View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16503_high_10 (Length: 259)
Name: NF16503_high_10
Description: NF16503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16503_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 35019219 - 35018974
Alignment:
| Q |
1 |
ttcatcattgtattagttgcctaaggttatccacatttcttaaaaaataaagttggctaaatggtcaaatccttataa-------tgctaacttaaaggc |
93 |
Q |
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| T |
35019219 |
ttcatcattgtattagttgcctaaggttatccacatttcttaaaaaataaagttggctaaatggtcaaatccttataaattataatgctaacctaaaggc |
35019120 |
T |
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| Q |
94 |
aaaatgtgaacaagttatggatttatgatgtttatatattcacgttgcatgtcaagctatatgaactcaatttgtattacttaaatataaagtagctttc |
193 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
35019119 |
aaaatgtgaacaagttatggatttatgatgttcatatattcacgttgcatgtcaagctatatgaactc-atttgtattacttaaatataaagtagctttc |
35019021 |
T |
|
| Q |
194 |
agaaagaaagnnnnnnngacatcatacatctttgtatttatttattctattcat |
247 |
Q |
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| T |
35019020 |
aggaaaaaa-------agacatcatacatctttgtatttatttattctattcat |
35018974 |
T |
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