View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16503_low_8 (Length: 514)

Name: NF16503_low_8
Description: NF16503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16503_low_8
NF16503_low_8
[»] chr3 (17 HSPs)
chr3 (325-495)||(13830862-13831033)
chr3 (74-145)||(13830255-13830326)
chr3 (282-326)||(32651439-32651483)
chr3 (282-325)||(9557351-9557394)
chr3 (224-261)||(13830399-13830436)
chr3 (282-326)||(21960582-21960626)
chr3 (282-326)||(30311337-30311381)
chr3 (287-326)||(3427554-3427593)
chr3 (293-326)||(17765169-17765202)
chr3 (293-326)||(19066489-19066522)
chr3 (282-326)||(11642210-11642254)
chr3 (282-326)||(15048062-15048106)
chr3 (282-326)||(20501727-20501771)
chr3 (282-326)||(28703405-28703449)
chr3 (282-310)||(28928896-28928924)
chr3 (282-326)||(39253728-39253772)
chr3 (282-326)||(44743856-44743900)
[»] chr4 (13 HSPs)
chr4 (289-328)||(46545749-46545788)
chr4 (282-326)||(3743111-3743155)
chr4 (290-326)||(21375816-21375852)
chr4 (282-326)||(38869799-38869843)
chr4 (294-328)||(6895040-6895074)
chr4 (282-327)||(12821999-12822044)
chr4 (293-326)||(31759659-31759692)
chr4 (282-326)||(5450124-5450168)
chr4 (282-326)||(23377987-23378031)
chr4 (282-326)||(37109352-37109396)
chr4 (282-326)||(39509101-39509145)
chr4 (282-326)||(47044748-47044792)
chr4 (282-326)||(51250523-51250567)
[»] chr6 (3 HSPs)
chr6 (281-326)||(28363967-28364012)
chr6 (293-326)||(14199948-14199981)
chr6 (282-326)||(17169847-17169891)
[»] chr8 (8 HSPs)
chr8 (284-328)||(24675511-24675555)
chr8 (282-326)||(19703488-19703532)
chr8 (282-328)||(12281525-12281571)
chr8 (281-326)||(3305189-3305234)
chr8 (282-326)||(7140740-7140784)
chr8 (282-322)||(28636348-28636388)
chr8 (282-322)||(28644082-28644122)
chr8 (282-322)||(28653034-28653074)
[»] chr7 (12 HSPs)
chr7 (281-326)||(20952150-20952195)
chr7 (282-326)||(9608630-9608674)
chr7 (282-326)||(9836202-9836246)
chr7 (282-322)||(42262100-42262140)
chr7 (282-326)||(45709709-45709753)
chr7 (283-326)||(29916809-29916852)
chr7 (293-326)||(2962501-2962534)
chr7 (282-326)||(17041013-17041057)
chr7 (282-326)||(22760894-22760938)
chr7 (286-326)||(25242031-25242071)
chr7 (282-326)||(26459411-26459455)
chr7 (282-326)||(41519111-41519155)
[»] chr5 (7 HSPs)
chr5 (285-326)||(21086748-21086789)
chr5 (282-322)||(43230779-43230819)
chr5 (281-326)||(43442226-43442271)
chr5 (282-326)||(84855-84899)
chr5 (282-326)||(14495806-14495850)
chr5 (282-326)||(27596358-27596402)
chr5 (282-326)||(29075812-29075856)
[»] chr2 (12 HSPs)
chr2 (282-326)||(37480106-37480150)
chr2 (289-326)||(4060215-4060252)
chr2 (282-311)||(4438995-4439024)
chr2 (293-326)||(7799036-7799069)
chr2 (281-326)||(29503301-29503346)
chr2 (281-326)||(33962785-33962830)
chr2 (285-318)||(34041597-34041630)
chr2 (292-325)||(35916127-35916160)
chr2 (286-326)||(14500312-14500352)
chr2 (282-326)||(19244140-19244184)
chr2 (290-326)||(21939124-21939160)
chr2 (282-326)||(42327396-42327440)
[»] chr1 (12 HSPs)
chr1 (282-326)||(15786321-15786365)
chr1 (281-321)||(41508861-41508901)
chr1 (286-326)||(51814529-51814569)
chr1 (282-326)||(52336775-52336819)
chr1 (289-328)||(27567121-27567160)
chr1 (286-326)||(2799897-2799937)
chr1 (282-326)||(8177183-8177227)
chr1 (282-326)||(10526854-10526898)
chr1 (282-326)||(12587301-12587345)
chr1 (282-326)||(19528328-19528372)
chr1 (282-326)||(22049829-22049873)
chr1 (282-326)||(33700774-33700818)
[»] scaffold0291 (1 HSPs)
scaffold0291 (285-326)||(2471-2512)
[»] scaffold0004 (1 HSPs)
scaffold0004 (281-326)||(81565-81610)
[»] scaffold0299 (1 HSPs)
scaffold0299 (282-326)||(11559-11603)
[»] scaffold0194 (1 HSPs)
scaffold0194 (286-326)||(13047-13087)


Alignment Details
Target: chr3 (Bit Score: 116; Significance: 9e-59; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 325 - 495
Target Start/End: Original strand, 13830862 - 13831033
Alignment:
Q  325 ttttgaattgtaaagttcatatttttccttttatttatcatcttctcgtggg-aatagtgtttgggaggaatcttcttcgagttttggggtcgggttgtt 423  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||||||||| ||| |||||||||||| || |||||    
T  13830862 ttttgaattgtaaagttcatatttttccttttatttatcatcttgtggtggggaataatgtttgggaggaatctacttggagttttggggttggattgtt 13830961  T
Q  424 gtgatcaattccaattttatatatgcctctctttaaaatgtcaaagggtgtctggagaaaatttggcaaggg 495  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  13830962 gtgattaattccgattttctatatgcctctctttaaaatgtcaaagggtgtgtggagaaaaattggcaaggg 13831033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 13830255 - 13830326
Alignment:
Q  74 atgatgcaaaatatgcacatttacctgatgaagtttaaggtcgattttcttcaatataagtggtattcctcc 145  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13830255 atgatgcaaaatatgcacatttacctgatgaagtttaaggtcaattttcttcaatataagtggtattcctcc 13830326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 32651483 - 32651439
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  32651483 ttgggacctgggagtgtgctcctcctcaagatctcagattcgatt 32651439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 9557351 - 9557394
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgat 325  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||    
