View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16504_low_21 (Length: 434)

Name: NF16504_low_21
Description: NF16504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16504_low_21
NF16504_low_21
[»] chr2 (32 HSPs)
chr2 (78-417)||(43623080-43623420)
chr2 (1-73)||(43623500-43623572)
chr2 (1-73)||(7462866-7462939)
chr2 (1-73)||(21520611-21520685)
chr2 (1-73)||(42923428-42923501)
chr2 (1-73)||(17849380-17849451)
chr2 (1-73)||(19007903-19007974)
chr2 (1-73)||(22407375-22407446)
chr2 (1-73)||(28196898-28196969)
chr2 (1-69)||(22162949-22163014)
chr2 (1-73)||(3022435-3022506)
chr2 (1-73)||(6264069-6264140)
chr2 (1-73)||(15539450-15539521)
chr2 (1-62)||(45238931-45238989)
chr2 (5-73)||(40031973-40032041)
chr2 (1-73)||(6258738-6258809)
chr2 (1-73)||(14837531-14837602)
chr2 (1-73)||(22707672-22707743)
chr2 (29-73)||(38020370-38020414)
chr2 (1-73)||(44288988-44289059)
chr2 (1-73)||(28459113-28459182)
chr2 (1-73)||(5375266-5375338)
chr2 (1-71)||(17848703-17848770)
chr2 (1-71)||(22287259-22287328)
chr2 (20-73)||(13909961-13910012)
chr2 (20-73)||(45279917-45279968)
chr2 (29-73)||(34979510-34979554)
chr2 (4-62)||(23871082-23871139)
chr2 (20-74)||(24162138-24162190)
chr2 (27-73)||(38414103-38414149)
chr2 (20-73)||(23452153-23452204)
chr2 (20-73)||(27105085-27105136)
[»] chr1 (48 HSPs)
chr1 (1-73)||(47906557-47906629)
chr1 (1-73)||(27336861-27336934)
chr1 (1-73)||(27339052-27339125)
chr1 (1-73)||(28206989-28207062)
chr1 (12-73)||(23816187-23816248)
chr1 (1-73)||(39462806-39462879)
chr1 (1-73)||(50307466-50307539)
chr1 (15-73)||(25860325-25860383)
chr1 (1-73)||(12302428-12302499)
chr1 (1-73)||(25251197-25251268)
chr1 (1-73)||(15823833-15823907)
chr1 (15-73)||(6995616-6995674)
chr1 (1-73)||(2949155-2949226)
chr1 (1-73)||(4131298-4131369)
chr1 (1-73)||(14097892-14097963)
chr1 (1-73)||(18307396-18307467)
chr1 (1-73)||(50248493-50248564)
chr1 (2-73)||(18839876-18839946)
chr1 (14-73)||(47451930-47451989)
chr1 (3-73)||(13215373-13215442)
chr1 (1-73)||(38925406-38925475)
chr1 (5-73)||(50078712-50078782)
chr1 (10-73)||(28998173-28998233)
chr1 (10-73)||(29003889-29003949)
chr1 (1-73)||(11457398-11457469)
chr1 (15-73)||(2617824-2617880)
chr1 (29-73)||(3579506-3579550)
chr1 (1-73)||(17319174-17319245)
chr1 (1-69)||(31424942-31425009)
chr1 (1-73)||(50076596-50076666)
chr1 (3-66)||(6756817-6756877)
chr1 (1-73)||(31490199-31490270)
chr1 (1-73)||(41647207-41647278)
chr1 (20-73)||(10399746-10399797)
chr1 (20-73)||(13447191-13447242)
chr1 (20-73)||(13762148-13762199)
chr1 (20-73)||(15294752-15294803)
chr1 (20-73)||(51750351-51750402)
chr1 (3-73)||(9241010-9241077)
chr1 (29-73)||(17324388-17324432)
chr1 (8-73)||(17324555-17324618)
chr1 (1-57)||(16428941-16428994)
chr1 (20-70)||(20291768-20291816)
chr1 (20-70)||(20302753-20302801)
chr1 (1-73)||(40134232-40134300)
chr1 (20-73)||(46431623-46431674)
chr1 (1-29)||(16429245-16429273)
chr1 (29-73)||(25248474-25248518)
[»] chr8 (28 HSPs)
chr8 (1-73)||(15073054-15073126)
chr8 (1-73)||(28251486-28251559)
chr8 (1-73)||(15068324-15068396)
chr8 (1-73)||(41383005-41383078)
chr8 (1-73)||(14808104-14808175)
chr8 (3-74)||(41385089-41385161)
chr8 (1-73)||(181822-181891)
chr8 (1-73)||(14419111-14419182)
chr8 (1-73)||(30480424-30480495)
chr8 (1-73)||(35872377-35872445)
chr8 (1-73)||(33541331-33541402)
chr8 (1-73)||(37214185-37214256)
chr8 (1-73)||(36865880-36865953)
chr8 (1-62)||(1225510-1225568)
chr8 (27-65)||(27911447-27911485)
chr8 (27-65)||(27957866-27957904)
chr8 (20-73)||(3874361-3874412)
chr8 (20-73)||(3883511-3883562)
chr8 (20-73)||(4424386-4424437)
chr8 (20-73)||(18811075-18811126)
chr8 (1-73)||(25952864-25952934)
chr8 (211-290)||(43440560-43440639)
chr8 (211-290)||(43743088-43743167)
chr8 (28-69)||(5372107-5372148)
chr8 (20-73)||(18813249-18813300)
chr8 (20-73)||(22684569-22684620)
chr8 (20-73)||(27827353-27827404)
chr8 (28-73)||(43530491-43530534)
[»] chr7 (40 HSPs)
chr7 (1-73)||(27306152-27306224)
chr7 (1-73)||(13099393-13099466)
chr7 (1-73)||(26804807-26804879)
chr7 (1-74)||(21592063-21592135)
chr7 (3-73)||(21680329-21680396)
chr7 (1-73)||(31434969-31435038)
chr7 (1-73)||(443893-443966)
chr7 (8-73)||(37412043-37412105)
chr7 (1-73)||(21678361-21678430)
chr7 (1-73)||(9681117-9681188)
chr7 (1-73)||(21990447-21990518)
chr7 (26-73)||(11355580-11355627)
chr7 (1-73)||(44724876-44724946)
chr7 (1-73)||(9679356-9679427)
chr7 (1-73)||(22251506-22251577)
chr7 (29-73)||(42330922-42330966)
chr7 (1-73)||(4295857-4295926)
chr7 (1-62)||(39145918-39145978)
chr7 (239-290)||(8645367-8645418)
chr7 (1-47)||(20626335-20626382)
chr7 (1-47)||(20630226-20630273)
chr7 (1-47)||(20642645-20642692)
chr7 (5-73)||(42223459-42223524)
chr7 (20-73)||(3036046-3036097)
chr7 (20-73)||(11759449-11759500)
chr7 (20-73)||(18345863-18345914)
chr7 (20-73)||(20297684-20297735)
chr7 (20-73)||(20299782-20299833)
chr7 (20-73)||(38394308-38394359)
chr7 (20-73)||(40836659-40836710)
chr7 (1-73)||(22394020-22394087)
chr7 (2-73)||(24465832-24465899)
chr7 (27-73)||(7469938-7469982)
chr7 (27-73)||(7471896-7471940)
chr7 (20-73)||(44886-44937)
chr7 (1-44)||(20137061-20137101)
chr7 (20-73)||(48457975-48458026)
chr7 (25-73)||(1850308-1850354)
chr7 (254-290)||(8642075-8642111)
chr7 (27-59)||(26295766-26295798)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-73)||(11392-11465)
[»] chr4 (48 HSPs)
chr4 (1-73)||(40637415-40637488)
chr4 (1-73)||(24879331-24879404)
chr4 (1-73)||(24889137-24889210)
chr4 (1-73)||(52942407-52942480)
chr4 (1-73)||(17662166-17662237)
chr4 (1-73)||(24880793-24880866)
chr4 (1-73)||(22800781-22800854)
chr4 (1-73)||(22802653-22802726)
chr4 (1-73)||(2891633-2891704)
chr4 (1-73)||(33415411-33415480)
chr4 (1-73)||(38928100-38928169)
chr4 (1-73)||(6133178-6133249)
chr4 (1-73)||(36921414-36921485)
chr4 (1-73)||(24446578-24446646)
chr4 (1-73)||(16453651-16453720)
chr4 (1-73)||(47563102-47563171)
chr4 (1-73)||(48486660-48486733)
chr4 (1-73)||(13547495-13547566)
chr4 (1-73)||(36919505-36919576)
chr4 (1-73)||(40091336-40091407)
chr4 (1-73)||(4215647-4215715)
chr4 (1-73)||(36380691-36380760)
