View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16503_low_20 (Length: 319)

Name: NF16503_low_20
Description: NF16503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16503_low_20
NF16503_low_20
[»] chr6 (17 HSPs)
chr6 (1-301)||(34168563-34168863)
chr6 (111-272)||(34119309-34119468)
chr6 (111-272)||(34146468-34146627)
chr6 (111-272)||(34159084-34159243)
chr6 (1-82)||(17249470-17249551)
chr6 (1-79)||(3137412-3137490)
chr6 (1-82)||(7749342-7749423)
chr6 (25-86)||(947958-948019)
chr6 (97-186)||(34149064-34149151)
chr6 (97-186)||(34161680-34161767)
chr6 (9-82)||(33220884-33220957)
chr6 (97-186)||(34114873-34114960)
chr6 (1-94)||(29338244-29338337)
chr6 (33-94)||(45818-45879)
chr6 (9-78)||(28009160-28009229)
chr6 (5-82)||(28543258-28543335)
chr6 (1-70)||(34304369-34304438)
[»] chr1 (25 HSPs)
chr1 (1-86)||(30688414-30688499)
chr1 (6-92)||(868571-868657)
chr1 (3-82)||(7213104-7213183)
chr1 (1-82)||(5453956-5454037)
chr1 (3-96)||(19035326-19035419)
chr1 (1-92)||(1114033-1114124)
chr1 (5-92)||(21472854-21472941)
chr1 (3-82)||(22346756-22346835)
chr1 (3-99)||(28493498-28493594)
chr1 (3-82)||(24177678-24177757)
chr1 (13-96)||(25376008-25376091)
chr1 (1-92)||(31737487-31737578)
chr1 (5-96)||(50161593-50161684)
chr1 (1-82)||(48841247-48841328)
chr1 (5-97)||(28041296-28041388)
chr1 (7-77)||(20259968-20260038)
chr1 (1-94)||(38842498-38842594)
chr1 (1-71)||(15761861-15761930)
chr1 (5-63)||(21934257-21934315)
chr1 (62-100)||(38731468-38731506)
chr1 (21-82)||(6790848-6790909)
chr1 (56-97)||(29170404-29170445)
chr1 (5-89)||(2898556-2898640)
chr1 (3-99)||(4611033-4611129)
chr1 (1-73)||(34644436-34644508)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-96)||(102953-103048)
[»] chr2 (18 HSPs)
chr2 (2-99)||(30602333-30602430)
chr2 (1-99)||(3208409-3208508)
chr2 (6-97)||(41702118-41702209)
chr2 (1-96)||(17344485-17344580)
chr2 (5-92)||(4413235-4413322)
chr2 (8-99)||(9685587-9685678)
chr2 (1-92)||(41868073-41868163)
chr2 (6-94)||(18745124-18745212)
chr2 (10-96)||(20143119-20143205)
chr2 (3-96)||(15515314-15515407)
chr2 (25-96)||(10587144-10587215)
chr2 (9-92)||(13413202-13413285)
chr2 (1-92)||(42122668-42122759)
chr2 (27-93)||(2626038-2626104)
chr2 (9-82)||(27494172-27494245)
chr2 (46-100)||(13845390-13845444)
chr2 (8-82)||(28224861-28224935)
chr2 (35-93)||(4849675-4849733)
[»] chr3 (21 HSPs)
chr3 (3-98)||(32546640-32546735)
chr3 (1-82)||(26772619-26772700)
chr3 (9-97)||(46940946-46941034)
chr3 (1-96)||(53785556-53785651)
chr3 (1-83)||(39583394-39583476)
chr3 (6-82)||(44694-44770)
chr3 (1-93)||(4763957-4764049)
chr3 (3-95)||(52741679-52741771)
chr3 (7-97)||(8591987-8592077)
chr3 (4-66)||(26856930-26856992)
chr3 (2-82)||(38671046-38671126)
chr3 (9-101)||(44198609-44198701)
chr3 (9-96)||(21552511-21552598)
chr3 (8-83)||(3643013-3643088)
chr3 (9-84)||(7502183-7502258)
chr3 (6-77)||(37133169-37133240)
chr3 (53-99)||(4472906-4472952)
chr3 (1-63)||(4669828-4669890)
chr3 (1-70)||(13582383-13582452)
chr3 (15-99)||(1804188-1804272)
chr3 (13-93)||(38978976-38979056)
[»] chr8 (16 HSPs)
chr8 (1-98)||(38815139-38815236)
chr8 (3-96)||(22589503-22589596)
chr8 (1-92)||(18804464-18804555)
chr8 (3-96)||(18596766-18596859)
chr8 (1-86)||(24320194-24320279)
chr8 (1-80)||(24350887-24350966)
chr8 (22-94)||(12751032-12751104)
chr8 (1-82)||(39434530-39434609)
chr8 (25-93)||(43823840-43823907)
chr8 (10-82)||(44337201-44337272)
chr8 (1-92)||(500093-500184)
chr8 (32-94)||(3825485-3825547)
chr8 (1-79)||(4699735-4699813)
chr8 (53-95)||(31150327-31150369)
chr8 (57-86)||(5329823-5329852)
chr8 (3-63)||(37514101-37514161)
[»] chr7 (23 HSPs)
chr7 (1-98)||(45614007-45614104)
chr7 (3-96)||(21327005-21327098)
chr7 (9-82)||(38766185-38766258)
chr7 (32-94)||(2520917-2520979)
chr7 (1-82)||(45003062-45003143)
chr7 (9-92)||(19277142-19277225)
chr7 (8-67)||(32584476-32584535)
chr7 (3-96)||(982796-982889)
chr7 (8-93)||(25187103-25187188)
chr7 (3-96)||(27027797-27027890)
chr7 (1-82)||(28517452-28517533)
chr7 (21-82)||(38832163-38832224)
chr7 (1-77)||(5825139-5825215)
chr7 (21-93)||(22197837-22197909)
chr7 (21-93)||(22239912-22239984)
chr7 (5-77)||(40726649-40726721)
chr7 (34-81)||(12137250-12137297)
chr7 (21-92)||(45974784-45974855)
chr7 (21-95)||(10904966-10905040)
chr7 (1-82)||(5972381-5972462)
chr7 (9-94)||(9281309-9281394)
chr7 (9-94)||(9292280-9292365)
chr7 (22-95)||(32681989-32682062)
[»] chr4 (24 HSPs)
chr4 (5-97)||(23604936-23605028)
chr4 (5-92)||(40392723-40392810)
chr4 (5-95)||(30940901-30940991)
chr4 (1-82)||(3329857-3329938)
chr4 (1-77)||(39001263-39001339)
chr4 (1-82)||(50001091-50001172)
chr4 (1-96)||(45661538-45661633)
chr4 (1-95)||(26521337-26521431)
chr4 (4-82)||(31846964-31847042)
chr4 (1-82)||(53619447-53619528)
chr4 (1-77)||(12053333-12053409)
chr4 (1-68)||(50464461-50464528)
chr4 (1-74)||(4419133-4419205)
chr4 (1-96)||(600857-600952)
chr4 (5-80)||(50442648-50442723)
chr4 (1-94)||(9601061-9601151)
chr4 (1-63)||(50463108-50463170)
chr4 (14-101)||(15785278-15785365)
chr4 (24-95)||(42455795-42455866)
chr4 (1-71)||(23255585-23255655)
chr4 (20-82)||(41372252-41372314)
chr4 (3-96)||(53170360-53170452)
chr4 (1-74)||(55933625-55933698)
chr4 (146-182)||(38649282-38649318)
[»] chr5 (18 HSPs)
chr5 (1-96)||(42921545-42921640)
chr5 (1-93)||(2566260-2566352)
chr5 (5-94)||(37873807-37873897)
chr5 (1-64)||(11005757-11005820)
chr5 (1-82)||(13167075-13167156)
chr5 (1-76)||(2917525-2917601)
chr5 (1-94)||(32269962-32270054)
chr5 (9-94)||(33466955-33467040)
chr5 (1-82)||(35310309-35310390)
chr5 (10-82)||(33692226-33692298)
chr5 (5-94)||(15292194-15292283)
chr5 (1-64)||(15506780-15506843)
chr5 (1-74)||(430471-430544)
chr5 (32-82)||(27913491-27913541)
chr5 (53-95)||(35993310-35993352)
chr5 (5-94)||(26212752-26212841)
chr5 (1-77)||(23023461-23023537)
chr5 (2-94)||(35455823-35455915)
[»] scaffold0406 (1 HSPs)
scaffold0406 (1-77)||(6754-6830)
[»] scaffold0309 (1 HSPs)
scaffold0309 (3-92)||(5175-5264)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-96)||(33097-33192)
[»] scaffold1768 (1 HSPs)
scaffold1768 (1-82)||(349-430)
[»] scaffold0186 (1 HSPs)
scaffold0186 (34-95)||(10225-10286)


