View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16495_high_11 (Length: 291)

Name: NF16495_high_11
Description: NF16495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16495_high_11
NF16495_high_11
[»] chr4 (59 HSPs)
chr4 (4-291)||(3700223-3700511)
chr4 (4-160)||(25483325-25483490)
chr4 (8-137)||(54343014-54343145)
chr4 (4-163)||(1731649-1731817)
chr4 (4-159)||(36608663-36608827)
chr4 (4-152)||(54017597-54017754)
chr4 (6-159)||(10245910-10246071)
chr4 (4-159)||(22183266-22183430)
chr4 (4-159)||(50002416-50002580)
chr4 (4-156)||(36629230-36629391)
chr4 (4-159)||(36572009-36572173)
chr4 (8-156)||(2740693-2740848)
chr4 (4-160)||(4390103-4390268)
chr4 (32-160)||(4955347-4955484)
chr4 (7-159)||(22027966-22028127)
chr4 (13-156)||(3244462-3244614)
chr4 (77-159)||(3341118-3341201)
chr4 (4-159)||(39404388-39404552)
chr4 (77-159)||(52884877-52884960)
chr4 (4-154)||(3340802-3340961)
chr4 (4-146)||(55933126-55933277)
chr4 (4-137)||(44620365-44620507)
chr4 (4-161)||(50459709-50459875)
chr4 (4-156)||(39792862-39793023)
chr4 (84-159)||(45489421-45489497)
chr4 (13-156)||(52884688-52884841)
chr4 (77-156)||(54741261-54741341)
chr4 (17-79)||(15841383-15841445)
chr4 (77-157)||(41707547-41707628)
chr4 (6-151)||(49302902-49303058)
chr4 (4-137)||(50630757-50630899)
chr4 (77-156)||(10246340-10246420)
chr4 (40-160)||(34646687-34646816)
chr4 (80-159)||(49076534-49076614)
chr4 (4-79)||(23817683-23817758)
chr4 (77-155)||(44620654-44620733)
chr4 (7-82)||(54936272-54936346)
chr4 (4-146)||(39404021-39404172)
chr4 (4-146)||(41370360-41370511)
chr4 (4-66)||(43174233-43174295)
chr4 (4-134)||(44621017-44621156)
chr4 (77-134)||(54108928-54108986)
chr4 (77-156)||(28034222-28034302)
chr4 (7-79)||(32941128-32941200)
chr4 (77-136)||(54017785-54017845)
chr4 (31-134)||(45496820-45496932)
chr4 (50-156)||(2741064-2741179)
chr4 (4-82)||(18932751-18932829)
chr4 (7-137)||(20825848-20825987)
chr4 (77-146)||(49880163-49880233)
chr4 (40-159)||(16888854-16888983)
chr4 (36-95)||(41707275-41707334)
chr4 (98-137)||(50788088-50788127)
chr4 (98-164)||(19504690-19504756)
chr4 (84-137)||(44620308-44620362)
chr4 (77-137)||(20826229-20826290)
chr4 (77-160)||(11348411-11348495)
chr4 (114-162)||(11706642-11706690)
chr4 (81-159)||(43174496-43174576)
[»] chr7 (58 HSPs)
chr7 (8-159)||(30244260-30244420)
chr7 (13-159)||(7517570-7517725)
chr7 (4-159)||(1085620-1085784)
chr7 (13-159)||(45434626-45434781)
chr7 (8-159)||(30245067-30245223)
chr7 (31-159)||(7554015-7554152)
chr7 (75-159)||(30255329-30255414)
chr7 (4-160)||(34218038-34218203)
chr7 (4-159)||(23381-23545)
chr7 (50-159)||(22566712-22566830)
chr7 (75-159)||(30245484-30245569)
chr7 (13-161)||(45754704-45754860)
chr7 (100-159)||(41910703-41910762)
chr7 (4-137)||(6054572-6054714)
chr7 (4-137)||(11845203-11845345)
chr7 (75-159)||(30244691-30244776)
chr7 (165-257)||(3946894-3946986)
chr7 (77-160)||(40094859-40094943)
chr7 (8-159)||(22567047-22567206)
chr7 (77-159)||(24177425-24177508)
chr7 (4-159)||(45433231-45433395)
chr7 (4-137)||(14681522-14681662)
chr7 (21-161)||(24838722-24838872)
chr7 (82-158)||(36109007-36109084)
chr7 (4-149)||(37533368-37533522)
chr7 (13-137)||(19122744-19122876)
chr7 (77-160)||(36534869-36534953)
chr7 (77-159)||(47129085-47129168)
chr7 (40-146)||(29157568-29157683)
chr7 (8-158)||(36939741-36939900)
chr7 (77-146)||(37533095-37533165)
chr7 (77-154)||(40230376-40230454)
chr7 (4-57)||(30244453-30244506)
chr7 (8-79)||(30253571-30253638)
chr7 (40-159)||(1085288-1085417)
chr7 (81-160)||(43241484-43241564)
chr7 (77-159)||(118386-118469)
chr7 (77-159)||(16569186-16569269)
chr7 (77-159)||(16596393-16596476)
chr7 (77-159)||(36622950-36623033)
chr7 (7-57)||(30253671-30253721)
chr7 (41-82)||(23569043-23569084)
chr7 (4-57)||(30245256-30245309)
chr7 (99-156)||(40094502-40094559)
chr7 (4-77)||(47129450-47129523)
chr7 (77-156)||(8128526-8128606)
chr7 (95-159)||(9901635-9901698)
chr7 (77-156)||(28301628-28301708)
chr7 (4-80)||(37167859-37167935)
chr7 (16-159)||(41854625-41854776)
chr7 (85-136)||(44361557-44361608)
chr7 (4-70)||(37532755-37532821)
chr7 (9-50)||(7517765-7517806)
chr7 (9-50)||(7518031-7518072)
chr7 (33-78)||(37345998-37346043)
chr7 (10-75)||(45755010-45755075)
chr7 (31-79)||(2512582-2512630)
chr7 (81-160)||(20599303-20599383)
[»] chr1 (46 HSPs)
chr1 (4-159)||(26661526-26661690)
chr1 (4-160)||(31767165-31767330)
chr1 (4-162)||(41156978-41157145)
chr1 (13-159)||(37556101-37556256)
chr1 (2-159)||(34364497-34364663)
chr1 (4-156)||(22077499-22077660)
chr1 (39-157)||(17294569-17294696)
chr1 (13-158)||(37555721-37555874)
chr1 (4-157)||(41157367-41157529)
chr1 (4-146)||(44290828-44290980)
chr1 (4-146)||(44290462-44290613)
chr1 (77-161)||(41184510-41184595)
chr1 (4-153)||(45084378-45084530)
chr1 (4-159)||(41142362-41142527)
chr1 (77-147)||(50052108-50052179)
chr1 (2-156)||(24600316-24600479)
chr1 (4-134)||(48588492-48588631)
chr1 (4-137)||(3537603-3537745)
chr1 (4-137)||(3875335-3875477)
chr1 (2-159)||(34364915-34365081)
chr1 (8-158)||(40082398-40082556)
chr1 (13-157)||(9955899-9956054)
chr1 (4-159)||(37850604-37850768)
chr1 (77-146)||(3537232-3537302)
chr1 (21-159)||(26661919-26662066)
chr1 (4-137)||(14318879-14319021)
chr1 (4-137)||(45493978-45494124)
chr1 (77-160)||(21378126-21378210)
chr1 (4-160)||(29798188-29798353)
chr1 (4-159)||(11977270-11977434)
chr1 (4-159)||(34649428-34649592)
chr1 (40-146)||(3550723-3550838)
chr1 (32-146)||(32594748-32594871)
chr1 (4-146)||(41759486-41759637)
chr1 (81-137)||(5528843-5528900)
chr1 (102-159)||(35154150-35154207)
chr1 (80-143)||(5575110-5575174)
chr1 (4-79)||(22077114-22077189)
chr1 (6-77)||(22793360-22793431)
chr1 (3-157)||(66475-66638)
chr1 (17-159)||(39066217-39066368)
chr1 (97-156)||(4878796-4878855)
chr1 (7-82)||(32168705-32168780)
chr1 (15-146)||(38804370-38804510)
chr1 (17-79)||(47380184-47380246)
chr1 (77-157)||(5320050-5320131)
[»] chr8 (59 HSPs)
chr8 (7-157)||(5420643-5420802)
chr8 (4-160)||(3038294-3038459)
chr8 (4-159)||(9309345-9309508)
chr8 (77-159)||(147441-147524)
chr8 (2-137)||(18371663-18371802)
chr8 (2-146)||(3670063-3670216)
chr8 (8-159)||(34834866-34835026)
chr8 (23-137)||(70297-70420)
chr8 (8-146)||(3669690-3669837)
chr8 (73-137)||(25561725-25561790)
chr8 (13-154)||(45122070-45122220)
chr8 (16-159)||(147819-147962)
chr8 (4-159)||(6876866-6877031)
chr8 (4-136)||(20870577-20870718)
chr8 (77-160)||(25561901-25561985)
chr8 (2-137)||(9482606-9482750)
chr8 (7-146)||(30441084-30441236)
chr8 (2-160)||(30359260-30359427)
chr8 (4-137)||(34835221-34835363)
chr8 (7-132)||(45121663-45121797)
chr8 (23-159)||(33113390-33113535)
chr8 (4-80)||(41129066-41129142)
chr8 (77-160)||(43274864-43274948)
chr8 (3-146)||(1013874-1014026)
chr8 (79-137)||(1514002-1514061)
chr8 (4-79)||(5915946-5916021)
chr8 (81-159)||(8794101-8794180)
chr8 (77-159)||(8918849-8918932)
chr8 (9-156)||(20995425-20995566)
chr8 (8-135)||(45122638-45122774)
chr8 (2-124)||(9483189-9483320)
chr8 (78-151)||(18372785-18372859)
chr8 (4-146)||(40518585-40518736)
chr8 (77-159)||(45122996-45123077)
chr8 (77-137)||(41416256-41416317)
chr8 (77-156)||(9608738-9608818)
chr8 (3-159)||(30359599-30359764)
chr8 (77-156)||(41972151-41972231)
chr8 (77-156)||(9308970-9309052)
chr8 (81-151)||(45121999-45122070)
chr8 (78-151)||(18372342-18372416)
chr8 (4-82)||(40518147-40518225)
chr8 (97-158)||(32640633-32640694)
chr8 (6-159)||(37544496-37544658)
chr8 (77-156)||(4154751-4154831)
chr8 (7-82)||(9507858-9507933)
chr8 (2-137)||(18371996-18372140)
chr8 (85-136)||(20130462-20130513)
chr8 (7-82)||(40579276-40579351)
chr8 (100-146)||(6731907-6731953)
chr8 (77-146)||(40579591-40579661)
chr8 (26-79)||(5274854-5274907)
chr8 (16-73)||(12283957-12284014)
chr8 (81-146)||(18372692-18372757)
chr8 (81-137)||(18373020-18373077)
chr8 (79-146)||(1014332-1014400)
chr8 (4-76)||(8919148-8919220)
chr8 (4-79)||(9620682-9620755)
chr8 (46-82)||(12156704-12156740)
[»] chr3 (59 HSPs)
chr3 (6-159)||(31190007-31190161)
chr3 (8-137)||(39934963-39935101)
chr3 (4-157)||(54017820-54017982)
chr3 (4-159)||(25739429-25739593)
chr3 (4-146)||(37726507-37726650)
chr3 (4-159)||(42342392-42342556)
chr3 (4-161)||(15772842-15773008)
chr3 (4-161)||(35946510-35946676)
chr3 (6-159)||(15773182-15773346)
chr3 (4-160)||(32589693-32589857)
chr3 (4-156)||(33803256-33803417)
chr3 (37-156)||(8327897-8328025)
chr3 (4-159)||(37990643-37990807)
chr3 (4-159)||(37990981-37991145)
chr3 (4-159)||(43346795-43346959)
chr3 (77-161)||(29644987-29645072)
chr3 (17-160)||(52634665-52634816)
chr3 (4-160)||(12114566-12114731)
chr3 (4-159)||(54018202-54018366)
chr3 (7-136)||(22304582-22304720)
chr3 (4-159)||(53117979-53118142)
chr3 (4-159)||(32462904-32463069)
chr3 (77-159)||(29644666-29644749)
chr3 (8-157)||(45395661-45395819)
chr3 (95-160)||(53577353-53577418)
chr3 (39-159)||(11661525-11661639)
chr3 (13-160)||(39914241-39914397)
chr3 (4-159)||(42342094-42342258)
chr3 (4-82)||(22303663-22303741)
chr3 (4-82)||(41359769-41359847)
chr3 (77-146)||(51886564-51886634)
chr3 (98-159)||(43346640-43346701)
chr3 (46-82)||(46546371-46546407)
chr3 (13-159)||(11661941-11662096)
chr3 (81-159)||(25755384-25755463)
chr3 (8-82)||(22303963-22304037)
chr3 (26-156)||(47964544-47964683)
chr3 (81-146)||(50612541-50612607)
chr3 (77-137)||(42584907-42584968)
chr3 (77-161)||(49336772-49336857)
chr3 (81-156)||(21832432-21832508)
chr3 (98-146)||(22304249-22304297)
chr3 (31-79)||(39336001-39336049)
chr3 (81-159)||(45901703-45901783)
chr3 (26-77)||(25317239-25317290)
chr3 (117-167)||(1634441-1634491)
chr3 (4-82)||(3135458-3135536)
chr3 (77-146)||(39389073-39389143)
chr3 (77-137)||(3135158-3135219)
chr3 (98-159)||(3135568-3135629)
chr3 (81-153)||(7767403-7767476)
chr3 (4-73)||(50612451-50612520)
chr3 (77-156)||(9240142-9240222)
chr3 (117-157)||(12747878-12747918)
chr3 (50-82)||(17731954-17731986)
chr3 (50-82)||(19033185-19033217)
chr3 (85-159)||(32462651-32462727)
chr3 (77-156)||(33175749-33175829)
chr3 (50-82)||(54017598-54017630)
[»] chr2 (50 HSPs)
chr2 (5-152)||(7598606-7598754)
chr2 (6-146)||(36178611-36178760)
chr2 (23-164)||(28254262-28254410)
chr2 (6-159)||(15880253-15880415)
chr2 (4-159)||(6421375-6421539)
chr2 (4-146)||(37106191-37106342)
chr2 (4-156)||(962591-962752)
chr2 (4-160)||(38796622-38796789)
chr2 (4-146)||(5542629-5542780)
chr2 (4-146)||(5543002-5543153)
chr2 (47-159)||(31468797-31468914)
chr2 (80-159)||(38796306-38796386)
chr2 (7-146)||(14745674-14745822)
chr2 (77-159)||(31899511-31899594)
chr2 (4-78)||(6421811-6421885)
chr2 (6-159)||(15511501-15511661)
chr2 (26-157)||(30313170-30313309)
chr2 (4-146)||(37105927-37106078)
chr2 (4-146)||(41283479-41283630)
chr2 (98-159)||(36785670-36785731)
chr2 (4-159)||(40733873-40734036)
chr2 (2-82)||(3672777-3672857)
chr2 (4-154)||(35580728-35580886)
chr2 (4-156)||(42514642-42514803)
chr2 (81-159)||(16542439-16542518)
chr2 (7-162)||(36005887-36006050)
chr2 (8-159)||(40733507-40733667)
chr2 (98-159)||(29676893-29676954)
chr2 (26-79)||(29873563-29873616)
chr2 (81-152)||(1769889-1769961)
chr2 (4-159)||(6712966-6713131)
chr2 (4-152)||(7598225-7598382)
chr2 (77-156)||(28531399-28531479)
chr2 (77-156)||(37632682-37632762)
chr2 (4-79)||(3673147-3673222)
chr2 (7-82)||(6422186-6422261)
chr2 (101-159)||(6421294-6421352)
chr2 (4-70)||(6421714-6421780)
chr2 (4-82)||(23346312-23346390)
chr2 (77-161)||(31259701-31259789)
chr2 (13-161)||(33731634-33731793)
chr2 (76-137)||(40163457-40163519)
chr2 (35-156)||(33561486-33561616)
chr2 (4-156)||(40679633-40679794)
chr2 (50-137)||(14745344-14745440)
chr2 (4-131)||(36178175-36178311)
chr2 (85-162)||(5367442-5367520)
chr2 (114-159)||(3673075-3673120)
chr2 (50-82)||(37895111-37895143)
chr2 (33-77)||(41678401-41678445)
[»] chr5 (42 HSPs)
chr5 (4-169)||(36492221-36492395)
chr5 (4-162)||(15370086-15370253)
chr5 (8-146)||(32487397-32487543)
chr5 (4-157)||(3295349-3295509)
chr5 (14-160)||(300948-301095)
chr5 (4-159)||(40296319-40296483)
chr5 (15-137)||(41170646-41170777)
chr5 (4-159)||(25327925-25328089)
chr5 (13-156)||(26074159-26074311)
chr5 (4-146)||(6500454-6500604)
chr5 (13-159)||(26074602-26074757)
chr5 (1-146)||(18603121-18603275)
chr5 (77-161)||(26075247-26075332)
chr5 (23-154)||(35150002-35150141)
chr5 (48-159)||(11417025-11417143)
chr5 (77-159)||(6224186-6224269)
chr5 (9-156)||(13415769-13415925)
chr5 (50-159)||(299479-299597)
chr5 (8-137)||(38427560-38427697)
chr5 (2-82)||(624272-624352)
chr5 (4-156)||(1028521-1028682)
chr5 (85-160)||(12662745-12662821)
chr5 (4-159)||(42405602-42405764)
chr5 (77-159)||(26074867-26074950)
chr5 (79-159)||(35914839-35914920)
chr5 (7-159)||(3295022-3295184)
chr5 (4-146)||(6500826-6500976)
chr5 (4-146)||(27502040-27502191)
chr5 (3-137)||(34753028-34753171)
chr5 (8-156)||(36568577-36568732)
chr5 (81-157)||(42508604-42508681)
chr5 (77-156)||(41632775-41632855)
chr5 (16-75)||(623901-623960)
chr5 (2-76)||(26590912-26590986)
chr5 (110-159)||(35150737-35150786)
chr5 (110-159)||(35151028-35151077)
chr5 (2-137)||(33747783-33747927)
chr5 (4-82)||(15370478-15370556)
chr5 (32-82)||(36522269-36522319)
chr5 (77-137)||(9498739-9498800)
chr5 (81-157)||(31509615-31509692)
chr5 (31-79)||(36527126-36527174)
[»] chr6 (36 HSPs)
chr6 (15-159)||(1950200-1950353)
chr6 (8-160)||(2579880-2580041)
chr6 (8-156)||(10074371-10074528)
chr6 (4-146)||(29518506-29518657)
chr6 (4-146)||(29518923-29519074)
chr6 (4-146)||(32741182-32741333)
chr6 (4-159)||(2578447-2578610)
chr6 (8-161)||(2377742-2377904)
chr6 (13-146)||(3409262-3409404)
chr6 (4-137)||(5832031-5832172)
chr6 (4-159)||(16454897-16455061)
chr6 (4-146)||(2378129-2378280)
chr6 (4-146)||(35210207-35210358)
chr6 (4-146)||(14748346-14748493)
chr6 (81-160)||(9062438-9062518)
chr6 (13-160)||(16107667-16107823)
chr6 (4-146)||(1846751-1846902)
chr6 (40-146)||(26544052-26544167)
chr6 (81-161)||(593798-593879)
chr6 (40-137)||(3058238-3058344)
chr6 (4-156)||(10073620-10073779)
chr6 (4-156)||(10911558-10911720)
chr6 (4-156)||(10073995-10074156)
chr6 (49-137)||(32460629-32460726)
chr6 (13-80)||(12085047-12085114)
chr6 (77-159)||(16108053-16108136)
chr6 (4-159)||(16454565-16454729)
chr6 (4-146)||(3409663-3409814)
chr6 (4-74)||(12071695-12071765)
chr6 (4-79)||(2843634-2843709)
chr6 (23-137)||(3415470-3415593)
chr6 (98-159)||(2579212-2579273)
chr6 (13-137)||(1127372-1127505)
chr6 (32-156)||(12092514-12092647)
chr6 (77-159)||(6999881-6999964)
chr6 (2-79)||(2579494-2579571)
[»] scaffold0702 (2 HSPs)
scaffold0702 (8-161)||(522-684)
scaffold0702 (80-146)||(230-297)
[»] scaffold0391 (2 HSPs)
scaffold0391 (2-159)||(1108-1274)
scaffold0391 (97-159)||(3091-3153)
[»] scaffold0734 (2 HSPs)
scaffold0734 (77-159)||(5767-5850)
scaffold0734 (77-161)||(5384-5469)
[»] scaffold0078 (2 HSPs)
scaffold0078 (77-157)||(5349-5430)
scaffold0078 (7-160)||(4971-5133)
[»] scaffold0171 (1 HSPs)
scaffold0171 (77-159)||(17541-17624)
[»] scaffold0504 (1 HSPs)
scaffold0504 (77-159)||(10196-10279)


Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 3700511 - 3700223
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata-gatgttc 102  Q
    |||||||| ||||||||||||| ||| |||||| ||||||| |||||| |||||||  |||||||||||||||||| ||||| ||||||||| | |||||    
T  3700511 accgtccacatcgaggcttgaataaccacacaaatgagagagacatcatactcttatccaaaaccttaaggcaatgagtccttttacttataaggtgttc 3700412  T
Q  103 aaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaattttcagaagcttaaaacaccagcttcttcactaacatagtt 202  Q
    ||| || ||||||||||||||||| ||||||||||  ||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  3700411 aacatttactcttttatccgatgtaggacatataactcacacttgcacacaacaataattttcagaagctcaaaacaccagcttcttcactaacatagtt 3700312  T
Q  203 tcttgctgtgatttctatcaaactccgttttgtaaatgctataccaaacatacacaaattaagttggaaacgatcttaatcatcccatc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||    
T  3700311 tcttgctgtgatttctatcaaactccgttttgtaaatgctataccaaacatacacaaattaagttgaagaagatcttaatcatcccatc 3700223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 25483490 - 25483325
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||||||        |||||||||||||    
T  25483490 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttata 25483391  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
     ||||||||||||| ||| |||||||||||||| |||||||||  ||||||| |||||||||||||    
T  25483390 agatgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaacaa 25483325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 54343014 - 54343145
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat-gggtcctcttacttat-agatgttcaac 105  Q
    |||| ||||||||| ||||||| || ||||  ||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||| || ||||||||    
T  54343014 tccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttacccaaaaccttaaggcaatggggtcctcttacttataaggtgttcaac 54343113  T
Q  106 cttcactcttttatccgatgtgggacatataa 137  Q
    ||| ||| ||||||||||||||||||||||||    
T  54343114 ctttactattttatccgatgtgggacatataa 54343145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 1731649 - 1731817
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 95  Q
    |||||||| || |||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||        ||||||||||| |||||    
T  1731649 accgtccacattgaggctagaacaaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttata 1731748  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaattt 163  Q
     ||||||||||||| ||| ||||||| ||||||||||||||||  |||| || ||||||||||||||||    
T  1731749 agatgttcaacctttactgttttatctgatgtgggacatataactcacatttgcacacaacaacaattt 1731817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 36608663 - 36608827
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||| |||||||||||| ||        |||| |||||||||||||     
T  36608663 accgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttacttatg 36608762  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || |||||||| || ||||||||||||||||| ||||||||||  ||||||| ||||||||||||    
T  36608763 aggtgttcaacttttactcttttatccgatgttggacatataactcacacttgcacacaacaaca 36608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 54017597 - 54017754
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| ||||||| ||| |||  ||||| |||||||||||||||  ||||||||||||||        ||||||||||||||||||     
T  54017597 accgtccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttata 54017696  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacac 152  Q
    |||||||||||||| ||| ||||||| || |||||||||||||  ||||||| |||||    
T  54017697 agatgttcaacctttactattttatctgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 10246071 - 10245910
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt-------cctcttacttata-ga 97  Q
    |||||| ||||||||| ||||||| | |||||  || || ||| ||||||||||| ||||||||||||||  |||||       ||||||||||||| |     
T  10246071 cgtccacatcgaggctagaacaaccagacaagcaagggagacaccacactcttacccaaaaccttaaggctttgggtttatggtcctcttacttataagg 10245972  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||| |||||||||||||||||||| |||||||  ||||||| ||||||||||||    
T  10245971 tgttcaacctttactcttttatccgatgtggggcatataactcacacttgcacacaacaaca 10245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 22183266 - 22183430
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||   |||||||||||| ||  ||||||||||  |||||||||||||||||||||        ||| |||||||||    
T  22183266 accgtccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttata 22183365  T
Q  96 gat-gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     || ||||||| || ||||||||||||||||||||| ||||||  ||||||| ||||||||||||    
T  22183366 aattgttcaacatttactcttttatccgatgtgggatatataactcacacttgcacacaacaaca 22183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 50002580 - 50002416
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 95  Q
    |||| ||| ||||||||| |||||||  ||||||| ||||| ||| ||||||||||| |||||||||||| ||||||        ||||||||||||| |    
T  50002580 accgcccacatcgaggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaa 50002481  T
Q  96 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| |||||||||||||||||| |||||||||  ||||||| || |||||||||    
T  50002480 aagtgttcaacctttactcttttatccgatgtgagacatataactcacacttgcaaacaacaaca 50002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 36629391 - 36629230
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||        ||||||||||||||||||     
T  36629391 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttata 36629292  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    || |||| ||| || ||| || |||||||||||||||||||||  |||||||  ||||||||    
T  36629291 aggtgtttaacttttacttttctatccgatgtgggacatataactcacacttgaacacaaca 36629230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 36572173 - 36572009
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 95  Q
    ||||| || |||||||||||||||||  |||||| |||||| ||| || ||||| || |||||||||||||||||||        ||| |||||||||||    
T  36572173 accgttcacatcgaggcttgaacaaccgcacaagcgagagagacaccatactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttata 36572074  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | |||||||| || |||||||||| |||||||||||||||||  |||||||  |||||||||||    
T  36572073 aggtgttcaacatttactcttttattcgatgtgggacatataactcacacttgtacacaacaaca 36572009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 2740848 - 2740693
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gat 98  Q
    |||||||||||||| |||||||  ||||||||||||| ||  |||||||||||  |||||||||||||  |||||        ||||||||||||| | |    
T  2740848 tccatatcgaggctagaacaac--cacaagtgagagagacgccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggt 2740751  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||||||||| ||| || |||||||||||||||||||||  ||||||| |||||||||    
T  2740750 gttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 4390103 - 4390268
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttata 95  Q
    |||||||  ||||||||| |||||||  ||||||  ||||| || |||||||||||| ||||||||||| |||||| |        ||||||||||||||    
T  4390103 accgtccgcatcgaggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaacgcaatgtgctaaaggatcctcttacttata 4390202  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
     | ||||||||||| ||||||||||| ||||||||| || |||  ||||||| |||||||||||||    
T  4390203 aggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaacaacaa 4390268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 4955347 - 4955484
Alignment:
Q  32 cacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccg 122  Q
    ||||||| ||||| ||  ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||||||| ||| |||||||||    
T  4955347 cacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccg 4955446  T
Q  123 atgtgggacatataatccacacttacacacaacaacaa 160  Q
    || || |||||||||  ||||||| |||||||||||||    
T  4955447 atatgagacatataactcacacttgcacacaacaacaa 4955484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 22027966 - 22028127
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata-ga 97  Q
    ||||| |||||| ||  |||||| ||| ||| |||||| ||| |||| |||||| |||||||||||||||||        ||||||||||||||||| |     
T  22027966 gtccacatcgagactaaaacaaccacataagcgagagagacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataagg 22028065  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||||   | ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  22028066 tgttcaacctttcgtattttatccgatgtgggacatataagtcacacttgcacacaacaaca 22028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 3244462 - 3244614
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttca 103  Q
    ||||||||| ||||||| | |||||||||||| ||  |||| |||||| |||||| ||||| |||||        |||||||||||||||| ||||||||    
T  3244462 atcgaggctggaacaaccatacaagtgagagagacgacacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttca 3244561  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||| ||| || ||||||||||| |||||||||  ||||||| |||||||||    
T  3244562 acctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 3244614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 3341201 - 3341118
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||| |||||||||||||||  ||||||| ||||||||||||    
T  3341201 atgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaaca 3341118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 39404552 - 39404388
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 95  Q
    ||||| || ||||||||| ||||||| |||||||  ||||| ||| |||| |||| | |||||||||||||| ||        |||||||||||||||||    
T  39404552 accgttcacatcgaggctagaacaaccacacaagcaagagagacaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttata 39404453  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||| ||||| ||||||||||| ||||||||||||||||  |||||||  |||||||||||    
T  39404452 aggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtacacaacaaca 39404388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 52884960 - 52884877
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  52884960 atggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 52884877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 3340961 - 3340802
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  ||| | ||| ||||||||||| |||||||||||||||        |||||||||||||||||||    
T  3340961 accgtccacatcgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttata 3340862  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaa 154  Q
     | || |||||||| ||||||| ||| |||| |||||||||||  ||||||| |||||||    
T  3340861 aggtgctcaacctttactctttcatctgatgcgggacatataactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 55933126 - 55933277
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||   |||||| ||||| ||| ||||||||||| |||||| ||||||||        ||||||||||||||||||     
T  55933126 accgtccacatcgaggctagaacaactgtacaagtaagagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttata 55933225  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    || ||||||||| | ||| ||||||||||||| ||||||||||  |||||||    
T  55933226 aggtgttcaacccttactattttatccgatgtaggacatataactcacactt 55933277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 44620507 - 44620365
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat- 94  Q
    |||||||| ||| ||| | ||||||| |||||||  ||||| ||||||||||||||| |||||||||||||||||||||         |||||| ||||     
T  44620507 accgtccacatcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttata 44620408  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    || ||||||||||| ||| ||||||||||||||| ||||||||    
T  44620407 aggtgttcaacctttactgttttatccgatgtggaacatataa 44620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 50459875 - 50459709
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    ||||| || ||||||||| ||||||| |||||||  ||||| ||| ||| |||||||  |||||||||||  |||||||        |||||||||||||    
T  50459875 accgtgcacatcgaggctagaacaaccacacaagcaagagagacaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttata 50459776  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
     ||||||||||||| ||||||||| ||||||||| ||||||||  ||||||||  ||| ||||||||    
T  50459775 agatgttcaacctttactcttttaaccgatgtggaacatataactcacacttatgcactacaacaat 50459709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 39792862 - 39793023
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat- 94  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||        || ||||||| |||||     
T  39792862 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttata 39792961  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    || |||||||| || ||| || |||| ||||||||||||||||  |||||||  ||||||||    
T  39792962 aggtgttcaacatttacttttctatctgatgtgggacatataactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 45489421 - 45489497
Alignment:
Q  84 ctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||||| | ||||||||||| |||||||||||||||||| |||||||||| |||||||  |||||||||||    
T  45489421 ctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaacaaca 45489497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 52884841 - 52884688
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacac-aaaaccttaaggcaatgggt--------cctcttacttata-gatgttc 102  Q
    ||||||||| || ||||  ||||||  ||||| ||| ||||||||||| | ||||||||||||||||||||        | ||||||||||| | |||||    
T  52884841 atcgaggctagatcaaccgcacaagcaagagagacaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttc 52884742  T
Q  103 aaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||||| ||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  52884741 aacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 54741261 - 54741341
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||||||||||||| | ||||||||||| ||| || ||||||||||| |||||||||| ||||||| |||||||||    
T  54741261 atgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 15841383 - 15841445
Alignment:
Q  17 aggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    ||||| || |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  15841383 aggctagagcaaccacacaagtgagagagacatcacactcttacccaaaaccttaaggcaatg 15841445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 41707547 - 41707628
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    |||||| || ||||||||| | ||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||||||    
T  41707547 atgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaa 41707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 49303058 - 49302902
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-- 95  Q
    |||||| ||||||| | ||||||   || |||| ||||| ||| ||||||||||| |||||||||||||||||||||        |||||||||| ||      
T  49303058 cgtccacatcgaggatagaacaatcgcataagtaagagatacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttata 49302959  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacaca 151  Q
     ||||||||||||| ||| ||||||  ||||||||||||||||  ||||||||||||    
T  49302958 agatgttcaacctttacttttttatttgatgtgggacatataactcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 50630757 - 50630899
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||| ||| |||||||||  ||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||        ||||||||||||||||||     
T  50630757 accgcccacatcgaggctaaaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 50630856  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |  ||||||||||| ||| ||||||||||||| ||||||||||    
T  50630857 atgtgttcaacctttactattttatccgatgtaggacatataa 50630899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 10246420 - 10246340
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||| || |||||||||   |||||| |||||||||    
T  10246420 atgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaaca 10246340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 34646687 - 34646816
Alignment:
Q  40 agagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 130  Q
    ||||| ||| ||||||||||| |||||||||||||||||| ||        ||||||| ||||| | |||||||| || ||| |||||||||||||||||    
T  34646687 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtggga 34646786  T
Q  131 catataatccacacttacacacaacaacaa 160  Q
    |||||||  |||||||  ||||||||||||    
T  34646787 catataactcacacttgtacacaacaacaa 34646816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 49076534 - 49076614
Alignment:
Q  80 ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||||||||| | ||||||||||| ||| ||||||||||| ||| ||||||||  ||||||| ||||||||||||    
T  49076534 ggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaacaaca 49076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 23817683 - 23817758
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||| ||||||||| ||||||| |||| ||  ||||| ||| ||||||||||| ||||||||||||||||||    
T  23817683 accgtccacatcgaggctagaacaaccacactagcaagagagacaccacactcttacccaaaaccttaaggcaatg 23817758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 44620733 - 44620654
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaac 155  Q
    ||||||||||||||||||| | ||||||||||  ||| ||| ||||||||||||||||||||  ||||||| ||||||||    
T  44620733 atgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacacttgcacacaac 44620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 54936346 - 54936272
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||| ||||||||| ||||||| ||| | |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  54936346 gtccacatcgaggctagaacaaccacata-gtgagagagacaccacactcttacccaaaaccttaaggcaatgggt 54936272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 39404172 - 39404021
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||  ||||||||||| ||||||||||| ||         ||| |||||||||||||||    
T  39404172 accgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttata 39404073  T
Q  96 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| |||||||||| | |||| ||||||||||  |||||||    
T  39404072 aagtgttcaacctttactcttttattcaatgtaggacatataactcacactt 39404021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 41370511 - 41370360
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat- 94  Q
    |||||||| ||||||||| ||||||| || ||||  ||||| |||  |||||||||| |||||| ||||||||||        ||||||||||||||||     
T  41370511 accgtccacatcgaggctagaacaaccactcaagcaagagagacactacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttata 41370412  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    || | |||||| || ||| ||||||||||| ||||||||||||  |||||||    
T  41370411 aggttttcaacatttactattttatccgatttgggacatataactcacactt 41370360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 43174295 - 43174233
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaa 66  Q
    |||||||| ||| ||||||||||||| |||||||||||||| ||| ||||||||||| |||||    
T  43174295 accgtccacatcaaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaa 43174233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 44621156 - 44621017
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat- 94  Q
    |||||||| ||||||||| ||| |||  ||||||  ||||| ||| ||||||||||| |||||||||||| ||||| ||        ||||||||||||     
T  44621156 accgtccacatcgaggctagaataaccgcacaagcaagagaaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttata 44621057  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacata 134  Q
    || ||||||||||| ||| |||||||||||||||| ||||    
T  44621056 aggtgttcaacctttactgttttatccgatgtgggtcata 44621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 54108986 - 54108928
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacata 134  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||    
T  54108986 atgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 28034302 - 28034222
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||||| |||| ||||||| | |||||||||| |||| || ||||||||| |||||||||||| ||||||| |||||||||    
T  28034302 atgggttctctcacttataaagtgttcaacctccacttttctatccgatgcgggacatataattcacacttgcacacaaca 28034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 32941128 - 32941200
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    ||||| ||||||||| |||||||  ||||||  ||||| || |||||||||||| ||||||||||||||||||    
T  32941128 gtccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatg 32941200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 54017785 - 54017845
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatata 136  Q
    ||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||| |||||    
T  54017785 atgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggatatata 54017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 45496932 - 45496820
Alignment:
Q  31 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactcttttatcc 121  Q
    |||||||  ||||| ||| ||||||||||| |||||||||||| |||||        |||||||||||||||| | ||||||||||| ||  ||||||||    
T  45496932 acacaagcaagagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatcc 45496833  T
Q  122 gatgtgggacata 134  Q
    |||||||||||||    
T  45496832 gatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 2741179 - 2741064
Alignment:
Q  50 cacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatcc 140  Q
    ||||||||||| |||||||||||||||||||        ||||||||||||||| | | ||||||||| ||| || |||| ||||||||||||||||  |    
T  2741179 cacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactc 2741080  T
Q  141 acacttacacacaaca 156  Q
    |||||| |||| ||||    
T  2741079 acacttgcacataaca 2741064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 18932751 - 18932829
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||| || |||||||||  |||||| || ||||| ||||| ||| |||||||||||  ||||||||||||||||||||    
T  18932751 accgtacacatcgaggctataacaaccactcaagtaagagagacaccacactcttacctaaaaccttaaggcaatgggt 18932829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 20825987 - 20825848
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa--------tgggtcctcttacttata-ga 97  Q
    ||||| ||| ||||| |||||||  || |||  ||||| ||| ||||||||||| |||||||||||||| |        ||||| |||||| ||||| |     
T  20825987 gtccacatcaaggctagaacaaccgcataaggaagagaaacaccacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataagg 20825888  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  20825887 tgttcaacctttactcttttatccgatgtggaacatataa 20825848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 49880233 - 49880163
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||| | |||||||||||||||  |||||||    
T  49880233 atgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatataactcacactt 49880163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 16888854 - 16888983
Alignment:
Q  40 agagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 130  Q
    ||||| ||||||||||||||| ||||||| |||| |||||        ||| |||||||||||| | | ||||||||| ||| || ||||||||||||||    
T  16888854 agagagacatcacactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtggga 16888953  T
Q  131 catataatccacactt-acacacaacaaca 159  Q
    |||||||  |||||||  ||||||||||||    
T  16888954 catataactcacacttgccacacaacaaca 16888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 41707275 - 41707334
Alignment:
Q  36 agtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata 95  Q
    ||||||||| | | |||||| |||| ||||||||||||| |||||||| |||||||||||    
T  41707275 agtgagagagataccacacttttacccaaaaccttaaggtaatgggtcatcttacttata 41707334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 50788088 - 50788127
Alignment:
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  50788088 tgttcaacctttactattttatccgatgtgggacatataa 50788127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 19504756 - 19504690
Alignment:
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatttt 164  Q
    |||||||| || ||| ||||||||||| ||||||||||||  || ||||  ||||||||||||||||    
T  19504756 tgttcaacttttactattttatccgatatgggacatataactcatacttgtacacaacaacaatttt 19504690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 44620362 - 44620308
Alignment:
Q  84 ctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||||||||| | ||||||||||| ||| |||||||| |||||||||||||||    
T  44620362 ctcttacttataaggtgttcaacctttactattttatcccatgtgggacatataa 44620308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 20826290 - 20826229
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||| ||||||||||||   |||||||| || ||| ||||||||||||||||||||||||    
T  20826290 atgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataa 20826229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 11348411 - 11348495
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    |||| |||||| ||||||| | |||||||||| |||| ||||||| ||||| | ||||||||  |||| || |||||||||||||    
T  11348411 atggatcctctcacttataaagtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaacaacaa 11348495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 11706642 - 11706690
Alignment:
Q  114 ttttatccgatgtgggacatataatccacacttacacacaacaacaatt 162  Q
    ||||||||||||||||||||| ||  ||| ||| |||||||||||||||    
T  11706642 ttttatccgatgtgggacatacaactcacccttgcacacaacaacaatt 11706690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 43174576 - 43174496
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactctttt-atccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||| | ||||||||||| |||||||| ||| |||||| | |||||||  |||||||  |||||||||||    
T  43174576 gtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactcacacttgtacacaacaaca 43174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 30244420 - 30244260
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-agat 98  Q
    |||| ||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||        |||||||||||||| || |    
T  30244420 tccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggt 30244321  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     ||||||||| ||||||||||||||||||||||||||||  |||||||  |||||||||||    
T  30244320 cttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaaca 30244260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 7517725 - 7517570
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttca 103  Q
    ||||||||| ||||||| |||||||||||| | ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||    
T  7517725 atcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttca 7517626  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  7517625 acctttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 7517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 1085620 - 1085784
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| ||||||| |||||||| ||||| ||  ||||||||||| |||||||||||||||||||||        |||||||||||||    
T  1085620 accgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 1085719  T
Q  96 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  1085720 aagtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 1085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 45434781 - 45434626
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttca 103  Q
    ||||||||| |||||||  ||||||| ||||| ||||||||||||||| |||||||||||||||        ||||||||||||||||||| | ||||||    
T  45434781 atcgaggctagaacaactccacaagtaagagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttca 45434682  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||| ||| ||||||||||||||||||||||||   ||||||  |||||||||||    
T  45434681 acctttacttttttatccgatgtgggacatataacttacacttgtacacaacaaca 45434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 30245223 - 30245067
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gat 98  Q
    |||| ||||||||||||||||| |||||||  ||||||||  ||||||||||| ||||||||||||||||||        |||| ||||||||||| | |    
T  30245223 tccacatcgaggcttgaacaaccacacaag--agagacac--cacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggt 30245128  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||| ||||||||||||||||||| ||||||||  |||||||  |||||||||||    
T  30245127 gttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaaca 30245067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 159
Target Start/End: Complemental strand, 7554152 - 7554015
Alignment:
Q  31 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatcc 121  Q
    ||||||| |||||| ||| ||||||||||| |||||||||||||| ||||||        ||||||||||||| | ||||||||||| ||| ||||||||    
T  7554152 acacaagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatcc 7554053  T
Q  122 gatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||  ||||||| ||||||||||||    
T  7554052 gatgtgggacatataactcacacttgcacacaacaaca 7554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 30255414 - 30255329
Alignment:
Q  75 caatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  30255414 caatgggccctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaacaaca 30255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 34218038 - 34218203
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat- 94  Q
    |||||||| ||||||||||||||||| | ||||| |||||| ||| ||||||||||| |||||||||||| ||||||        ||||||| ||||||     
T  34218038 accgtccacatcgaggcttgaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttata 34218137  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    || |||||||| || ||| |||||||||||||| |||||||||  |||| ||  ||||||||||||    
T  34218138 aggtgttcaacatttacttttttatccgatgtgagacatataactcacatttgtacacaacaacaa 34218203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 23381 - 23545
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 95  Q
    |||||||| ||||||||| |||||||  |||| |  ||||| ||| ||||||||||| |||||||||||||||||        |||||||||||||||||    
T  23381 accgtccaaatcgaggctagaacaaccgcacatgcaagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttata 23480  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||| || |||||||||||| ||||||||  |||| || ||||||||||||    
T  23481 aggtgttcaacctttactattgtatccgatgtggaacatataactcacaattgcacacaacaaca 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 159
Target Start/End: Original strand, 22566712 - 22566830
Alignment:
Q  50 cacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatcc 140  Q
    ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||||||| |||||||||||||||||||||||||| |  |    
T  22566712 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactc 22566811  T
Q  141 acacttacacacaacaaca 159  Q
    |||||| || |||||||||    
T  22566812 acacttgcatacaacaaca 22566830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 30245569 - 30245484
Alignment:
Q  75 caatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||| ||||||||||||| | ||||||||||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  30245569 caatgggccctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 30245484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 45754860 - 45754704
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-agatgttca 103  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||| ||||        ||| |||||||||| || ||||||    
T  45754860 atcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttca 45754761  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    || || ||| ||||||||||||| ||||||||||  |||||||  |||||||||||||    
T  45754760 acatttactattttatccgatgt-ggacatataactcacacttgtacacaacaacaat 45754704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 41910703 - 41910762
Alignment:
Q  100 ttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  41910703 ttcaacctttactcttttatccgatgtgggacatataactcacacttacacacaacaaca 41910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 6054714 - 6054572
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||| ||||| ||||||| | ||||||  |||| ||| ||||||||||| |||||||||||||||        ||||||||||||||||||     
T  6054714 accgtccacatcaaggctagaacaaccatacaagtaggagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttata 6054615  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    || |||||||| || ||| |||||||||||||| |||||||||    
T  6054614 aggtgttcaacatttactattttatccgatgtgagacatataa 6054572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 11845345 - 11845203
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 95  Q
    |||||| | ||||||||| |||||||  ||||||  ||||| ||| ||||||||||  |||||||||||||||||||        |||||||||||||||    
T  11845345 accgtctacatcgaggctagaacaactgcacaagcaagagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttata 11845246  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
     | ||||||||||| ||| ||||||||||||||| ||||||||    
T  11845245 aggtgttcaacctttactattttatccgatgtggaacatataa 11845203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 30244776 - 30244691
Alignment:
Q  75 caatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||| |||||||||| ||||| | ||||||||||| |||||||||||| |||||||||||||||  ||||||| ||||||||||||    
T  30244776 caataggtcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaaca 30244691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 3946986 - 3946894
Alignment:
Q  165 cagaagcttaaaacaccagcttcttcactaacatagtttcttgctgtgatttctatcaaactccgttttgtaaatgctataccaaacatacac 257  Q
    ||||||||  ||| |||||||||| | || ||||||||| |||| ||||||||||||||||| ||||||| || || ||||||||||||||||    
T  3946986 cagaagctccaaataccagcttctaccctgacatagttttttgccgtgatttctatcaaacttcgttttgcaattgttataccaaacatacac 3946894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 40094859 - 40094943
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||||||||||||||||| | |||| |||||| |||||||||| ||||||| |||||||||  ||||||| |||||||||||||    
T  40094859 atgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactcacacttgcacacaacaacaa 40094943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 22567047 - 22567206
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gat 98  Q
    |||| ||||||||  |||||||  ||||||  ||||| ||| |||||||||||  |||||||||||||||||        |||||||||||||||| | |    
T  22567047 tccacatcgaggcccgaacaaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 22567146  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||| ||||||||||||||||| |||||||| |  ||||||| || |||||||||    
T  22567147 gttcaacctttactcttttatccgatgt-ggacatattactcacacttgcatacaacaaca 22567206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 24177508 - 24177425
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||| |||||||||| | |||||| |||| ||||||||||||||||||||||||||||  || |||| ||||||||||||    
T  24177508 atgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacacaacaaca 24177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 45433395 - 45433231
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtc--------ctcttacttata 95  Q
    |||| ||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||| ||||||||||| |||         ||||||||||||    
T  45433395 accgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttata 45433296  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| |||||||||||||||||||  |||||||  |||||||  |||||||||||    
T  45433295 aggtgttcaacctttactcttttatccgatgtggatcatataactcacacttgtacacaacaaca 45433231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 14681662 - 14681522
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta-t 94  Q
    |||||||| ||| ||||| ||||||| ||||  |||||||||||  ||||||||||| |||||||||||| ||||||||        |||||||||||      
T  14681662 accgtccacatcaaggctagaacaaccacacttgtgagagacac--cacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttaca 14681565  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    || ||||||||||| ||| ||||||| ||||||||||||||||    
T  14681564 aggtgttcaacctttactattttatctgatgtgggacatataa 14681522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 24838722 - 24838872
Alignment:
Q  21 ttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt---------cctcttacttata-gatgttcaaccttca 110  Q
    ||||||||| |||||||  ||||| || |||||||||||| |||||||||||| ||| ||||         | ||||||||||| | ||||||||||| |    
T  24838722 ttgaacaaccacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaaccttta 24838821  T
Q  111 ctcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    ||||||||| ||||||| |||||||||   ||||||| |||||||||||||    
T  24838822 ctcttttattcgatgtgagacatataacttacacttatacacaacaacaat 24838872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 36109007 - 36109084
Alignment:
Q  82 tcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 158  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||| || ||||||  ||||||| |||||||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 37533368 - 37533522
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||  ||||||  | ||| ||| ||||||||||| |||||||||||||||        ||||||||||||||||||     
T  37533368 accgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttata 37533467  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttaca 149  Q
    || ||||||||||| ||| |||||| | |||| | ||||||||  ||||||||||    
T  37533468 aggtgttcaacctttactattttattcaatgtagaacatataactcacacttaca 37533522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 19122876 - 19122744
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-agatgttca 103  Q
    |||||| || ||||||| |||||||  ||| | ||| ||||||||||| |||||||||||||||||||        |||||||||||||| || ||||||    
T  19122876 atcgagactagaacaaccacacaagcaagatagacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttca 19122777  T
Q  104 accttcactcttttatccgatgtgggacatataa 137  Q
    ||||| ||| ||||||||||||| ||||||||||    
T  19122776 acctttactattttatccgatgt-ggacatataa 19122744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 36534869 - 36534953
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||||||||||||||||| | ||||||||||  ||| |||||||||| |||||||||||||   |||||| |||||||||||||    
T  36534869 atgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaacaacaa 36534953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 47129168 - 47129085
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| || |||||||||| ||| |||||||||||||| |||||||||  |||||||   ||||||||||    
T  47129168 atgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactcacacttgtgcacaacaaca 47129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 29157683 - 29157568
Alignment:
Q  40 agagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 130  Q
    ||||| ||| ||||||||||| |||||||||||||||||||        ||| ||||||||||| | ||||||||||| ||| ||||||||| |||||||    
T  29157683 agagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtggga 29157584  T
Q  131 catataatccacactt 146  Q
    |||||||  |||||||    
T  29157583 catataactcacactt 29157568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 36939741 - 36939900
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata-gat 98  Q
    |||| ||||||||| |||||||  || |||  ||||| ||| |||||| |||| |||||||||||||||||||        ||||||||||||||| | |    
T  36939741 tccacatcgaggctagaacaaccgcataagcaagagaaacaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggt 36939840  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 158  Q
    ||||||| || ||| |||||| |||| ||||||||||||  ||||||| |||| ||||||    
T  36939841 gttcaacttttactattttatacgatttgggacatataactcacacttgcacagaacaac 36939900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 37533095 - 37533165
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||| |||||||||||||||  |||||||    
T  37533095 atgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacactt 37533165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 40230376 - 40230454
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaa 154  Q
    ||||||||||||||||||| |||||||||| || ||| |||||| |||||||||||||||||   |||||| |||||||    
T  40230376 atgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttgcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 30244506 - 30244453
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactct 57  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||    
T  30244506 accgtccacatcgaggcttgaacaaccacacaagtgagagagacaccacactct 30244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 30253638 - 30253571
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||| ||||||||||||||||| |||||||  ||||||||  ||||||||||| ||||||||||||||||||    
T  30253638 tccacatcgaggcttgaacaaccacacaag--agagacac--cacactcttacccaaaaccttaaggcaatg 30253571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 1085288 - 1085417
Alignment:
Q  40 agagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttat-agatgttcaaccttcactcttttatccgatgtggga 130  Q
    ||||| ||| ||||||||||| ||||||||||||||||||        ||| ||||||||||| || |||||||| || ||| ||||||||||| |||||    