chr4 (27-73)||(49088922-49088968)
chr4 (27-73)||(14787350-14787396)
chr4 (27-73)||(14789349-14789395)
chr4 (1-73)||(36378634-36378703)
chr4 (1-73)||(27499383-27499460)
chr4 (29-73)||(37313000-37313044)
chr4 (20-73)||(2484789-2484840)
chr4 (20-73)||(5635392-5635443)
chr4 (20-73)||(11437728-11437779)
chr4 (20-73)||(37089288-37089339)
chr4 (20-73)||(51015611-51015662)
chr4 (29-73)||(5101284-5101328)
chr4 (29-72)||(47275092-47275135)
chr4 (1-73)||(5664576-5664647)
chr4 (27-73)||(9148608-9148652)
chr4 (28-73)||(11435328-11435371)
chr4 (20-69)||(14633684-14633731)
chr4 (20-73)||(22044307-22044358)
chr4 (1-64)||(22295506-22295565)
chr4 (1-64)||(25357984-25358042)
chr4 (20-69)||(38409570-38409617)
chr4 (28-73)||(47210712-47210755)
chr4 (1-57)||(619387-619440)
chr4 (1-73)||(12395766-12395837)
chr4 (1-73)||(12400728-12400799)
chr4 (29-73)||(16455594-16455638)
[»] chr3 (60 HSPs)
chr3 (1-73)||(4308198-4308271)
chr3 (1-73)||(53917582-53917654)
chr3 (1-72)||(53915415-53915486)
chr3 (1-73)||(18096817-18096890)
chr3 (1-73)||(32219352-32219425)
chr3 (1-73)||(27101098-27101171)
chr3 (1-73)||(36012094-36012167)
chr3 (1-73)||(43423384-43423453)
chr3 (1-73)||(18099087-18099160)
chr3 (1-73)||(18162930-18163003)
chr3 (10-73)||(9604522-9604585)
chr3 (1-73)||(880372-880441)
chr3 (1-73)||(1313676-1313745)
chr3 (1-73)||(24979975-24980049)
chr3 (1-73)||(43421336-43421405)
chr3 (1-73)||(25688077-25688150)
chr3 (1-73)||(12267895-12267965)
chr3 (1-73)||(28181271-28181342)
chr3 (1-73)||(32263957-32264028)
chr3 (1-73)||(47148814-47148885)
chr3 (8-73)||(27635574-27635636)
chr3 (8-73)||(48361587-48361649)
chr3 (1-73)||(880161-880230)
chr3 (24-73)||(5899966-5900015)
chr3 (1-73)||(43228558-43228630)
chr3 (1-73)||(3314952-3315023)
chr3 (5-73)||(15781150-15781217)
chr3 (1-72)||(43226350-43226420)
chr3 (26-73)||(5886495-5886542)
chr3 (8-73)||(45883219-45883281)
chr3 (1-68)||(51674690-51674756)
chr3 (8-73)||(51943649-51943711)
chr3 (1-73)||(6484627-6484696)
chr3 (3-69)||(54691496-54691562)
chr3 (1-73)||(39715732-39715804)
chr3 (1-73)||(1626602-1626673)
chr3 (1-73)||(3307027-3307098)
chr3 (1-73)||(53468372-53468443)
chr3 (28-73)||(47701593-47701638)
chr3 (1-73)||(4666781-4666852)
chr3 (1-73)||(5926685-5926755)
chr3 (1-73)||(6232067-6232137)
chr3 (1-70)||(8183058-8183124)
chr3 (1-43)||(30006108-30006151)
chr3 (5-69)||(53591456-53591517)
chr3 (20-73)||(1321771-1321822)
chr3 (20-73)||(3859802-3859854)
chr3 (20-73)||(10955941-10955992)
chr3 (20-73)||(11168393-11168444)
chr3 (20-73)||(25533717-25533768)
chr3 (1-49)||(42990571-42990620)
chr3 (1-49)||(42992537-42992586)
chr3 (20-73)||(51726921-51726972)
chr3 (28-73)||(5191951-5191994)
chr3 (20-73)||(10084303-10084354)
chr3 (20-73)||(10191226-10191277)
chr3 (20-73)||(10958237-10958288)
chr3 (20-73)||(38890332-38890383)
chr3 (1-49)||(41849326-41849374)
chr3 (1-29)||(31151612-31151640)
[»] chr5 (48 HSPs)
chr5 (1-73)||(18509238-18509310)
chr5 (1-73)||(2818254-2818327)
chr5 (1-73)||(18511132-18511204)
chr5 (1-73)||(6747591-6747664)
chr5 (1-73)||(39854770-39854844)
chr5 (12-73)||(6745367-6745428)
chr5 (1-73)||(36402247-36402320)
chr5 (15-73)||(17073187-17073245)
chr5 (3-73)||(41585656-41585725)
chr5 (8-73)||(12555834-12555898)
chr5 (1-73)||(6756779-6756850)
chr5 (5-73)||(31465910-31465977)
chr5 (1-73)||(20043277-20043347)
chr5 (3-73)||(26098207-26098278)
chr5 (15-73)||(16776461-16776518)
chr5 (1-73)||(20505766-20505835)
chr5 (1-73)||(17818411-17818484)
chr5 (1-73)||(25904390-25904461)
chr5 (1-73)||(2954703-2954773)
chr5 (9-73)||(18596942-18597003)
chr5 (27-73)||(36208885-36208931)
chr5 (1-73)||(2724180-2724251)
chr5 (1-69)||(1189532-1189599)
chr5 (1-73)||(16092120-16092191)
chr5 (1-73)||(26098018-26098089)
chr5 (29-73)||(40221843-40221887)
chr5 (12-73)||(20045286-20045344)
chr5 (1-73)||(658279-658348)
chr5 (31-73)||(21948348-21948390)
chr5 (1-73)||(10474244-10474315)
chr5 (1-65)||(15143754-15143817)
chr5 (1-73)||(24127143-24127214)
chr5 (27-73)||(21289071-21289117)
chr5 (20-73)||(10529014-10529065)
chr5 (20-73)||(25804336-25804387)
chr5 (20-73)||(25921389-25921440)
chr5 (20-73)||(34476969-34477020)
chr5 (4-73)||(37705703-37705771)
chr5 (20-73)||(38882400-38882451)
chr5 (29-73)||(39397926-39397970)
chr5 (27-73)||(4236947-4236991)
chr5 (16-73)||(696176-696232)
chr5 (20-73)||(2175213-2175264)
chr5 (20-73)||(3373053-3373104)
chr5 (20-73)||(10750011-10750062)
chr5 (20-73)||(10757487-10757538)
chr5 (20-73)||(34479334-34479385)
chr5 (29-73)||(34530635-34530679)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-73)||(79481-79554)
[»] chr6 (24 HSPs)
chr6 (1-73)||(11982947-11983021)
chr6 (1-73)||(9020248-9020322)
chr6 (1-73)||(3233644-3233717)
chr6 (1-72)||(15530084-15530155)
chr6 (1-73)||(3629787-3629857)
chr6 (200-283)||(33881465-33881548)
chr6 (3-73)||(1069639-1069708)
chr6 (1-73)||(24338371-24338440)
chr6 (7-73)||(3394695-3394760)
chr6 (1-73)||(15346668-15346737)
chr6 (29-73)||(3631860-3631904)
chr6 (31-73)||(15367380-15367422)
chr6 (24-73)||(26065330-26065379)
chr6 (24-73)||(26085299-26085348)
chr6 (29-73)||(25480227-25480271)
chr6 (1-73)||(30728745-30728816)
chr6 (20-73)||(14507092-14507143)
chr6 (1-62)||(32280319-32280379)
chr6 (1-67)||(12186000-12186063)
chr6 (1-57)||(14466646-14466701)
chr6 (22-73)||(28241237-28241286)
chr6 (27-73)||(14458683-14458727)
chr6 (20-73)||(33309203-33309254)
chr6 (20-73)||(33311472-33311523)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-73)||(35890-35962)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-73)||(80155-80228)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-73)||(85527-85596)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-73)||(14305-14376)
[»] scaffold0005 (3 HSPs)
scaffold0005 (27-73)||(50335-50381)
scaffold0005 (27-73)||(52334-52380)
scaffold0005 (20-69)||(183561-183608)
[»] scaffold1674 (1 HSPs)
scaffold1674 (20-73)||(1367-1418)
[»] scaffold0339 (1 HSPs)
scaffold0339 (29-72)||(4317-4360)
[»] scaffold0038 (1 HSPs)
scaffold0038 (22-73)||(41399-41448)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-73)||(1566-1634)


