View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1649_high_3 (Length: 391)

Name: NF1649_high_3
Description: NF1649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1649_high_3
NF1649_high_3
[»] chr4 (21 HSPs)
chr4 (1-291)||(48065446-48065736)
chr4 (359-391)||(1562569-1562601)
chr4 (359-391)||(3968891-3968923)
chr4 (359-391)||(32696822-32696854)
chr4 (359-391)||(8810577-8810609)
chr4 (359-391)||(11546935-11546967)
chr4 (359-391)||(12241064-12241096)
chr4 (359-391)||(15522360-15522392)
chr4 (359-391)||(16019482-16019514)
chr4 (359-391)||(25725727-25725759)
chr4 (359-391)||(29407059-29407091)
chr4 (359-387)||(33776850-33776878)
chr4 (359-391)||(33820369-33820401)
chr4 (359-391)||(35824139-35824171)
chr4 (359-391)||(36812436-36812468)
chr4 (359-391)||(39881063-39881095)
chr4 (359-391)||(40755927-40755959)
chr4 (359-391)||(43358619-43358651)
chr4 (359-391)||(47998600-47998632)
chr4 (359-391)||(48649524-48649556)
chr4 (359-391)||(55595955-55595987)
[»] chr8 (13 HSPs)
chr8 (359-391)||(67194-67226)
chr8 (359-391)||(25830279-25830311)
chr8 (359-391)||(1248259-1248291)
chr8 (359-391)||(7376512-7376544)
chr8 (359-391)||(9048349-9048381)
chr8 (359-391)||(10644835-10644867)
chr8 (359-391)||(16808587-16808619)
chr8 (359-391)||(22767138-22767170)
chr8 (359-391)||(31806305-31806337)
chr8 (359-391)||(35937545-35937577)
chr8 (359-387)||(40719680-40719708)
chr8 (359-391)||(42620010-42620042)
chr8 (359-391)||(45253641-45253673)
[»] chr7 (7 HSPs)
chr7 (359-391)||(6822555-6822587)
chr7 (359-391)||(2756962-2756994)
chr7 (359-391)||(9055273-9055305)
chr7 (359-391)||(33212048-33212080)
chr7 (359-391)||(34108888-34108920)
chr7 (359-391)||(42584808-42584840)
chr7 (359-391)||(42640849-42640881)
[»] chr5 (8 HSPs)
chr5 (359-391)||(14321988-14322020)
chr5 (359-391)||(22098261-22098293)
chr5 (359-391)||(1293119-1293151)
chr5 (359-391)||(18695324-18695356)
chr5 (359-391)||(31708376-31708408)
chr5 (359-391)||(32873182-32873214)
chr5 (359-391)||(33393640-33393672)
chr5 (359-391)||(36416095-36416127)
[»] chr3 (18 HSPs)
chr3 (359-391)||(11335335-11335367)
chr3 (359-391)||(37894276-37894308)
chr3 (359-391)||(48944743-48944775)
chr3 (359-391)||(51032657-51032689)
chr3 (359-391)||(27162502-27162534)
chr3 (359-391)||(29573389-29573421)
chr3 (359-391)||(30251013-30251045)
chr3 (359-391)||(31017427-31017459)
chr3 (359-391)||(34628103-34628135)
chr3 (359-391)||(40159871-40159903)
chr3 (359-391)||(47988518-47988550)
chr3 (359-391)||(47997805-47997837)
chr3 (359-391)||(48007092-48007124)
chr3 (359-391)||(48287677-48287709)
chr3 (359-391)||(48649586-48649618)
chr3 (359-391)||(49761219-49761251)
chr3 (359-391)||(50745375-50745407)
chr3 (359-391)||(52963349-52963381)
[»] chr2 (10 HSPs)
chr2 (359-391)||(6336258-6336290)
chr2 (359-391)||(11980657-11980689)
chr2 (359-391)||(31635843-31635875)
chr2 (361-391)||(6639505-6639535)
chr2 (359-391)||(1052529-1052561)
chr2 (359-391)||(5031929-5031961)
chr2 (359-391)||(14797683-14797715)
chr2 (359-391)||(39737719-39737751)
chr2 (359-391)||(40874294-40874326)
chr2 (359-391)||(43356295-43356327)
[»] chr1 (14 HSPs)
chr1 (359-391)||(12999855-12999887)
chr1 (359-391)||(18541084-18541116)
chr1 (359-391)||(33076125-33076157)
chr1 (359-391)||(51848886-51848918)
chr1 (359-388)||(29877303-29877332)
chr1 (359-391)||(3606127-3606159)
chr1 (359-391)||(12708096-12708128)
chr1 (359-391)||(12713550-12713582)
chr1 (359-391)||(12717641-12717673)
chr1 (359-391)||(15182616-15182648)
chr1 (359-391)||(21433434-21433466)
chr1 (359-391)||(25989017-25989049)
chr1 (359-391)||(27810280-27810312)
chr1 (359-391)||(49020437-49020469)
[»] chr6 (11 HSPs)
chr6 (361-391)||(1376372-1376402)
chr6 (361-391)||(1384120-1384150)
chr6 (359-391)||(3049563-3049595)
chr6 (359-391)||(3552187-3552219)
chr6 (359-391)||(8778905-8778937)
chr6 (359-391)||(9188977-9189009)
chr6 (359-391)||(15666806-15666838)
chr6 (359-391)||(17835618-17835650)
chr6 (359-391)||(25127866-25127898)
chr6 (359-391)||(26391318-26391350)
chr6 (359-391)||(32729895-32729927)
[»] scaffold0184 (1 HSPs)
scaffold0184 (359-391)||(16627-16659)
[»] scaffold0078 (1 HSPs)
scaffold0078 (359-391)||(56185-56217)
[»] scaffold0049 (1 HSPs)
scaffold0049 (359-391)||(72202-72234)
[»] scaffold0009 (1 HSPs)
scaffold0009 (359-391)||(263728-263760)
[»] scaffold0003 (1 HSPs)
scaffold0003 (359-391)||(337124-337156)


Alignment Details
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 48065446 - 48065736
Alignment:
Q  1 cagagaaagaatgcaaagagttattagcactcggagaagataaagatgaccaataccaaaagcctaaggtggtaccaacaaccacagccccagaagttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48065446 cagagaaagaatgcaaagagttattagcactcggagaagataaagatgaccaataccaaaagcctaaggtggtaccaacaaccacagccccagaagttat 48065545  T
Q  101 tgtcctaagaaaatactcaaaatctctaaccctttcatcaccaccatttccggacccatcaaaagagctcaacggagaagaagacgaagacgtggagcgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48065546 tgtcctaagaaaatactcaaaatctctaaccctttcatcaccaccatttccggacccatcaaaagagctcaacggagaagaagacgatgacgtggagcgt 48065645  T
Q  201 tgtgattggctacacaacggccttatgttatgtcgtagagtctgttggaatcttcttccccaagaaaacaacatgctaaggtcgagtttag 291  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48065646 tgtgattggctacacaacggccttatgttatatcgtagagtctgttggaatcttcttccccaagaaaacaacatgctaaggtcgagtttag 48065736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 1562601 - 1562569