T  1085288 agagaaacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgatatggga 1085387  T
Q  131 catataatc-cacacttacacacaacaaca 159  Q
    |||| || | ||||||| ||||||||||||    
T  1085388 cataaaaactcacacttgcacacaacaaca 1085417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 43241564 - 43241484
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||| ||||||||| | ||||||||||| | | ||||||||||||||| ||||||||  ||||||| |||||||||||||    
T  43241564 gtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaacaacaa 43241484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 118386 - 118469
Alignment:
Q  77 atgggtcctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||| ||||||||||||| || ||||||||||| ||| || |||| ||||||||||||||||   |||||| ||||||||||||    
T  118386 atggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataacttacacttgcacacaacaaca 118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 16569269 - 16569186
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | | ||||||||| ||| || ||||||||||| |||||||||  ||||||| || |||||||||    
T  16569269 atgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 16596393 - 16596476
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | | ||||||||| ||| || ||||||||||| |||||||||  ||||||| || |||||||||    
T  16596393 atgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 36623033 - 36622950
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||| ||||| |||||||| | |||| |||||| ||| ||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  36623033 atggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacaataaca 36622950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 30253721 - 30253671
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactct 57  Q
    ||||| ||||||||||||||||| |||||||||||||| ||| ||||||||    
T  30253721 gtccacatcgaggcttgaacaaccacacaagtgagagagacaccacactct 30253671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 23569043 - 23569084
Alignment:
Q  41 gagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  23569043 gagagacatcacactcttacccaaaaccttaaggcaatgggt 23569084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 30245309 - 30245256
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactct 57  Q
    |||||||| || |||||||||||||| |||||||||||||| ||| ||||||||    
T  30245309 accgtccacattgaggcttgaacaaccacacaagtgagagagacaccacactct 30245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 40094502 - 40094559
Alignment:
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||||||||| ||||||||||| ||||| ||||||||||  ||||||| |||||||||    
T  40094502 gttcaacctttactcttttatctgatgttggacatataactcacacttgcacacaaca 40094559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 47129523 - 47129450
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa 77  Q
    |||||||| ||||||||| || ||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||    
T  47129523 accgtccacatcgaggctagatcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaa 47129450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 8128526 - 8128606
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||||||||||||| |||| | ||||||||||| | | || |||||||| ||||||||||||  ||||||| |||||||||    
T  8128526 atgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 9901698 - 9901635
Alignment:
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||  |||||||| |||||| ||||    
T  9901698 agatgttcaacctttactgttttatccgatgt-ggacatataactcacacttatacacaataaca 9901635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 28301628 - 28301708
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||||||||||||| | |||||| | || ||| || ||||||||||| |||||||||  ||||||| |||||||||    
T  28301628 atgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 37167935 - 37167859
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg 80  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||| ||||| ||||||    
T  37167935 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaactttaagtcaatgg 37167859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 41854776 - 41854625
Alignment:
Q  16 gaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agatgttcaacc 106  Q
    |||||| |||||||  ||||||| ||| | || |||||||||||| |||||||||||||||        || |||| |||| ||||| || |||||||||    
T  41854776 gaggctagaacaaccgcacaagtaagaaagacgtcacactcttacccaaaaccttaaggcattatatttataggtcatcttgcttataaggtgttcaacc 41854677  T
Q  107 ttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || ||||||||| | ||||||||||||||||  || |||| ||||||| ||||    
T  41854676 tttactctttta-ctgatgtgggacatataactcatacttgcacacaaaaaca 41854625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 44361557 - 44361608
Alignment:
Q  85 tcttacttatagatgttcaaccttcactcttttatccgatgtgggacatata 136  Q
    ||||||||| || |||||||| || |||||||||||||||||| ||||||||    
T  44361557 tcttacttaaaggtgttcaacttttactcttttatccgatgtgagacatata 44361608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 37532755 - 37532821
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaacctt 70  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||||    
T  37532755 accgtccacatcgaggctagaacaacagcacaagctagagagacaccacactcttacccaaaacctt 37532821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 7517806 - 7517765
Alignment:
Q  9 ccatatcgaggcttgaacaacgacacaagtgagagacacatc 50  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    
T  7517806 ccatatcgaggctagaacaaccacacaagtgagagagacatc 7517765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 7518072 - 7518031
Alignment:
Q  9 ccatatcgaggcttgaacaacgacacaagtgagagacacatc 50  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    
T  7518072 ccatatcgaggctagaacaaccacacaagtgagagagacatc 7518031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 37346043 - 37345998
Alignment:
Q  33 acaagtgagagacacatcacactcttacacaaaaccttaaggcaat 78  Q
    |||||||||||| || |||||||||||| |||||| ||||||||||    
T  37346043 acaagtgagagagacgtcacactcttactcaaaactttaaggcaat 37345998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 45755075 - 45755010
Alignment:
Q  10 catatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc 75  Q
    |||||||||||||||||||| |||||||| || || ||| |||||| |||| |||||  |||||||    
T  45755075 catatcgaggcttgaacaaccacacaagtaagggagacaccacacttttacccaaaattttaaggc 45755010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 2512630 - 2512582
Alignment:
Q  31 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||||||||| | |||||||||||||||||||  ||||| |||||    
T  2512630 acacaagtgagagatatatcacactcttacacaaaatattaagacaatg 2512582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 20599383 - 20599303
Alignment:
Q  81 gtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||||||| ||||| | |||| | |||| ||| ||||||||||| ||||||||||||  |||||||| | ||||||||||    
T  20599383 gtcctcttatttataaagtgtttatcctttacttttttatccgatatgggacatataactcacacttatagacaacaacaa 20599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 26661526 - 26661690
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||| |||||||||||||||        ||||||||||| ||||||     
T  26661526 accgtccatatcgaggcttgaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttata 26661625  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || ||||||||||| ||||||||| ||||||||||||||||||  |||||||  |||||||||||    
T  26661626 aggtgttcaacctttactcttttacccgatgtgggacatataactcacacttgtacacaacaaca 26661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 31767165 - 31767330
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||||||| |||||| || ||||||| |||||||  ||| | || |||||||||||| |||||||||||||||        |||||||||||||||||||    
T  31767165 accgtccacatcgagtctagaacaaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttata 31767264  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
     | ||||||||||| ||| ||||||||||||||| |||||||| |||||||| |||||||||||||    
T  31767265 aggtgttcaacctttactgttttatccgatgtggaacatataacccacacttgcacacaacaacaa 31767330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 41157145 - 41156978
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||| ||| ||||||||| ||||||| |||||||  | ||| ||| ||||||||||| ||||||||||| ||||||        ||||||||||||||||    
T  41157145 accgcccacatcgaggctagaacaaccacacaagcaatagagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttata 41157046  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatt 162  Q
     | ||||||||||| ||||||||||||| | ||||||||||||| ||||||| |||||||||||||||    
T  41157045 aggtgttcaacctttactcttttatccgttatgggacatataattcacacttgcacacaacaacaatt 41156978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 37556256 - 37556101
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt-------cctcttacttata-gatgttcaa 104  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||| ||||||       ||||||||||||| |||||||||    
T  37556256 atcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatggtcctcttacttataagatgttcaa 37556157  T
Q  105 ccttcactctttt-atccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||| ||| |||| ||||||||||||||||||||  |||||||  |||||||||||    
T  37556156 cctttactatttttatccgatgtgggacatataactcacacttgtacacaacaaca 37556101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 34364663 - 34364497
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 93  Q
    ||||| |||| ||||||||| || ||||  || ||| |||||| ||||||||||||||| |||||||||||||| ||||||        |||||||||||    
T  34364663 gaaccatccacatcgaggctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttactta 34364564  T
Q  94 ta-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||||||||||    
T  34364563 taaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaaca 34364497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 22077499 - 22077660
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa--------tgggtcctcttacttata 95  Q
    |||||||||||||| |||||||||||  || |||||||||| ||  ||||||||||| |||||||||||||| |        ||||||||||||||||||    
T  22077499 accgtccatatcgatgcttgaacaaccgcataagtgagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttata 22077598  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
     | ||||||||||| ||| || ||||||||||| |||||||||  ||||||| |||||||||    
T  22077599 aggtgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 22077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 17294696 - 17294569
Alignment:
Q  39 gagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttataga-tgttcaaccttcactcttttatccgatgtggg 129  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  17294696 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtggg 17294597  T
Q  130 acatataatccacacttacacacaacaa 157  Q
    ||||||||  |||||||  |||||||||    
T  17294596 acatataactcacacttgtacacaacaa 17294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 37555874 - 37555721
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg-------ggtcctcttacttatagatg--ttca 103  Q
    ||||||||||||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||| | |       |||||||||||||||| |||  ||||    
T  37555874 atcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctaaggatttaaggtcctcttacttata-atgtattca 37555776  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 158  Q
    ||||||||| |||||||||||||||||| |||||  |||||||  ||||||||||    
T  37555775 accttcactattttatccgatgtgggacttataactcacacttttacacaacaac 37555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 41157529 - 41157367
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||| ||| ||||||||| ||||||| |||||||  ||| | ||| ||||||||||| |||||||| ||||||||||||        |||||||||||||    
T  41157529 accgcccacatcgaggctagaacaaccacacaagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttata 41157430  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
     | |||||||| || ||||||||||| ||||||||||||||||  ||||||| ||||||||||    
T  41157429 aggtgttcaacttttactcttttatctgatgtgggacatataactcacacttgcacacaacaa 41157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 44290828 - 44290980
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactctt-acacaaaaccttaaggcaatgggt--------cctcttacttat 94  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||| || |||||||||||||||||||||        ||||||||||||    
T  44290828 accgtccacatcgaggctagaacaaccgcacaagcaagagatacaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat 44290927  T
Q  95 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    | | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  44290928 aaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 44290980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 44290462 - 44290613
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||   |||||  ||| | ||| || |||||||| |||||||||||||||||||||        |||||||||||||    
T  44290462 accgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 44290561  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     ||||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  44290562 agatgttcaacctttactattttatccgatgtgggacatataactcacactt 44290613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 41184510 - 41184595
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||||||||||||    
T  41184510 atgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaacaat 41184595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 45084530 - 45084378
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--atgggtcctcttacttata-gatgt 100  Q
    |||||||  ||||||| | |||||||  ||||||  ||||| ||| ||| ||||||| |||||||||||| |   ||||||||||||||||||| | |||    
T  45084530 accgtccgcatcgaggttagaacaaccgcacaagcaagagagacaccactctcttacccaaaaccttaagacgttatgggtcctcttacttataaggtgt 45084431  T
Q  101 tcaaccttcactcttttatccgatgtgggacatataatccacacttacacaca 153  Q
    |||||||| ||| ||||||||||||||||| ||||||  ||||||| ||||||    
T  45084430 tcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 41142527 - 41142362
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactctt-acacaaaaccttaaggcaatgggt--------cctcttacttat 94  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||  ||||||||| ||  ||||||||||||||||||||        ||| ||||||||    
T  41142527 accgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactctttaccaaaaaccttaaggcaatgggtttatgggtccttttacttat 41142428  T
Q  95 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    | | ||||||||||| ||| ||||||||||||||||||||||||  ||||||| |||| |||||||    
T  41142427 aaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcacagaacaaca 41142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 50052108 - 50052179
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactta 147  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  50052108 atgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacactta 50052179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 24600316 - 24600479
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttactta 93  Q
    |||| ||||| ||||||||| ||||||| | || || |||||| ||| |||||||||||||||||||||||| ||        ||| || ||||||||||    
T  24600316 gaactgtccacatcgaggctagaacaaccatactagcgagagagacaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttactta 24600415  T
Q  94 t-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    | | |||||||||||| ||| || |||||||| ||||||||||||  ||||||| |||||||||    
T  24600416 taatatgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 48588492 - 48588631
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||  ||||||| ||||| ||| | ||||||||| |||||||||||||||||        ||||| ||||||||||     
T  48588492 accgtccacatcgaggctagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttata 48588591  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacata 134  Q
    || ||||||||||| ||| ||||||||||||| |||||||    
T  48588592 aggtgttcaacctttactattttatccgatgtcggacata 48588631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 3537603 - 3537745
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||||||| |||||        |||||||||||| ||     
T  3537603 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcata 3537702  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    || ||||||||||| ||| ||||||||||||||||||||||||    
T  3537703 aggtgttcaacctttactattttatccgatgtgggacatataa 3537745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 3875335 - 3875477
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat- 94  Q
    |||||||| ||||||||| ||||||| |||| ||||||||| ||  |||| ||||||  ||||||||||||||||||        ||||||||||||||     
T  3875335 accgtccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttacttata 3875434  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    || ||| ||||||| ||| |||||||||||||| |||||||||    
T  3875435 aggtgtacaacctttacttttttatccgatgtgtgacatataa 3875477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 34365081 - 34364915
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 93  Q
    ||||| |||| ||||||| | || ||||  || ||| |||||| ||| ||||||||||| |||||||||||||| ||||||        |||||||||||    
T  34365081 gaaccatccacatcgaggttagagcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttactta 34364982  T
Q  94 ta-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || | ||||||||||| | | |||||||||||||| |||||||||  ||||||| ||||||||||||    
T  34364981 taaggtgttcaacctttattattttatccgatgtgtgacatataactcacacttgcacacaacaaca 34364915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 40082556 - 40082398
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg-------ggtcctcttacttata-gatg 99  Q
    |||| ||||||||| ||||||   ||||||  ||||| | | ||||||||||| ||||||||||||||||||       | |||||||||||||| | ||    
T  40082556 tccacatcgaggctagaacaaacgcacaagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttatgatcctcttacttataaggtg 40082457  T
Q  100 ttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 158  Q
    ||||||||| ||| ||||||||||||| ||||||||||  ||||||| | |||||||||    
T  40082456 ttcaacctttactattttatccgatgtaggacatataactcacacttgcgcacaacaac 40082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 9956054 - 9955899
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat---------gggtcctcttacttataga-tgttc 102  Q
    ||||||||| || ||||  ||||||  ||||| ||||||||||||||| |||||||||||||||||         |||||||||||||||||   |||||    
T  9956054 atcgaggctagagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttc 9955955  T
Q  103 aaccttcactctttt-atccgatgtgggacatataatccacacttacacacaacaa 157  Q
    |||||| ||| |||| ||| ||||||||||||||||  |||||| |||||||||||    
T  9955954 aacctttactttttttatctgatgtgggacatataactcacactaacacacaacaa 9955899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 37850604 - 37850768
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||||||| ||||||||| || ||||  ||||||||||||| ||| ||||||||||  | |||||||||  ||        |||||| ||||||||||||    
T  37850604 accgtccacatcgaggctagagcaaccgcacaagtgagagagacaccacactcttatccgaaaccttaaaacattaggtttatgggttctcttacttata 37850703  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||  ||| |||||| |||||||||||||||||  ||||||| ||||||||||||    
T  37850704 aggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaacaaca 37850768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 3537232 - 3537302
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  3537232 atgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 3537302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 26661919 - 26662066
Alignment:
Q  21 ttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agatgttcaaccttcac 111  Q
    ||||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||        ||||||| ||| |||||| || ||||||||||| ||    
T  26661919 ttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttac 26662018  T
Q  112 tcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||| ||| ||||| ||||||  |||||||  |||||||||||    
T  26662019 tcttttatctgatatgggatatataactcacacttgtacacaacaaca 26662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 14319021 - 14318879
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| || |||||| |||||||  ||||| | ||||| ||| ||||||||||| |||||||||||||||        ||||||| ||||||||||     
T  14319021 accgtccacattgaggctagaacaaccgcacaaataagagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttata 14318922  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    || ||||||||||| ||| |||||||||| |||| ||||||||    
T  14318921 aggtgttcaacctttactattttatccgacgtggaacatataa 14318879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 45493978 - 45494124
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttata 95  Q
    |||||||| ||||||||||||||||| ||| |||  ||||| ||| ||||||||||  |||||| |||||||||||||        || |||||||||||    
T  45493978 accgtccacatcgaggcttgaacaaccacataaggaagagagacaccacactcttatccaaaactttaaggcaatgggtttatggatcatcttacttata 45494077  T
Q  96 -----gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
         | ||||||||||| ||| ||||||||||||||||||||||||    
T  45494078 tatatggtgttcaacctttactattttatccgatgtgggacatataa 45494124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 21378126 - 21378210
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||||||||||||||||| ||| ||||||||| ||| || |||||||| ||||||||||||   |||||| |||||||||||||    
T  21378126 atgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaacaacaa 21378210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 29798353 - 29798188
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||| ||||||||| | ||||||| ||||  |  ||||| ||| ||||||||||  ||| |||||||||||||||||        |||||||||||||    
T  29798353 accgtctatatcgaggttagaacaaccacacttgcaagagagacaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttata 29798254  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
     | ||||||||||| ||| |||||||| |||| ||||||||||  ||||||| || ||||||||||    
T  29798253 aggtgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaacaacaa 29798188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 11977434 - 11977270
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||  |||  |  ||||| ||||||||||||||| |||||||||||||||        ||| || |||||||||||     
T  11977434 accgtccacatcgaggctagaacaaccgcacttgcaagagagacatcacactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttata 11977335  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || |||||||| || ||| ||||| ||||||||||||||||||  |||||||  ||||| |||||    
T  11977334 aggtgttcaacatttactgttttacccgatgtgggacatataactcacacttgtacacagcaaca 11977270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 34649592 - 34649428
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||| |||| ||  ||||| ||  | ||||||||| |||||||||||||||        |||||| ||   |||||||    
T  34649592 accgtccacatcgaggctagaacaaccacactagcaagagagacgcctcactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttata 34649493  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||||||||||||||||||||||||||||  |||||||  | |||||||||    
T  34649492 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtatacaacaaca 34649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 3550838 - 3550723
Alignment:
Q  40 agagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 130  Q
    ||||| ||| ||||||||||| |||||| ||||||||||||||        ||||||||||||| | ||||||||||| ||| ||||||| |||||||||    
T  3550838 agagagacaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtggga 3550739  T
Q  131 catataatccacactt 146  Q
    |||||||  |||||||    
T  3550738 catataactcacactt 3550723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 32594748 - 32594871
Alignment:
Q  32 cacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactcttttatccg 122  Q
    ||||||| ||||| ||| ||||||||||| |||||||||||| |||||        |||||||||||||||| | ||||||||||| ||| ||||||| |    
T  32594748 cacaagtaagagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctg 32594847  T
Q  123 atgtgggacatataatccacactt 146  Q
    |||| ||||||||||  |||||||    
T  32594848 atgtaggacatataactcacactt 32594871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 41759637 - 41759486
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||| ||||| ||||||| ||| |||  ||||| ||| ||||||||||| |||||||||||||||        |||| || ||||||||||     
T  41759637 accgtccacatcaaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttata 41759538  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    || |||||||| || ||| |||||||||||||| |||||||||  |||||||    
T  41759537 aggtgttcaacttttactattttatccgatgtgtgacatataactcacactt 41759486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 5528843 - 5528900
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  5528843 gtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataa 5528900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 35154150 - 35154207
Alignment:
Q  102 caaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  35154150 caacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 35154207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 5575174 - 5575110
Alignment:
Q  80 ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccaca 143  Q
    |||||||||||||||| | ||||||||||| |||||| ||||||| |||||||||||||| ||||    
T  5575174 ggtcctcttacttataaggtgttcaacctttactcttctatccgacgtgggacatataattcaca 5575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 22077114 - 22077189
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||| |||||||||||||||||  || ||||||| || || |||||||||||  |||||||||| |||||||    
T  22077114 accgtccacatcgaggcttgaacaaccgcataagtgagggagacgtcacactcttatccaaaaccttagggcaatg 22077189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 22793431 - 22793360
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa 77  Q
    ||||||||| |||||  ||||||| |||||||| ||||| || |||||||||||| ||||||| ||||||||    
T  22793431 cgtccatattgaggccagaacaaccacacaagtaagagagacgtcacactcttactcaaaaccgtaaggcaa 22793360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 66475 - 66638
Alignment:
Q  3 aaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat 94  Q
    ||||||||| || |||||| |||||||  |||||| |||||| ||   | |||||||| |||||||||||||| ||        || |||||||||||||    
T  66475 aaccgtccacattgaggctagaacaaccgcacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttat 66574  T
Q  95 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    | | ||||||||||| ||| || |||||||| ||| ||||||||  ||||||| ||||||||||    
T  66575 aaggtgttcaacctttacttttctatccgatatggaacatataactcacacttgcacacaacaa 66638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 39066217 - 39066368
Alignment:
Q  17 aggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaacct 107  Q
    ||||| ||||||| ||| |||| ||||| ||| ||||||||||  |||||||||||| |||||        |||| ||||| ||||| | ||||||||||    
T  39066217 aggctagaacaaccacataagtaagagagacaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacct 39066316  T
Q  108 tcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    | ||| || |||||||||||| | ||||||  ||||||| ||||||||||||    
T  39066317 ttacttttctatccgatgtggaatatataactcacacttgcacacaacaaca 39066368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 4878855 - 4878796
Alignment:
Q  97 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||||||| ||||||| ||||||||||||||| ||||||||  |||| || |||||||||    
T  4878855 atgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaaca 4878796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 32168705 - 32168780
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||| ||||||||||||    
T  32168705 gtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctcaaggcaatgggt 32168780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 38804370 - 38804510
Alignment:
Q  15 cgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttataga-tgttcaac 105  Q
    ||||||| |||||||  ||||||  ||||| |||  |||||||||| |||||||||||||  ||||||        |||||||||||||   ||||||||    
T  38804370 cgaggctagaacaaccgcacaagcaagagagacactacactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaac 38804469  T
Q  106 cttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||| |||||||||| ||||||||||| |||||  |||||||    
T  38804470 ctttactcttttattcgatgtgggacgtataactcacactt 38804510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 47380184 - 47380246
Alignment:
Q  17 aggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||| |||| | |||||||||||| |  |||||||||||| |||||| |||||||||||    
T  47380184 aggcttgagcaaccagacaagtgagagagatgtcacactcttacccaaaactttaaggcaatg 47380246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 5320050 - 5320131
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    ||||||||||| ||||||| | |||||||| || ||| || |||||||||||| ||||||||  ||||||| || |||||||    
T  5320050 atgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacacttgcatacaacaa 5320131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 157
Target Start/End: Complemental strand, 5420802 - 5420643
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-aga 97  Q
    ||||| ||||||||||||||||| ||||||||||| || || ||||||||||||| ||||||||||||||||||        |||||||||||||| |||    
T  5420802 gtccacatcgaggcttgaacaaccacacaagtgagggagacgtcacactcttacaaaaaaccttaaggcaatgggtttatgagtcctcttacttataaga 5420703  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    ||||||||||| ||| || |||||||||||||||||||||| ||||||| || |||||||    
T  5420702 tgttcaacctttactattctatccgatgtgggacatataatacacacttgcatacaacaa 5420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 3038294 - 3038459
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| |   ||||||||||| |||||||||||||||||||||        ||| |||||||||    
T  3038294 accgtccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttata 3038393  T
Q  96 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||  ||||||||||||    
T  3038394 aagtgttcaacctttactattttatccgatgtgggacatataactcacacttgtacacaacaacaa 3038459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 9309508 - 9309345
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||| ||| |  ||||||| ||| ||||||||||| | | ||||||||||||||        ||||||||||||||||    
T  9309508 accgtccacatcgaggctagaacaaccacatac-tgagagagacaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttata 9309410  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | |||||||| || ||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  9309409 aggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 9309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 147524 - 147441
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  147524 atgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttacacgcaacaaca 147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 18371663 - 18371802
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca-------atgggtcctcttacttat 94  Q
    |||||||||| ||||| ||| || ||||  ||||| ||||||||||| ||||||||||| |||||||||||||||       ||||||| |||||||||     
T  18371663 gaaccgtccacatcgaagctagagcaaccgcacaaatgagagacacaccacactcttacccaaaaccttaaggcatgggtttatgggtcttcttactta- 18371761  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
      |||||||||||| ||| |||||||||||||| |||||||||    
T  18371762 --atgttcaacctttactattttatccgatgtgtgacatataa 18371802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 3670216 - 3670063
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttactta 93  Q
    |||||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||| |        |||||||||| ||||||    
T  3670216 gaaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatactta 3670117  T
Q  94 t-agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    | || |||| |||||| ||| ||||||||||||||||||||||||  |||||||    
T  3670116 taaggtgttaaacctttactattttatccgatgtgggacatataactcacactt 3670063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 34835026 - 34834866
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agat 98  Q
    |||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||        ||| ||| |||||||||| || |    
T  34835026 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggt 34834927  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||| |||||| ||| |||||||| |||||||||||||||  |||||||  |||||||||||    
T  34834926 gtttaacctttactattttatccaatgtgggacatataactcacacttgtacacaacaaca 34834866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 70297 - 70420
Alignment:
Q  23 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttcaaccttcactc 113  Q
    ||||||| |||||||  ||| | || ||||||||||||  ||||||||||||||        ||||||||||||||||||| |||||||||| || ||||    
T  70297 gaacaaccacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactc 70396  T
Q  114 ttttatccgatgtgggacatataa 137  Q
    ||||||||||||||||||||||||    
T  70397 ttttatccgatgtgggacatataa 70420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 3669837 - 3669690
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agat 98  Q
    |||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||        ||| |||||||||||||| || |    
T  3669837 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggt 3669738  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    |||||||||| ||| ||||||| ||||||||||||||||  |||||||    
T  3669737 gttcaacctttactattttatctgatgtgggacatataactcacactt 3669690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 25561725 - 25561790
Alignment:
Q  73 ggcaatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||||||| |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  25561725 ggcaatgggtactcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataa 25561790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 45122070 - 45122220
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttca 103  Q
    ||||||||| |||||||  ||||||| ||||| ||| ||||||||||| ||||||||||||  ||||        ||| |||||||||||| | ||||||    
T  45122070 atcgaggctagaacaaccccacaagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttca 45122169  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaa 154  Q
    ||||| ||| |||||||||||||| |||||||||  ||||||| |||||||    
T  45122170 acctttactattttatccgatgtgagacatataactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 147962 - 147819
Alignment:
Q  16 gaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata-gatgttcaaccttcactct 114  Q
    |||||| |||||||  ||||||| ||||| ||| ||||||||||| ||||||||||||||||| |||  | |   ||||| | |||||||| || ||| |    
T  147962 gaggctagaacaactgcacaagtaagagagacaccacactcttacccaaaaccttaaggcaataggt-ttatgggttatatgttgttcaacatttacttt 147864  T
Q  115 tttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||| ||||||||||||||||  ||||||| ||||||||||||    
T  147863 tttatcagatgtgggacatataactcacacttgcacacaacaaca 147819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 6876866 - 6877031
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||| ||||||   ||||| ||| ||||||||||| ||||||| |||| |||||        |||| ||||| |||||    
T  6876866 accgtccacatcgaggctagaacaaccacacaaacaagagaaacaccacactcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttata 6876965  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggac-atataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||| |||||||||||||||||| ||||||  ||||||| ||||||||||||    
T  6876966 aggtgttcaacctttacttttttatccgatgtgggactatataactcacacttgcacacaacaaca 6877031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 20870577 - 20870718
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||||||||||| ||| | ||||||| |||||||  ||||| ||| ||||||||||  ||||| |||||||||        |||||||||||||||||||    
T  20870577 accgtccatatcaaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttata 20870676  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatata 136  Q
     ||||||||||||| ||| ||||||| ||||||| |||||||    
T  20870677 agatgttcaacctttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 25561901 - 25561985
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||  |||||||  | ||||||||||    
T  25561901 atgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttgtagacaacaacaa 25561985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 9482606 - 9482750
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 93  Q
    |||||||||| ||||||||| |||||||  ||||||  ||||| | | |||||||||| |||||| ||| |||||||||||        |||||||||||    
T  9482606 gaaccgtccacatcgaggctagaacaaccgcacaagcaagagagataccacactcttatacaaaatctttaggcaatgggtttatgggtcctcttactta 9482705  T
Q  94 ta-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    || | ||||||||||| |||||||||||| |||||| ||||||||    
T  9482706 taaggtgttcaacctttactcttttatcccatgtggaacatataa 9482750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 30441236 - 30441084
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat---- 94  Q
    ||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||||||||        ||||||||||||        
T  30441236 gtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataatt 30441137  T
Q  95 -agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     || ||||||||||| ||| ||||| ||||||||||||||||||  |||||||    
T  30441136 aaggtgttcaacctttactattttagccgatgtgggacatataactcacactt 30441084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 30359427 - 30359260
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 93  Q
    ||||| |||| || ||||||  ||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||| ||||||        |||||| ||||    
T  30359427 gaaccatccacattgaggctaaaacaacatcacaagaaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgctta 30359328  T
Q  94 ta-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    || | |||||||| || |||||||||||||||||| |||||||||  |||||||  ||||||||||||    
T  30359327 taaggtgttcaacatttactcttttatccgatgtgagacatataactcacacttgtacacaacaacaa 30359260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 34835363 - 34835221
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||| | ||||||||| ||| ||| |||||||  ||||  ||| ||||||||||| |||||| |||||||||||        ||||||||||||||||    
T  34835363 accgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttata 34835264  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
     | ||||||||||| ||| ||||||| ||||||||||||||||    
T  34835263 aggtgttcaacctttactattttatcggatgtgggacatataa 34835221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 45121663 - 45121797
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat-aga 97  Q
    ||||| ||||||||| |||||||  || |||| ||||| | ||||||||||||| ||||||||||||||         |||| ||||||||||||| ||     
T  45121663 gtccacatcgaggctagaacaaccccataagtaagagagatatcacactcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataagg 45121762  T
Q  98 tgttcaaccttcactcttttatccgatgtgggaca 132  Q
    || |||||||| |||||||||||||||||||||||    
T  45121763 tgatcaacctttactcttttatccgatgtgggaca 45121797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 33113390 - 33113535
Alignment:
Q  23 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactc 113  Q
    ||||||| |||| ||  ||||| ||| ||||||||||| ||||| ||||||||||||        |||||||||||||||| || |||||||||| |||     
T  33113390 gaacaaccacactagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttacta 33113489  T
Q  114 ttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||| ||||||||||  || ||||  |||||||||||    
T  33113490 ttttatccgatgtaggacatataactcaaacttgtacacaacaaca 33113535  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 41129142 - 41129066
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg 80  Q
    |||||||| ||||||| ||||||||| |||||||| ||||| ||| ||||||| ||| |||||||||||| ||||||    
T  41129142 accgtccacatcgaggtttgaacaaccacacaagtaagagagacaccacactcatacccaaaaccttaagacaatgg 41129066  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 43274864 - 43274948
Alignment:
Q  77 atgggtcctcttacttatag-atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    |||||||||||||||||||  || ||||||||| ||||||||||| ||||||  ||||||||  |||||||| ||||||||||||    
T  43274864 atgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactcacacttatacacaacaacaa 43274948  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 1013874 - 1014026
Alignment:
Q  3 aaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttat 94  Q
    |||| |||| ||||||||| |||||||  ||||||| | ||| ||| ||||||||||| ||||||  ||||||||||        |||||||||||||||    
T  1013874 aaccatccacatcgaggctagaacaaccgcacaagtaaaagagacaacacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttat 1013973  T
Q  95 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    | | |||||||| || ||| ||||||||||||||| ||||||||  |||||||    
T  1013974 agggtgttcaacttttactattttatccgatgtggaacatataactcacactt 1014026  T