Alignment Details
Target: chr6 (Bit Score: 297; Significance: 1e-167; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 34168863 - 34168563
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34168863 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaat 34168764  T
Q  101 agcttgattatatgaaaataggagtaagagattataaaaattgtgaaccctaaacaagaagcattgaataagaaaattaaaaaccttaacctcccaaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34168763 agcttgattatatgaaaataggagtaagagattataaaaattgtgaaccctaaacaagaagcattgaataagaaaattaaaaaccttaacctcccaaatc 34168664  T
Q  201 cgagaagatatgattattgtctagcaatcaatcgcaaaacagattgaaaggcaagaagacacataataataaaggctagccttgttctttgaaggcaatt 300  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34168663 cgagaagatatgattattttctagcaatcaatcgcaaaacagattgaaaggcaagaagacacataataataaaggctagccttgttctttgaaggcaatt 34168564  T
Q  301 g 301  Q
    |    
T  34168563 g 34168563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 111 - 272
Target Start/End: Complemental strand, 34119468 - 34119309
Alignment:
Q  111 tatgaaaataggagtaagagattataaaaattgtgaaccctaaacaagaagcattgaataagaaaattaaaaaccttaacctcccaaatccgagaagata 210  Q
    ||||||||| |||| |||||||  | ||||| ||||||| |||||| |||| |||||||||||||||||||||||  ||||||||||||||||||||||     
T  34119468 tatgaaaatcggagaaagagatactgaaaatggtgaaccgtaaacatgaagtattgaataagaaaattaaaaacc-aaacctcccaaatccgagaagatt 34119370  T
Q  211 tgattattgtctagcaatcaatcgcaaaacagattgaaaggcaagaagacacataataataa 272  Q
    ||| |||| || ||||||||||| || |||||||||||||| || | || |||| |||||||    
T  34119369 tgaatatt-tcgagcaatcaatcacataacagattgaaaggaaacatgagacatgataataa 34119309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 111 - 272
Target Start/End: Complemental strand, 34146627 - 34146468
Alignment:
Q  111 tatgaaaataggagtaagagattataaaaattgtgaaccctaaacaagaagcattgaataagaaaattaaaaaccttaacctcccaaatccgagaagata 210  Q
    ||||||||| |||| ||||||| || ||||| ||||||| |||||| |||| |||||||||||||||||||||||  |||||||| |||||||||||||     
T  34146627 tatgaaaatcggagaaagagataatgaaaatggtgaaccgtaaacatgaagtattgaataagaaaattaaaaacc-aaacctcccgaatccgagaagatt 34146529  T
Q  211 tgattattgtctagcaatcaatcgcaaaacagattgaaaggcaagaagacacataataataa 272  Q
    ||| || | || ||||||||||| || |||||||||||||| || | || |||| |||||||    
T  34146528 tgaatact-tcgagcaatcaatcacataacagattgaaaggaaacatgagacatgataataa 34146468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 111 - 272
Target Start/End: Complemental strand, 34159243 - 34159084
Alignment:
Q  111 tatgaaaataggagtaagagattataaaaattgtgaaccctaaacaagaagcattgaataagaaaattaaaaaccttaacctcccaaatccgagaagata 210  Q
    ||||||||| |||| ||||||| || ||||| ||||||| |||||| |||| |||||||||||||||||||||||  |||||||| |||||||||||||     
T  34159243 tatgaaaatcggagaaagagataatgaaaatggtgaaccgtaaacatgaagtattgaataagaaaattaaaaacc-aaacctcccgaatccgagaagatt 34159145  T
Q  211 tgattattgtctagcaatcaatcgcaaaacagattgaaaggcaagaagacacataataataa 272  Q
    ||| || | || ||||||||||| || |||||||||||||| || | || |||| |||||||    
T  34159144 tgaatact-tcgagcaatcaatcacataacagattgaaaggaaacatgagacatgataataa 34159084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17249470 - 17249551
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||| |||||||||| ||| ||||    
T  17249470 ttacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtataagtaat 17249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3137412 - 3137490
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaatt 79  Q
    ||||||||||||||||||| |||||||||||| |||| | ||||||||| ||||| |||||||| ||||||||||||||    
T  3137412 ttacgaggattggttttgccatccaaaaaggcttagcagtgcaacttgttgcccgtttgccttccattcatgtgtaatt 3137490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7749423 - 7749342
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||||||||||| |||| |||||| ||||||| ||| ||||| |||||||||||| |||||||||||||| ||||    
T  7749423 ttacgaggattggttttgccatcctaaaaggtctagcggtgcagcttgttgcccgcttgcctcctattcatgtgtaactaat 7749342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 948019 - 947958
Alignment:
Q  25 aaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatt 86  Q
    ||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||    
T  948019 aaaaaggcctagcggcgcagcttgtagaccgcttgccttatattcatgtgtaattaatcatt 947958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 34149151 - 34149064
Alignment:
Q  97 aaatagcttgattatatgaaaataggagtaagagattataaaaattgtgaaccctaaacaagaagcattgaataagaaaattaaaaacct 186  Q
    |||||||||||||||  ||||||||||| |||||||| | |||||  ||||||||| |||| | || |||||||||||||||||||||||    
T  34149151 aaatagcttgattat--gaaaataggagaaagagattttgaaaatcatgaaccctagacaaaatgccttgaataagaaaattaaaaacct 34149064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 34161767 - 34161680
Alignment:
Q  97 aaatagcttgattatatgaaaataggagtaagagattataaaaattgtgaaccctaaacaagaagcattgaataagaaaattaaaaacct 186  Q
    |||||||||||||||  ||||||||||| |||||||| | |||||  ||||||||| |||| | || |||||||||||||||||||||||    
T  34161767 aaatagcttgattat--gaaaataggagaaagagattttgaaaatcatgaaccctagacaaaatgccttgaataagaaaattaaaaacct 34161680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 33220884 - 33220957
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||| |||| |||||| ||||||||||| ||||| | |||||||||| |||||||||||||| ||||    
T  33220884 attggttttgccatcctaaaaggtctagcggcgcagcttgttggccgcttgcctcctattcatgtgtaagtaat 33220957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 34114960 - 34114873
Alignment:
Q  97 aaatagcttgattatatgaaaataggagtaagagattataaaaattgtgaaccctaaacaagaagcattgaataagaaaattaaaaacct 186  Q
    |||||||||||||||  |||||| |||| |||||||||| |||||  |||| |||  |||| |||| |||||||||||||||||||||||    
T  34114960 aaatagcttgattat--gaaaattggagaaagagattatgaaaatgatgaatcctggacaaaaagccttgaataagaaaattaaaaacct 34114873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 29338244 - 29338337
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||| ||||||| |||| |||||||||| |||||||| | ||| ||||| |||| |||| ||| |||||||| | ||||||||||| |||||||    
T  29338244 ttacaaggattgatttttctatccaaaatggcctagcagtgcagcttgttgcccacttgtcttttattcatgcgcaattaatcattgatatata 29338337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 45818 - 45879
Alignment:
Q  33 ctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    ||||||||||| ||||| |||||||||||| ||||||| |||||| ||||  ||||||||||    
T  45818 ctagcggcgcagcttgttgcccgcttgcctcctattcaagtgtaaataatggtttatatata 45879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 28009160 - 28009229
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaat 78  Q
    |||| |||||| ||||||||||||||| || |||| ||| | | ||| ||||||||||||||||||||||    
T  28009160 attgattttgcaatccaaaaaggcctaacgacgcagcttattgtccgtttgccttctattcatgtgtaat 28009229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 28543335 - 28543258
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||||||| |||  |||||  ||||||||||||||  | | |||||||||||||||||||| |||| ||||    
T  28543335 gaggattggttttgccatctgaaaagatctagcggcgcaactaattgtccgcttgccttctattcatgcgtaagtaat 28543258  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34304438 - 34304369
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattca 70  Q
    |||||||||||| |||||| |||||||||||  ||||||| ||| |||| |||||  ||||| |||||||    
T  34304438 ttacgaggattgattttgcaatccaaaaaggtatagcggcacaaattgttgcccgtctgcctcctattca 34304369  T