Alignment Details
Target: chr2 (Bit Score: 309; Significance: 1e-174; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 78 - 417
Target Start/End: Complemental strand, 43623420 - 43623080
Alignment:
Q  78 cataattggcattgtaagatggtgccttttaatcaatgaagtcattctaaagccactccatg-atcattctatatttgcaaaaaattatctggagtgtac 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43623420 cataattggcattgtaagatggtgccttttaatcaatgaagtcattctaaagccactccatgtatcattctatatttgcaaaaaattatctggagtgtac 43623321  T
Q  177 atgttgattgtctattatagttgttgtgtctgcttcaagttgtctacgactcaacccaaaccaaagtcttgtgaaagaatcaatttggtcgctcaaatta 276  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43623320 atgttgattgtatattatagttgttgtgtctgcttcaagttgtcgacgactcaacccaaaccaaagtcttgtaaaagaatcaatttggtcgctcaaatta 43623221  T
Q  277 ggcactcgtatcaatttagttgttattattgttagaggcgagagttgaactcatgacttccgatctctatgttcctctcccaaatcactttatgtggtac 376  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43623220 ggcactcgtatcaacttagttgttattattgttagaggcgagagttgaactcatgacttccgatctctatgttcctctcccaaatcactttatgtgttac 43623121  T
Q  377 ggactatagaatagacagtgtctacattgactacgacttgt 417  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  43623120 ggactatagaataggcagtgtctacattgactacgacttgt 43623080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43623572 - 43623500
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43623572 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttatgattataattgttccatacacttt 43623500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7462939 - 7462866
Alignment:
Q  1 tgtgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7462939 tgtgttctctcttctctttctctcgctgttgttttctacttttggcttgtgattataattgtttcatacacttt 7462866  T

