| |||| || |||| | |||||||||| ||||||||||||      
T  37008447 ctatccaaacaacatcaactcataagaatcacttataagaaagtgtctccaaacataaatcaat-cacctcaaactcacttttaaccaaaatcaattcca 37008349  T
Q  397 tcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||| |||||||||| ||||||| |||||| |||  | ||||||||||||||||    
T  37008348 acaaaatcaattctataaaaatcagttttcgccac--cgataccaaacacacact 37008296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 19097484 - 19097562
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||  | || |||||||||||||||||    
T  19097484 tcacttttaatcaaaatcaattctttcaaactcaattctatcaaaattaattctcaccgccgccataccaaacacacac 19097562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 404
Target Start/End: Original strand, 32205913 - 32206044
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||||||| | |||||| ||||||||| ||||||||| ||  ||||||||  ||||||||||||| ||||| |||||||  ||| |    
T  32205913 acatttaaaatcaattttgattcatactatc-aaacaacat-aactcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacatcaaa 32206010  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactc 404  Q
      |||||||||| |||||||||||| ||||||||    
T  32206011 cccacttttaattaaaatcaattctttcaaactc 32206044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 427
Target Start/End: Complemental strand, 40903291 - 40903135
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcat 369  Q
    ||||| |||||||||||||||||| ||||||||||||||||| || | |||| ||  |||||||    | | |||||||| ||||||||||| |  |||     
T  40903291 tacatccaaaatcaattttgatttgaactatccaaacaacatgaattgataaaaatcacttttactttaatatatccaaacataaaccaattaagttca- 40903193  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcg 427  Q
    | |||||||||  ||||||||||||| ||||| |||||| | ||||||||||||||||    
T  40903192 actcacttttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaattttcg 40903135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 47301687 - 47301630
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataa 321  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  47301687 tcattttacattcaaaatcaattttgattcaaactatccaaacaacatcaacccataa 47301630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 423
Target Start/End: Complemental strand, 34011082 - 34010932
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatcc-aaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcat-ctcatat 371  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||| ||  ||||||||   | ||| |||||| |||||  |||| |  |||| |     
T  34011082 ttcaaaatcaattttgatttaaagtaccccaaacaacatcaactcataagaatcacttttaagtgaatgtttccaaacataaattaatttacactcaaac 34010983  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||| || ||||||||||| | |||||||||||||||||||||||||||    
T  34010982 tcacttt-aaccaaaatcaattttctcaaactcaattctatcaaaatcaatt 34010932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 423
Target Start/End: Complemental strand, 36920293 - 36920149
Alignment:
Q  279 aatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttt 378  Q
    |||||||||||||| ||  || |||||||||||||||||| || ||  || |||||  ||  |||| |||| ||||| ||||| || ||  | |||||||    
T  36920293 aatcaattttgattcaatgtacccaaacaacatcaactcaaaagaatcacctttaattaaacgtattcaaacataaatcaatttatatctaactcacttt 36920194  T
Q  379 taatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  36920193 taaccaaaatcaattctttcaaactcaattttatcaaaattaatt 36920149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 451
Target Start/End: Complemental strand, 24770933 - 24770854
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||||| ||||||||||| | ||||||| |||||||||||||| |||| ||||||||  |||||||||| ||||||    
T  24770933 tcacttttaaccaaaatcaattatctcaaacttaattctatcaaaattaattctcgtcaccgtcataccaaacgcacact 24770854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 447
Target Start/End: Original strand, 46541687 - 46541762
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||   |||| ||| ||||||||||    
T  46541687 tcacttctaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttaaccaccgccaaaccaaacaca 46541762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 447
Target Start/End: Complemental strand, 386597 - 386428
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||||||| || |||||||||||||||||| |||||| ||  ||||||     ||| |||||||| ||||| |||||||  |     | |||    
T  386597 aaaatcaattttgattcaatctatccaaacaacatcaa-tcataagaatcacttttcggttagtatatccaaacataaatcaattcacattcagctaact 386499  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
    ||||| |||||||||| || |||||||||||| ||||||||||||||||   |||| ||| ||||||||||    
T  386498 tttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattttaaccaccgccaaaccaaacaca 386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 19095926 - 19096013
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||| ||  | |||||||| |||||||||||| || ||||||||||    
T  19095926 ttcaaaatcaattttgattcaaattatccaaacaacat-aactcataagaatcatttttaaacgagtgtatccaaacat-aaccaattca 19096013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 12964697 - 12964742
Alignment:
Q  384 aaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtc 429  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  12964697 aaaatcaattatctcaaactcaattctatcaaaatcaattttcgtc 12964742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 25472193 - 25472152
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  25472193 tcaaaatcaattctgtcaaaatcaattctatcaaaatcaatt 25472152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 414