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Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30688499 - 30688414
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatt 86  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  30688499 ttacgaggattggttttgttatccaaaaaggcctagcggcgcagcttgttgcccgcttgccatctattcatgtgtaattaatcatt 30688414  T

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Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 868571 - 868657
Alignment:
Q  6 aggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||| ||||  ||||||||    
T  868571 aggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaaataattgtttatata 868657  T

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Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 7213183 - 7213104
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||| |||||||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  7213183 acgatgattggttttaccatccaaaaaggtctagcggcgcaacttgttgcccgcttgccttctattcaagtgtaaataat 7213104  T

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Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5454037 - 5453956
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||| |||||||||||||  ||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||| ||||    
T  5454037 ttacaaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 5453956  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 19035419 - 19035326
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||||||||  ||||||||||| ||||||||||| ||||| | ||| |||||||||||||| |||||| ||||  ||||||||||||    
T  19035419 acgaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgtccgattgccttctattcaagtgtaaataatggtttatatatata 19035326  T

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Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1114033 - 1114124
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||||||||||||| ||||||||||| ||| |||| || ||||| ||||||||| |||||||||| |||||| ||||  ||||||||    
T  1114033 ttacgaggattggttttgccatccaaaaaggtctaacggcacagcttgttgcccgcttggcttctattcaagtgtaaataatggtttatata 1114124  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 21472941 - 21472854
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| | |||||||||| ||||||||| |||||| ||||  ||||||||    
T  21472941 gaggactggttttgccatccaaaaaggtctagcggcgcaacttattgcccgcttgcattctattcaagtgtaaataatggtttatata 21472854  T

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Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 22346835 - 22346756
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||| ||||||| ||||||||||| ||||||||||| ||||| | |||||||||||||||||| |||||| ||||    
T  22346835 acgaggattagttttgccatccaaaaaggtctagcggcgcagcttgttgtccgcttgccttctattcaagtgtaaataat 22346756  T

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Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 28493498 - 28493594
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaa 99  Q
    |||||||||| |||||| ||||||||||| |||||||||||  |||| | ||| ||| |||||||||| |||||| |||| ||||||||| ||||||    
T  28493498 acgaggattgattttgccatccaaaaaggtctagcggcgcagtttgttgtccgtttgtcttctattcaagtgtaaataatgatttatataaataaaa 28493594  T

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Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 24177678 - 24177757
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||||||||| | ||||||||| ||||||| ||| ||||| ||||||||| |||||||||| |||||| ||||    
T  24177678 acgaggattggttttgccaaccaaaaaggtctagcggtgcagcttgttgcccgcttgtcttctattcaagtgtaaataat 24177757  T

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Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 25376008 - 25376091
Alignment:
Q  13 gttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||| ||||||||||||||||| || || ||||||| |   | ||||||||||||||||||||||||||||||||| ||||||    
T  25376008 gttttactatccaaaaaggcctaacgacgtaacttgttgtttgtttgccttctattcatgtgtaattaatcatttatttatata 25376091  T

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Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31737487 - 31737578
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    |||||||||||| |||||| |||||||||||| | |||||||| ||||| | | | |||||||||||||| |||||| ||||  ||||||||    
T  31737487 ttacgaggattgattttgccatccaaaaaggcttggcggcgcagcttgttgtctgtttgccttctattcaagtgtaaataattgtttatata 31737578  T

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Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 50161593 - 50161684
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||  ||||||||| |||| ||| ||||||| || ||||| ||||  |||||||||||| || |||||||||||||| |||||||||    
T  50161593 gaggattgaatttgctatctaaaacggcttagcggcacagcttgttgcccttttgccttctatttatttgtaattaatcattgatatatata 50161684  T

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Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48841247 - 48841328
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||||||| |||||| ||||||||| | ||||| ||||||||||| | |||||| |||  ||||||||||||| ||||    
T  48841247 ttacgaggattgattttgcaatccaaaaaagtctagcagcgcaacttgttgtccgcttacctcatattcatgtgtaagtaat 48841328  T

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Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 28041296 - 28041388
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataa 97  Q
    |||||||| |||| | ||||||||||| ||||||||| | ||||| | ||||||| |||||||| | |||||| ||||  |||||||||||||    
T  28041296 gaggattgatttttccatccaaaaaggtctagcggcggagcttgttgtccgcttgtcttctatttaagtgtaaataatggtttatatatataa 28041388  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 20259968 - 20260038
Alignment:
Q  7 ggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaa 77  Q
    ||||||||||||| ||||||||||| |||||||||||  |||| ||||  ||| |||||||||| ||||||    
T  20259968 ggattggttttgccatccaaaaaggtctagcggcgcagtttgttgccccattgtcttctattcaagtgtaa 20260038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38842594 - 38842498
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaac---ttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||| |||||||| | ||||||||||| || || |     |||| |||| ||||| ||||||||||||||||||||||||| |||||||    
T  38842594 ttacgaggattgattttgctacctaaaaaggcctaacgacgtagtagtttgttgcccacttgctttctattcatgtgtaattaatcattgatatata 38842498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15761930 - 15761861
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcat 71  Q
    |||||||||||| |||||| || |||||| || || ||||||||||| | ||||||||| |||||||||||    
T  15761930 ttacgaggattgattttgccatacaaaaaagc-taacggcgcaacttattgcccgcttgacttctattcat 15761861  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21934315 - 21934257
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgcctt 63  Q
    ||||||||||||||| |||||||||||  |||||||||| ||||| ||| |||| ||||    
T  21934315 gaggattggttttgccatccaaaaagggttagcggcgcagcttgttgcctgcttacctt 21934257  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 38731506 - 38731468
Alignment:
Q  62 ttctattcatgtgtaattaatcatttatatatataaaat 100  Q
    |||||||||||||||||||||| || |||||||||||||    
T  38731506 ttctattcatgtgtaattaatccttaatatatataaaat 38731468  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 6790848 - 6790909
Alignment:
Q  21 atccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||||| ||||||||| ||  ||||  ||||| |||||||||||||||||||| ||||    
T  6790848 atccaaaaagacctagcggcacagtttgttacccgcctgccttctattcatgtgtaagtaat 6790909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 29170404 - 29170445
Alignment:
Q  56 cttgccttctattcatgtgtaattaatcatttatatatataa 97  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
T  29170404 cttgccttctattcaagtgtaaataataatttatatatataa 29170445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 2898640 - 2898556
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttat 89  Q
    |||||||| |||||| |||||||||||| |||||||| | |||||   || |||| ||||||||||  ||||| |||| ||||||    
T  2898640 gaggattgattttgccatccaaaaaggcttagcggcgtagcttgttatccacttgtcttctattcaaatgtaaataatgatttat 2898556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 4611129 - 4611033
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaa 99  Q
    |||| ||||| |||||  ||||||||||| ||| | || || ||||| | ||||||||||| |||||| || ||| |||| | ||||||||||||||    
T  4611129 acgatgattgattttgtcatccaaaaaggtctaacagcacagcttgttgtccgcttgccttttattcaagtataaataatgacttatatatataaaa 4611033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34644508 - 34644436
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgt 73  Q
    |||||| ||||| |||||| ||||||||| | |||||||||||  |||| |||||||| ||| ||||| ||||    
T  34644508 ttacgatgattgattttgccatccaaaaaagtctagcggcgcagtttgttgcccgcttacctcctatttatgt 34644436  T