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Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 1514002 - 1514061
Alignment:
Q  79 gggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||    
T  1514002 gggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataa 1514061  T

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Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 5916021 - 5915946
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||    
T  5916021 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 5915946  T

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Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 8794180 - 8794101
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||| |||||||||| || | |||||||||||||||| |||||||||  |||||||  |||||||||||    
T  8794180 gtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaacaaca 8794101  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 8918849 - 8918932
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | ||||||||||| |||||  |||| |||||||||||| |||  ||||||| ||||||||||||    
T  8918849 atgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactcacacttgcacacaacaaca 8918932  T

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Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 20995425 - 20995566
Alignment:
Q  9 ccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttatagatgttcaacctt 108  Q
    ||||||| ||||  || |||| |||||||||||||| ||| |||| |||||| |||||||||||||||||||| |     |  || || ||||||||||     
T  20995425 ccatatctaggccagagcaaccacacaagtgagagagacaccacattcttacccaaaaccttaaggcaatgggac-----aaataaag-tgttcaacctc 20995518  T
Q  109 cactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||| ||||||| |||||| |||||||||  ||||||| |||||||||    
T  20995519 cacttttttatctgatgtgagacatataactcacacttgcacacaaca 20995566  T

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Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 45122774 - 45122638
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gat 98  Q
    |||| ||||||||||||||||| |||||||  ||||| ||  ||||||| ||| |||||||||||| |||||        |||||||||||||||| | |    
T  45122774 tccacatcgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggt 45122675  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatat 135  Q
    |||||||||| ||| |||||||||||| ||| |||||    
T  45122674 gttcaacctttactattttatccgatgcgggccatat 45122638  T

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Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 9483189 - 9483320
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttactta 93  Q
    |||||||||| ||||||||| |||||||  ||| ||  | ||| ||| ||||||||||| |||||||||||| ||        |||||||||||||||||    
T  9483189 gaaccgtccacatcgaggctagaacaaccgcacgagcaaaagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttactta 9483288  T
Q  94 t-agatgttcaaccttcactcttttatccgat 124  Q
    | || ||||||||||| |||||||||||||||    
T  9483289 taaggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 18372785 - 18372859
Alignment:
Q  78 tgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacaca 151  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||    
T  18372785 tgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactttcaca 18372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 40518736 - 40518585
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||||||| || |||||| ||||||| |||||||  ||||  || |||||||||||| |||||||||||| ||        ||||||||||||| |||||    
T  40518736 accgtccacattgaggctagaacaaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttata 40518637  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| || |||| ||||||||||||||||  |||||||    
T  40518636 aggtgttcaacctttacttttctatctgatgtgggacatataactcacactt 40518585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 45123077 - 45122996
Alignment:
Q  77 atgggtcctcttacttatagatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||| ||||||||| || |||| |||||| ||| ||||||||||||||||||||||||  ||||||| |||||| |||||    
T  45123077 atgggtcatcttactta-aggtgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacagcaaca 45122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 41416256 - 41416317
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||    
T  41416256 atggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa 41416317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 9608818 - 9608738
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||| ||||||||||| | ||||||||||| ||| || |||||||| ||||||||||||  ||||||| |||||||||    
T  9608818 atgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 30359764 - 30359599
Alignment:
Q  3 aaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat 94  Q
    ||||||||| ||||| | | |||||||  || |||| ||||| ||| ||||||||||| ||||| |||||||  ||||||        ||||||||||||    
T  30359764 aaccgtccacatcgaagttagaacaaccgcataagtaagagagacaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttat 30359665  T
Q  95 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    | | |||||||| || ||||||||||| |||||| |||||||||  |||||||  |||||||||||    
T  30359664 aaggtgttcaacttttactcttttatctgatgtgagacatataactcacacttgtacacaacaaca 30359599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 41972231 - 41972151
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||| | ||||||| | ||||||||||| ||| || |||||||||||||||||||||  ||||||| |||||||||    
T  41972231 atgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 9309052 - 9308970
Alignment:
Q  77 atgggtcctcttacttatag-atgttcaaccttcactcttttatccgatgtg--ggacatataatccacacttacacacaaca 156  Q
    |||||||||||||||||||  ||||||||| || ||||||||||| ||||||  ||||||||||  ||||||| |||||||||    
T  9309052 atgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 45121999 - 45122070
Alignment:
Q  81 gtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacaca 151  Q
    ||||||||||||||| | ||||||||||| ||| |||||| |||||||||||||||||  ||||||| ||||    
T  45121999 gtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactcacacttgcaca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 18372342 - 18372416
Alignment:
Q  78 tgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacaca 151  Q
    |||||| ||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||    
T  18372342 tgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactttcaca 18372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 40518225 - 40518147
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||||||| ||| ||||| ||||||| |||||||  ||||| ||  ||||||||||| ||||||||||||||| |||||    
T  40518225 accgtccacatcaaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggt 40518147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 32640633 - 32640694
Alignment:
Q  97 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaac 158  Q
    |||||||||||| |||||||||||||||||| |||| ||||  ||||||| ||| |||||||    
T  32640633 atgttcaacctttactcttttatccgatgtgagacagataactcacacttccacgcaacaac 32640694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 37544496 - 37544658
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-ag 96  Q
    |||||| ||||||||| |||||||  ||||||| ||| | ||| ||||||||||| ||||||||||| | |        |||||||||||| ||||| |     
T  37544496 cgtccacatcgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataat 37544595  T
Q  97 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     ||||||||||| ||| |||||||||||||| ||| |||||  |||||||   ||||||||||    
T  37544596 gtgttcaacctttactattttatccgatgtgcgacttataactcacacttgtgcacaacaaca 37544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 4154751 - 4154831
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||| | ||||||| | |||||||||| |||| || |||| ||||||||||||||||  ||||||| |||||||||    
T  4154751 atgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacacttgcacacaaca 4154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 9507933 - 9507858
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||| ||||||||||||||||| | | ||| || ||| ||  ||||||||||| ||||||||||||| |||||||    
T  9507933 gtccacatcgaggcttgaacaaccatataagagatagagacgccacactcttacccaaaaccttaaggtaatgggt 9507858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 18371996 - 18372140
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttactta 93  Q
    ||||||| || || |||||| || ||||  |||||| |||||| ||| ||||||||||| ||||||||||| |||        |||| ||||||||||||    
T  18371996 gaaccgttcacattgaggctagagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttactta 18372095  T
Q  94 t-agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    | || ||||||||||| ||| ||||||  ||||||| ||||||||    
T  18372096 taaggtgttcaacctttactattttattggatgtggtacatataa 18372140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 20130513 - 20130462
Alignment:
Q  85 tcttacttatagatgttcaaccttcactcttttatccgatgtgggacatata 136  Q
    ||||||||| || |||||||| || |||||||||||||||||| ||||||||    
T  20130513 tcttacttaaaggtgttcaacttttactcttttatccgatgtgagacatata 20130462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 40579276 - 40579351
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||| | |||||||||||||    
T  40579276 gtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaatcctaaggcaatgggt 40579351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 6731953 - 6731907
Alignment:
Q  100 ttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataactcacactt 6731907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 40579591 - 40579661
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||| || ||  ||||||||| |||||||    
T  40579591 atgggtcctcttacttataaggtgttcaacctttactattttatccaatatgaaacatataattcacactt 40579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 5274907 - 5274854
Alignment:
Q  26 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||| ||||||| || ||| ||||||||||||||| ||||| ||||||||||||    
T  5274907 caacaacacaagcgatagagacatcacactcttactcaaaatcttaaggcaatg 5274854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 12284014 - 12283957
Alignment:
Q  16 gaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaag 73  Q
    |||||| ||||||| |||||||||||||| |||  |||||||||  ||||||||||||    
T  12284014 gaggctagaacaaccacacaagtgagagagacactacactcttatccaaaaccttaag 12283957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 18372692 - 18372757
Alignment:
Q  81 gtcctcttacttatagatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||  ||| ||||||||  |||||||    
T  18372692 gtcctcttacttataagtgttcaacctttactattttatccgaaatggaacatataaatcacactt 18372757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 18373020 - 18373077
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    ||||||||| ||||| | ||||||||||| ||| |||||||||| |||||||||||||    
T  18373020 gtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataa 18373077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 1014332 - 1014400
Alignment:
Q  79 gggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||||||||| | ||||||||||| ||| ||||||| |||||  |||||||||  |||||||    
T  1014332 gggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactcacactt 1014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 8919148 - 8919220
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca 76  Q
    |||||||| ||||| ||| ||||||| |||||||  | ||| ||| ||||||||||  |||||||||||||||    
T  8919148 accgtccacatcgaagctagaacaaccacacaagcaaaagagacaccacactcttatccaaaaccttaaggca 8919220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 9620682 - 9620755
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||| ||| |||| ||| |||| |||||||||||||| |||||| ||||||  | |||| ||||||||||||    
T  9620682 accgtccacatccaggcctgagcaaccacacaagtgagagagacatcaaactctt--ataaaatcttaaggcaatg 9620755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 12156704 - 12156740
Alignment:
Q  46 acatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  12156704 acatcacactcttacccaaaaccttaagacaatgggt 12156740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 31190161 - 31190007
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata-gatgttcaa 104  Q
    |||||| ||||||||| |||||||   |||||  ||||| ||| ||||||||||| |||||||||||||| ||||||||||| ||||||| | |||||||    
T  31190161 cgtccaaatcgaggctagaacaacccgacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtcctctaacttataaggtgttcaa 31190062  T
Q  105 ccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||| |||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  31190061 cctttactcttttatccgatgtgggacatatcactcacacttgcacacaacaaca 31190007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 39934963 - 39935101
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttat-agat 98  Q
    |||| ||||||||| ||||||| |||||||  ||||| ||||||||||||||| |||||| |||||||||||||        ||||||||||||| || |    
T  39934963 tccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggt 39935062  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  39935063 gttcaacctttactcttttatccgatgtaggacatataa 39935101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 54017820 - 54017982
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||| ||| ||||| ||| ||||||| |||||||| ||||| ||| ||||||||||| ||||||||||||||         ||| |||||||||||||||    
T  54017820 accgcccacatcgaagctagaacaaccacacaagtaagagagacaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttata 54017919  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
     | ||||||||||| ||||||||||||||||| ||||||||||  ||||||| ||||||||||    
T  54017920 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 54017982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 25739429 - 25739593
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||||||||| |||| ||  ||||||  ||||| || |||||||||||| |||||||| || ||||||        ||||||||||||||||    
T  25739429 accgtccacatcgaggctagaactaccgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttata 25739528  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     |||||||||| || ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  25739529 tgatgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 25739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 37726650 - 37726507
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttat-agatgttc 102  Q
    |||||||| ||||||||| ||||||| | |||||| ||| | || |||||||||||  |||||||| |||||||||| ||||||||||||| || | |||    
T  37726650 accgtccacatcgaggctagaacaactatacaagtaagataaacgtcacactcttatccaaaacctaaaggcaatggatcctcttacttataaggtattc 37726551  T
Q  103 aaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||| || ||| |||||||||||||| |||||||||  |||||||    
T  37726550 aacatttactattttatccgatgtgagacatataactcacactt 37726507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 42342392 - 42342556
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 95  Q
    |||||||| || |||||| |||||||  ||||||  ||||| || |||||||||||| |||||||||||| ||||||        |||||||||||||||    
T  42342392 accgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttata 42342491  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | |||| |||||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  42342492 aggtgttgaacctttactcttttatcggatgtgggacatataactcacacttgcacacaacaaca 42342556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 15773008 - 15772842
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||||||| | ||||||| |||||||  ||||| ||| ||||||||||  ||||||||||| ||||||        ||||||||||||||||    
T  15773008 accgtccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttata 15772909  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
     | |||||||| || ||||||||||||||| ||||||||||||  ||||||| ||||| ||||||||    
T  15772908 aggtgttcaacatttactcttttatccgatatgggacatataactcacacttgcacacgacaacaat 15772842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 35946676 - 35946510
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa--------tgggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||   ||||||  ||||| ||| |||||| |||| ||||||||||||||||        ||||||||||||||||||    
T  35946676 accgtccacatcgaggctagaacaattgcacaagcaagagagacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttata 35946577  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||  |||||||| ||||    
T  35946576 aggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaacagcaat 35946510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 15773346 - 15773182
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgag--agacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttata 95  Q
    |||||| ||||||| | ||||||| |||||||  ||  ||| ||||||||||||||| |||||| ||||||||||| |        ||||||||||||||    
T  15773346 cgtccacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttata 15773247  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     |||||||||| || |||||||||| |||||||||||||||||  ||||||| ||||||||||||    
T  15773246 agatgttcaacttttactcttttattcgatgtgggacatataactcacacttgcacacaacaaca 15773182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 32589857 - 32589693
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat- 94  Q
    |||||||| |||||| || ||||||| |||||||  ||||| ||||| ||||||||| |||||||||||||||||        ||||||||||||||||     
T  32589857 accgtccacatcgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 32589758  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    || ||||||||||| | | |||||||  |||||||||||||| | ||||||| |||||||||||||    
T  32589757 aggtgttcaacctttattattttatcttatgtgggacatatact-cacacttgcacacaacaacaa 32589693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 33803256 - 33803417
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| ||||||| ||||||| ||| || ||  ||||||||||| ||| ||||||| |||||||||        |||||||||||||    
T  33803256 accgtccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttata 33803355  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||| || |||||||||    
T  33803356 tggtgttcaacctttactattttatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 8328025 - 8327897
Alignment:
Q  37 gtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtg 127  Q
    |||||||| ||| ||||||||||| |||||||||||||||        |||||| |||||||||||| ||| |||| |||| ||||||||||||||||||    
T  8328025 gtgagagagacaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtg 8327926  T
Q  128 ggacatataatccacacttacacacaaca 156  Q
    ||||||||||  ||||||| |||||||||    
T  8327925 ggacatataactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 37990643 - 37990807
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| ||||||  |||||||  ||||| ||| ||||||||||| |||||||||||||||        ||| ||||||||||||||     
T  37990643 accgtccacatcgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttata 37990742  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || |||||||| || ||| ||||||||||||||| ||||||||  |||||||  |||||||||||    
T  37990743 aggtgttcaacatttactattttatccgatgtggaacatataactcacacttgtacacaacaaca 37990807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 37990981 - 37991145
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||| ||| |||  ||||| ||| ||||||||||| |||||||||||||| |||        ||||||||||||||||    
T  37990981 accgtccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttata 37991080  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||| |||||||| ||||| |||||||||  |||||||  |||||||||||    
T  37991081 aggtgttcaacctttactattttatccaatgtgagacatataactcacacttgtacacaacaaca 37991145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 43346795 - 43346959
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| || |||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||        ||| ||||||||||||    
T  43346795 accgtccacatagaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttata 43346894  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||| ||||||| ||||||||||||||||  |||||||  |||||||||||    
T  43346895 aggtgttcaacctttactattttatctgatgtgggacatataactcacacttgtacacaacaaca 43346959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 29644987 - 29645072
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    ||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||||||||   |||||| ||||||||||||||    
T  29644987 atgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttacacttgcacacaacaacaat 29645072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 52634816 - 52634665
Alignment:
Q  17 aggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtc-------ctcttacttata-gatgttcaacctt 108  Q
    ||||| |||||||  ||||||  ||||| || |||||||||||| |||||||||||||||||||||        |||||||||||| |  ||||||||||    
T  52634816 aggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtctcttacttataaggcgttcaacctt 52634717  T
Q  109 cactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
     ||| ||||||||||||||||||||||||  |||||||  ||||||||||||    
T  52634716 tactgttttatccgatgtgggacatataactcacacttgtacacaacaacaa 52634665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 12114566 - 12114731
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||| ||| |||| |||| |||||||  ||||||| ||||| ||| ||||||||||| |||||||||||| ||||||||        |||||||||||||    
T  12114566 accgaccacatcgtggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttata 12114665  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
     | ||||||||||| ||| || |||||||||||||| ||||||   |||||| |||||||||||||    
T  12114666 aggtgttcaacctttacttttctatccgatgtgggatatataacttacacttgcacacaacaacaa 12114731  T