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Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21520685 - 21520611
Alignment:
Q  1 tgtgttctctcttcttttctctc--gctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21520685 tgtgttctctcttcgtttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 21520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42923501 - 42923428
Alignment:
Q  1 tgtgttctctcttcttttctctcgct-gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  42923501 tgtgttctctcttcttttctctctctcgttgttttctacttttgacttgtgtttataattgtttcatacacttt 42923428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17849380 - 17849451
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  17849380 tgtgttctctcttcctttctctccc-gttgttttctacttttggcttgtgtttaaaattgttccatacacttt 17849451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19007903 - 19007974
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| ||| |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  19007903 tgtgttctctattcatttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacacttt 19007974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22407446 - 22407375
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  22407446 tgtgttctctcttcctttctctctc-gatgttttctacttttggcttgtgtttataattgttccatacacttt 22407375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28196898 - 28196969
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||||| ||||||||||    
T  28196898 tgtgttctctcttcttttctctctc-gctgttttctacttttggcttgtgtttataattgtttcatacacttt 28196969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22163014 - 22162949
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccataca 69  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||| |||||| |||||||||||    
T  22163014 tgtgttctctcttcttttctctcg---ttgttttctacttttggcttgtgcttataactgttccataca 22162949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3022435 - 3022506
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||| |||| | |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  3022435 tgtgttctctcttcctttttctctc-gttgttttctgcttttggcttgtgtttataattgttccatacacttt 3022506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6264140 - 6264069
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | ||||||||||||||| |||||||| | ||||||||||||||||||||    
T  6264140 tgtgttctctcttcctttctctctc-gttgttttctactttcggcttgtgttaataattgttccatacacttt 6264069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15539521 - 15539450
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | |||||||||||||||| ||||||| |||||||||||| |||||||||    
T  15539521 tgtgttctctcttcctttctctctc-gttgttttctactttttgcttgtgtttataattgttcaatacacttt 15539450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45238989 - 45238931
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgtt 62  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||    
T  45238989 tgtgttctctcttcttttctctcgctgtt---ttctacttttggcttgtgattataactgtt 45238931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 40032041 - 40031973
Alignment:
Q  5 ttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||    
T  40032041 ttctctcttccttttctctcgctgttgttttctacattt-gcttgtgtttataattgttccatatacttt 40031973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6258809 - 6258738
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||||||| ||||||| |||||||||||||| |||||||    
T  6258809 tgtgttctctcttcctttctctctc-gctgttttctacttttagcttgtgtttataattgttccagacacttt 6258738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14837531 - 14837602
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||| ||||||||||||||| |||||||||||| |||||||||    
T  14837531 tgtgttctctcttcctttctctctc-gctgttttatacttttggcttgtgtttataattgttctatacacttt 14837602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22707743 - 22707672
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||||| || |||||| ||||||||||||||||||||||    
T  22707743 tgtgttctctcttcctttctctctc-gctgttttctacttctgccttgtgtttataattgttccatacacttt 22707672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 38020370 - 38020414
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  38020370 tgttttctacttttagcttgtgattataattgttccatacacttt 38020414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44289059 - 44288988
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | ||||||||||| |||||||||| ||||||||||| ||||||||||    
T  44289059 tgtgttctctcttcatttctctctc-gctgttttctactgttggcttgtgtttataattgtttcatacacttt 44288988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28459182 - 28459113
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||  |||||||| |||||   |||||||||||| ||||| ||||||||||||||||||||||    
T  28459182 tgtgttctctctttctttctctccctgtt---ttctacttttggtttgtgtttataattgttccatacacttt 28459113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5375338 - 5375266
Alignment:
Q  1 tgtgttctctcttcttttctctc--gctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||  |||||| ||||  ||||||| |||||  ||||||||||||||||||||||    
T  5375338 tgtgttctctcttcttttctctcttgctgttttttt--acttttgacttgtatttataattgttccatacacttt 5375266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17848703 - 17848770
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacact 71  Q
    |||||||||||||||||||||||||   |||||||||||||| | ||| | ||||||||||| ||||||||    
T  17848703 tgtgttctctcttcttttctctcgc---tgttttctactttttgtttgcgtttataattgtttcatacact 17848770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22287328 - 22287259
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacact 71  Q
    |||||||||||||| |||||||| | | |||||||||| |||| |||||  ||||||||||||||||||||    
T  22287328 tgtgttctctcttcctttctctctc-gctgttttctacgtttgacttgtttttataattgttccatacact 22287259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 13910012 - 13909961
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  13910012 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 13909961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 45279968 - 45279917
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  45279968 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 45279917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 34979554 - 34979510
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||    
T  34979554 tgttttctacttttgacttatgtttataattgttccatacacttt 34979510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 23871082 - 23871139
Alignment:
Q  4 gttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgtt 62  Q
    ||||||||||| |||||||| | | ||||||||||||||| |||||| |||||||||||    
T  23871082 gttctctcttcatttctctccc-gctgttttctacttttgccttgtgtttataattgtt 23871139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 24162190 - 24162138
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttt 74  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  24162190 tctcgccgttgttttctacttttggcttgt-att-taattgtttcatacactttt 24162138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 38414149 - 38414103
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||  |||||| |||||||| |||||||||||||    
T  38414149 gttgttttctacttttaccttgtgtttataattattccatacacttt 38414103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 23452204 - 23452153
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| |||||||||||||||| |||||| ||| |||||||||||||||||||    
T  23452204 tctcgccgttgttttctacttttagcttgt-att-taattgttccatacacttt 23452153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 27105085 - 27105136
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  27105085 tctcgccgttgttttctacttttggcttg-catt-taattgttccatacacttt 27105136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47906557 - 47906629
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47906557 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 47906629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27336934 - 27336861
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27336934 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 27336861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27339125 - 27339052
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27339125 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 27339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28207062 - 28206989
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28207062 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 28206989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 23816187 - 23816248
Alignment:
Q  12 ttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23816187 ttcttttctctcgctgttgttttctacttttgacttgtgattataattgttccatacacttt 23816248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39462806 - 39462879
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  39462806 tgtgttctctcttctttttctctcgctgttgttttctaattttggcttgtgtttataattgttccatacacttt 39462879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50307539 - 50307466
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50307539 tgtgttctctcttatttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 50307466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 25860383 - 25860325
Alignment:
Q  15 ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25860383 ttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 25860325  T

