View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16495_high_12 (Length: 272)
Name: NF16495_high_12
Description: NF16495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16495_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 40648635 - 40648398
Alignment:
| Q |
14 |
catcatctgagccgttaaatcgaaatcagacctgacacgtggcaatcatacaattatcttatttcgtgtgcacaaaccctcaaatcaaatcaaacataaa |
113 |
Q |
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| T |
40648635 |
catcatctgagccgttaaatcgaaatcagaccggacacgtggcaatcatacaattatcttatttcgtgtgcacaaaccctcaaatcaaatcaaacataaa |
40648536 |
T |
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| Q |
114 |
cgtctctcctactcctcctaaacagttctagatccttttccaaaaggccacaaactacttgtggtcacacacaaatccttctttctctcgttcggtgctc |
213 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
40648535 |
cgtctctcctactcctcctaaacagttctagatccttctccaaaaggccacaaactacttgtggtcacacaaaaatccttctttctctcgttcggtgctc |
40648436 |
T |
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| Q |
214 |
tgcaaaaggttcagaaaatggctgattggggtccggtg |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
40648435 |
tgcaaaaggttcagaaaatggctgattggggtccggtg |
40648398 |
T |
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