T  9557351 ttgggatctgagagtgtgctcctcctcgagatctcaggttcgat 9557394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 13830399 - 13830436
Alignment:
Q  224 agaaaaattagagagggagagagacaaatagggttgta 261  Q
    |||||||| |||||||||||||||||||||||||||||    
T  13830399 agaaaaatcagagagggagagagacaaatagggttgta 13830436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 21960582 - 21960626
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| |||||||||||||||||||| || ||||||||||||||    
T  21960582 ttgggacctgagagtgtgctcctcctcgaggtctcagattcgatt 21960626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 30311337 - 30311381
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||    
T  30311337 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 30311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 3427593 - 3427554
Alignment:
Q  287 atctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  3427593 atctgggagtgtgctcctcctcaaggtctcagattcgatt 3427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 17765169 - 17765202
Alignment:
Q  293 gagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||||||||||||||||||| |||||||    
T  17765169 gagtgtgctcctcctcaagatctcaggttcgatt 17765202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 19066489 - 19066522
Alignment:
Q  293 gagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||||||||||||||||||| |||||||    
T  19066489 gagtgtgctcctcctcaagatctcaggttcgatt 19066522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 11642254 - 11642210
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||||| |||| ||||||||||| |||||| |||||||    
T  11642254 ttgggatctgagattgtgatcctcctcaaggtctcaggttcgatt 11642210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 15048106 - 15048062
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| || |||||||||||||||| |||||| |||||||    
T  15048106 ttgggatctgggaatgtgctcctcctcaaggtctcaggttcgatt 15048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 20501727 - 20501771
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||||||||||||||||||| ||| |||||| |||||||    
T  20501727 ttgggacctgagagtgtgctcctccttaaggtctcaggttcgatt 20501771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 28703449 - 28703405
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||||| ||||| |||||| |||||||    
T  28703449 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgatt 28703405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 310
Target Start/End: Complemental strand, 28928924 - 28928896
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaa 310  Q
    |||||||||||||||||||||||||||||    
T  28928924 ttgggatctgagagtgtgctcctcctcaa 28928896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 39253728 - 39253772
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||||| ||||| |||||| |||||||    
T  39253728 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgatt 39253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 44743900 - 44743856
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| |||||||||||||||| || |||||| |||||||    
T  44743900 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 44743856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 46545749 - 46545788
Alignment:
Q  289 ctgagagtgtgctcctcctcaagatctcagattcgatttt 328  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46545749 ctgagagtgtgctcctcctcaagatctcagattcgatttt 46545788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 3743155 - 3743111
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||    
T  3743155 ttgggatctaagagtgtgttcctcctcaagatcttagattcgatt 3743111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 21375816 - 21375852
Alignment:
Q  290 tgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||||||||||||||| ||||||||||||||    
T  21375816 tgagagtgtgctcctcctcaagctctcagattcgatt 21375852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 38869799 - 38869843
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||    
T  38869799 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 38869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 328
Target Start/End: Complemental strand, 6895074 - 6895040
Alignment:
Q  294 agtgtgctcctcctcaagatctcagattcgatttt 328  Q
    |||||||||||||||||||||||| ||||||||||    
T  6895074 agtgtgctcctcctcaagatctcaaattcgatttt 6895040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 12821999 - 12822044
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgattt 327  Q
    |||||||||| ||||||||||||  ||||| |||||||||||||||    
T  12821999 ttgggatctgggagtgtgctcctgttcaaggtctcagattcgattt 12822044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Complemental strand, 31759692 - 31759659
Alignment:
Q  293 gagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||||||||||| ||||||||||||||    
T  31759692 gagtgtgctcctcctcaaggtctcagattcgatt 31759659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 5450124 - 5450168
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||| ||||| ||||||||||||||||||| | ||||||||||||    
T  5450124 ttggaatctgggagtgtgctcctcctcaaggtttcagattcgatt 5450168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 23377987 - 23378031