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Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12302499 - 12302428
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  12302499 tgtgttctctcttcttttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacacttt 12302428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25251268 - 25251197
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  25251268 tgtgttctctcttcctttctctctc-gttgttttctacttttggcttgtgattataattgtttcatacacttt 25251197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15823833 - 15823907
Alignment:
Q  1 tgtgttctctcttcttttctctc--gctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| ||||  | |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15823833 tgtgttctctcttcttttttctcttgttgttgttttctacttttgccttgtgattataattgttccatacacttt 15823907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 6995674 - 6995616
Alignment:
Q  15 ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  6995674 ttttctctcgctgttgttttctacttttggcttgtgtttatagttgttccatacacttt 6995616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2949226 - 2949155
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  2949226 tgtgttctctcttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 2949155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4131369 - 4131298
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| |||||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  4131369 tgtgttctctgttcttttctctctc-gttgttttctatttttggcttgtgtttataattgttccatacacttt 4131298  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14097963 - 14097892
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  14097963 tgtgttctctcttcctttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacacttt 14097892  T

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Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18307396 - 18307467
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  18307396 tgtgttctctcttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 18307467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50248564 - 50248493
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  50248564 tgtgttctctcttcctttctctctc-gttgttttcaacttttggcttgtggttataattgttccatacacttt 50248493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 18839876 - 18839946
Alignment:
Q  2 gtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| | | ||||||||| |||||||||||| ||||||||||||||||||||||    
T  18839876 gtgttctctcttcttttctctctc-gctgttttctagttttggcttgtgtttataattgttccatacacttt 18839946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 47451930 - 47451989
Alignment:
Q  14 cttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  47451930 cttttctctcgttgttgctttctacttttggcttgtgtttataattgttccatacacttt 47451989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 13215373 - 13215442
Alignment:
Q  3 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||| |||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  13215373 tgttctctcttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 13215442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38925475 - 38925406
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  38925475 tgtgttctctcttcttttctctca---ttgttttctacttttggcttgtgtttataaatgttccatacacttt 38925406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 50078782 - 50078712
Alignment:
Q  5 ttctctcttctttt-ctctcgct-gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50078782 ttctctcttctttttctctctctcgttgttttctacttttggcttgtgtttataattgttccatacacttt 50078712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 28998233 - 28998173
Alignment:
Q  10 tcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||    
T  28998233 tcttcttttctctcg---ttgttttctacttttggcttgtgtttataattgttccatacacttt 28998173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 29003949 - 29003889
Alignment:
Q  10 tcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||    
T  29003949 tcttcttttctctcg---ttgttttctacttttggcttgtgtttataattgttccatacacttt 29003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11457469 - 11457398
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||||| ||| |||||||||||| |||||    
T  11457469 tgtgttctctcttcttttctctctc-gctgttttctacttttggcttgtgtttaaaattgttccatatacttt 11457398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 2617824 - 2617880
Alignment:
Q  15 ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  2617824 ttttctctcgctgttgttttctacttttggcttgt-att-taattgttccatacacttt 2617880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 3579550 - 3579506
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  3579550 tgttttctacttttggcttgtgtttataattgttccatacacttt 3579506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17319174 - 17319245
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | | | |||||||||||||||||||| |||||| | |||||||||||||    
T  17319174 tgtgttctctcttcttttctctctc-gctattttctacttttggcttgtgtttataactattccatacacttt 17319245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31425009 - 31424942
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccataca 69  Q
    ||||||||||||||||||||||| | | ||||||||||||||| |||||| |||||||||| |||||||    
T  31425009 tgtgttctctcttcttttctctctc-gctgttttctacttttgacttgtgtttataattgtcccataca 31424942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50076666 - 50076596
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||| | ||||||||||||||||  |||||| ||||||||||||||||||||||    
T  50076666 tgtgttctctcttctttt-tctctc-gttgttttctacttttaacttgtgtttataattgttccatacacttt 50076596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 6756817 - 6756877
Alignment:
Q  3 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccat 66  Q
    ||||||||||||||| |||||||||||   ||||||||||| |||||| |||||||||||||||    
T  6756817 tgttctctcttctttcctctcgctgtt---ttctacttttgacttgtgtttataattgttccat 6756877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31490199 - 31490270
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| ||||||||| |  | |||||||||||||| |||||| ||||||||||| ||||||||||    
T  31490199 tgtgttctctcttattttctctctccct-gttttctacttttgacttgtgtttataattgtttcatacacttt 31490270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41647207 - 41647278
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||||||||  || ||||||||||||||| |||||| |||||||| || ||||||||||    
T  41647207 tgtgttctctcttcctttctctct-tgctgttttctacttttgacttgtgtttataattatttcatacacttt 41647278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10399797 - 10399746
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  10399797 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 10399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 13447242 - 13447191
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  13447242 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 13447191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 13762148 - 13762199
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  13762148 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 13762199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 15294803 - 15294752
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15294803 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 15294752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 51750351 - 51750402
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  51750351 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 51750402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 9241077 - 9241010
Alignment:
Q  3 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||  ||||||||||||||   |||||||||||| ||||  ||||||||||| ||||||||||    
T  9241077 tgttctctctttctttctctcgctgtt---ttctacttttggtttgtatttataattgtttcatacacttt 9241010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 17324388 - 17324432
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| |||||||| || ||||||||||    
T  17324388 tgttttctacttttggcttgtgtttataattttttcatacacttt 17324432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 17324618 - 17324555
Alignment:
Q  8 tctcttcttttctctcgctgttgttttctacttt-tggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||   ||||||||||||| |||||| ||||||||||||||| || ||||||    
T  17324618 tctcttcttttctctcgc---tgttttctactttctggcttatgattataattgttctattcacttt 17324555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16428941 - 16428994
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataa 57  Q
    |||||||||||||||||||||||   | |||||||||||||||| ||||| ||||||    
T  16428941 tgtgttctctcttcttttctctc---gatgttttctacttttggtttgtgtttataa 16428994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 20291768 - 20291816
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacac 70  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  20291768 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacac 20291816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 20302753 - 20302801
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacac 70  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  20302753 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacac 20302801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40134232 - 40134300
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| ||||||| |||| | |||||||||||||||||||||| ||||||||   |||||||||||||    
T  40134232 tgtgttctctattctttt-tctctc-gttgttttctacttttggcttgagattataa--cttccatacacttt 40134300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 46431674 - 46431623
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  46431674 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgcttt 46431623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 16429245 - 16429273
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgtt 29  Q
    |||||||||||||||||||||||||||||    
T  16429245 tgtgttctctcttcttttctctcgctgtt 16429273  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 25248518 - 25248474
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||| ||| || ||||||||||| ||||||||||    
T  25248518 tgttttctacttttgacttttgtttataattgtttcatacacttt 25248474  T