Target Start/End: Original strand, 42740384 - 42740521
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||||||  | ||||||||||||| |||||| ||||| ||  ||||||||  |||| |||| ||| ||||| ||||| |  |   | | |||    
T  42740384 aaaatcaattttgatacatactatccaaacaatatcaacacataagaatcacttttaagtaagtatatctaaacataaatcaattaacattcaacttact 42740483  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatca 414  Q
    ||||| ||||||||||||| |||||||||||| |||||    
T  42740484 tttaaccaaaatcaattctctcaaactcaattatatca 42740521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 459
Target Start/End: Complemental strand, 42752326 - 42752126
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||||| ||| | |||||||||||||||||||| |||  |||||||||||||| || | |||| || || ||||     |  ||||||||| ||||| ||    
T  42752326 tttgataattatgcattcaaaatcaattttgatctaagttatccaaacaacatgaatttataagaattatttttgctttaaggtatccaaacataaatca 42752227  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaaat 458  Q
    |||||  |   | ||||||||||  ||||||||||||  |||| |||||||| |||||||||||| ||  |||| |   ||||||||||||||||| |||    
T  42752226 attcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaacacacactaagcaat 42752127  T
Q  459 t 459  Q
    |    
T  42752126 t 42752126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 456
Target Start/End: Complemental strand, 39634217 - 39634103
Alignment:
Q  342 tatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccatacca 441  Q
    |||||||| ||||| |||||||| |   | |||||||||| |||||||||||||  |||| |||||||| || ||||||||| ||  |||| |   ||||    
T  39634217 tatccaaacataaatcaattcatattcaactcacttttaaccaaaatcaattctaacaaaatcaattctgtccaaatcaattctctccaccgcagaacca 39634118  T
Q  442 aacacacactaagaa 456  Q
    |||||||||||||||    
T  39634117 aacacacactaagaa 39634103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 4035919 - 4035960
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  4035919 tacattcaaaagcaattttgattaaaactatccaaacaacat 4035960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 2839377 - 2839437
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacc 432  Q
    |||||||| || |||||| ||||| ||||| ||||||| |||| |||||||||||||||||    
T  2839377 tcacttttcataaaaatctattctatcaaaatcaattcaatcataatcaattttcgtcacc 2839437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 425
Target Start/End: Complemental strand, 25472178 - 25472135
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatttt 425  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||    
T  25472178 tcaaaatcaattctatcaaaatcaattctatcagaatcaatttt 25472135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 37886905 - 37886854
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaaca 310  Q
    |||||| ||| || ||| |||||||||||||||| |||||||||||||||||    
T  37886905 tttgataattatatatttaaaatcaattttgattcaaactatccaaacaaca 37886854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 12212490 - 12212440
Alignment:
Q  373 cacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||| ||| ||||||||||||  |||| ||||||||||||||||||||||    
T  12212490 cacttctaaccaaaatcaattcactcaagctcaattctatcaaaatcaatt 12212440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 26826952 - 26826993
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  26826952 tacattcaaaagcaattttgataaaaactatccaaacaacat 26826993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 37371339 - 37371380
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||||||| |||| | |||||||||||||||||||||    
T  37371339 tcaaaatcaattccgtcagaatcaattctatcaaaatcaatt 37371380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 41065340 - 41065381
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  41065340 tacattcaaaagcaattttgatcaaaactatccaaacaacat 41065381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 12964412 - 12964483
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactactttt 332  Q
    |||||||||||  |||||||||||   | |||| | |||||||||||||||||| ||||||||| || |||||||    
T  12964412 gtttgatcattacacattcaaaat---tgttgactcaaactatccaaacaacattaactcataataattactttt 12964483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 274 - 453
Target Start/End: Original strand, 35536064 - 35536242
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| ||  |||||||||| |||||||| ||| |||| ||||||||  ||| | ||    
T  35536064 ttcaaaatcaattttgattcaaattatccaaacaacatcaactcataagaatcacttttaaacgagtgtatctaaacataa-ccaattcacgtcaaagtc 35536162  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    ||||||||||||||| |||||| |||||||||||||||| ||||| ||||||| ||||| ||||||||||||||||||||    
T  35536163 acttttaatcaaaattaattctctcaaactcaattctattaaaattaattttcatcaccgccataccaaacacacactaa 35536242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 271 - 451
Target Start/End: Complemental strand, 42850356 - 42850176
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||  ||||||||  ||||||||||||| ||||| |||||||  ||  |    
T  42850356 acattcaaaatcaattttgatgtaaaatatccaaacaacatcaactcataagaatcacttttaaggaagtgtatccaaacataaatcaattcacatccaa 42850257  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||| ||||||||||||  | ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  42850256 ctcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 42850176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 168 - 395
Target Start/End: Complemental strand, 291949 - 291730
Alignment:
Q  168 atcactacacattaaaaaatacagctttggcaaatgtgatataattgnnnnnnnnnnn----gacaaaatataagaaattctatatttaggggcgtttga 263  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||               || ||||||||||||||||||| |||||||| |||||     
T  291949 atcactacaggttaaaaaatacagctttggcaaatgtgatataattgtttttttttttttttgataaaatataagaaattctatgtttaggggtgtttgg 291850  T
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    |||||||||||||||||||||||||||||         |||||||||   |||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  291849 tcattttacattcaaaatcaattttgatt---------caaacaaca---actcataacaatcacttttaaacaagtgtatccaaacataaaccaattca 291762  T
Q  364 tctcatattcacttttaatcaaaatcaattct 395  Q
    ||||| | ||||||||||||||||||||||||    
T  291761 tctcaaactcacttttaatcaaaatcaattct 291730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 259 - 453
Target Start/End: Original strand, 47123363 - 47123557
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||||| ||| |||||  |||| ||||||||||||||  ||||||||||||| ||||| |||| ||  ||||||||  ||||||||||||| | ||| ||    
T  47123363 tttgataattatacatctaaaagcaattttgatttaatgtatccaaacaacaccaacttataagaatcacttttaacgaagtgtatccaaacaaaaatca 47123462  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||  ||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  47123463 attcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatttttgccaccgccataccaaacacacactaa 47123557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 259 - 452
Target Start/End: Original strand, 12468190 - 12468381
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||  ||||||||| ||||||||||||||||||| ||    
T  12468190 tttggtcattgtacattcaaaatcaattttgattcaaactatccaaacaa-atcaactcataaaaatcacttttaaaaaagtgtatccaaatataaatca 12468288  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    ||| |  ||| | |||||||||| ||||||||||| | ||||||||||||||||| ||||||||| |   | || |||||||||||||||||||    
T  12468289 atttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatc-aaatcaattcttcccgccgccataccaaacacacacta 12468381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 259 - 451
Target Start/End: Complemental strand, 43729026 - 43728835
Alignment:
Q  259 tttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacca 358  Q
    |||| |||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| ||  ||||||||| |||| |||||||| || || ||    
T  43729026 tttggtcatttaatattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaacat-aatca 43728928  T
Q  359 attcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||  ||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  || | | ||||||||||||||||    
T  43728927 attcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattctctccatcgctataccaaacacacact 43728835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 264 - 454
Target Start/End: Complemental strand, 35569346 - 35569156
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| || |  ||  ||||||||  ||||||||||||| ||||| |||||||    
T  35569346 tcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattca 35569247  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
      |   | |||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||  | || |||||||||||||||||||||    
T  35569246 cattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccataccaaacacacactaag 35569156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 258 - 451
Target Start/End: Original strand, 31223350 - 31223543
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    ||||| |||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||  |||| ||   ||||||||||||| ||||| |    
T  31223350 gtttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaacataaatc 31223449  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||  ||  | |||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||  |||| ||| ||||||||||||||    
T  31223450 aattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattctccccaccgccaaaccaaacacacact 31223543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 276 - 456
Target Start/End: Original strand, 26058235 - 26058415
Alignment:
Q  276 caaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcac 375  Q
    ||||||||||||| ||  || |||||||||||||||||| |||||  || ||||||||||  |||| ||||||| ||||| ||||| |  ||  ||||||    
T  26058235 caaaatcaattttaatccaatctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaattcac 26058334  T
Q  376 ttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaa 456  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  26058335 ttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacacacactaagaa 26058415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 274 - 456
Target Start/End: Original strand, 12247412 - 12247593
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||| ||  ||||||||||||||||||||||| || ||  |||| |  ||  | ||    
T  12247412 ttcaaaatcaattttgattcaaattctccaaacaacatcaactcataaaaatcacttttaaacaagtgtatccaaacat-aattaatttacatccaactc 12247510  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaa 456  Q
    |||||||| || |||||||||| | |||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||    
T  12247511 acttttaaccagaatcaattctcttaaactcaattctattaaaatcaattttcatcaccgctataccaaacacacactaagaa 12247593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 272 - 453
Target Start/End: Original strand, 13055988 - 13056168
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcat-ctcata 370  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||  ||||||||  ||| |||| |||| ||||| |||||||  |||| |    