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Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 103048 - 102953
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| ||||  ||||||||||||    
T  103048 ttacgaggattggttttgccatccaaaaaggtctagcggcgcaacttgttgcccgcttgccttctattcaagtgtaaataatggtttatatatata 102953  T

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Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 30602430 - 30602333
Alignment:
Q  2 tacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaa 99  Q
    |||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||| |||||||||||||||||||||||||| || ||||||| ||||    
T  30602430 tacgaggattggttttgccatccaaaaaggcctagcagcgcagcttgttgcccgcatgccttctattcatgtgtaattaatccttgatatataaaaaa 30602333  T

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Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3208409 - 3208508
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttat-atatataaaa 99  Q
    ||||||||||||||||||| |||||||||||  |||||||||| ||||| |||||||||||||||||||| |||||| ||||  ||||| ||||||||||    
T  3208409 ttacgaggattggttttgccatccaaaaaggtttagcggcgcagcttgttgcccgcttgccttctattcaagtgtaaataatggtttataatatataaaa 3208508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 41702209 - 41702118
Alignment:
Q  6 aggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataa 97  Q
    |||||||||||||| |||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||| ||||| || ||||| ||||    
T  41702209 aggattggttttgccatccaaaaaggcctagtggcgcagcttgttgcccacttgccttctattcatgtgtaagtaatccttgatataaataa 41702118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17344580 - 17344485
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    |||||||||||| |||| | ||||||||||| ||| ||||||| ||||| ||| |||||||||||||||| |||||| |||| |||||||||||||    
T  17344580 ttacgaggattgatttttcgatccaaaaaggtctatcggcgcagcttgttgccggcttgccttctattcaagtgtaaataatgatttatatatata 17344485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 4413235 - 4413322
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    |||||||| |||||| ||||||||||| ||||||||||| ||||| |||| ||||||||||||||| |||||| ||||  ||||||||    
T  4413235 gaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgcccacttgccttctattcaagtgtaaataattgtttatata 4413322  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 9685587 - 9685678
Alignment:
Q  8 gattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaa 99  Q
    ||||| |||||| ||||||||||| ||||||||||| ||||| ||||||||||||| ||||||  |||||  ||| ||||||||||||||||    
T  9685587 gattgtttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgccttatattcaaatgtaaacaataatttatatatataaaa 9685678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41868073 - 41868163
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||||||||||||| | ||||||||  ||||||||||||||||| |||||||||| ||||||||| |||||| ||||  ||||||||    
T  41868073 ttacgaggattggttttgcca-ccaaaaagatctagcggcgcaacttgttgcccgcttgctttctattcaagtgtaaataatggtttatata 41868163  T

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Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 18745124 - 18745212
Alignment:
Q  6 aggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||||| ||||||||||| ||||||||||| ||| | || |||||| |||||||||| |||||| ||||  ||||||||||    
T  18745124 aggattggttttgccatccaaaaaggtctagcggcgcagcttattgctcgcttgtcttctattcaagtgtaaataatggtttatatata 18745212  T

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Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 20143119 - 20143205
Alignment:
Q  10 ttggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    |||||||||| ||||||||||| ||||||||||||||||| | | | ||||||||||||||  ||||| ||||  ||||||||||||    
T  20143119 ttggttttgccatccaaaaaggtctagcggcgcaacttgttgtctgtttgccttctattcaaatgtaaataatggtttatatatata 20143205  T

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Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 15515314 - 15515407
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||||||||| ||||||||| | |||||||||||  |||| ||| | |||||||||| ||| |||||| ||||  ||||||||||||    
T  15515314 acgaggattggttttgccatccaaaaaagtctagcggcgcagtttgttgcctgtttgccttctactcaagtgtaaataatggtttatatatata 15515407  T

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Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 10587144 - 10587215
Alignment:
Q  25 aaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||| ||||| || |||||||||    
T  10587144 aaaaaggtctagcggcgtagcttgttgcccgtttgccttctattcatgtgtaagtaatccttgatatatata 10587215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 13413285 - 13413202
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||||| ||||||||||||||| |||| || ||||| | ||||||| |||||||||| |||||| ||||  ||||||||    
T  13413285 attggttttgccatccaaaaaggcctaacggctcagcttgttgtccgcttgtcttctattcaagtgtaaataatggtttatata 13413202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42122759 - 42122668
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||| ||||||||| ||||||||| | ||||||||||| ||| | |  ||||||||||||||||| |||||| ||||  ||||||||    
T  42122759 ttacgaggactggttttgccatccaaaaaagtctagcggcgcagcttattgttcgcttgccttctattcaagtgtaaataatggtttatata 42122668  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 2626038 - 2626104
Alignment:
Q  27 aaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    ||||| ||| ||||||| ||||| | |||||||||||||||||||||||||||||| ||| ||||||    
T  2626038 aaaggtctaacggcgcagcttgttgtccgcttgccttctattcatgtgtaattaattattgatatat 2626104  T

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Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 27494245 - 27494172
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| ||| |||||||| |||||||| ||||| ||||    
T  27494245 attggttttgccatccaaaaaggtctaacggcgcagcttgttgcctgcttgcctcctattcatatgtaagtaat 27494172  T

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Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 13845390 - 13845444
Alignment:
Q  46 ttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaat 100  Q
    |||| |||||||||| |||||||||||||||| ||||  ||||||||||||||||    
T  13845390 ttgttgcccgcttgctttctattcatgtgtaaataattttttatatatataaaat 13845444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 28224935 - 28224861
Alignment:
Q  8 gattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||| ||||||| ||||||||||| ||||||||||| ||| | ||||||||| || |||||||| ||||| ||||    
T  28224935 gatttgttttgccatccaaaaaggtctagcggcgcagcttattgcccgcttgtctcctattcatttgtaagtaat 28224861  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 4849733 - 4849675
Alignment:
Q  35 agcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    ||||| ||||||||| |||| ||| ||||||||||| |||||| |||| ||||||||||    
T  4849733 agcggtgcaacttgttgcccacttaccttctattcaagtgtaaataatgatttatatat 4849675  T

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Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 32546735 - 32546640
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaa 98  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||| ||||  ||||||||||||||    
T  32546735 acgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaaataatggtttatatatataaa 32546640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26772700 - 26772619
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||||||| |||||| ||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||| ||||    
T  26772700 ttacgaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 26772619  T

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Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 46940946 - 46941034
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataa 97  Q
    |||| ||||| ||||||||||| |||||||| ||||||||| ||| | || ||||||||||||||||||||||||||| ||||||||||    
T  46940946 attgattttgttatccaaaaagacctagcggtgcaacttgttgcctgtttaccttctattcatgtgtaattaatcattaatatatataa 46941034  T

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Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 53785651 - 53785556
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||||||||||| |||||| |||| | ||||||| | ||||| |||||||||||||||||||| |||||| ||||  ||||||||||||    
T  53785651 ttacgaggattggttttgccatccaacaaggtccagcggcgtagcttgttgcccgcttgccttctattcaagtgtaaataatggtttatatatata 53785556  T

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Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39583394 - 39583476
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatc 83  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||||||| | | |||||| |||||||||||||||| |||||    
T  39583394 ttacgaggattgattttgccatccaaaaaggtctagcggcgcaacttgttgtctgcttgctttctattcatgtgtaagtaatc 39583476  T