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Target: chr8 (Bit Score: 69; Significance: 8e-31; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15073054 - 15073126
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15073054 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 15073126  T

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Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28251559 - 28251486
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28251559 tgtgttctctcttctttttctctcgctgttgttttctacttgtggcttgtgattataattgttccatacacttt 28251486  T

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Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15068324 - 15068396
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  15068324 tgtgttcacccttcttttctctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacacttt 15068396  T

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Target: chr8; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41383005 - 41383078
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  41383005 tgtgttctctcttccttttctctcgctgttgttttctacttctggcttgtgtttataattgttccataaacttt 41383078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14808104 - 14808175
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14808104 tgtgttctctcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgtttcatacacttt 14808175  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 41385089 - 41385161
Alignment:
Q  3 tgttctctcttct-tttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttt 74  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41385089 tgttctctcttccatttctctcgctgttgttttatacttttggcttgtgtttataattgttccatacactttt 41385161  T

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Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 181822 - 181891
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  181822 tgtgttctctcttcttttctctcg---ttgttttctacttttggcttgtgtttataattgtttcatacacttt 181891  T

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Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14419182 - 14419111
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | | ||||||||||||||| |||||| ||||||||||||||||||||||    
T  14419182 tgtgttctctcttcttttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacacttt 14419111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30480495 - 30480424
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||||  ||||||||||||||||||||||    
T  30480495 tgtgttctctcttcttttctctctc-gctgttttctacttttggcttgtatttataattgttccatacacttt 30480424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35872445 - 35872377
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  35872445 tgtgttctctcttcttttctctc----ttgttttctacttttggcttgtgtttataatttttccatacacttt 35872377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33541402 - 33541331
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | || ||||||||||||||||||| ||||||||||||||||||||||    
T  33541402 tgtgttctctcttcctttctctctc-gctgatttctacttttggcttgtgtttataattgttccatacacttt 33541331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37214256 - 37214185
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||| |||||||| | |||||||||||||||||||||||| |||||||||||| |||||||||    
T  37214256 tgtgttttctcttcctttctctctc-gttgttttctacttttggcttgtgtttataattgttctatacacttt 37214185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36865880 - 36865953
Alignment:
Q  1 tgtgttctctcttcttttctctcgct-gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||| |||| |||||| || || ||||||||||||||||||||| || ||||||||||||||||||||||    
T  36865880 tgtgttctgtctttttttctttctctcgttgttttctacttttggcttttgtttataattgttccatacacttt 36865953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1225510 - 1225568
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgtt 62  Q
    |||||||||||||||||||||||||   ||||||||||||||| |||||| |||||||||||    
T  1225510 tgtgttctctcttcttttctctcgc---tgttttctacttttgacttgtgtttataattgtt 1225568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 27911447 - 27911485
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttcca 65  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  27911447 gttgttttctacttttggcttgtgtttataattgttcca 27911485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 27957866 - 27957904
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttcca 65  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  27957866 gttgttttctacttttggcttgtgtttataattgttcca 27957904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 3874361 - 3874412
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  3874361 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 3874412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 3883562 - 3883511
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  3883562 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 3883511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 4424386 - 4424437
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  4424386 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 4424437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 18811075 - 18811126
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  18811075 tctcgctgtcgttttctacttttggcttgt-att-taattgttccatacacttt 18811126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25952864 - 25952934
Alignment:
Q  1 tgtgttctctctt-cttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| |||||||||||| |||   |||||||||||| ||||| ||||||||| | ||||||||||    
T  25952864 tgtgttctctctttcttttctctcgccgtt---ttctacttttggattgtgtttataattgcttcatacacttt 25952934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 43440639 - 43440560
Alignment:
Q  211 tcaagttgtctacgactcaacccaaaccaaagtcttgtgaaagaatcaatttggtcgctcaaattaggcactcgtatcaa 290  Q
    |||||||||  || ||||||||||||||| ||| |||  ||| | | ||||||||| |||||||||||||||| ||||||    
T  43440639 tcaagttgttgactactcaacccaaaccatagttttggtaaatacttaatttggtcactcaaattaggcactcatatcaa 43440560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 43743167 - 43743088
Alignment:
Q  211 tcaagttgtctacgactcaacccaaaccaaagtcttgtgaaagaatcaatttggtcgctcaaattaggcactcgtatcaa 290  Q
    |||||||||  || ||||||||||||||| ||| |||  ||| | | ||||||||| |||||||||||||||| ||||||    
T  43743167 tcaagttgttgactactcaacccaaaccatagttttggtaaatacttaatttggtcactcaaattaggcactcatatcaa 43743088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 5372148 - 5372107
Alignment:
Q  28 ttgttttctacttttggcttgtgattataattgttccataca 69  Q
    ||||||||||||||||||||| | |||||| |||||||||||    
T  5372148 ttgttttctacttttggcttgagtttataactgttccataca 5372107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 18813249 - 18813300
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| || |||||||||||||||||||| ||| |||||||||||||||||||    
T  18813249 tctcgccgtcgttttctacttttggcttgt-att-taattgttccatacacttt 18813300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 22684620 - 22684569
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  22684620 tctcgccgttgttttctacttttggcttgt-att-taattgttccataaacttt 22684569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 27827353 - 27827404
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  27827353 tctcgccgttgttttctacttttgacttgt-att-taattgttccatacacttt 27827404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 43530491 - 43530534
Alignment:
Q  28 ttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  43530491 ttgttttctacttttggcttgt-att-taattgttccatacacttt 43530534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 8e-31; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27306224 - 27306152
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27306224 tgtgttctctcttcttttctctcgctgttgttttcttcttttggcttgtgattataattgttccatacacttt 27306152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13099466 - 13099393
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13099466 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 13099393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26804807 - 26804879
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  26804807 tgtgttctctcttcttttctctcgatgttgttttctacttttgacttgtgtttataattgttccatacacttt 26804879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21592135 - 21592063
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttt 74  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||||||||||    
T  21592135 tgtgttctctcttcttttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacactttt 21592063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 21680329 - 21680396
Alignment:
Q  3 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||    
T  21680329 tgttctctcttcttttctctcg---ttgttttctacttttggcttgtgtttataattgttccatacacttt 21680396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31435038 - 31434969
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  31435038 tgtgttctctcttcttttctctcg---ttgttttctacttttggcttgtgtttataattgttccttacacttt 31434969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 443893 - 443966
Alignment:
Q  1 tgtgttctctcttcttttctctcgct-gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||    
T  443893 tgtgttctctcttcctttctctctctcgctgttttctacttttggcttgtgattataattgttcaatacacttt 443966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 37412105 - 37412043
Alignment:
Q  8 tctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||||    
T  37412105 tctcttcttttctctcg---ttgttttctagttttggcttgtgattataattgttccatacacttt 37412043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21678361 - 21678430
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||| |||||||   |||||||||||||||||| ||||||||||||| ||||||||    
T  21678361 tgtgttctctcttcttttctcccgctgtt---ttctacttttggcttgtgtttataattgttccttacacttt 21678430  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9681117 - 9681188
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | | |||||||||||||||||||| ||||||||||||||||||||||    
T  9681117 tgtgttctctcttcctttctctctc-gatcttttctacttttggcttgtgtttataattgttccatacacttt 9681188  T