T  13055988 cattcaaaatcaatttttattcaaactatccaaacaatatcaactcataaaaatcacttttaat-aagcgtattcaaacataaatcaattcacactca-a 13056085  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
     |||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  13056086 ctcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattatcgccaccgccataccaaacacacactaa 13056168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 274 - 451
Target Start/End: Original strand, 1199819 - 1199996
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| |||||||||||||||||||||  || || ||  |||| |||  ||||||||||||| ||||| |||||||  |   | ||    
T  1199819 ttcaaaatcaattttgattcaaactatccaaacaacatcaatccacaagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactc 1199918  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  1199919 acttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 1199996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 272 - 449
Target Start/End: Complemental strand, 11023465 - 11023289
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    |||| |||||||||||||||| |||||| |||||||| |||||||| ||| || |||||||||   | |||||||||| |||| | |||||| || | |     
T  11023465 catttaaaatcaattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattgaatgtatccaaacataatc-aattcacctaaaac 11023367  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  11023366 tcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaaacacaca 11023289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 271 - 451
Target Start/End: Complemental strand, 50977476 - 50977297
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||| ||| ||||||||||||||| ||| |||||||| ||  |||| |||  ||| ||||||||| ||||| |||||||   || |    
T  50977476 acattcaaaatcaatttttattcaaactatccaaacaatatctactcataaaaatcacttgtaat-aagcgtatccaaacataaaacaattcacaccaaa 50977378  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||    
T  50977377 ctcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattctcgccaccgccataccaaacacacact 50977297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 264 - 451
Target Start/End: Complemental strand, 20800421 - 20800234
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||| || |  ||  ||||||||  ||||||||||||| ||||| |||||||    
T  20800421 tcattatacattcaaaatcaatattgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattca 20800322  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
      |   | |||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||  | || ||||||||||||||||||    
T  20800321 cattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccataccaaacacacact 20800234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 274 - 445
Target Start/End: Complemental strand, 40229604 - 40229433
Alignment:
Q  274 ttcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattc 373  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| || ||  || | |||  ||||||||||||| ||||| ||||||| |||| | ||    
T  40229604 ttcaaaatcaattttgattcaaattatccaaacaacatcaactcagaagaatcacctgtaagaaagtgtatccaaacataaatcaattcacctcaaactc 40229505  T
Q  374 acttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaaca 445  Q
    |||||||| ||||||||||||   |||| |||||||||||||||||||||||| |||||  |||||||||||    
T  40229504 acttttaaccaaaatcaattccaacaaaatcaattctatcaaaatcaattttcatcaccgtcataccaaaca 40229433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 270 - 455
Target Start/End: Original strand, 10470578 - 10470762
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaatt-catctca 368  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||  |||| |    | ||||||||||| |||| | | || ||| |||    
T  10470578 tacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctgttaacgtgtatccaaacataatcaatttacat-tca 10470676  T
Q  369 tattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaaga 455  Q
     | |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||    
T  10470677 -actcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccctaccaaacacacactaaga 10470762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 258 - 451
Target Start/End: Original strand, 48510884 - 48511077
Alignment:
Q  258 gtttgatcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaacc 357  Q
    |||||||||||  ||| | |||||||||||||||  | ||||| ||||||||||||| |||||| ||  |||||||| |||||||||||||| ||||| |    
T  48510884 gtttgatcattacacacttaaaatcaattttgatacatactattcaaacaacatcaattcataagaatcacttttaagcaagtgtatccaaacataaatc 48510983  T
Q  358 aattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||  |   | |||||||||| ||||||||||| | ||||||||||||| ||||||||||||| ||| | || ||||||||||||||||||    
T  48510984 aattcacattcaactcacttttaaccaaaatcaattatctcaaactcaattcaatcaaaatcaattctcgccgccgccataccaaacacacact 48511077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 451
Target Start/End: Complemental strand, 7826491 - 7826311
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||||||| || |||||||||||||||||| |||||| ||  ||||||||   || ||| ||||| ||||| |||||||  |||      
T  7826491 acatttaaaatcaattttgattcaacctatccaaacaacatcaattcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaag 7826392  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
     |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||  |||| ||| ||||||||||||||    
T  7826391 ctcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattttctccaccgccaaaccaaacacacact 7826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 272 - 451
Target Start/End: Original strand, 6166100 - 6166278