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  1562601 tgatatttgtacaaccattttctaacaactttt 1562569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 3968891 - 3968923
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  3968891 tgatatttgtacaaccattttctaacaactttt 3968923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 32696854 - 32696822
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  32696854 tgatatttgtacaaccattttctaacaactttt 32696822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 8810577 - 8810609
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  8810577 tgatatttgtacaaccattttcttacaactttt 8810609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 11546967 - 11546935
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||| ||||||||||||||||||||||||    
T  11546967 tgatatttttacaaccattttctaacaactttt 11546935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 12241064 - 12241096
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||| |||||||||||||||||    
T  12241064 tgatatttgtacaactattttctaacaactttt 12241096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 15522360 - 15522392
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||| ||||||||||||||||||||||||||    
T  15522360 tgatatatgtacaaccattttctaacaactttt 15522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 16019482 - 16019514
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||| ||||||||||||||||||    
T  16019482 tgatatttgtacaatcattttctaacaactttt 16019514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 25725759 - 25725727
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  25725759 tgatatttgtacaaccactttctaacaactttt 25725727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 29407091 - 29407059
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||| ||||    
T  29407091 tgatatttgtacaaccattttctaacaagtttt 29407059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 387
Target Start/End: Complemental strand, 33776878 - 33776850
Alignment:
Q  359 tgatatttgtacaaccattttctaacaac 387  Q
    |||||||||||||||||||||||||||||    
T  33776878 tgatatttgtacaaccattttctaacaac 33776850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 33820401 - 33820369
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||| |||||||||||||||||    
T  33820401 tgatatttgtacaactattttctaacaactttt 33820369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 35824171 - 35824139
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  35824171 tgatatttgtacaaccattttttaacaactttt 35824139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 36812468 - 36812436
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  36812468 tgatatttgtacaaccaatttctaacaactttt 36812436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 39881095 - 39881063
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||| ||||||||||||||||||    
T  39881095 tgatatttgtacaatcattttctaacaactttt 39881063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 40755927 - 40755959
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||| ||||    
T  40755927 tgatatttgtacaaccattttctaacaattttt 40755959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 43358619 - 43358651
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  43358619 tgatatttgtacaaccaatttctaacaactttt 43358651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 47998600 - 47998632
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  47998600 tgatatttgtacaaccattttgtaacaactttt 47998632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 48649524 - 48649556
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||| ||||||||||||||||||||||||    
T  48649524 tgatatttttacaaccattttctaacaactttt 48649556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 55595955 - 55595987
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  55595955 tgatatttgtacaaccaatttctaacaactttt 55595987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 67226 - 67194
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  67226 tgatatttgtacaaccattttctaacaactttt 67194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 25830311 - 25830279
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  25830311 tgatatttgtacaaccattttctaacaactttt 25830279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 1248259 - 1248291
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  1248259 tgatatttgtacaaccattttcttacaactttt 1248291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 7376512 - 7376544
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  7376512 tgatatttgtacaaccaatttctaacaactttt 7376544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 9048381 - 9048349
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||| |||||||||||||||||||||    
T  9048381 tgatatttgtataaccattttctaacaactttt 9048349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 10644867 - 10644835
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  10644867 tgatatttgtacaaccattttgtaacaactttt 10644835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 16808587 - 16808619