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Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 44770 - 44694
Alignment:
Q  6 aggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||| ||||||| ||||||||||| |||||||||||  |||| |||||||||||||||||||| |||||| ||||    
T  44770 aggatttgttttgccatccaaaaaggtctagcggcgcagtttgttgcccgcttgccttctattcaagtgtaaataat 44694  T

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Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4763957 - 4764049
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    ||||||||||| |  |||| |||||||||||| | | |||||||||||| |||||||||||||||||||| |||||| ||||  |||||||||    
T  4763957 ttacgaggattagaattgccatccaaaaaggcttggtggcgcaacttgttgcccgcttgccttctattcaagtgtaaataatggtttatatat 4764049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 52741679 - 52741771
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    |||| |||| ||||||| ||||||||||| |||||| |||||||| | ||||||| |||||||||||| |||||| ||||  |||||||||||    
T  52741679 acgaagatttgttttgccatccaaaaaggtctagcgacgcaacttattgcccgctcgccttctattcaagtgtaaataatggtttatatatat 52741771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 8592077 - 8591987
Alignment:
Q  7 ggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataa 97  Q
    |||||| |||||| ||||||||||||| ||||||||| |||||  ||| |||||||| ||||||||||||| ||||  || ||||||||||    
T  8592077 ggattgattttgccatccaaaaaggcccagcggcgcagcttgttacccacttgccttatattcatgtgtaagtaattcttgatatatataa 8591987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 26856930 - 26856992
Alignment:
Q  4 cgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttcta 66  Q
    |||||||||||||| | ||||||||||||||||||||||| ||||| || |||||||||||||    
T  26856930 cgaggattggttttaccatccaaaaaggcctagcggcgcagcttgttgctcgcttgccttcta 26856992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 38671046 - 38671126
Alignment:
Q  2 tacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||||||||||||| ||| ||||| | ||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||    
T  38671046 tacgaggattggttttgccatctaaaaaagtctagcggcgcagcttgttgtccgcttacctcctatttatgtgtaaataat 38671126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 44198701 - 44198609
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaata 101  Q
    |||| |||||| |||||||||||   |||| | || ||||| | |||||||||||||||||| |||||| |||| ||||||||||| ||||||    
T  44198701 attgattttgccatccaaaaaggttgagcgacacagcttgttgtccgcttgccttctattcaagtgtaaataataatttatatatacaaaata 44198609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 21552598 - 21552511
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||  |||||||||| | |  ||||||||||||| ||||| || ||||||||||| |||||| |||| || ||||||||||    
T  21552598 attggttttgacatccaaaaagacttgacggcgcaacttgttgcccgtttaccttctattcaagtgtaaataatgatatatatatata 21552511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 3643088 - 3643013
Alignment:
Q  8 gattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatc 83  Q
    ||||| |||||  |||| |||||||||| || |||| ||| | ||||||||||||||||||  |||||||||||||    
T  3643088 gattgattttgtcatccgaaaaggcctaacgacgcagcttattgcccgcttgccttctattattgtgtaattaatc 3643013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 7502183 - 7502258
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatca 84  Q
    |||| ||||||||||||||||| ||||| | | || ||||| ||  |||||  |||||||||||||||||||||||    
T  7502183 attgattttgctatccaaaaagacctagtgactcagcttgttgcttgcttgtattctattcatgtgtaattaatca 7502258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 37133169 - 37133240
Alignment:
Q  6 aggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaa 77  Q
    |||||||||||||| ||||||||||| |||||||||||  |||| | ||  ||| |||||||||| ||||||    
T  37133169 aggattggttttgcgatccaaaaaggtctagcggcgcagtttgttgtcccattgtcttctattcaggtgtaa 37133240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 4472952 - 4472906
Alignment:
Q  53 ccgcttgccttctattcatgtgtaattaatcatttatatatataaaa 99  Q
    ||||||| ||||||||||||||||| |||||| | ||||||||||||    
T  4472952 ccgcttgtcttctattcatgtgtaagtaatcaatgatatatataaaa 4472906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4669828 - 4669890
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgcctt 63  Q
    |||||| ||||| ||||| ||||||||||||  | |||||||| ||||| |||||||||||||    
T  4669828 ttacgatgattgattttgttatccaaaaaggtttggcggcgcagcttgttgcccgcttgcctt 4669890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13582452 - 13582383
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattca 70  Q
    |||||| ||||| ||| || |||||||||||||||||| |||   || | ||||||||||||||||||||    
T  13582452 ttacgaagattgatttagccatccaaaaaggcctagcgacgctgtttattgcccgcttgccttctattca 13582383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 1804188 - 1804272
Alignment:
Q  15 tttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaa 99  Q
    |||| ||||| ||||  |||| |||| ||| |||| ||||||| | ||||||||||||||||| |||||||| | | ||||||||    
T  1804188 tttgttatcccaaaaaacctaacggcacaatttgttgcccgctcgtcttctattcatgtgtaaataatcattgacaaatataaaa 1804272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 38978976 - 38979056
Alignment:
Q  13 gttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    ||||||| |||||||||||| || |  |||||||||| ||||| | | ||| |||||| |||||| |||| ||||||||||    
T  38978976 gttttgccatccaaaaaggcttaacaacgcaacttgttgcccgttagtcttatattcaagtgtaaataatgatttatatat 38979056  T

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Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 38815236 - 38815139
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaa 98  Q
    ||||||||||||||||| | |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||  |||| || |||||||||||    
T  38815236 ttacgaggattggtttttccatccaaaaaggcttagcggcgcagcttgttgcccgcttgccttctattcatgtgtaagcaatccttgatatatataaa 38815139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 22589503 - 22589596
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||| |||||| |||||| ||||  ||||||||||||    
T  22589503 acgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgccttttattcaagtgtaaataatggtttatatatata 22589596  T

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Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18804555 - 18804464
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||| |||||||||||||||| |||||| ||||  ||||||||    
T  18804555 ttacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcctgcttgccttctattcaagtgtaaataatggtttatata 18804464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 18596766 - 18596859
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||||||||| |||| |||||| ||||||||||| ||||| | | |||||||||||||||| |||||| ||||  ||||||||||||    
T  18596766 acgaggattggttttgccatccgaaaaggtctagcggcgcagcttgttgtcagcttgccttctattcaagtgtaaataatggtttatatatata 18596859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24320279 - 24320194
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatt 86  Q
    |||||||||||| ||||| |||||||||||| ||||| | ||| ||||| ||| | ||| ||||||||| ||||||||||||||||    
T  24320279 ttacgaggattgattttgatatccaaaaaggtctagcagtgcagcttgttgcctgtttgtcttctattcgtgtgtaattaatcatt 24320194  T

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Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24350887 - 24350966
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaatta 80  Q
    |||||||||||||||||||  |||||||| |||||| ||| || | ||| ||||||||  ||||||||||||||||||||    
T  24350887 ttacgaggattggttttgccctccaaaaaagcctagtggcccagcctgttgcccgcttatcttctattcatgtgtaatta 24350966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 12751032 - 12751104
Alignment:
Q  22 tccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||||||| ||||| ||||| | | | |||| ||||||| ||||||||||||||||| |||||||    
T  12751032 tccaaaaaggcctagcagcgcagcttgttgtcagtttgctttctatttatgtgtaattaatcattgatatata 12751104  T