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatat 371  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||| ||| ||  |||||||||  |||||||||||| |||| | ||||||  ||| |     
T  6166100 catttaaaatcaattttgattcaaactacccaaacaacatcaactcctaagaatcacttttaaatgagtgtatccaaacataatc-aattcagatcaaac 6166198  T
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||| ||| ||||||||||||| ||||| ||||||||||||||||||||| ||  |||| | ||||||||||||||||    
T  6166199 tcacttctaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgcgataccaaacacacact 6166278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 271 - 445
Target Start/End: Original strand, 45710038 - 45710211
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||| ||   |||||||| |||| |||| | ||||||  |   |    
T  45710038 acattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtattcaaacataatc-aattcacatacaa 45710136  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaaca 445  Q
     |||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||| | ||||||||||    
T  45710137 ctcacttttaatcaaaatcaattcactcaaactcaattctatcaaaatcaattatcgccaccgctataccaaaca 45710211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 448
Target Start/End: Original strand, 36205180 - 36205357
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||||||||||| ||||||  |||| ||| ||  ||||||||| |||| |||||||  | |||||||||||| ||  |    
T  36205180 acattcaaaatcaattttgattcaaactatccaagcaacattcactcgtaagaatcacttttaaataagtttatccaatcaaaaaccaattcatatctaa 36205279  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
      ||||||||||||||||||||||| |||||||||||||  | |||||||||| ||  ||||  ||||||||||||||    
T  36205280 cccacttttaatcaaaatcaattctctcaaactcaattccgttaaaatcaattctcaccaccgtcataccaaacacac 36205357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 273 - 449
Target Start/End: Original strand, 5410631 - 5410806
Alignment:
Q  273 attcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatatt 372  Q
    |||||||||||||| ||||| ||||||||||||||||||||| |||||| ||  ||||||||  | |||||| |||| ||||| ||||| |  ||  | |    
T  5410631 attcaaaatcaattatgattcaaactatccaaacaacatcaagtcataagaatcacttttaagta-gtgtattcaaacataaatcaatttacatccaact 5410729  T
Q  373 cacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||| | || ||| ||||||||||||    
T  5410730 cacttttaatcaaaatcaattctttcaaattcaattatatcaaaatcaattctcgccgccgccaaaccaaacacaca 5410806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 271 - 450
Target Start/End: Original strand, 6464597 - 6464775
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||| ||   ||||||||  ||| || || |||||||  | | |    
T  6464597 acattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtataaaaacat-aatcaattcacattaaa 6464695  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     |||||||||| |||||| || ||  |||||||||||| |||||||||||||| |||||||||| |||||||||| ||||    
T  6464696 ctcacttttaaccaaaatgaactcactcaaactcaattatatcaaaatcaattctcgtcaccactataccaaacaaacac 6464775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 297 - 452
Target Start/End: Complemental strand, 27801763 - 27801608
Alignment:
Q  297 ctatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctg 396  Q
    |||||||||||||||||| |||||  || ||||||||||  |||| ||||||| ||||| ||||| |  ||  | ||||||||||||||||||||||||     
T  27801763 ctatccaaacaacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctc 27801664  T
Q  397 tcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    | ||| ||||||||||||||||||||| ||| ||||  ||||||||||||||||||    
T  27801663 ttaaaatcaattctatcaaaatcaattctcgccaccgtcataccaaacacacacta 27801608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 270 - 457
Target Start/End: Original strand, 50406118 - 50406305
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcat 369  Q
    |||||| |||| ||||||||||| ||  ||||||||||||| ||||| |||| ||  | ||||||  ||||| ||||||| | ||| |||||||  ||      
T  50406118 tacatttaaaaacaattttgattcaatgtatccaaacaacaacaacttataagaatcatttttaacgaagtgcatccaaacaaaaatcaattcacatcta 50406217  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaaa 457  Q
    | |||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||| |||| | |||||||||||||||| |||||    
T  50406218 actcacttttaatcaaaatcaaatctttcaaactcaattttatcaaaatcaattctcgccaccgctataccaaacacacacttagaaa 50406305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 275 - 449
Target Start/End: Original strand, 25230000 - 25230173
Alignment:
Q  275 tcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattca 374  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||| ||  |||| ||   ||||||||||||| |||| | ||||||  |   | |||    
T  25230000 tcaaaatcaattttcattcaaactatccaaacaacatcaactaataagaatcacttctattaaagtgtatccaaacataatc-aattcacattcaactca 25230098  T
Q  375 cttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacaca 449  Q
    |||||||  |||||||||||| ||||||||| ||||||||||||||||| ||| ||||  |||||||||||||||    
T  25230099 cttttaactaaaatcaattctctcaaactcagttctatcaaaatcaattctcgccaccgtcataccaaacacaca 25230173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 423
Target Start/End: Original strand, 15884216 - 15884368
Alignment:
Q  272 cattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaaca-agtgtatccaaatataaaccaattcatctcata 370  Q
    ||||||||||||||||||||  |||||||||||||||||| || | |||| ||  |||||| |    | |||||||||| ||||| |||||||  ||  |    
T  15884216 cattcaaaatcaattttgatccaaactatccaaacaacatgaatttataaaaatcactttttactttattgtatccaaacataaatcaattcacatccaa 15884315  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