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Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 54018202 - 54018366
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||| ||| ||||||||| ||||||| |||||||   |||| ||| ||||||||||| ||||||||||||||         |||||||||||||||||||    
T  54018202 accgcccacatcgaggctagaacaaccacacaagcatgagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttata 54018301  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||| ||| ||||||||||||||||  ||||||||||  ||||||| |||| |||||||    
T  54018302 aggtgttcaatctttactcttttatccgatgcaggacatataactcacacttgcacataacaaca 54018366  T

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Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 22304720 - 22304582
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-ga 97  Q
    ||||| |||||| || |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||        |||||||||||||||| |     
T  22304720 gtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataagg 22304621  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatata 136  Q
    | ||||||||| ||| |||||||||||||||||||||||    
T  22304620 tattcaacctttactattttatccgatgtgggacatata 22304582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 53117979 - 53118142
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt-------cctcttacttata- 95  Q
    ||||| || ||||| ||| ||||||| ||||  |||||||| |||  |||||||||| ||||| |||||||||||||||       ||||| |||||||     
T  53117979 accgttcacatcgatgctagaacaaccacacttgtgagagagacactacactcttacccaaaatcttaaggcaatgggttttgaatcctctcacttataa 53118078  T
Q  96 gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    | ||||||||||| ||||||||||||||| ||| ||||||||  ||||||| | ||||||||||    
T  53118079 ggtgttcaacctttactcttttatccgatatggaacatataactcacacttgcccacaacaaca 53118142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 32462904 - 32463069
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat- 94  Q
    ||||| || ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||||||        ||| ||||||||||     
T  32462904 accgtacacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttata 32463003  T
Q  95 agatgttcaacc-ttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || | ||||||| || |||||| |||||||||||||||||||||  |||||||  |||||||||||    
T  32463004 aggtattcaaccttttactcttctatccgatgtgggacatataactcacacttgtacacaacaaca 32463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 29644666 - 29644749
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||| |||||||||||| | ||||||||||| ||||||| ||||||||||||||||||||  ||||||| ||||||| ||||    
T  29644666 atgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacacttgcacacaaaaaca 29644749  T

