View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16504_high_57 (Length: 232)
Name: NF16504_high_57
Description: NF16504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16504_high_57 |
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Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 24617593 - 24617784
Alignment:
| Q |
14 |
cacagaatataaaggatttagagaataataattgtttatttccgttatcataagttgaatatatattggctgtatgatgcgtcatgtgtctggtccaagt |
113 |
Q |
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| T |
24617593 |
cacaaaatataaagaatttagaaaataataattgtttatttccgttatcataagttgaatatatattggctgtatgatg-------tgtctggtccaagt |
24617685 |
T |
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| Q |
114 |
cataggcaggaaggtgaaagaattttcttttttggtgatggaaggtgaaataatttaatgataggtcttttgtgtagagtatataaatagtgtagagcg |
212 |
Q |
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|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24617686 |
cataagcaggaaggtgaaagaattttcttttttggagatggaaggtgaaataatttaatgataggtcttttgtgtagagtatataaatagtgtagagcg |
24617784 |
T |
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