View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16503_low_28 (Length: 224)
Name: NF16503_low_28
Description: NF16503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16503_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 44453174 - 44452969
Alignment:
| Q |
1 |
atttaatagagtacgtgaaaaatattgtgcttatgaagagaataaattcattgatcagcatgatagcttacttttaattctagctctccaattgatgccg |
100 |
Q |
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| T |
44453174 |
atttaatagagtacgtgaaaaatattgtgcttatgaagagaataaattcattgatcagcatgatagcttacttttaattctagctctccaattgatgccg |
44453075 |
T |
|
| Q |
101 |
tatcacataagttagtgagcaagaattccacctgcaaagagattgaagttatataggtttaaaatttcagaacaagagttattaatgaagactgtataat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44453074 |
tatcacataagttagtgagcaagaattccacctgcaaagagattgaagttatataggtttaaaatttcagaacaagagttattaatgaagactgtataat |
44452975 |
T |
|
| Q |
201 |
aatgtt |
206 |
Q |
| |
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|||||| |
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| T |
44452974 |
aatgtt |
44452969 |
T |
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