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Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39434609 - 39434530
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||||||| |||||| ||||||||||| ||||||||||| ||||| ||  ||  |||| |||||||||||||| ||||    
T  39434609 ttacgaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgctagc--gcctcctattcatgtgtaagtaat 39434530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 43823907 - 43823840
Alignment:
Q  25 aaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    ||||||||||||  ||||||||| | |||| ||||||||||||| |||||||||||||| || ||||||    
T  43823907 aaaaaggcctagttgcgcaactttttgccctcttgccttctatt-atgtgtaattaatccttgatatat 43823840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 44337272 - 44337201
Alignment:
Q  10 ttggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||||| ||||||||||| | |||||| || ||||| || ||||||||| |||||||||||||| ||||    
T  44337272 ttggttttgccatccaaaaaggtccagcggc-cagcttgttgctcgcttgcctcctattcatgtgtaagtaat 44337201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 500184 - 500093
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    |||||||||||| |||| | || ||||||||| |  |||| || ||| | |||||||||||||||||||| |||||| ||||  ||||||||    
T  500184 ttacgaggattgattttaccattcaaaaaggcttgacggcacagcttattgcccgcttgccttctattcaagtgtaaataatggtttatata 500093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 3825547 - 3825485
Alignment:
Q  32 cctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||||||||| || || ||| ||| |||| |||||||||||||| || |||||||    
T  3825547 cctagcggcgcaacttgttgctcgtttgtcttttatttatgtgtaattaatccttgatatata 3825485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4699813 - 4699735
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaatt 79  Q
    |||| |||||| ||||||| |||||||||||| ||| |||||| ||||| |||| || ||| | || ||||||||||||    
T  4699813 ttacaaggattagttttgccatccaaaaaggcttagtggcgcagcttgttgccccctcgccatatactcatgtgtaatt 4699735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 31150327 - 31150369
Alignment:
Q  53 ccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    ||||||| ||||||||||||||||||||||| || ||||||||    
T  31150327 ccgcttgtcttctattcatgtgtaattaatccttgatatatat 31150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 86
Target Start/End: Original strand, 5329823 - 5329852
Alignment:
Q  57 ttgccttctattcatgtgtaattaatcatt 86  Q
    ||||||||||||||||||||||||||||||    
T  5329823 ttgccttctattcatgtgtaattaatcatt 5329852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 37514161 - 37514101
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgcctt 63  Q
    |||||||||| | |||| | ||||||||| ||| ||||||| ||||| |||||||||||||    
T  37514161 acgaggattgatcttgccacccaaaaaggtctaacggcgcagcttgttgcccgcttgcctt 37514101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 45614007 - 45614104
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaa 98  Q
    ||||||||||||||||||| |||| |||||| ||||||||||| ||||| | ||||||||||||||||||  ||||| ||||  ||||||||||||||    
T  45614007 ttacgaggattggttttgccatccgaaaaggtctagcggcgcagcttgttgtccgcttgccttctattcaactgtaaataatggtttatatatataaa 45614104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 21327005 - 21327098
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    |||||||||| |||||| ||||||||||| ||| ||||||| ||||| | | |||||||||||||||| |||||| ||||  ||||||||||||    
T  21327005 acgaggattgattttgccatccaaaaaggtctaacggcgcagcttgttgtctgcttgccttctattcaagtgtaaataatggtttatatatata 21327098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 38766258 - 38766185
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||| |||||||||||||| ||||    
T  38766258 attggttttgccatccaaaaaggtctagctgcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 38766185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 2520917 - 2520979
Alignment:
Q  32 cctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||||||| || |||||||    
T  2520917 cctagcggcgcagcttgttgtccgcttgccttctattcatgtgtaattaatctttgatatata 2520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45003062 - 45003143
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||| ||||| |||||| ||||||||||| ||||||||||| ||| | | |||||||||| |||||||||||||| ||||    
T  45003062 ttacgaagattgattttgccatccaaaaaggtctagcggcgcagcttattgtccgcttgcctcctattcatgtgtaagtaat 45003143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 19277225 - 19277142
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||||| ||||||||||| ||||||||||| ||| | |||||| |||||||||||||  ||||| ||||  ||||||||    
T  19277225 attggttttgccatccaaaaaggtctagcggcgcagcttattgcccgcctgccttctattcaaatgtaaataatggtttatata 19277142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 32584535 - 32584476
Alignment:
Q  8 gattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctat 67  Q
    ||||| |||| | ||||||||||||||||| |||||||||||||||||||||| ||||||    
T  32584535 gattgattttaccatccaaaaaggcctagcagcgcaacttgtcgcccgcttgctttctat 32584476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 982889 - 982796
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    |||||||||||| |||| ||||||||||| |||||| | || ||||| ||| | |||||||||||||| || ||| ||||  ||||||||||||    
T  982889 acgaggattggtattgccatccaaaaaggtctagcgacacagcttgttgcctgtttgccttctattcaagtttaaataatggtttatatatata 982796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 25187103 - 25187188
Alignment:
Q  8 gattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    ||||| |||| | ||| ||||||  ||||||||||| ||||| |||||||||||||||||||| |||||| ||||  |||||||||    
T  25187103 gattgattttaccatctaaaaagatctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaaataatggtttatatat 25187188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 27027797 - 27027890
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||||||||||||||||||||  ||||||| | | |||||  ||| |||||||||||||||   |||| ||||  ||||||||||||    
T  27027797 acgaggattggttttgctatccaaaaagatctagcggtgtagcttgttacccacttgccttctattcaaacgtaaataatagtttatatatata 27027890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28517452 - 28517533
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||||||||||| ||||||||| | |||||| | || ||||| |||||  ||||| |||||||||||||| ||||    
T  28517452 ttacgaggattggttttgccatccaaaaaagtctagcgacacagcttgttgcccgtctgcctcctattcatgtgtaagtaat 28517533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 38832224 - 38832163
Alignment:
Q  21 atccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||| ||||||||||| ||||| |||||||||||| |||||||| ||||| ||||    
T  38832224 atccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatatgtaagtaat 38832163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5825215 - 5825139
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaa 77  Q
    ||||||||||||||||||| ||| ||||||| ||  ||||||| |||||  || |||||||| ||||||||||||||    
T  5825215 ttacgaggattggttttgccatcgaaaaaggtcttacggcgcagcttgttacctgcttgcctcctattcatgtgtaa 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 22197909 - 22197837
Alignment:
Q  21 atccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    |||||||||||| | |||| ||||||||| ||||||||| |||||||||| | |||| ||||  |||||||||    
T  22197909 atccaaaaaggcttggcggtgcaacttgttgcccgcttgtcttctattcaagagtaaataatggtttatatat 22197837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 22239912 - 22239984
Alignment:
Q  21 atccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    |||||||||||| | |||| ||||||||| ||||||||| |||||||||| | |||| ||||  |||||||||    
T  22239912 atccaaaaaggcttggcggtgcaacttgttgcccgcttgtcttctattcaagagtaaataatggtttatatat 22239984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 40726649 - 40726721
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaa 77  Q
    |||||||| |||||| ||||||||| | ||| |  |||| ||||| |||||||||||| ||||||||||||||    
T  40726649 gaggattgattttgccatccaaaaatgtctaacatcgcagcttgttgcccgcttgcctcctattcatgtgtaa 40726721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 12137250 - 12137297
Alignment:
Q  34 tagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaa 81  Q
    |||||||||||||||| |||||||||||||   |||||||||||||||    
T  12137250 tagcggcgcaacttgttgcccgcttgcctttcgttcatgtgtaattaa 12137297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 45974784 - 45974855
Alignment:
Q  21 atccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||||| |||| |||||| ||||| | ||||||| |||||||||| |||||| ||||  ||||||||    
T  45974784 atccaaaaaggtctagtggcgcagcttgttgtccgcttgtcttctattcaagtgtaaataatggtttatata 45974855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 10905040 - 10904966
Alignment:
Q  21 atccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    |||||||||| |||||  ||||| |||||  ||| ||||| |||||||||||||||| |||| ||| ||||||||    
T  10905040 atccaaaaagacctagtagcgcagcttgttaccctcttgcattctattcatgtgtaaataattattgatatatat 10904966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5972381 - 5972462
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||| ||||||| |||||||||| |||| ||  ||||||| |  ||||  ||||||||||||| |||||| ||||    
T  5972381 ttacgaggattagttttgccatccaaaaagacctaacgatgcaacttatttcccgtatgccttctattcaagtgtaaataat 5972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 9281309 - 9281394
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    ||||||||||| |||||||||||| || ||| |||  |||| | | |||| |||| ||||||| ||||||||||| || |||||||    
T  9281309 attggttttgcaatccaaaaaggcttaacggtgcagtttgttgtctgcttaccttatattcatatgtaattaatctttgatatata 9281394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 9292280 - 9292365
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    ||||||||||| |||||||||||| || ||| |||  |||| | | |||| |||| ||||||| ||||||||||| || |||||||    
T  9292280 attggttttgcaatccaaaaaggcttaacggtgcagtttgttgtctgcttaccttatattcatatgtaattaatctttgatatata 9292365  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 32681989 - 32682062
Alignment:
Q  22 tccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    ||||||||||| | |||||||| ||| | | || ||||||||||||||| |||||| ||||  |||||||||||    
T  32681989 tccaaaaaggcttggcggcgcagcttattgtccacttgccttctattcaagtgtaaataatggtttatatatat 32682062  T