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||    
T  23377987 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 23378031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 37109396 - 37109352
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||    
T  37109396 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 37109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 39509101 - 39509145
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| |||||||||||||||| || |||||| |||||||    
T  39509101 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 39509145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 47044748 - 47044792
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||||||| ||||||||||| || |||||| |||||||    
T  47044748 ttgggatctgagagtttgctcctcctcgaggtctcaggttcgatt 47044792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 51250567 - 51250523
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||| |||||||||||||  |||||||    
T  51250567 ttgggatctgggagtgtgctccgcctcaagatctcaagttcgatt 51250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 28363967 - 28364012
Alignment:
Q  281 tttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  28363967 tttgggatctgcgagtgtgctcctcctcaaggtctcagattcgatt 28364012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Complemental strand, 14199981 - 14199948
Alignment:
Q  293 gagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||||||||||| ||||||||||||||    
T  14199981 gagtgtgctcctcctcaaggtctcagattcgatt 14199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 17169847 - 17169891
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||  ||||||||||||| ||||||||||||| ||||||    
T  17169847 ttgggatcttggagtgtgctcctcatcaagatctcagactcgatt 17169891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 24675555 - 24675511
Alignment:
Q  284 gggatctgagagtgtgctcctcctcaagatctcagattcgatttt 328  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  24675555 gggatctgagagtgtgctccttctcaaggtctcagattcgatttt 24675511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 19703532 - 19703488
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||    
T  19703532 ttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 19703488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 12281525 - 12281571
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatttt 328  Q
    |||||| |||||||||||| ||||||| || ||||||||||||||||    
T  12281525 ttgggacctgagagtgtgcccctcctcgaggtctcagattcgatttt 12281571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 3305234 - 3305189
Alignment:
Q  281 tttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  3305234 tttgggatctgggagcgtgctcctcctcaaggtctcaaattcgatt 3305189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 7140740 - 7140784
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| | |||||||||||||| || ||||||||||||||    
T  7140740 ttgggatctgggtgtgtgctcctcctcgagctctcagattcgatt 7140784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 28636388 - 28636348
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattc 322  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  28636388 ttgggatctgggagtgtactcttcctcaagatctcagattc 28636348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 28644122 - 28644082
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattc 322  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  28644122 ttgggatctgggagtgtactcttcctcaagatctcagattc 28644082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 28653074 - 28653034
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattc 322  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  28653074 ttgggatctgggagtgtactcttcctcaagatctcagattc 28653034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 20952195 - 20952150
Alignment:
Q  281 tttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||    
T  20952195 tttgggacctgggagtgtgctcctcctcaaaatctcagattcgatt 20952150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 9608674 - 9608630
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||    
T  9608674 ttgggatctgggagtgtcctcctcctcaagatctcaggttcgatt 9608630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 9836246 - 9836202
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||    
T  9836246 ttgggatctgggagtgtcctcctcctcaagatctcaggttcgatt 9836202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 42262140 - 42262100
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattc 322  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  42262140 ttgggatctgagagtgtgctcctcctaaaggtctcagattc 42262100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 45709753 - 45709709
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||||||||||||||||||| || |||||| |||||||    
T  45709753 ttgggatctgagagtgtgctcctcctcgaggtctcaggttcgatt 45709709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 326
Target Start/End: Complemental strand, 29916852 - 29916809
Alignment:
Q  283 tgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||| |||||||||||||||||||| |||||| |||||||    