     |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  15884316 ctcacttttaaccaaaatcaattctgtcaaactcaactctatcaaaatcaatt 15884368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 271 - 408
Target Start/End: Complemental strand, 4369939 - 4369803
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||| ||  ||||||||   || ||| ||||| ||||| |||||||  ||| |    
T  4369939 acatttaaaatcaattttgattcaacctatccaaacaacatcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatca-a 4369841  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaatt 408  Q
     |||||||||| ||||||||||||| ||||| ||||||    
T  4369840 ctcacttttaaccaaaatcaattctctcaaaatcaatt 4369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 451
Target Start/End: Original strand, 34718452 - 34718620
Alignment:
Q  283 aattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaat 382  Q
    |||||| ||| ||| ||||||||||||   || |||||| ||  ||||||  |||||||||| |||| ||||| ||||| || ||| | ||||||||||     
T  34718452 aattttaattcaaagtatccaaacaactataattcataagaatcacttttgtacaagtgtattcaaacataaatcaatttatatcaaactcacttttaac 34718551  T
Q  383 caaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    |||||| |||| | |||||||||||||||||||||||||||||   ||||  || ||||||||||||||    
T  34718552 caaaattaattatctcaaactcaattctatcaaaatcaattttttccaccgtcaaaccaaacacacact 34718620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 273 - 453
Target Start/End: Original strand, 13931614 - 13931792
Alignment:
Q  273 attcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatatt 372  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||| ||  |  |||||   ||| |||||||| || || |||||||  ||| | |    
T  13931614 attcaaaatcaattttgattcaaactatccaaacaacatcaacttgtaagaatcatgtttaagtgagtatatccaaacat-aatcaattcacatcaaact 13931712  T
Q  373 cacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    || |||||| ||||||||||| |   ||||||||||||||||||||||| |  |  |||| ||||||||||||||||||||    
T  13931713 catttttaaacaaaatcaatttttggaaactcaattctatcaaaatcaa-tcccaccaccgccataccaaacacacactaa 13931792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 31933716 - 31933766
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataa 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  31933716 acattcaaaatcaattttgatgtaaaatatccaaacaacatcaactcataa 31933766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 447
Target Start/End: Original strand, 9447533 - 9447696
Alignment:
Q  282 caattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcacttttaa 381  Q
    ||||||| ||| ||||||||||||||||||||||||  || ||  |||||||||  ||| |||| ||| |||| || |||||  ||| | ||||||||||    
T  9447533 caattttaattcaaactatccaaacaacatcaactcgaaagaatcacttttaaatgagtatatctaaacataatcc-attcacatcaaactcacttttaa 9447631  T
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacaca 447  Q
     | ||| || |||| ||||| |||||| ||| |||||||||| || ||||| ||||||||||||||    
T  9447632 -ccaaaccatttctctcaaattcaattttattaaaatcaattctcttcaccgccataccaaacaca 9447696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 459
Target Start/End: Original strand, 29441274 - 29441361
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaagaaatt 459  Q
    |||||| ||| ||||||||||||  ||||||||||||||||||||||||||| |  ||||| |   | ||||||||||||||||||||    
T  29441274 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctactcaccgcagaatcaaacacacactaagaaatt 29441361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 451
Target Start/End: Original strand, 25061221 - 25061395
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcact 376  Q
    |||||||||||||||| ||| |||||||||| |||||| | |||| ||  |||||||    |  ||||||||| ||||| ||||| || |   | |||||    
T  25061221 aaaatcaattttgattcaaattatccaaacatcatcaattgataagaatcacttttatgttaaggtatccaaacataaatcaatttatgttcaactcact 25061320  T
Q  377 tttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||| ||||||||||||   |||| |||||| || ||||||||||||| |||||| |   ||||||||||||||    
T  25061321 tttaaccaaaatcaattcaaccaaaatcaattttaacaaaatcaatttttgtcaccgcagaaccaaacacacact 25061395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 15576544 - 15576604
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacc 432  Q
    ||||||||||| |||||||||||| | ||||||||||  || |||||||||||||||||||    
T  15576544 tcacttttaattaaaatcaattctcttaaactcaatttaattaaaatcaattttcgtcacc 15576604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 16556295 - 16556362
Alignment:
Q  342 tatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattct 410  Q
    |||||||| ||||| || ||||||||| |||||||||||| ||||||||||| ||||||| ||||||||    
T  16556295 tatccaaacataaatcacttcatctca-attcacttttaaccaaaatcaattatgtcaaattcaattct 16556362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 451
Target Start/End: Complemental strand, 7765319 - 7765241
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||||| ||| |||||||| ||| ||| ||||||||||||||||||||| |||||||| |   ||||||||||||||    
T  7765319 tcacttttattcataatcaattatgtaaaa-tcaattctatcaaaatcaattctcgtcaccgcataaccaaacacacact 7765241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 454
Target Start/End: Original strand, 13344863 - 13344944
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    |||||||||| |||||||||||||  |||| ||||||| ||||||||||||| || ||||| ||  ||||||||||| |||||    
T  13344863 tcacttttaaccaaaatcaattcta-caaaatcaattcaatcaaaatcaattatcttcaccgcccaaccaaacacacgctaag 13344944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 380
