View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16504_high_50 (Length: 255)
Name: NF16504_high_50
Description: NF16504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16504_high_50 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 70 - 255
Target Start/End: Complemental strand, 37296420 - 37296235
Alignment:
| Q |
70 |
gtcacttcctcatcacaatccaaaaccctaatcctctttcagatcacaataatggacggtgattcctcttggtcttctcgtctctcttccgcttccagac |
169 |
Q |
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| T |
37296420 |
gtcacttcctcatcacaatccaaaaccctaatcctctttcagatcacaatcatggacggtgattcttcttggtcttctcgtctctcttccgcttccagac |
37296321 |
T |
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| Q |
170 |
gttatcaagccgctcttcaatcccgatcaggttccttcttcttctcgaaacccctttcccccaatttctttctctctacctcaatt |
255 |
Q |
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| T |
37296320 |
gttatcaagccgctcttcaatcccgatcaggttccttcttcttctcgaaacccctttcccccaatttctttctctctacctcaatt |
37296235 |
T |
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