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Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 45395661 - 45395819
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatggg--------tcctcttacttat-agat 98  Q
    |||| ||||||||| || ||||  ||||||||||||| ||| ||||||||||| |||||| ||||| |||||||        ||||||||||||| |  |    
T  45395661 tccacatcgaggctagagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgt 45395760  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    ||| |||||| |||||||||| |||||||||| ||||||   |||||| ||||||||||    
T  45395761 gtttaacctttactcttttattcgatgtgggatatataacttacacttgcacacaacaa 45395819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 53577418 - 53577353
Alignment:
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    |||||||||||||| ||| |||||||||||||| |||||||||  ||||||| |||||||||||||    
T  53577418 agatgttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaacaacaa 53577353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 11661639 - 11661525
Alignment:
Q  39 gagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||| ||| ||||||||||| ||||||||||||||       ||||||||||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  11661639 gagagagacaccacactcttacccaaaaccttaaggc-------cctcttacttataagatgtttaaccgttactattttatccgatgtgggacatataa 11661547  T
Q  138 tccacacttacacacaacaaca 159  Q
      |||||||  ||||| |||||    
T  11661546 ctcacacttgtacacaccaaca 11661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 39914397 - 39914241
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttca 103  Q
    ||||||||| |||||||  || |||||||||| ||| ||||||||||  |||||  ||||||||        ||||||||||||| ||||| | ||||||    
T  39914397 atcgaggctagaacaaccgcataagtgagagagacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttca 39914298  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||  ||| ||||||| |||||| |||||||||  ||||||| |||||||||||||    
T  39914297 acctctactgttttatctgatgtgagacatataactcacacttgcacacaacaacaa 39914241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 42342094 - 42342258
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||||||||||        ||| ||||||||||||||     
T  42342094 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttata 42342193  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||   || ||| || ||||||||||||||||||| |||||| |  ||||||| ||||||||||||    
T  42342194 aggcattgaacatttactcttttatccgatgtggaacatatgaatcacacttgcacacaacaaca 42342258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 22303663 - 22303741
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||||| | ||||||||| ||||||   ||||||| ||||| ||| ||||||||||| |||||||||||||||||||||    
T  22303663 accgtctacatcgaggctagaacaatcgcacaagtaagagaaacaccacactcttacccaaaaccttaaggcaatgggt 22303741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 41359769 - 41359847
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||| ||| ||||||||| ||||||| ||||||| |||||| ||  |||| |||||| |||||||||||||||||||||    
T  41359769 accgcccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggt 41359847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 51886634 - 51886564
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||| ||||||| |||||||||  |||||||    
T  51886634 atgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacactt 51886564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 43346701 - 43346640
Alignment:
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||| ||| ||||||||||||||||||||| ||  ||||||| ||||||||||||    
T  43346701 tgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaacaaca 43346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 46546371 - 46546407
Alignment:
Q  46 acatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||||||||||||||||||||||||||||||||||||    
T  46546371 acatcacactcttacacaaaaccttaaggcaatgggt 46546407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 11662096 - 11661941
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaa-ccttaaggcaatgggt--------cctcttacttata-gatgttc 102  Q
    ||||||||| ||||||| |||||| ||||||| ||| | ||||||||| ||||| |||||||||||| |||        ||||| |||| || | |||||    
T  11662096 atcgaggctagaacaaccacacaa-tgagagagacacctcactcttacccaaaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttc 11661998  T
Q  103 aaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||| |||||||||||| ||||||| ||| |||  |||||||||| |||||||||    
T  11661997 aacctttactcttttatccaatgtggggcatttaactcacacttacatacaacaaca 11661941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 25755463 - 25755384
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||| | | ||||||||| ||||||||||| |||||| |||||||||  |||||||  |||||||||||    
T  25755463 gtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaacaaca 25755384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 22303963 - 22304037
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||| ||||||||| ||||||| || ||||  ||||| ||| ||||||||||  |||||||||||||||||||||    
T  22303963 tccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttatccaaaaccttaaggcaatgggt 22304037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 47964544 - 47964683
Alignment:
Q  26 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-tgttcaaccttcactcttt 116  Q
    |||| |||||||||||||| ||  ||||||||||| |||||||||||||||        ||||||||||| ||||||| |  ||||||||| |||  ||     
T  47964544 caaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccacatttc 47964643  T
Q  117 tatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||| |||||||| ||  ||||||| |||||||||    
T  47964644 tatccgatgcgggacatacaactcacacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 50612541 - 50612607
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||||||| | ||||||| ||| ||| ||||||||||||||||||||||||  |||||||    
T  50612541 gtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacactt 50612607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 42584907 - 42584968
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||| |||||||||||||| | ||||||| ||| |||||| |||||||||||||||||||||    
T  42584907 atggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggacatataa 42584968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 49336772 - 49336857
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    ||||||||||||||||||| | || |||||||| ||| || ||||||||||| ||||| |||  |||||||  |||||||||||||    
T  49336772 atgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactcacacttgtacacaacaacaat 49336857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 21832432 - 21832508
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||||||||| | ||||||||||| ||| || ||||| |||||||||||||||  ||||||| |||| ||||    
T  21832432 gtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcacacttgcacataaca 21832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 22304297 - 22304249
Alignment:
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  22304297 tgttcaacctttactattttatccgatgtgggacatataactcacactt 22304249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 39336001 - 39336049
Alignment:
Q  31 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    ||||||| |||||| ||| ||||||||||| ||||||||||||||||||    
T  39336001 acacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg 39336049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 45901783 - 45901703
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcact-cttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||| | |||||||||||   | |||||||||||||||||||||||||  |||||||  |||||||||||    
T  45901783 gtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacacttgtacacaacaaca 45901703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 25317290 - 25317239
Alignment:
Q  26 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaa 77  Q
    |||| ||||||||||||||||||  ||||| |||| ||||||||||||||||    
T  25317290 caaccacacaagtgagagacacactacacttttacccaaaaccttaaggcaa 25317239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 1634441 - 1634491
Alignment:
Q  117 tatccgatgtgggacatataatccacacttacacacaacaacaattttcag 167  Q
    |||||||||||||||||||||  ||||||| |||||| |||||| ||||||    
T  1634441 tatccgatgtgggacatataactcacacttgcacacagcaacaactttcag 1634491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 3135458 - 3135536
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||||||| ||||||||| |||||||  ||||||  | ||| ||| ||||||||||   ||||||||||||||||||||    
T  3135458 accgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatctaaaaccttaaggcaatgggt 3135536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 39389143 - 39389073
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||||| || || | ||||||||||| ||| ||||||||||||| ||||||||||  |||||||    
T  39389143 atgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatataactcacactt 39389073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 3135158 - 3135219
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||| || ||||||||| | |||||||| || ||| ||||||||||||||||||||||||    
T  3135158 atgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatataa 3135219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 3135568 - 3135629
Alignment:
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||| || ||||||||||| || |||||||||||||  |||||||  |||||||||||    
T  3135568 tgttcaacttttactcttttatctgaggtgggacatataactcacacttgtacacaacaaca 3135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 7767403 - 7767476
Alignment:
Q  81 gtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacaca 153  Q
    ||||||||| ||||| | ||| ||||||| ||| || |||||||||||||||||||||  || |||||||||||    
T  7767403 gtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagacttacacaca 7767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 50612451 - 50612520
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaag 73  Q
    ||||||||  |||||| | ||||||| || ||||  ||||| ||||||||||||||| ||||||||||||    
T  50612451 accgtccacgtcgaggatggaacaaccactcaagcaagagagacatcacactcttacccaaaaccttaag 50612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 9240222 - 9240142
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||||||||||||| | |||||| | || |||  | |||||||||||| ||||||||  ||||||| |||||||||    
T  9240222 atgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaaca 9240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 12747878 - 12747918
Alignment:
Q  117 tatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    |||||||||||||||||||||  ||||||| ||||||||||    
T  12747878 tatccgatgtgggacatataactcacacttgcacacaacaa 12747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 17731954 - 17731986
Alignment:
Q  50 cacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||||||||| |||||||||||||||||||||    
T  17731954 cacactcttactcaaaaccttaaggcaatgggt 17731986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 19033185 - 19033217
Alignment:
Q  50 cacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||||||||| |||||||||||||||||||||    
T  19033185 cacactcttactcaaaaccttaaggcaatgggt 19033217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 32462651 - 32462727
Alignment:
Q  85 tcttacttata-gatgttcaaccttc-actcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||| | |||||||||||  ||||||| || |||||||||||||||||  |||||||  |||||||||||    
T  32462651 tcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacacttgtacacaacaaca 32462727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 33175749 - 33175829
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||||| |||||||||||| | ||||||||||| ||| || |||| |||||| |||||||||  |||||||  ||||||||    
T  33175749 atgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 54017598 - 54017630
Alignment:
Q  50 cacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||||||||| |||||||||||||||||||||    
T  54017598 cacactcttacccaaaaccttaaggcaatgggt 54017630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 7598754 - 7598606
Alignment:
Q  5 ccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttat-agatgttca 103  Q
    ||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||||  ||||| ||||||  |||||||||||||||||| || ||||||    
T  7598754 ccgtccacatcgatgcttgaacaaccacacaagtgagagagacaccacactcttaccaaaaacgttaaggttatgggtcctcttacttataaggtgttca 7598655  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacac 152  Q
    ||||| ||| ||||||| ||||||||||||||||  ||||||| |||||    
T  7598654 acctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 36178611 - 36178760
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-g 96  Q
    |||||| || |||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| |    
T  36178611 cgtccacatagaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataag 36178710  T
Q  97 atgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  36178711 gtgttcaacctttactattttatccgatgtgggacatataactcacactt 36178760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 28254262 - 28254410
Alignment:
Q  23 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactc 113  Q
    |||||||  |||||| |||||||||  ||||||||||| ||||||||||||||||||        |||||||||||||||| ||||||||||||| |||     
T  28254262 gaacaaccccacaagagagagacac--cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttactt 28254359  T
Q  114 ttttatccgatgtgggacatataatccacacttacacacaacaacaatttt 164  Q
    || |||||||||||||||||||||  ||||||  |||||||||||| ||||    
T  28254360 ttctatccgatgtgggacatataagtcacactggcacacaacaacattttt 28254410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 15880415 - 15880253
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-g 96  Q
    |||||| |||||||||  ||||||  ||||||  ||||| ||  ||||||||||| |||||||||||||||||||||        ||||||||||||| |    
T  15880415 cgtccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataag 15880316  T
Q  97 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     ||||||||||| ||||||||||||||||||| ||||||||  |||||||  |||||||||||    
T  15880315 gtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaaca 15880253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 6421539 - 6421375
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| |||||| || |||||||  ||||||  ||||| ||| ||||||||||| |||||||| ||||||||| ||        |||||||||||||    
T  6421539 accgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttata 6421440  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||||||||||||||||||||||||||||  |||||||   ||||||||||    
T  6421439 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtgcacaacaaca 6421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 37106342 - 37106191
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| ||||||   ||||||  ||||| ||| ||||||||||| ||||||||||||| |||||||        |||||||||||||    
T  37106342 accgtccacatcgaggctagaacaatcgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttata 37106243  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  37106242 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 37106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 962752 - 962591
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| ||||||| |||||||  ||||  ||| ||||||||||| |||||||||||| ||        ||||||||||| ||||||     
T  962752 accgtccacatcgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttata 962653  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    || ||||||||||| ||| || |||||||||||||||||||||  ||||||| || ||||||    
T  962652 aggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 38796622 - 38796789
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcaca--ctcttacacaaaaccttaaggca--------atgggtcctcttactta 93  Q
    |||||| | ||||||||||||||||| |||||||  | ||| ||  ||||  ||||||| |||||||||||||||        |||||||||||||||||    
T  38796622 accgtcgacatcgaggcttgaacaaccacacaagcaatagagacgccacatactcttacccaaaaccttaaggcattaggtttatgggtcctcttactta 38796721  T
Q  94 ta-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    || | ||||||||||| | | ||||||| ||||||||||||||||  ||||||| |||||||||||||    
T  38796722 taaggtgttcaacctttattgttttatcagatgtgggacatataactcacacttgcacacaacaacaa 38796789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 5542629 - 5542780
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| |||||| ||||||||||  ||||||  ||||| ||| |||||||||||  ||||||||||||||        ||||||||||||||||||     
T  5542629 accgtccacatcgagacttgaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttata 5542728  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    || ||||||||||| ||| |||||| |||| ||||||||||||  |||||||    
T  5542729 aggtgttcaacctttactattttattcgatatgggacatataactcacactt 5542780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 5543002 - 5543153
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| |||||||||||||||||  ||||||  | ||| ||| ||||||||||| ||||| |||||||||        |||| |||||||||||||     
T  5543002 accgtccacatcgaggcttgaacaaccgcacaagcaatagagacaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttata 5543101  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    || ||||||||||| ||| ||||||| ||||||||||||||||  |||||||    
T  5543102 aggtgttcaacctttactattttatcggatgtgggacatataactcacactt 5543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 31468797 - 31468914
Alignment:
Q  47 catcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttatagatgttcaaccttcactcttttatccgatgtgggacatataat 138  Q
    |||||||||||||| ||||||||||||||||||        ||||||||||  || |||| ||||||||| ||| ||||||||||||||||||||||||     
T  31468797 catcacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta--ta-agatattcaacctttactattttatccgatgtgggacatataac 31468893  T
Q  139 ccacacttacacacaacaaca 159  Q
     ||||||| ||||||||||||    
T  31468894 tcacacttgcacacaacaaca 31468914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 38796306 - 38796386
Alignment:
Q  80 ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||||||||| | |||||||| || ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  38796306 ggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaacaaca 38796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 14745674 - 14745822
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-ga 97  Q
    ||||| ||||||||| ||||||| ||||  |  ||||| ||  ||||||||||| |||||||||||||||||||||        ||||||||||||| |     
T  14745674 gtccacatcgaggctagaacaaccacacttgcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagg 14745773  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||||| ||| |||||||| |||||||||||||||  |||||||    
T  14745774 tgttcaacctttactattttatccaatgtgggacatataactcacactt 14745822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 31899511 - 31899594
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | |||||||| || ||| ||||||||||||||| ||||||||  ||||||| ||||||||||||    
T  31899511 atgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaacaaca 31899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 6421885 - 6421811
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat 78  Q
    |||||||| ||||||||  ||||||| |||||||| ||||| ||| ||||||||||| |||||||||||||||||    
T  6421885 accgtccacatcgaggccagaacaaccacacaagttagagagacaccacactcttacccaaaaccttaaggcaat 6421811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 15511501 - 15511661
Alignment:
Q  6 cgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttataga 97  Q
    |||||| |||||| || ||||||| |||||||  ||||| ||| ||||||||||| ||||| |||||| ||||||||        |||||||||||||      
T  15511501 cgtccacatcgagactagaacaaccacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataac 15511600  T
Q  98 -tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     ||||||||||| ||||||||||||| |||| |||||||||  | ||||| ||||||||||||    
T  15511601 gtgttcaacctttactcttttatccgttgtgtgacatataa--ctcacttgcacacaacaaca 15511661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 30313309 - 30313170
Alignment:
Q  26 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttatagatgttcaaccttcactctttt 117  Q
    |||| |||||||||||||| ||  ||||||||||| ||||| ||||||||||||        |||||||| |||||||  |||||||||| |||| || |    
T  30313309 caaccacacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataagtgttcaacctccacttttct 30313210  T
Q  118 atccgatgtgggacatataatccacacttacacacaacaa 157  Q
    |||||||||| |||||||||  ||| ||| ||||||||||    
T  30313209 atccgatgtgagacatataacacacgcttgcacacaacaa 30313170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 37106078 - 37105927
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||||||||| |||||||   |||||  ||||| ||| ||||||||||| ||||| ||||||||||||        ||||| ||||||||||    
T  37106078 accgtccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttata 37105979  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| |||||| |||||||||||||||||  |||||||    
T  37105978 aggtgttcaacctttactattttattcgatgtgggacatataactcacactt 37105927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 41283479 - 41283630
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||| ||||| ||||||| ||||||   ||||| ||  |||||||||||  |||||||||||||||||        ||||||||||||||||    
T  41283479 accgtccacatcaaggctagaacaaccacacaaacaagagagacgccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttata 41283578  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| ||||||||||| ||||||||||||  |||||||    
T  41283579 aggtgttcaacctttactattttatccgatatgggacatataactcacactt 41283630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 36785670 - 36785731
Alignment:
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||| ||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  36785670 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 36785731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 40734036 - 40733873
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc-------aatgggtcctcttacttat-a 95  Q
    |||||||| |||||| |||||||||| ||||||| |||| | ||| ||||||||||| |||||| |||||||        ||| | |||||||||||| |    
T  40734036 accgtccacatcgagacttgaacaaccacacaagcgagacagacaccacactcttacccaaaactttaaggctgtaggttatgagccctcttacttataa 40733937  T
Q  96 gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    | |||| || ||| |||||||||| |||||||||||||||||  |||||||  |||||| ||||    
T  40733936 ggtgttaaatctttactcttttattcgatgtgggacatataactcacacttgtacacaataaca 40733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 3672857 - 3672777
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||||||||| |||||| || ||||||| |||||| | ||||| ||| ||||||||||| ||||| |||||||||||||||    
T  3672857 gaaccgtccacatcgagactagaacaaccacacaattaagagagacaccacactcttacccaaaatcttaaggcaatgggt 3672777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 35580728 - 35580886
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt-------cctcttacttata- 95  Q
    |||||||| ||||||||| |||||||  |||||   ||||| ||  | ||||||||| |||||||||||||||||||||       ||||| |||||||     
T  35580728 accgtccacatcgaggctagaacaaccccacaaacaagagagacgccgcactcttacccaaaaccttaaggcaatgggtttatggtcctctcacttataa 35580827  T
Q  96 gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaa 154  Q
    | |||||||| || | | ||||||||||||||||||||||||  ||||||| |||||||    
T  35580828 ggtgttcaacatttattgttttatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 42514803 - 42514642
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||  ||||||| ||||| ||  ||||||||||| ||||| ||||||||         ||||||||||||||||||     
T  42514803 accgtccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttata 42514704  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    || ||||||||||| ||| || |||| ||||| ||||||||||  ||||||| || ||||||    
T  42514703 aggtgttcaacctttacttttctatctgatgtaggacatataactcacacttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 16542518 - 16542439
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||| ||||| | ||||||||||| ||| |||||||||||||||||| |||||  ||||||| ||||||||||||    
T  16542518 gtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactcacacttgcacacaacaaca 16542439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 36005887 - 36006050
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-ga 97  Q
    ||||| ||||||||| |||||||  ||||||  ||||| ||  |||||| |||| ||||||||||||||||||        |||||||||||||||| |     
T  36005887 gtccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagg 36005986  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatt 162  Q
    |||||||| || ||| || ||| |||||||||||||||||  |||||||  ||||||||||||||    
T  36005987 tgttcaacttttact-ttctattcgatgtgggacatataactcacacttgtacacaacaacaatt 36006050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 40733667 - 40733507
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gat 98  Q
    |||| |||||| ||||||| || ||||||| |||||| ||| ||||||||||| |||||| ||||||          ||||||||||||||||||| | |    
T  40733667 tccacatcgagacttgaactaccacacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggt 40733568  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||| || ||| ||||||| ||||||||||||||||  |||||||  |||||| ||||    
T  40733567 gttcaacatttacttttttatctgatgtgggacatataactcacacttgtacacaataaca 40733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 29676954 - 29676893
Alignment:
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||| |||||| ||||||||||||||||||||||||||||  ||||| | ||||||||||||    
T  29676954 tgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaaca 29676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 29873563 - 29873616
Alignment:
Q  26 caacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||| |||||||||||||| || |||||||||||| ||||||||||||||||||    
T  29873563 caaccacacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatg 29873616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 1769961 - 1769889
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacac 152  Q
    ||||||||||||||| | |||||||| || |||||||||||||||||| |||||||||  ||||||| |||||    
T  1769961 gtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 6713131 - 6712966
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaa-ccttaaggcaat--------gggtcctcttacttat 94  Q
    |||||||| ||||||||| ||||||   || |||  ||||| ||||||||||||||| ||||| |||||| |||||        ||||||||||||||||    
T  6713131 accgtccacatcgaggctagaacaatcccataagcaagagagacatcacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttat 6713032  T
Q  95 a-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    | | |||||||| || ||| |||||||||||||| |||||||||  |||||||  | |||||||||    
T  6713031 aaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttgtatacaacaaca 6712966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 7598382 - 7598225
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat- 94  Q
    ||||| || |||||||||||||||||  ||||||||||||| ||| || | |||||| ||||||||||||||         ||||||||||||| ||||     
T  7598382 accgttcacatcgaggcttgaacaaccgcacaagtgagagagacaccatattcttacccaaaaccttaaggctatgagtttatgggtcctcttatttata 7598283  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacac 152  Q
    || |||| |||||| ||| || ||| |||||| | ||||||||| ||||||| |||||    
T  7598282 aggtgttgaacctttacttttctattcgatgtagaacatataattcacacttgcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 28531399 - 28531479
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||| ||||||||||||| | |||||||||||  || || |||||||||||||||||||||  ||||||| |||||||||    
T  28531399 atgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcacacttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 37632682 - 37632762
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||||||||||||| | |||  |||||| ||| ||||||||||||| ||||||||||  ||||||| |||||||||    
T  37632682 atgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 3673222 - 3673147
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||| ||||||||| ||||||| |||| ||| ||||| ||||||||||||||  ||||| ||||| ||||||    
T  3673222 accgtccacatcgaggctagaacaaccacactagtaagagagacatcacactcttagccaaaatcttaaagcaatg 3673147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 6422261 - 6422186
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||| ||||||||| ||||||| |||||||  ||||| ||| |||||||||||  ||||||||||||| ||||||    
T  6422261 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggt 6422186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 6421352 - 6421294
Alignment:
Q  101 tcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||  |||||||||||    
T  6421352 tcaacctttactcttttatccgatgtgggacatataacttacacttgtacacaacaaca 6421294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 6421780 - 6421714
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaacctt 70  Q
    |||||||| ||||||||  ||||||| |||||||| ||||| ||| ||||||||||| |||||||||    
T  6421780 accgtccacatcgaggccggaacaaccacacaagttagagagacaccacactcttacccaaaacctt 6421714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 23346390 - 23346312
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||||||| ||| ||||| |||||||  ||||||  ||||| |||||||||||||||  ||||||||||||| ||||||    
T  23346390 accgtccacatctaggctagaacaaccgcacaagcaagagagacatcacactcttaccgaaaaccttaaggctatgggt 23346312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 31259701 - 31259789
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatg---tgggacatataatccacacttacacacaacaacaat 161  Q
    ||||||| ||||||||||| | |||| |||||| ||||||||||||||||   || |||||||||  | ||||||||||||||||||||    
T  31259701 atgggtcatcttacttataaggtgttgaacctttactcttttatccgatgatgtgagacatataactcgcacttacacacaacaacaat 31259789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 33731793 - 33731634
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttca 103  Q
    ||||||||| |||||||  || |||  ||||| ||| || |||||||| ||||||||||||||||| |||        ||||||||||||| | || |||    
T  33731793 atcgaggctagaacaaccgcataagcaagagagacaccatactcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctca 33731694  T
Q  104 accttcactcttttatccgatgtgggacatataa-tc-cacacttacacacaacaacaat 161  Q
    ||||| |||||||||||||||||| || |||||| || |||||||  |||||||||||||    
T  33731693 acctttactcttttatccgatgtgagatatataactcacacacttgaacacaacaacaat 33731634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 40163457 - 40163519
Alignment:
Q  76 aatgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||||| ||||||||||| | ||||||||||| ||| || |||||||||||||||||||||    
T  40163457 aatgggtcatcttacttataaggtgttcaacctttacttttctatccgatgtgggacatataa 40163519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 33561486 - 33561616
Alignment:
Q  35 aagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatg 125  Q
    |||||||||| | ||||||||||||| |||||||||||| ||        ||||||||||| ||||||| | |||| ||||| |||| || |||| ||||    
T  33561486 aagtgagagagatatcacactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatg 33561585  T
Q  126 tgggacatataatccacacttacacacaaca 156  Q
    ||| ||||||||  ||||||| |||||||||    
T  33561586 tggaacatataactcacacttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 40679633 - 40679794
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat- 94  Q
    |||||||| |||||| || |||||||  ||||||| ||||| ||  ||||||||||| ||||| ||||||||         |||||| |||||||||||     
T  40679633 accgtccacatcgagactagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttata 40679732  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    || ||||||||| | ||| || |||||||| ||||||||||||  |||| || |||||||||    
T  40679733 aggtgttcaacccttacttttctatccgatatgggacatataactcacatttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 14745344 - 14745440
Alignment:
Q  50 cacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    ||||||||||| |||||||||||||||||||||        |||| |||||| | ||||||||||| | ||| |||||| |||||||||||||||||    
T  14745344 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataa 14745440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 36178175 - 36178311
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||| | |||||||||  |||||| |||||||  |||||  || ||||||||||| ||||| |||||||||        |||||| | |||||||||     
T  36178175 accgtctacatcgaggctataacaaccacacaagcaagagaggcaccacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttata 36178274  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggac 131  Q
    || ||||||||||| ||| ||||||||||||||||||    
T  36178275 aggtgttcaacctttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 5367520 - 5367442
Alignment:
Q  85 tcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatt 162  Q
    ||||||||||| | |||||||||||  |||||||||||||| |||||||||||   |||||||  |||||||| |||||    
T  5367520 tcttacttataaggtgttcaacctttgctcttttatccgatctgggacatatatatcacacttgtacacaacatcaatt 5367442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 3673120 - 3673075