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Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 23605028 - 23604936
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataa 97  Q
    |||||||| |||||  ||||||||||| ||||||||||||||||| | ||| ||| ||||||||||||||||| |||||||| ||||||||||    
T  23605028 gaggattgattttgtcatccaaaaaggtctagcggcgcaacttgttgtccggttgtcttctattcatgtgtaaataatcattgatatatataa 23604936  T

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Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 40392723 - 40392810
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||| | |||||||||||||||||| |||||| ||||  ||||||||    
T  40392723 gaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgtccgcttgccttctattcaagtgtaaataatggtttatata 40392810  T

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Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 30940901 - 30940991
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    |||||||| |||||| ||||||||||| |||||| |||| ||||| |||||||||||||||||||| |||||| ||||  |||||||||||    
T  30940901 gaggattgattttgccatccaaaaaggtctagcgacgcagcttgttgcccgcttgccttctattcaagtgtaaataatggtttatatatat 30940991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3329938 - 3329857
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||| |||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||| ||||||| |||||| ||||    
T  3329938 ttacgatgattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcacgtgtaagtaat 3329857  T

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Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39001339 - 39001263
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaa 77  Q
    ||||||||||||||||||  ||||||||||| |||||||||||  |||| |||||||||||| ||||||||||||||    
T  39001339 ttacgaggattggttttgtcatccaaaaaggtctagcggcgcagtttgttgcccgcttgcctcctattcatgtgtaa 39001263  T

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Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 50001091 - 50001172
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||| ||||| |||||| ||||||||||  ||||||||||| ||||| |||||||||||| |||||||||||||| ||||    
T  50001091 ttacgaagattgattttgccatccaaaaagatctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 50001172  T

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Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45661633 - 45661538
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    ||||||||||||||||| |||||||||||| |||| |||  ||  |||| || ||||||||||||| |||| ||||||||||| || |||||||||    
T  45661633 ttacgaggattggttttactatccaaaaagacctaacggtacagtttgttgcacgcttgccttctactcatatgtaattaatcgttgatatatata 45661538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26521431 - 26521337
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    ||||||||||||||||||  |||||||||||  ||||||| || ||| | | ||||||||||||||| ||||||||| ||||| || ||||||||    
T  26521431 ttacgaggattggttttgtcatccaaaaaggtttagcggcacagctttttgtccgcttgccttctatccatgtgtaagtaatccttgatatatat 26521337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 31847042 - 31846964
Alignment:
Q  4 cgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||| ||| ||| ||||||||||| |||||||||||  |||| |||||||||||| |||||||||||||| ||||    
T  31847042 cgaggattcgttatgccatccaaaaaggtctagcggcgcaggttgttgcccgcttgcctcctattcatgtgtaagtaat 31846964  T

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Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 53619528 - 53619447
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||  ||| ||| |||||||||||||| ||||    
T  53619528 ttacgagaattggttttgccatccaaaaaggtctagcggcgcagcttgttgcctacttacctcctattcatgtgtaagtaat 53619447  T

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Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12053409 - 12053333
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaa 77  Q
    ||||||| ||||||||||| ||| ||||||||| |||| |||| ||||| | | |||||||||||||||||||||||    
T  12053409 ttacgagaattggttttgccatcgaaaaaggccgagcgacgcagcttgttgtctgcttgccttctattcatgtgtaa 12053333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50464461 - 50464528
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctatt 68  Q
    |||||||||||  |||||| |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  50464461 ttacgaggatttattttgccatccaaaaagacctagcggcgcagcttgttgtccgcttgccttctatt 50464528  T

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Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4419205 - 4419133
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtg 74  Q
    |||||| |||||||||||| |||||||||  | |||||||||| ||||| |||||||||||| |||||||||||    
T  4419205 ttacgatgattggttttgccatccaaaaaatc-tagcggcgcagcttgttgcccgcttgcctcctattcatgtg 4419133  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 600857 - 600952
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    |||||| |||| ||||||| ||||||||| |  ||||| || | ||||| | |||||||||||||||||| |||||| ||||  ||||||||||||    
T  600857 ttacgatgattagttttgccatccaaaaatgtatagcgacgtagcttgttgtccgcttgccttctattcaagtgtaaataattgtttatatatata 600952  T

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Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 50442648 - 50442723
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaatta 80  Q
    ||||||||||||||| |||||||||||  ||| |||||| ||||| ||||||||| |||| |||| | ||||||||    
T  50442648 gaggattggttttgccatccaaaaagggttagtggcgcagcttgttgcccgcttgtcttccattcctttgtaatta 50442723  T

