View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16496_high_3 (Length: 446)
Name: NF16496_high_3
Description: NF16496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16496_high_3 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 263 - 435
Target Start/End: Original strand, 14308727 - 14308899
Alignment:
| Q |
263 |
ttcaattaaatcttctatataatttactttgagctcattatcatgagtaatatctcttgaaatgttttaactgtttctaccaatttacatctaagataat |
362 |
Q |
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| T |
14308727 |
ttcaattaaatcttctatataatttactttgagctcattatcatgagtgatatctcttgaaatgttttaactgtttctaccaatttacatctaagataat |
14308826 |
T |
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| Q |
363 |
ctgaattattgttgttgtattagccagcacaaatgtatttgattgatttggtctgttgatagtattcttctca |
435 |
Q |
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| T |
14308827 |
ctgaattattgttgttgtattagccagcacaaatgtatttgattgatttggtctgttgatagtattcttctca |
14308899 |
T |
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