Target Start/End: Complemental strand, 11051447 - 11051339
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||| ||| ||| | ||||||    |||||| |||| ||||| |||||||  ||| |    
T  11051447 acattcaaaatcaatttttattcaaactatccaaacaacat-aactcttaagaaccatttttaagtgtgtgtattcaaacataaatcaattcacatcaaa 11051349  T
Q  371 ttcactttta 380  Q
     |||||||||    
T  11051348 ctcactttta 11051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 453
Target Start/End: Original strand, 40352481 - 40352561
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||||||| ||||||||||||   |||| ||||||||||||||||||||| || ||||| |   ||||||||||||||||    
T  40352481 tcacttttaaccaaaatcaattcca-caaaatcaattctatcaaaatcaattctcctcaccgcacaaccaaacacacactaa 40352561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 43134540 - 43134597
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtc 429  Q
    |||||||||| ||||||||||||| | ||||||||||||||| |||| |||| |||||    
T  43134540 tcacttttaaccaaaatcaattctcttaaactcaattctatccaaataaattctcgtc 43134597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 46033251 - 46033210
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  46033251 tacattcaaaatcaattttgataaaaactatccaaacaacat 46033210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 451
Target Start/End: Complemental strand, 291744 - 291704
Alignment:
Q  411 atcaaaatcaattttcgtcaccaccataccaaacacacact 451  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  291744 atcaaaatcaattctcgccaccaccataccaaacacacact 291704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 423
Target Start/End: Complemental strand, 49243014 - 49242967
Alignment:
Q  376 ttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  49243014 ttttaaccaaaatcaattctctcaaactcaattatatcaaaattaatt 49242967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 6061246 - 6061308
Alignment:
Q  386 aatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacac 448  Q
    |||||||| | ||||| ||||||||||||||||||||||||  ||||  || |||||||||||    
T  6061246 aatcaattatctcaaattcaattctatcaaaatcaattttcaccaccgtcaaaccaaacacac 6061308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 4347064 - 4347116
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatttt 425  Q
    |||||||||| |||||||||||||  |||| ||||||||| |||||||||||||    
T  4347064 tcacttttaaccaaaatcaattct-acaaaatcaattctaccaaaatcaatttt 4347116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 36118120 - 36118157
Alignment:
Q  277 aaaatcaattttgatttaaactatccaaacaacatcaa 314  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  36118120 aaaatcaattttggtttaaactatccaaacaatatcaa 36118157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 41512729 - 41512770
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||||||||||||||  |||| |||||||||||||    
T  41512729 tacattcaaaatcaattttgatcaaaacaatccaaacaacat 41512770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 41512823 - 41512864
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  41512823 tcaaaatcaattctgtcagaatcaattctatcagaatcaatt 41512864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 42137211 - 42137170
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  42137211 tacattcaaaagcaattttgatcaaaactatccaaacaacat 42137170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 30557624 - 30557683
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcacc 432  Q
    |||||||||| |||||||||||||  || | ||||||||||||||||||||| || |||||    
T  30557624 tcacttttaaccaaaatcaattcta-cagaatcaattctatcaaaatcaattctcctcacc 30557683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 40821814 - 40821858
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaac 315  Q
    ||||||||| |||||||||||| ||| |||||||| |||||||||    
T  40821814 acattcaaactcaattttgattcaaattatccaaataacatcaac 40821858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 46033169 - 46033129
Alignment:
Q  385 aaatcaattctgtcaaactcaattctatcaaaatcaatttt 425  Q
    ||||||||||| ||||| |||||||||||| ||||||||||    
T  46033169 aaatcaattctttcaaaatcaattctatcagaatcaatttt 46033129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 276 - 450
Target Start/End: Complemental strand, 2399 - 2225
Alignment:
Q  276 caaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatattcac 375  Q
    ||||||||||||||||| |||||||| ||||||| ||||||  ||| ||| |||||||||||||||| |||||| ||||| ||||||| |||| | ||||    
T  2399 caaaatcaattttgattcaaactatctaaacaacgtcaacttgtaaaaaccacttttaaacaagtgtgtccaaacataaatcaattcacctcaaactcac 2300  T
Q  376 ttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||    
T  2299 ttttaaccaaaatcaattatgtcaaactcaattctgtcaaaatcaattttcgccaccgccataccaaacagacac 2225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 264 - 452
Target Start/End: Original strand, 9069 - 9256
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||  ||||| ||   |||||||||||| ||| || ||||||    
T  9069 tcattatacattcaaaatcaattttaattcaaactatccaaacaacatctactcataagaatcactttcaagtgagtgtatccaaacatatac-aattca 9167  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    | ||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||| |||||||||||||| ||||    
T  9168 tatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacacatacta 9256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 273 - 453
Target Start/End: Complemental strand, 2161 - 1981
Alignment:
Q  273 attcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcatatt 372  Q