Alignment:
Q  114 ttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||| |||||||||||||||  ||||||| ||||||||||||    
T  3673120 ttttatccaatgtgggacatataactcacacttgcacacaacaaca 3673075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 37895111 - 37895143
Alignment:
Q  50 cacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||||||||| |||||||||||||||||||||    
T  37895111 cacactcttacccaaaaccttaaggcaatgggt 37895143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 41678401 - 41678445
Alignment:
Q  33 acaagtgagagacacatcacactcttacacaaaaccttaaggcaa 77  Q
    |||||||||||| || | |||||||||| ||||||||||||||||    
T  41678401 acaagtgagagagacgttacactcttactcaaaaccttaaggcaa 41678445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 36492221 - 36492395
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||  |||||||| |||| ||||        ||||||||||||||||    
T  36492221 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttata 36492320  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaattttcagaa 169  Q
     | ||||||||||| ||||||||||||||||||||||||||||  ||||||| || |||||||||||||| ||||    
T  36492321 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaacaacaatttttagaa 36492395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 15370253 - 15370086
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||   ||||||  ||||| ||| ||||||||||| ||||||||||||||         |||||||||||||||||||    
T  15370253 accgtccacatcgaggctagaacaatcccacaagcaagagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttata 15370154  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaatt 162  Q
     ||||||||||||| ||| |||||| |||||||||||||||||  ||||||| |||||||||||||||    
T  15370153 agatgttcaacctttactattttattcgatgtgggacatataactcacacttgcacacaacaacaatt 15370086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 32487543 - 32487397
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttatagatg 99  Q
    |||| ||||||||| ||||||| ||| |||  ||||| || |||||||||||| |||||||||||||||||||||        |||||||||||||| ||    
T  32487543 tccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataggtg 32487444  T
Q  100 ttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  32487443 ttcaacctttactattttatccgatgtgggacatataactcacactt 32487397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 3295349 - 3295509
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||        |||||||||||||||||    
T  3295349 accgtccacatcgaggctagaacaaccacacaagcaagagagacaacacactcttac-caaaaccttaaggcaattggtttatgggtcctcttacttata 3295447  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
     | ||||||||||| ||| ||||||||||||||| ||||||| | ||||||| ||||||||||    
T  3295448 aggtgttcaacctttactattttatccgatgtggaacatatact-cacacttccacacaacaa 3295509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 301095 - 300948
Alignment:
Q  14 tcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtcctcttacttat-agatgttcaaccttcact 112  Q
    ||||| |||||||| | |||||||  ||||| ||| |||||||||||  |||| ||||||||||||| | ||||||||||| || | ||||||||| |||    
T  301095 tcgagacttgaacagccacacaagcaagagagacaccacactcttaccaaaaatcttaaggcaatggattctcttacttataaggtattcaacctttact 300996  T
Q  113 cttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
     ||||||| |||||||||||||||| ||||||||  |||||| |||||    
T  300995 gttttatctgatgtgggacatataacccacacttgtacacaaaaacaa 300948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 40296319 - 40296483
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||||| ||||||||||||        |||||||||||||    
T  40296319 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttata 40296418  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | |||||||||||  || ||||||||||||||||||||||||  ||||||| |||||| |||||    
T  40296419 aggtgttcaaccttttctattttatccgatgtgggacatataactcacacttgcacacaccaaca 40296483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 41170777 - 41170646
Alignment:
Q  15 cgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaac 105  Q
    ||||||| ||||||| |||||||  ||| | ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| ||||||||||    
T  41170777 cgaggctagaacaaccacacaagcaagaaaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaac 41170678  T
Q  106 cttcactcttttatccgatgtgggacatataa 137  Q
    ||| ||| ||||||||||||||||||||||||    
T  41170677 ctttactattttatccgatgtgggacatataa 41170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 25328089 - 25327925
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata 95  Q
    |||||||| || |||||| ||||||| ||||  |  ||||| ||| ||||||||||| |||||||||||||||        |||||||||||||||||||    
T  25328089 accgtccacattgaggctagaacaaccacacttgcaagagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttata 25327990  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | |||||||| || ||| ||||||||||||| ||||||||||  |||||||| |||||||||||    
T  25327989 aggtgttcaacttttactgttttatccgatgtaggacatataactcacacttagacacaacaaca 25327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 26074159 - 26074311
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttat-agatgttca 103  Q
    ||||||| | || |||| |||| ||||||||| ||| ||||||||||| |||||||||||||||||||||        |||||||| ||| || ||||||    
T  26074159 atcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttca 26074258  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||| ||| |||||||||||||| |||||||||  ||||||| |||||||||    
T  26074259 acctttacttttttatccgatgtgtgacatataactcacacttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 6500604 - 6500454
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||        |||||||||||||||     
T  6500604 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttata 6500505  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    || ||||||||||| ||| ||||||||||||| ||||||||||  |||||||    
T  6500504 aggtgttcaacctttactattttatccgatgt-ggacatataactcacactt 6500454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 26074757 - 26074602
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttca 103  Q
    ||||||| | || |||| |||| ||||||||| ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||    
T  26074757 atcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttca 26074658  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||| ||||||||||||||| ||| ||||||||  |||||||  |||||| ||||    
T  26074657 acctttactcttttatccgatatggaacatataactcacacttgtacacaaaaaca 26074602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 18603121 - 18603275
Alignment:
Q  1 agaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactt 92  Q
    ||||||||||| ||||||||| |||| || |||||||  ||||| |   ||||||||||| |||||||||||||||||||||        ||||||||||    
T  18603121 agaaccgtccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 18603220  T
Q  93 ata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||| | ||||||||||| ||| ||||||| ||||||||||||||||  |||||||    
T  18603221 ataaggtgttcaacctttactattttatctgatgtgggacatataactcacactt 18603275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 26075247 - 26075332
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||  |||||||  |||||||||||||    
T  26075247 atgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttgtacacaacaacaat 26075332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 35150141 - 35150002
Alignment:
Q  23 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggtc-------ctcttacttata-gatgttcaaccttcactct 114  Q
    ||||||| |||| ||||||||| ||| |||||| |||| |||||||||||| |||||| |        |||||||||||| | ||||||||||| |||||    
T  35150141 gaacaaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggtctcttacttataaggtgttcaaccttgactct 35150042  T
Q  115 tttatccgatgtgggacatataatccacacttacacacaa 154  Q
    |||||||||||||||||||||||  ||||||| |||||||    
T  35150041 tttatccgatgtgggacatataactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 11417025 - 11417143
Alignment:
Q  48 atcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataat 138  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||| | ||||||||||| ||| ||||||||||||||| ||||||||     
T  11417025 atcacactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataa- 11417123  T
Q  139 ccacacttacacacaacaaca 159  Q
     | ||||| ||||||||||||    
T  11417124 -ctcacttgcacacaacaaca 11417143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 6224269 - 6224186
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||| |||||||||||||  |||||||  |||||||||||    
T  6224269 atgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcacacttgtacacaacaaca 6224186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 13415769 - 13415925
Alignment:
Q  9 ccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata-gatg 99  Q
    |||| |||||||| |||||||  ||||||  ||||| ||  ||||||||||| ||||||||||||| |||        ||||||||||||||||| | ||    
T  13415769 ccatttcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtg 13415868  T
Q  100 ttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||| |||  |||||||||||||||||||||||  ||||||| |||||||||    
T  13415869 ttcaacctttactaatttatccgatgtgggacatataactcacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 159
Target Start/End: Complemental strand, 299597 - 299479
Alignment:
Q  50 cacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatcc 140  Q
    |||||||||||||||||||||||||| |||        |||| ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  |    
T  299597 cacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 299498  T
Q  141 acacttacacacaacaaca 159  Q
    |||||| | ||||||||||    
T  299497 acacttgcgcacaacaaca 299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 38427697 - 38427560
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc--------aatgggtcctcttacttat-agat 98  Q
    |||| ||||||| | |||||||  ||||||||||||| || ||||||||||||||||||||||||| |        ||||||||||| ||||||| ||||    
T  38427697 tccacatcgaggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctc-tacttataagat 38427599  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||||||| ||| || ||||| |||||||||||||||    
T  38427598 gttcaacctttacttttctatccaatgtgggacatataa 38427560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 624352 - 624272
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||||||||| ||||||||| |||||||  ||||||||||||| ||| ||||||||||| |||||||| ||||| ||||||    
T  624352 gaaccgtccacatcgaggctagaacaaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggt 624272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 1028521 - 1028682
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||||||||| ||  |||||||||||  ||||||||||||  ||        |||||||||||||||||    
T  1028521 accgtccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttata 1028620  T
Q  96 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
     | |||||| |||| ||| || |||||||||||||||||||||  |||||||  ||||||||    
T  1028621 aagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 12662745 - 12662821
Alignment:
Q  85 tcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  ||||||| |||||||||||||    
T  12662745 tcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacaa 12662821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 42405602 - 42405764
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| |||||||  ||||||  ||||||||  ||||||||||| |||||||||||||||        ||| ||||| |||||| |     
T  42405602 accgtccacatcgaggctagaacaaccgcacaagcaagagacac--cacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgta 42405699  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || ||||||||||| ||| ||||||||||||| ||||||||||  |||||||  |||||||||||    
T  42405700 aggtgttcaacctttactattttatccgatgttggacatataactcacacttgtacacaacaaca 42405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 26074867 - 26074950
Alignment:
Q  77 atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||| ||||||||   ||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||||||||    
T  26074867 atgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaaca 26074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 35914920 - 35914839
Alignment:
Q  79 gggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||| ||||||||||| | ||||||||||| |||||||||||||||||| |||||||||  || ||||| |||||||||||    
T  35914920 gggtcttcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactcatacttatacacaacaaca 35914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 3295022 - 3295184
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-ga 97  Q
    ||||| |||||||||  |||||| ||||||   ||||| ||| ||||||| ||| |||||||| ||||||||||||        | ||||||||||| |     
T  3295022 gtccacatcgaggctacaacaaccacacaaccaagagagacaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataagg 3295121  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacactt--acacacaacaaca 159  Q
    ||||||||||| ||| ||||||||||||||||||||||| | |||||||  |||||||||||||    
T  3295122 tgttcaacctttactattttatccgatgtgggacatatact-cacacttgcacacacaacaaca 3295184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 6500976 - 6500826
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||| ||| |||  ||||||| ||||| ||| ||||||||||  |||||||||||||||        ||||||||| ||| ||||     
T  6500976 accgtccacatcgaggctagaataaccgcacaagtaagagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttata 6500877  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    || ||||||||||| ||| ||||||||||||| ||||||||||  |||||||    
T  6500876 aggtgttcaacctttactattttatccgatgt-ggacatataactcacactt 6500826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 27502040 - 27502191
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 95  Q
    |||||||| ||||||| | ||||||| |||||||  ||||| ||| |||||| ||||  |||| |||||||||||        |||||||||||||||||    
T  27502040 accgtccacatcgaggatagaacaaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttata 27502139  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | |||| |||||| ||| |||||||| |||||||||||||||  |||||||    
T  27502140 aggtgtttaacctttactattttatccaatgtgggacatataactcacactt 27502191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 34753028 - 34753171
Alignment:
Q  3 aaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat 94  Q
    ||||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||||||||||        ||||||| ||||||||||    
T  34753028 aaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttat 34753127  T
Q  95 -agatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
     || |||||||| || ||| || ||||| |||||||||||||||    
T  34753128 aaggtgttcaacttttacttttctatccaatgtgggacatataa 34753171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 36568577 - 36568732
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttat-agat 98  Q
    |||| ||||||| | ||||||| ||||||| ||||||| |  |||||||||||  ||||||||||||||||        ||||| ||| |||||| || |    
T  36568577 tccacatcgaggatagaacaaccacacaagagagagacgc--cacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggt 36568674  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||| || ||| || |||||||||||||||||||||  ||||||| |||||||||    
T  36568675 gttcaacttttacttttctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 42508681 - 42508604
Alignment:
Q  81 gtcctcttacttat-agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    |||||||||||||| ||||||| |||||| ||| || |||||||||||||| ||||||| |||||||  |||||||||    
T  42508681 gtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacacttgtacacaacaa 42508604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 41632855 - 41632775
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||||||||||||| | ||||||||||| ||| || ||||||||||| |||||||||   |||||| |||||||||    
T  41632855 atgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 623960 - 623901
Alignment:
Q  16 gaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggc 75  Q
    |||||| |||||||  ||||||||||||| ||| ||||||||||| ||||||||||||||    
T  623960 gaggctagaacaaccccacaagtgagagagacaccacactcttactcaaaaccttaaggc 623901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 26590912 - 26590986
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca 76  Q
    ||||| |||| ||||||| | ||||||| |||| ||||||||| ||  ||||||||||| |||||||||||||||    
T  26590912 gaaccatccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggca 26590986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 35150786 - 35150737
Alignment:
Q  110 actcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||| |||||||||||||||||  ||||||| ||||||||||||    
T  35150786 actcttttattcgatgtgggacatataactcacacttgcacacaacaaca 35150737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 35151077 - 35151028
Alignment:
Q  110 actcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||| |||||||||||||||||  ||||||| ||||||||||||    
T  35151077 actcttttattcgatgtgggacatataactcacacttgcacacaacaaca 35151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 33747927 - 33747783
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 93  Q
    |||||||||| ||| ||||| |||||||  || |||  ||||| ||| ||||||||||  ||||| |||||||||||| ||        |||||||||||    
T  33747927 gaaccgtccacatcaaggctagaacaaccgcataaggaagagagacaccacactcttatccaaaatcttaaggcaatgagtttatggatcctcttactta 33747828  T
Q  94 taga-tgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    || | | || |||||| ||| ||||||||||||||||||||||||    
T  33747827 taaagtatttaacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 15370556 - 15370478
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    |||||||| ||||||||| |||||||  |||||   ||||| ||  ||||||||||| |||||||||||||| ||||||    
T  15370556 accgtccacatcgaggctagaacaaccccacaaacaagagagacgccacactcttacgcaaaaccttaaggctatgggt 15370478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 36522269 - 36522319
Alignment:
Q  32 cacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt 82  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||  |||||||    
T  36522269 cacaagtgagagagacaccacactcttacccaaaaccttaagataatgggt 36522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 9498739 - 9498800
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    ||||||||||||||||||| | ||||||||||| ||| || |||| |||||| |||||||||    
T  9498739 atgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataa 9498800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 31509692 - 31509615
Alignment:
Q  81 gtcctcttacttataga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    ||||||| ||||||| | || ||||||| |||| || ||||||||||| |||||||||  ||||||| ||||||||||    
T  31509692 gtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaacaa 31509615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 36527126 - 36527174
Alignment:
Q  31 acacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||||||||| ||| ||||||||||  ||||| ||||||||||||    
T  36527126 acacaagtgagagagacagcacactcttatccaaaatcttaaggcaatg 36527174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 1950200 - 1950353
Alignment:
Q  15 cgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttata-gatgttcaac 105  Q
    ||||||| |||||||  ||||||| ||||| || |||||||||||| |||||||||||||||        |||| ||||||||||| || | ||||||||    
T  1950200 cgaggctagaacaaccgcacaagtaagagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaac 1950299  T
Q  106 cttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||| ||||||||||||||||||||||||||||  |||||||| || ||||||||    
T  1950300 ctttactcttttatccgatgtgggacatataactcacacttatacgcaacaaca 1950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 2579880 - 2580041
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-t 98  Q
    |||| ||||||||| |||||||  ||||||  ||||| ||| |||| |||||| ||||||||||||||         |||||||||||||||||||   |    
T  2579880 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgt 2579979  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  2579980 gttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaacaa 2580041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 10074371 - 10074528
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat-agat 98  Q
    |||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||| |||||||||||||||        |||||||||||||||||| || |    
T  10074371 tccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 10074470  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    |||||||||| ||| || ||||||||||||||| | |||  ||||||| |||||||||    
T  10074471 gttcaacctttacttttctatccgatgtgggacctctaactcacacttgcacacaaca 10074528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 29518657 - 29518506
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||| |||||||        |||||||||||||    
T  29518657 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata 29518558  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  29518557 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 29518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 29519074 - 29518923
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||| |||||||        |||||||||||||    
T  29519074 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata 29518975  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  29518974 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 29518923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 32741333 - 32741182
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||| |||||||        |||||||||||||    
T  32741333 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata 32741234  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  32741233 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 32741182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 2578447 - 2578610
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  | ||| ||| ||||||||||| |||||||||||||| ||||||        |||||||||||||    
T  2578447 accgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttata 2578546  T
Q  96 ga-tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||||||||||||| ||||||||||||||  |||||||  |||||||||||    
T  2578547 aagtgttcaacctttactcttttatccg-tgtgggacatataactcacacttgtacacaacaaca 2578610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 2377904 - 2377742
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gat 98  Q
    |||| ||||||||| ||| ||| || ||||  ||| | ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | |    
T  2377904 tccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggt 2377805  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||   ||||||||||||    
T  2377804 gttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaacaat 2377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 3409404 - 3409262
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-gatgttca 103  Q
    ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| ||||||||||||||||||        |||||||||||||||| | ||||||    
T  3409404 atcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttca 3409305  T
Q  104 accttcactcttttatccgatgtgggacatataatccacactt 146  Q
    ||||| ||| ||||||| ||||||||||||||||  |||||||    
T  3409304 acctttactattttatctgatgtgggacatataactcacactt 3409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 5832031 - 5832172
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca-------atgggtcctcttacttata- 95  Q
    |||||| | ||||||||| ||||||| |||||||| ||||| ||| |||||| |||| ||||| |||||||         |||||||||||||||||||     
T  5832031 accgtctacatcgaggctagaacaaccacacaagtaagagagacaccacacttttacccaaaatcttaaggggtggctttatgggtcctcttacttataa 5832130  T
Q  96 gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    | ||||||||||| |||||||||||| |||||||||||||||    
T  5832131 ggtgttcaacctttactcttttatccaatgtgggacatataa 5832172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 16455061 - 16454897
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaat--------gggtcctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||| |||||||||||||||||        ||||||| |||||||||    
T  16455061 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttata 16454962  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | ||||||||||| ||||||||||| ||||||||||| ||||  |||| ||  |||||||||||    
T  16454961 aggtgttcaacctttactcttttatctgatgtgggacacataactcacatttgtacacaacaaca 16454897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 2378280 - 2378129
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| ||||||| || ||||  ||||| ||| |||| ||||||  |||||||||||| |||||||        |||||||||||||    
T  2378280 accgtccacatcgaggctagaacaaccactcaagcaagagagacaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttata 2378181  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  2378180 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 2378129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 35210358 - 35210207
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 95  Q
    |||||||| ||||||||| || ||||  ||||||  | ||| ||| ||||||||||| |||||||||||||||||||        |||||||||||||||    
T  35210358 accgtccacatcgaggctagagcaaccgcacaagcaaaagaaacaccacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttata 35210259  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| |||||||||||||| |||||||||  |||||||    
T  35210258 aggtgttcaacctttactattttatccgatgtgagacatataactcacactt 35210207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 14748346 - 14748493
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata 95  Q
    |||||||| ||||||||| ||||||| |||||||  ||||||    ||||||||||| ||||||||||| ||||||        |||||||||| |||||    
T  14748346 accgtccacatcgaggctagaacaaccacacaagcaagagac----cacactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttata 14748441  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  14748442 aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 14748493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 9062438 - 9062518
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||  |||| ||| |||||| |||||    
T  9062438 gtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacatttatacacaataacaa 9062518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 16107823 - 16107667
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttat-agatgttca 103  Q
    ||||||||| || ||||  ||||||  ||||| ||| ||||||||||| |||||||||||||||||||        |||||||||||||| || |||| |    
T  16107823 atcgaggctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttta 16107724  T
Q  104 accttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    ||||| ||| ||||||||||||||  ||||||||  |||||||  ||||||||||||    
T  16107723 acctttacttttttatccgatgtgacacatataactcacacttgtacacaacaacaa 16107667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 1846902 - 1846751
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg--------gtcctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  | ||| ||| ||||||||||  |||||||||||||||||||        || ||||||||||||    
T  1846902 accgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttata 1846803  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     | ||||||||||| ||| |||||||||||||| |||||| ||| |||||||    
T  1846802 aggtgttcaacctttactattttatccgatgtgagacatagaattcacactt 1846751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 26544167 - 26544052
Alignment:
Q  40 agagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-tgttcaaccttcactcttttatccgatgtggga 130  Q
    ||||| ||||||||||||||| ||||||||||||||         |||||||||||||||||||   ||||||||||| ||| |||||||||||||||||    
T  26544167 agagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtggga 26544068  T
Q  131 catataatccacactt 146  Q
    |||||||  |||||||    
T  26544067 catataactcacactt 26544052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 593798 - 593879
Alignment:
Q  81 gtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| ||  ||||||| ||| || |||||||    
T  593798 gtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttgcactcagcaacaat 593879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 3058344 - 3058238
Alignment:
Q  40 agagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtggga 130  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||        |||| |||||||| | ||||||||||| ||| |||||||||||||||||    
T  3058344 agagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtggga 3058245  T
Q  131 catataa 137  Q
    |||||||    
T  3058244 catataa 3058238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 10073620 - 10073779
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||| ||| ||||||| |||| ||||||||| ||| ||||||||||| ||||| |||||| ||        |||| |||||||||||||     
T  10073620 accgtccacatcgatgctagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttata 10073719  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    || ||||||||||| |  ||||| |||||||||||||||||||   |||||| |||||||||    
T  10073720 aggtgttcaaccttta--cttttctccgatgtgggacatataactaacacttgcacacaaca 10073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 10911720 - 10911558
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    |||||||| ||||||||||||||||| |||  ||| ||||| ||||||||||||||  |||||| ||||||||        ||| ||||||||||||||     
T  10911720 accgtccacatcgaggcttgaacaacaacattagtaagagagacatcacactcttattcaaaactttaaggcaatgagtttatgagtcctcttacttata 10911621  T
Q  95 agatgttcaaccttcac-tcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    || ||||||||||| || | ||||||| ||||| ||||||||||  ||||||| || ||||||    
T  10911620 aggtgttcaacctttactttttttatctgatgtaggacatataactcacacttgcatacaaca 10911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 10073995 - 10074156
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttat- 94  Q
    ||||||||  |||||||| ||||||| | | ||| |||||| ||| |||||| |||| |||||||||||||||        ||||||||||||||||||     
T  10073995 accgtccacgtcgaggctagaacaaccaaataagcgagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 10074094  T
Q  95 agatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaaca 156  Q
    || |||||||| || ||| || |||||||||||||| ||||||  ||| ||| |||||||||    
T  10074095 aggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttgcacacaaca 10074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 32460629 - 32460726
Alignment:
Q  49 tcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataa 137  Q
    |||||||||||| |||||||||||||||||||||        ||||||||||||| | ||||||||||| ||| |||||| |||||||||||||||||    
T  32460629 tcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataa 32460726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 12085047 - 12085114
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgg 80  Q
    ||||||||| ||||||| |||||||||||||| ||  ||||||||||| |||||||||||||| ||||    
T  12085047 atcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggccatgg 12085114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 16108136 - 16108053
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | |||||||| || ||||||||||| ||||||| ||||||||  |||||||  |||||||||||    
T  16108136 atgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaacaaca 16108053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 16454729 - 16454565
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||  ||||||||||  ||||| |||||||||||||||        |||||||||||||    
T  16454729 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttata 16454630  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
     | |||||||| || | ||||||||| ||||||||||| ||||  |||||||  |||||||||||    
T  16454629 aggtgttcaacttttattcttttatctgatgtgggacacataactcacacttgtacacaacaaca 16454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 3409814 - 3409663
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata 95  Q
    |||||||| ||||||||| |||||||  ||||||  ||||| ||| ||||||||||| |||||  | ||||||||||||        |||||||||||||    
T  3409814 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttata 3409715  T
Q  96 -gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
     |||||||||| || ||| ||||||| ||||||| ||||||||  |||||||    
T  3409714 agatgttcaacttttactattttatctgatgtggtacatataactcacactt 3409663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 12071695 - 12071765
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaagg 74  Q
    ||||| || ||||||||| ||||||| |||||||||||||| ||  ||||||||||| |||||||||||||    
T  12071695 accgttcacatcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaagg 12071765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 2843709 - 2843634
Alignment:
Q  4 accgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    |||||||| ||||||||| ||||||| || ||||  ||||| | | ||||||||||| ||||||||||||||||||    
T  2843709 accgtccacatcgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaaggcaatg 2843634  T