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Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21990447 - 21990518
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | ||||| |||||||||||||||| ||||||||||||||||||||||    
T  21990447 tgtgttctctcttcctttctctctc-gctgtttgctacttttggcttgtgtttataattgttccatacacttt 21990518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 11355580 - 11355627
Alignment:
Q  26 tgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11355580 tgttgttttctacttttggcttgtgtttataattgttccatacacttt 11355627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44724876 - 44724946
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataat-tgttccatacacttt 73  Q
    |||||||||||||| |||||||||   ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  44724876 tgtgttctctcttcatttctctcg---ttgttttctacttttggcttgtgtttataatatgttccatacacttt 44724946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9679356 - 9679427
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||| |||||||| | | ||||||||||||||| |||||| ||||||||||||||||||||||    
T  9679356 tgtgttatctcttcctttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacacttt 9679427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22251577 - 22251506
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||| ||||| ||||||||  || |||||||||||||||||||||| ||||||||||| ||||||||||    
T  22251577 tgtgttctatcttcctttctctct-tgctgttttctacttttggcttgtgtttataattgtttcatacacttt 22251506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 42330966 - 42330922
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  42330966 tgttttctacttttggcttgtgtttataattgttccatacacttt 42330922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4295926 - 4295857
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||     |||||||||||||||||||| |||| ||||||| |||||||||    
T  4295926 tgtgttctctcttcttttctctcgc---cattttctacttttggcttgtgtttattattgttctatacacttt 4295857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39145978 - 39145918
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgtt 62  Q
    |||||||||||||| |||||||| | |||||||||||||||||| ||||| |||||||||||    
T  39145978 tgtgttctctcttcctttctctctc-gttgttttctacttttggtttgtgtttataattgtt 39145918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 8645418 - 8645367
Alignment:
Q  239 aaagtcttgtgaaagaatcaatttggtcgctcaaattaggcactcgtatcaa 290  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||||||||||    
T  8645418 aaagtcttggtaaataatcaatttggtcactcaaattaggcactcgtatcaa 8645367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20626335 - 20626382
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggctt 47  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  20626335 tgtgttctctcatctttttctctcgctgttgttttctacttttggctt 20626382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20630226 - 20630273
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggctt 47  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  20630226 tgtgttctctcatctttttctctcgctgttgttttctacttttggctt 20630273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20642645 - 20642692
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggctt 47  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  20642645 tgtgttctctcatctttttctctcgctgttgttttctacttttggctt 20642692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 42223459 - 42223524
Alignment:
Q  5 ttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||    |||||||||||||||| |||||| |||||||||||  |||||||||    
T  42223459 ttctctcttcttttctctca---ttgttttctacttttgccttgtgtttataattgttttatacacttt 42223524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 3036046 - 3036097
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  3036046 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 3036097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 11759449 - 11759500
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  11759449 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 11759500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 18345863 - 18345914
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  18345863 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 18345914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 20297684 - 20297735
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  20297684 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 20297735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 20299782 - 20299833
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  20299782 tctcgcagttgttttctacttttggcttgt-att-taattgttccatacacttt 20299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 38394308 - 38394359
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  38394308 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 38394359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 40836710 - 40836659
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  40836710 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 40836659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22394020 - 22394087
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||  |||||||||   ||||||||||||||||| ||||||||||||   |||||||||||||    
T  22394020 tgtgttctctctttctttctctcg---ttgttttctacttttggtttgtgattataa--cttccatacacttt 22394087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 24465832 - 24465899
Alignment:
Q  2 gtgttctctctt-cttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||| ||||||||||||||||   |||||||||||| ||||||||||||   |||||||||||||    
T  24465832 gtgttctctctttcttttctctcgctgtt---ttctacttttggtttgtgattataa--cttccatacacttt 24465899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 7469982 - 7469938
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  7469982 gttgttttctacttttggcttgt-att-taattgttccatacacttt 7469938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 7471940 - 7471896
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  7471940 gttgttttctacttttggcttgt-att-taattgttccatacacttt 7471896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 44886 - 44937
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| |||||||||||||||| |||||| ||| |||||||||||||||||||    
T  44886 tctcgccgttgttttctactttttgcttgt-att-taattgttccatacacttt 44937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20137101 - 20137061
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttgg 44  Q
    |||||||||||||||||||||||||   ||||||||||||||||    
T  20137101 tgtgttctctcttcttttctctcgc---tgttttctacttttgg 20137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 48457975 - 48458026
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  48457975 tctcgccgttgttttctacttttgacttgt-att-taattgttccatacacttt 48458026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 1850308 - 1850354
Alignment:
Q  25 ctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  1850308 ctgttgttttctacttttggcttgt-att-taattgtttcatacacttt 1850354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 8642075 - 8642111
Alignment:
Q  254 aatcaatttggtcgctcaaattaggcactcgtatcaa 290  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  8642075 aatcaatttggtcactcaaattaagcactcgtatcaa 8642111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 26295766 - 26295798
Alignment:
Q  27 gttgttttctacttttggcttgtgattataatt 59  Q
    |||||||||||||||||||||||| ||||||||    
T  26295766 gttgttttctacttttggcttgtgtttataatt 26295798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11465 - 11392
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11465 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 11392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40637415 - 40637488
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40637415 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 40637488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24879331 - 24879404
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24879331 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 24879404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24889137 - 24889210
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24889137 tgtgttatctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 24889210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 52942480 - 52942407
Alignment:
Q  1 tgtgttctctcttcttttc-tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  52942480 tgtgttctctcttcttttcctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 52942407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17662237 - 17662166
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17662237 tgtgttctctcttctttt-tctcgctgttgttttctacttttggcatgtgattataattgttccatacacttt 17662166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24880793 - 24880866
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  24880793 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccgtacacttt 24880866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22800854 - 22800781
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  22800854 tgtgttctctcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatatacttt 22800781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22802726 - 22802653
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  22802726 tgtgttctatcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatacacttt 22802653  T