T  29916852 tgggatctaagagtgtgctcctcctcaaggtctcaggttcgatt 29916809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 2962501 - 2962534
Alignment:
Q  293 gagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||||||||||||||||||| |||||||    
T  2962501 gagtgtgctcctcctcaagatctcaggttcgatt 2962534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 17041057 - 17041013
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||  |||||||||||||||||| |||||| |||||||    
T  17041057 ttgggatctggaagtgtgctcctcctcaaggtctcaggttcgatt 17041013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 22760894 - 22760938
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||    
T  22760894 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 22760938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 25242031 - 25242071
Alignment:
Q  286 gatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  25242031 gatctgagagtatgctcctcctcgaggtctcagattcgatt 25242071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 26459455 - 26459411
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||    
T  26459455 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 26459411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 41519155 - 41519111
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||| | ||||||||||||| |||||| ||||||||||||||    
T  41519155 ttgggatttaagagtgtgctccttctcaaggtctcagattcgatt 41519111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 326
Target Start/End: Original strand, 21086748 - 21086789
Alignment:
Q  285 ggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  21086748 ggatctggcagtgtgctcctcctcaagatctcagattcgatt 21086789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 43230819 - 43230779
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattc 322  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  43230819 ttgggttctgagagtgtgctcctccttaagatctcagattc 43230779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 43442226 - 43442271
Alignment:
Q  281 tttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||| |||||| ||||||||||||||||||| |||||| |||||||    
T  43442226 tttgagatctgggagtgtgctcctcctcaaggtctcaggttcgatt 43442271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 84855 - 84899
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||||||||||| |||||  |||||||    
T  84855 ttgggatctgggagtgtgctcctcctcaaggtctcaagttcgatt 84899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 14495850 - 14495806
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| |||||||||||||||| || ||||||||| ||||    
T  14495850 ttgggatctgggagtgtgctcctcctcgaggtctcagatttgatt 14495806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 27596358 - 27596402
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||||||||| ||||||||| || ||| ||||||||||    
T  27596358 ttgggatctgagagtgtcctcctcctcgaggtcttagattcgatt 27596402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 29075812 - 29075856
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| |||||||||||||||| ||||||||  |||||||    
T  29075812 ttgggatctgggagtgtgctcctcctcgagatctcatgttcgatt 29075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 37480106 - 37480150
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||    
T  37480106 ttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 37480150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 4060252 - 4060215
Alignment:
Q  289 ctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  4060252 ctgagagtgtgcttctcctcaagatctcaggttcgatt 4060215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 311
Target Start/End: Complemental strand, 4439024 - 4438995
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaag 311  Q
    ||||||||||||||||||||||||||||||    
T  4439024 ttgggatctgagagtgtgctcctcctcaag 4438995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Complemental strand, 7799069 - 7799036
Alignment:
Q  293 gagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||||||||| |||||||||||||||||    
T  7799069 gagtgtgctcctcctcgagatctcagattcgatt 7799036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 29503301 - 29503346
Alignment:
Q  281 tttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||| ||| ||||||||||||||||||| |||||| |||||||    
T  29503301 tttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 29503346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 33962830 - 33962785
Alignment:
Q  281 tttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||| ||| |||||||||||||||| ||||||| |||||||||    
T  33962830 tttgggaactgggagtgtgctcctcctcgagatctcggattcgatt 33962785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 34041630 - 34041597
Alignment:
Q  285 ggatctgagagtgtgctcctcctcaagatctcag 318  Q
    ||||||||||||||||||||||||||| ||||||    
T  34041630 ggatctgagagtgtgctcctcctcaaggtctcag 34041597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 35916127 - 35916160
Alignment:
Q  292 agagtgtgctcctcctcaagatctcagattcgat 325  Q
    |||||||| |||||||||||||||||||||||||    
T  35916127 agagtgtgttcctcctcaagatctcagattcgat 35916160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 14500312 - 14500352