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||| |||||||||||||||||||||||    
T  16808587 tgatatttggacaaccattttctaacaactttt 16808619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 22767138 - 22767170
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  22767138 tgatatttgtacaaccattttctcacaactttt 22767170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 31806305 - 31806337
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||| ||||    
T  31806305 tgatatttgtacaaccattttctaacaattttt 31806337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 35937577 - 35937545
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  35937577 tgatatttgtacaaccattttgtaacaactttt 35937545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 387
Target Start/End: Complemental strand, 40719708 - 40719680
Alignment:
Q  359 tgatatttgtacaaccattttctaacaac 387  Q
    |||||||||||||||||||||||||||||    
T  40719708 tgatatttgtacaaccattttctaacaac 40719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 42620042 - 42620010
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||| |||||||||||||||||||    
T  42620042 tgatatttgtacatccattttctaacaactttt 42620010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 45253673 - 45253641
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  45253673 tgatatttgtacaaccattttcttacaactttt 45253641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 6822587 - 6822555
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  6822587 tgatatttgtacaaccattttctaacaactttt 6822555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 2756994 - 2756962
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  2756994 tgatatttgtacaaccaatttctaacaactttt 2756962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 9055273 - 9055305
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  9055273 tgatatttgtacaaccaatttctaacaactttt 9055305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 33212048 - 33212080
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||| ||||    
T  33212048 tgatatttgtacaaccattttctaacaattttt 33212080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 34108920 - 34108888
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||| ||||||||||||||||||||||||||    
T  34108920 tgatatatgtacaaccattttctaacaactttt 34108888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 42584808 - 42584840
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||| ||||||||||||||||||||||||||    
T  42584808 tgatatatgtacaaccattttctaacaactttt 42584840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 42640849 - 42640881
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||| |||||||||||||||||    
T  42640849 tgatatttgtacaactattttctaacaactttt 42640881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 14322020 - 14321988
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  14322020 tgatatttgtacaaccattttctaacaactttt 14321988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 22098261 - 22098293
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  22098261 tgatatttgtacaaccattttctaacaactttt 22098293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 1293151 - 1293119
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  1293151 tgatatttgtacaaccattttttaacaactttt 1293119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 18695324 - 18695356
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  18695324 tgatatttgtacaaccattttgtaacaactttt 18695356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 31708376 - 31708408
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  31708376 tgatatttgtacaaccattttataacaactttt 31708408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 32873214 - 32873182
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  32873214 tgatatttgtacaaccaatttctaacaactttt 32873182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 33393640 - 33393672
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  33393640 tgatatttgtacaaccattttctcacaactttt 33393672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 36416127 - 36416095
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||| ||||    
T  36416127 tgatatttgtacaaccattttctaacaattttt 36416095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 11335367 - 11335335
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  11335367 tgatatttgtacaaccattttctaacaactttt 11335335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 37894308 - 37894276
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  37894308 tgatatttgtacaaccattttctaacaactttt 37894276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 48944775 - 48944743
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  48944775 tgatatttgtacaaccattttctaacaactttt 48944743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 51032689 - 51032657
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  51032689 tgatatttgtacaaccattttctaacaactttt 51032657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 27162534 - 27162502
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  27162534 tgatatttgtacaaccattttgtaacaactttt 27162502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 29573421 - 29573389