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Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9601151 - 9601061
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||| |||||  |||||||||| | || ||||||||||||| | ||||||| |||||||||  ||||| ||||||||| |||||||    
T  9601151 ttacgaggattgattttgtcatccaaaaag-cttaacggcgcaacttgttgtccgcttgtcttctattc--gtgtacttaatcattcatatata 9601061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50463108 - 50463170
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgcctt 63  Q
    ||||||||||| ||||||| |||||||||| |||||||||||| ||||  | |||||||||||    
T  50463108 ttacgaggatttgttttgccatccaaaaagacctagcggcgcagcttgctgtccgcttgcctt 50463170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 15785278 - 15785365
Alignment:
Q  14 ttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatataaaata 101  Q
    |||||| |||||||| ||| ||||  | |||||||| | || |||| ||||||||||||||||||||||| || | |||||| |||||    
T  15785278 ttttgcaatccaaaacggcatagcaacacaacttgttgtccacttgtcttctattcatgtgtaattaatctttaaaatatattaaata 15785365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 42455795 - 42455866
Alignment:
Q  24 caaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    ||||||||  |||| || |||||||| || |||||||||||||||||| ||||||| ||| || ||||||||    
T  42455795 caaaaaggtttagcagcacaacttgttgctcgcttgccttctattcatatgtaatttatctttgatatatat 42455866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23255655 - 23255585
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcat 71  Q
    |||||||||||| |||||| ||||| ||| | ||||||||||| ||||| | |||||| ||| ||||||||    
T  23255655 ttacgaggattgattttgccatccagaaaagtctagcggcgcagcttgttgtccgcttacctcctattcat 23255585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 41372252 - 41372314
Alignment:
Q  20 tatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||| ||||| ||||| ||||||||||| | | |||||||| |||||||||||||| ||||    
T  41372252 tatccacaaaggtctagcagcgcaacttgttgtctgcttgcctcctattcatgtgtaagtaat 41372314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 53170452 - 53170360
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    |||||||||| |||||||||| ||||||| ||||| | ||| || || | | ||||||||||||||||  ||||| ||||  ||||||||||||    
T  53170452 acgaggattgattttgctatctaaaaaggtctagcagtgcagct-gttgtctgcttgccttctattcaaatgtaaataatggtttatatatata 53170360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 55933625 - 55933698
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtg 74  Q
    |||||| ||||| |||||| ||||||||| | |||||| ||||  |||| | |||||||||| |||||||||||    
T  55933625 ttacgatgattgattttgccatccaaaaaagtctagcgacgcagtttgttgtccgcttgcctcctattcatgtg 55933698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 38649282 - 38649318
Alignment:
Q  146 aaccctaaacaagaagcattgaataagaaaattaaaa 182  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  38649282 aaccctagacaagaaacattgaataagaaaattaaaa 38649318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42921640 - 42921545
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    |||| |||||||||||||| ||||||||||  ||||||||||| |||||  ||| ||||||||||||||| |||||| |||| |||||||||||||    
T  42921640 ttacaaggattggttttgccatccaaaaagatctagcggcgcagcttgtttcccacttgccttctattcaagtgtaaataatgatttatatatata 42921545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2566260 - 2566352
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatat 93  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||||||| |||| |||||||| | ||||  ||||| |||| ||||||||||    
T  2566260 ttacgaggattgattttgccatccaaaaaggtctagcggcgcaacttgttgcccacttgccttattttcaattgtaaataatgatttatatat 2566352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 37873807 - 37873897
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttg-ccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||  |||| ||| | ||||||||||||||| ||||||||| |||||||    
T  37873807 gaggattgattttgctatcaaaaaaggcctagcggtgcaacttgttacccgtttgtctttctattcatgtgtatttaatcattgatatata 37873897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11005820 - 11005757
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttc 64  Q
    |||| |||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||    
T  11005820 ttactaggattggttttgccatccaaaaaggcttagcggcgcagcttgttgcccgcttgccttc 11005757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13167075 - 13167156
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||| ||||| || || |||||||||||  ||||||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  13167075 ttacgatgattgattctgttatccaaaaagatctagcggcgcagcttgttgcccacttgcctcctattcatgtgtaattaat 13167156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2917525 - 2917601
Alignment:
Q  1 ttacgaggattggtttt-gctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgta 76  Q
    ||||||||||||||||| || ||||||||||| |||||||||||  |||| ||| |||||||| |||||||||||||    
T  2917525 ttacgaggattggtttttgccatccaaaaaggtctagcggcgcagtttgttgcctgcttgcctcctattcatgtgta 2917601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32269962 - 32270054
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||| ||| || ||||||||| || |||||| ||| |||||  ||||||||||||||||||| |||||| ||||  ||||||||||    
T  32269962 ttacgaggattgatttcgccatccaaaaaagcatagcgg-gcagcttgttacccgcttgccttctattcaagtgtaaataatattttatatata 32270054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 33467040 - 33466955
Alignment:
Q  9 attggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||||| ||||||| |||||| |  |||||| | |  ||||||||||||||| || |||||||||||||| |||||||    
T  33467040 attggttttgctattcaaaaagacctagcagtccaacttattgttcgcttgccttctattgatatgtaattaatcattgatatata 33466955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35310390 - 35310309
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||| ||||||||||| ||||||| |||  || || |||| ||||| |||||||||||| |||||||||||||| ||||    
T  35310390 ttacgagaattggttttgccatccaaagaggtttaacgacgcagcttgttgcccgcttgcctcctattcatgtgtaagtaat 35310309  T

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Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 33692226 - 33692298
Alignment:
Q  10 ttggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||| | ||||||||||  ||||||||||| ||||| ||| |||||||| |||||||||||||| ||||    
T  33692226 ttggtttttccatccaaaaagatctagcggcgcagcttgttgcctgcttgcctcctattcatgtgtaagtaat 33692298  T

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Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 15292194 - 15292283
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||| |||||| ||||||||| || | ||||||||  |||| |||| ||||||||||||||| || ||| ||||  ||||||||||    
T  15292194 gaggattgattttgccatccaaaaaagcttggcggcgcagtttgttgcccacttgccttctattcaagtataaataatggtttatatata 15292283  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15506780 - 15506843
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttc 64  Q
    |||||||||||| |||| | ||| ||||||||||| ||||||||||||| || || ||||||||    
T  15506780 ttacgaggattgattttaccatcaaaaaaggcctaacggcgcaacttgttgctcgtttgccttc 15506843  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 430544 - 430471
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtg 74  Q
    |||||||||||| || ||| ||||||||||| ||| ||| ||| ||||| | | |||||||| |||||||||||    
T  430544 ttacgaggattgattatgccatccaaaaaggtctatcggtgcagcttgtngtctgcttgcctcctattcatgtg 430471  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 27913541 - 27913491
Alignment:
Q  32 cctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    |||||||||||| ||||| ||||||||||||||||| | ||||||| ||||    
T  27913541 cctagcggcgcagcttgttgcccgcttgccttctatccttgtgtaaataat 27913491  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 35993310 - 35993352
Alignment:
Q  53 ccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||    
T  35993310 ccgcttgctttctattcatgtgtagttaatcattgatatatat 35993352  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 26212752 - 26212841
Alignment:
Q  5 gaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||||||||||||  ||| |||||  |||| | |||||  | | |||||||||| ||||||||| |||||| |||| |||||||||||    
T  26212752 gaggattggttttgccttccgaaaagatctagtgacgcaatatattgcccgcttgctttctattcaagtgtaaataatgatttatatata 26212841  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23023537 - 23023461
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaa 77  Q
    |||||| ||||| |||||  |||||||||||||||| |||||| ||| | | ||| ||||||| |||| ||||||||    
T  23023537 ttacgaagattgattttgtcatccaaaaaggcctaggggcgcatcttattgtccgtttgccttttatttatgtgtaa 23023461  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 35455915 - 35455823
Alignment:
Q  2 tacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatata 94  Q
    |||||| |||||||||||  |||||||| | ||||| ||| | ||||| ||  | ||  ||||||||||||||||||||||| || |||||||    
T  35455915 tacgagaattggttttgccgtccaaaaatgtctagcagcggagcttgttgcatgtttatcttctattcatgtgtaattaatctttcatatata 35455823  T

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Target: scaffold0406 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6830 - 6754
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaa 77  Q
    ||||||| ||||||||||| ||||||||||| |||||| |||| ||||| |||||||||||||||||||| ||||||    
T  6830 ttacgagaattggttttgccatccaaaaaggtctagcgccgcagcttgttgcccgcttgccttctattcaagtgtaa 6754  T

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Target: scaffold0309 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 5264 - 5175
Alignment:
Q  3 acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatata 92  Q
    ||||||||||  ||||| ||||||||||| ||||||||||| ||||| |||||||||| ||||||||| |||||| ||||  ||||||||    
T  5264 acgaggattgactttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcattctattcaagtgtaaataatggtttatata 5175  T

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Target: scaffold0148 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33192 - 33097
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatata 96  Q
    |||||||||||| |||||  |||||||||||| | |||| ||| ||||| ||| |||||||||||||||| |||||| ||||  | ||||||||||    
T  33192 ttacgaggattgattttgtcatccaaaaaggcttggcggtgcagcttgttgcctgcttgccttctattcaagtgtaaataatggtgtatatatata 33097  T

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Target: scaffold1768 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 349 - 430
Alignment:
Q  1 ttacgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaat 82  Q
    ||||||||||| ||||||| |||||||||||| | | |||||| ||||| ||| |||| ||||||||||| |||||| ||||    
T  349 ttacgaggattagttttgccatccaaaaaggctttgtggcgcatcttgttgccggctttccttctattcaagtgtaaataat 430  T

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Target: scaffold0186 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 10286 - 10225
Alignment:
Q  34 tagcggcgcaacttgtcgcccgcttgccttctattcatgtgtaattaatcatttatatatat 95  Q
    ||||||| |||||||| ||| |||||||||||||||| ||||||||||  ||| ||||||||    
T  10286 tagcggcacaacttgttgcctgcttgccttctattcacgtgtaattaactattgatatatat 10225  T

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