    |||||||||||||||||| |||||||||||||||||||||||  ||| | ||  ||||||| |  |||| ||||||| ||||| |||||||| ||| | |    
T  2161 attcaaaatcaattttgacttaaactatccaaacaacatcaagccatgataatcacttttatatgagtgcatccaaacataaatcaattcatatcaaact 2062  T
Q  373 cacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    || ||| || ||||||||||||| ||||||||||||||||||||||||||| ||| |||| |||  |||||||||||||||    
T  2061 cattttgaaccaaaatcaattctttcaaactcaattctatcaaaatcaattatcgacaccgccaatccaaacacacactaa 1981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 454
Target Start/End: Original strand, 253086 - 253276
Alignment:
Q  264 tcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattca 363  Q
    ||||| || |||||||||||||||||||| || ||||||||||||||| ||||||||| ||  ||||||||   |  ||||||||| ||||| |||||||    
T  253086 tcattatatattcaaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaaggtatccaaacataaatcaattca 253185  T
Q  364 tctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaag 454  Q
    | ||  | |||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||  | || ||  |||||||||||||||||    
T  253186 tatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccgccgcccaaccaaacacacactaag 253276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 271 - 450
Target Start/End: Complemental strand, 29258 - 29080
Alignment:
Q  271 acattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcata 370  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||  |||| ||   ||||||||||||| |||| | ||||||  |   |    
T  29258 acattcaaaatcaattttgattcaaactatccaaacaacatcaattcataagaataacttctattaaagtgtatccaaacataatc-aattcacattcaa 29160  T
Q  371 ttcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacac 450  Q
     |||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |   |||||||| |||||||||||||    
T  29159 ctcacttttaaccaaaatcaattctttcaaacttaattctatcaaaatcaattattaccaccaccaaaccaaacacacac 29080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 372 - 453
Target Start/End: Complemental strand, 5865 - 5784
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacactaa 453  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||   ||||||||||||||||||||||||    
T  5865 tcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattctccctaccaccataccaaacacacactaa 5784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 5967 - 5918
Alignment:
Q  271 acattcaaaatcaattttgatt-----taaactatccaaacaacatcaac 315  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||    
T  5967 acattcaaaatcaattttgattcaaattaaactatccaaacaacatcaac 5918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 427
Target Start/End: Original strand, 46727 - 46883
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaactacttttaaacaagtgtatccaaatataaaccaattcatctcat 369  Q
    ||||| |||||||||||||||||| ||||||||||||||||| || | |||| ||  |||||||    | | |||||||| ||||||||||| |  |||     
T  46727 tacatccaaaatcaattttgatttgaactatccaaacaacatgaattgataaaaatcacttttactttaatatatccaaacataaaccaattaagttca- 46825  T
Q  370 attcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcg 427  Q
    | |||||||||  ||||||||||||| ||||| |||||| | ||||||||||||||||    
T  46826 actcacttttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaattttcg 46883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 452
Target Start/End: Complemental strand, 15292 - 15213
Alignment:
Q  372 tcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattttcgtcaccaccataccaaacacacacta 452  Q
    |||||||||| ||||||||||| || |||| |||||||||||||||||||||||||||||| |   |||||||||||||||    
T  15292 tcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaattttcgtcaccgcacaaccaaacacacacta 15213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 118482 - 118394
Alignment:
Q  335 acaagtgtatccaaatataaaccaattcatctcatattcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    ||||||||||||||| ||||| ||||| |  ||| | ||||||||||  |||||| ||||| ||||||||||||| |||||||||||||    
T  118482 acaagtgtatccaaacataaatcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaattcgatcaaaatcaatt 118394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 9295 - 9254
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    |||||| |||||||||||||||  ||||||||||||||||||    
T  9295 tacatttaaaatcaattttgatcaaaactatccaaacaacat 9254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 423
Target Start/End: Original strand, 32058 - 32095
Alignment:
Q  386 aatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  32058 aatcaattctatcaaaatcaattctatcaaaatcaatt 32095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 32487 - 32446
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  32487 tcaaaatcaattctgtcacaatcaattctatcataatcaatt 32446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 32582 - 32541
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  32582 tacattcaaaagcaattttgataaaaactatccaaacaacat 32541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 38384 - 38425
Alignment:
Q  382 tcaaaatcaattctgtcaaactcaattctatcaaaatcaatt 423  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  38384 tcaaaatcaattctgtcaaaatcaattctattagaatcaatt 38425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 301786 - 301745
Alignment:
Q  270 tacattcaaaatcaattttgatttaaactatccaaacaacat 311  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  301786 tacattcaaaaacaattttgatcaaaactatccaaacaacat 301745  T

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