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Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 3415593 - 3415470
Alignment:
Q  23 gaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttcaaccttcactc 113  Q
    |||||||  ||||||  ||||| ||| |||||||||||  ||||||||||||||||||||        ||||||||||||| | ||||||||||| |||     
T  3415593 gaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttacta 3415494  T
Q  114 ttttatccgatgtgggacatataa 137  Q
    ||||||  ||||||||||||||||    
T  3415493 ttttatgtgatgtgggacatataa 3415470  T

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Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 2579212 - 2579273
Alignment:
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||| || ||||||||||||||||||||||||||||   ||||||  |||||||||||    
T  2579212 tgttcaacttttactcttttatccgatgtgggacatataactaacacttgtacacaacaaca 2579273  T

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Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 1127505 - 1127372
Alignment:
Q  13 atcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gatgttca 103  Q
    ||||||| | || |||| ||| |||| ||||| ||  ||||||||||| ||||||||||||| |||||||        ||||||||||||| | ||||||    
T  1127505 atcgaggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttca 1127406  T
Q  104 accttcactcttttatccgatgtgggacatataa 137  Q
    ||||| ||| ||||| ||||||||||| ||||||    
T  1127405 acctttactattttacccgatgtgggatatataa 1127372  T

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Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 12092514 - 12092647
Alignment:
Q  32 cacaagtgagagacacatcacactcttacacaaaaccttaaggca--------atgggtcctcttacttataga-tgttcaaccttcactcttttatccg 122  Q
    ||||||||||||| ||| |||| |||||| |||||||||||||||        |||| |||||| ||||||| | || ||||||| |||| || ||||||    
T  12092514 cacaagtgagagagacaccacagtcttactcaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctccacttttctatccg 12092613  T
Q  123 atgtgggacatataatccacacttacacacaaca 156  Q
    ||||||||||| |||  ||| ||| |||||||||    
T  12092614 atgtgggacatctaacacacccttgcacacaaca 12092647  T

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Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 6999881 - 6999964
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||| ||||||||| |||| | |||||||| || ||| ||||||||||||| ||||||||||  |||||||| |||||| ||||    
T  6999881 atggatcctcttacatataaggtgttcaacttttacttttttatccgatgtaggacatataactcacacttatacacaataaca 6999964  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 2579494 - 2579571
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg 79  Q
    ||||| |||| ||||||| | ||||||| |||||||  ||||| ||| || ||| |||| ||||||||||||||||||    
T  2579494 gaaccatccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatg 2579571  T

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Target: scaffold0702 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 522 - 684
Alignment:
Q  8 tccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttacttata-gat 98  Q
    |||| ||||||||| ||| ||| || ||||  ||| | ||| ||||||||||| |||||||||||||||||||||        ||||||||||||| | |    
T  522 tccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggt 621  T
Q  99 gttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||   ||||||||||||    
T  622 gttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaacaat 684  T

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Target: scaffold0702; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 230 - 297
Alignment:
Q  80 ggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacactt 146  Q
    |||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  230 ggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 297  T

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Target: scaffold0391 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 1108 - 1274
Alignment:
Q  2 gaaccgtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatgggt--------cctcttactta 93  Q
    |||||||||| ||||||||| ||||||| ||| ||   ||||| ||| || |||||||| |||||||||||||||||||||        ||| || ||||    
T  1108 gaaccgtccacatcgaggctagaacaaccacataaacaagagagacaccatactcttacccaaaaccttaaggcaatgggtttatgagtcctttttctta 1207  T
Q  94 ta-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    || | ||||||||||| |||||||||||| |||||||||||||||  |||||||  |||||||||||    
T  1208 taaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgtacacaacaaca 1274  T

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Target: scaffold0391; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 3091 - 3153
Alignment:
Q  97 atgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||| | ||||||||||||    
T  3091 atgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaaca 3153  T

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Target: scaffold0734 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 5850 - 5767
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||||||||| |||||||||  ||||||| ||||||||||||    
T  5850 atgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaacaaca 5767  T

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Target: scaffold0734; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 5469 - 5384
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaat 161  Q
    ||||| ||||||||||||| | ||||||||||| ||| ||||||||||||| ||||||||||  ||||||| ||||||||||||||    
T  5469 atgggccctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacacaacaacaat 5384  T

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Target: scaffold0078 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 5430 - 5349
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaa 157  Q
    ||||||||||||||||||| | ||||||||||| ||| || |||||||||||| ||||||||  ||||||| ||||||||||    
T  5430 atgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcacacttgcacacaacaa 5349  T

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Target: scaffold0078; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 5133 - 4971
Alignment:
Q  7 gtccatatcgaggcttgaacaacgacacaagtgagagacacatcacactcttacacaaaaccttaaggcaatg--------ggtcctcttacttata-ga 97  Q
    ||||| ||||||||| || ||||  || ||| |||||| ||| ||||||||||| ||||||| ||||||||||        |||| | ||||||||| ||    
T  5133 gtccacatcgaggctagagcaaccgcataagcgagagagacaccacactcttacccaaaaccataaggcaatgagtttatgggtctttttacttataaga 5034  T
Q  98 tgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaacaa 160  Q
    | || |||||| ||| || | ||||||||| |||||||||| ||||||| |||||||||||||    
T  5033 tattaaacctttactgttctctccgatgtgagacatataattcacacttgcacacaacaacaa 4971  T

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Target: scaffold0171 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 17541 - 17624
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||| | | ||||||||||| ||| ||||||| |||||| |||||||||  ||||||| ||||||||||||    
T  17541 atgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaacaaca 17624  T

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Target: scaffold0504 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 10196 - 10279
Alignment:
Q  77 atgggtcctcttacttata-gatgttcaaccttcactcttttatccgatgtgggacatataatccacacttacacacaacaaca 159  Q
    ||||||||||||||||||| | |||||||| || ||  |||||||||||||| |||||||||  |||||||   ||||||||||    
T  10196 atgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttgtgcacaacaaca 10279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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