View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16487_high_4 (Length: 239)
Name: NF16487_high_4
Description: NF16487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16487_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 6575918 - 6576121
Alignment:
| Q |
16 |
gatatgattcctgtgtgggtctacccaactttactagaaacaatattgtaagtgagttgattcggctttaatacctacagtcttgaactggtggggtttt |
115 |
Q |
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| T |
6575918 |
gatatgattcctgtgtgggtctacccaactttactagaaacaatattgtatgtgagttgattcggctttaatacctacagtcttgaactggtggggtttt |
6576017 |
T |
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| Q |
116 |
gagttaactcgaaagatcgacaactattatagccacactttcattgtatatgtagtcaatggcatataatggacgacccccacaatgcagcgggtagagg |
215 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
6576018 |
gagttaactcgaaagttcgacaactattatagccacactttcattgtctatgtagtcaatggcatataatggacgacccccacaatacagcgggtagagg |
6576117 |
T |
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| Q |
216 |
tatg |
219 |
Q |
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|||| |
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| T |
6576118 |
tatg |
6576121 |
T |
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