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  29573421 tgatatttgtacaaccattttgtaacaactttt 29573389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 30251045 - 30251013
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||| ||||    
T  30251045 tgatatttgtacaaccattttctaacaattttt 30251013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 31017459 - 31017427
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||| ||||||||||||||||||    
T  31017459 tgatatttgtacaatcattttctaacaactttt 31017427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 34628135 - 34628103
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  34628135 tgatatttgtacaaccattttttaacaactttt 34628103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 40159903 - 40159871
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||| |||||||||||||||||    
T  40159903 tgatatttgtacaactattttctaacaactttt 40159871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 47988550 - 47988518
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||| |||||||||||||||||    
T  47988550 tgatatttgtacaactattttctaacaactttt 47988518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 47997837 - 47997805
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||| |||||||||||||||||    
T  47997837 tgatatttgtacaactattttctaacaactttt 47997805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 48007124 - 48007092
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||| |||||||||||||||||    
T  48007124 tgatatttgtacaactattttctaacaactttt 48007092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 48287677 - 48287709
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  48287677 tgatatttgtacaaccattttataacaactttt 48287709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 48649586 - 48649618
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  48649586 tgatatttgtacaaccactttctaacaactttt 48649618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 49761251 - 49761219
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||| ||||    
T  49761251 tgatatttgtacaaccattttctaacaattttt 49761219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 50745375 - 50745407
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||| ||||    
T  50745375 tgatatttgtacaaccattttctaacaattttt 50745407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 52963381 - 52963349
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  52963381 tgatatttgtacaaccattttttaacaactttt 52963349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 6336258 - 6336290
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  6336258 tgatatttgtacaaccattttctaacaactttt 6336290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 11980657 - 11980689
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  11980657 tgatatttgtacaaccattttctaacaactttt 11980689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 31635875 - 31635843
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  31635875 tgatatttgtacaaccattttctaacaactttt 31635843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 391
Target Start/End: Complemental strand, 6639535 - 6639505
Alignment:
Q  361 atatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||    
T  6639535 atatttgtacaaccattttctaacaactttt 6639505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 1052561 - 1052529
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  1052561 tgatatttgtacaaccattttttaacaactttt 1052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 5031929 - 5031961
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  5031929 tgatatttgtacaaccattttgtaacaactttt 5031961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 14797715 - 14797683
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  14797715 tgatatttgtacaaccaatttctaacaactttt 14797683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 39737751 - 39737719
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  39737751 tgatatttgtacaaccaatttctaacaactttt 39737719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 40874326 - 40874294
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  40874326 tgatatttgtacaaccattttttaacaactttt 40874294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 43356295 - 43356327
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  43356295 tgatatttgtacaaccaatttctaacaactttt 43356327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 12999887 - 12999855
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  12999887 tgatatttgtacaaccattttctaacaactttt 12999855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 18541116 - 18541084
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  18541116 tgatatttgtacaaccattttctaacaactttt 18541084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 33076125 - 33076157
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  33076125 tgatatttgtacaaccattttctaacaactttt 33076157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 51848886 - 51848918
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||||    
T  51848886 tgatatttgtacaaccattttctaacaactttt 51848918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Original strand, 29877303 - 29877332