Alignment:
Q  286 gatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| |||||||||||||||| || ||||||||||||||    
T  14500312 gatctgggagtgtgctcctcctctaggtctcagattcgatt 14500352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 19244140 - 19244184
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| |||||||||||||||||| |||| |||||| |||||||    
T  19244140 ttgggacctgagagtgtgctcctccccaaggtctcaggttcgatt 19244184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 21939160 - 21939124
Alignment:
Q  290 tgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  21939160 tgagagtgtgctcctcctcgagatctcaggttcgatt 21939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 42327440 - 42327396
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||    
T  42327440 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 42327396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 15786365 - 15786321
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||    
T  15786365 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 15786321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 41508861 - 41508901
Alignment:
Q  281 tttgggatctgagagtgtgctcctcctcaagatctcagatt 321  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  41508861 tttgggatctgggagtgtgctcctcctcaaggtctcagatt 41508901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 51814529 - 51814569
Alignment:
Q  286 gatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  51814529 gatctgagagtgtgctcctcctcaaggtctcaggttcgatt 51814569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 52336819 - 52336775
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||||||| |||||||||| |||||||    
T  52336819 ttgggatctgggagtgtgctcctccttaagatctcaggttcgatt 52336775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 27567160 - 27567121
Alignment:
Q  289 ctgagagtgtgctcctcctcaagatctcagattcgatttt 328  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  27567160 ctgagagtgtgctcctcttcaaggtctcagattcgatttt 27567121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 2799897 - 2799937
Alignment:
Q  286 gatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||||||||||||||||||| |||||| |||||||    
T  2799897 gatctgggagtgtgctcctcctcaaggtctcaggttcgatt 2799937  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 8177227 - 8177183
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| ||||||||||||||||||| | |||| |||||||    
T  8177227 ttgggatctgggagtgtgctcctcctcaaggtttcaggttcgatt 8177183  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 10526854 - 10526898
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||| |||| |||||||||||||| ||||||||||||||    
T  10526854 ttgggacctgggagtttgctcctcctcaaggtctcagattcgatt 10526898  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 12587301 - 12587345
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| |||||||||||||||| || |||||| |||||||    
T  12587301 ttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgatt 12587345  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 19528372 - 19528328
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||  ||||||||||||||||||| |||||| |||||||    
T  19528372 ttgggatctatgagtgtgctcctcctcaaggtctcaggttcgatt 19528328  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 22049873 - 22049829
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||||||||||||| ||||||||| | | ||||||||||    
T  22049873 ttgggatctgagagtgtgcttctcctcaaggtttgagattcgatt 22049829  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 33700818 - 33700774
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||| ||||| ||||||||||||||||||| |||||| |||||||    
T  33700818 ttggaatctgggagtgtgctcctcctcaaggtctcaggttcgatt 33700774  T

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Target: scaffold0291 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 326
Target Start/End: Complemental strand, 2512 - 2471
Alignment:
Q  285 ggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||||| ||||||||||||||||||| |||||| |||||||    
T  2512 ggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 2471  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 81610 - 81565
Alignment:
Q  281 tttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    ||||| |||||  |||||||||||||||||| ||||||||||||||    
T  81610 tttggaatctggaagtgtgctcctcctcaaggtctcagattcgatt 81565  T

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Target: scaffold0299 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 11559 - 11603
Alignment:
Q  282 ttgggatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||||||| |||||||||||||||| || |||||| |||||||    
T  11559 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 11603  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 13087 - 13047
Alignment:
Q  286 gatctgagagtgtgctcctcctcaagatctcagattcgatt 326  Q
    |||||| ||||||||||||||||||| |||||| |||||||    
T  13087 gatctgggagtgtgctcctcctcaaggtctcaggttcgatt 13047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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