View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16502_low_30 (Length: 228)
Name: NF16502_low_30
Description: NF16502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16502_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 30831383 - 30831173
Alignment:
| Q |
1 |
taattcattggttgatcttgcagaccttaggccaaggccatcttcctcagttgggagacatattttatgtcaagccattgtgcaaactttctgaatagtg |
100 |
Q |
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| T |
30831383 |
taattcattggttgatcttgcagaccttaggccaaggccatcttcctcagttgggagacatattttatgtcaagccattgtgcaaactttctgaatagtg |
30831284 |
T |
|
| Q |
101 |
atgtccccactccatatgaaactccctatcaattgcttgaaggagtatacgtactttccatcaataatatacttaaccaattgaactctacccataatgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |
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| T |
30831283 |
atgtccccactccatatgaaactccctatcaattgcttgaaggagtatacgtactttccatcaataat-tactgaaccaattgaactctacccatgatgg |
30831185 |
T |
|
| Q |
201 |
ttaacaaagatt |
212 |
Q |
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|||||||||||| |
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| T |
30831184 |
ttaacaaagatt |
30831173 |
T |
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