Alignment:
Q  359 tgatatttgtacaaccattttctaacaact 388  Q
    ||||||||||||||||||||||||||||||    
T  29877303 tgatatttgtacaaccattttctaacaact 29877332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 3606159 - 3606127
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  3606159 tgatatttgtacaaccaatttctaacaactttt 3606127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 12708096 - 12708128
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||| |||||||||||||||||||||    
T  12708096 tgatatttgtagaaccattttctaacaactttt 12708128  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 12713550 - 12713582
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||| |||||||||||||||||||||    
T  12713550 tgatatttgtagaaccattttctaacaactttt 12713582  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 12717641 - 12717673
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||| |||||||||||||||||||||    
T  12717641 tgatatttgtagaaccattttctaacaactttt 12717673  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 15182648 - 15182616
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||| |||||||||||||||||    
T  15182648 tgatatttgtacaactattttctaacaactttt 15182616  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 21433466 - 21433434
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  21433466 tgatatttgtacaaccattttgtaacaactttt 21433434  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 25989049 - 25989017
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  25989049 tgatatttgtacaaccattttttaacaactttt 25989017  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 27810312 - 27810280
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  27810312 tgatatttgtacaaccaatttctaacaactttt 27810280  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 49020469 - 49020437
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  49020469 tgatatttgtacaaccattttttaacaactttt 49020437  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 391
Target Start/End: Original strand, 1376372 - 1376402
Alignment:
Q  361 atatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||    
T  1376372 atatttgtacaaccattttctaacaactttt 1376402  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 391
Target Start/End: Original strand, 1384120 - 1384150
Alignment:
Q  361 atatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||||||||||||||||||    
T  1384120 atatttgtacaaccattttctaacaactttt 1384150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 3049595 - 3049563
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||| ||||||||||||||||||    
T  3049595 tgatatttgtacaatcattttctaacaactttt 3049563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 3552219 - 3552187
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  3552219 tgatatttgtacaaccattttttaacaactttt 3552187  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 8778937 - 8778905
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  8778937 tgatatttgtacaaccattttttaacaactttt 8778905  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 9189009 - 9188977
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  9189009 tgatatttgtacaaccattttttaacaactttt 9188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 15666838 - 15666806
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  15666838 tgatatttgtacaaccattttctgacaactttt 15666806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 17835618 - 17835650
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    |||||||||||||||| ||||||||||||||||    
T  17835618 tgatatttgtacaacccttttctaacaactttt 17835650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 25127898 - 25127866
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  25127898 tgatatttgtacaaccattttgtaacaactttt 25127866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 26391350 - 26391318
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  26391350 tgatatttgtacaaccattttttaacaactttt 26391318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 32729895 - 32729927
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  32729895 tgatatttgtacaaccattttctgacaactttt 32729927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 16659 - 16627
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  16659 tgatatttgtacaaccattttgtaacaactttt 16627  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 56185 - 56217
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  56185 tgatatttgtacaaccattttgtaacaactttt 56217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 72234 - 72202
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||| |||||||||||    
T  72234 tgatatttgtacaaccattttgtaacaactttt 72202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 263760 - 263728
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||| |||||||||||||||    
T  263760 tgatatttgtacaaccactttctaacaactttt 263728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 337124 - 337156
Alignment:
Q  359 tgatatttgtacaaccattttctaacaactttt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  337124 tgatatttgtacaaccattttctgacaactttt 337156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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