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Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2891633 - 2891704
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  2891633 tgtgttctctcttcctttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacacttt 2891704  T

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Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33415480 - 33415411
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||| |||||||||||    
T  33415480 tgtgttctctcttcttttctctcgctgtt---ttctacttttggcttgtgtttataattgtcccatacacttt 33415411  T

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Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38928169 - 38928100
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||   |||||||||||||||||||||||||||||| |||||||||||||||    
T  38928169 tgtgttctctcttcttttatctcg---ttgttttctacttttggcttgtgattataactgttccatacacttt 38928100  T

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Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6133178 - 6133249
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  6133178 tgtgttctctcttcttttctctctc-gttgttttctacttttgacttgtgtttataattgtttcatacacttt 6133249  T

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Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36921485 - 36921414
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||| ||||||||||| ||||||||||    
T  36921485 tgtgttctctcttcttttctctct-tgctgttttctacttttggcttgtgtttataattgtttcatacacttt 36921414  T

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Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24446646 - 24446578
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  24446646 tgtgttctctcttcttttctctc----ttgttttctacttttggcttgtgtttataatttttccatacacttt 24446578  T

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Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16453651 - 16453720
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| |||||   ||||||||||||||||||||||||| |||| ||||||||||    
T  16453651 tgtgttctctcttcttttctctcactgtt---ttctacttttggcttgtgattataactgtttcatacacttt 16453720  T

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Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47563102 - 47563171
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||||||||||||||   ||||||||||||||| || ||||||||||||||||||||||    
T  47563102 tgtgttctctcttcctttctctcgctgtt---ttctacttttggcttatgtttataattgttccatacacttt 47563171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 48486660 - 48486733
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  48486660 tgtgttttctcttccttttctcttgatgttgttttctacttttggcttgtgtttataattgttccattcacttt 48486733  T

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Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13547495 - 13547566
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | | |||||||||||||||||||| ||||||||||||||||||||||    
T  13547495 tgtgttctctcttcctttctctctc-gatcttttctacttttggcttgtgtttataattgttccatacacttt 13547566  T

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Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36919576 - 36919505
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | ||||||||||||||| |||||| ||||||||||||||||||||||    
T  36919576 tgtgttctctcttcctttctctctc-gctgttttctacttttgacttgtgtttataattgttccatacacttt 36919505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40091407 - 40091336
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||  || | |||||||||||||||||||| |||||||| |||||||||||||    
T  40091407 tgtgttctctcttcttttctctct-tgctattttctacttttggcttgtgtttataattattccatacacttt 40091336  T

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Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4215647 - 4215715
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| |||||||||||||| |||   |||||||||||||||||||||||||||||| ||||||||||    
T  4215647 tgtgttctct-ttcttttctctcgcagtt---ttctacttttggcttgtgattataattgtttcatacacttt 4215715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36380691 - 36380760
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||   ||  |||||||||||||||||||||| ||||||||||| ||||||||||    
T  36380691 tgtgttctctcttcttttctc---cttctgttttctacttttggcttgtgtttataattgtttcatacacttt 36380760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 49088922 - 49088968
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  49088922 gttgttttctacttttggcttgtgtttataattgttccatacacttt 49088968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 14787396 - 14787350
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14787396 gttgttttctacttttggcttgtgtttataattgtttcatacacttt 14787350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 14789395 - 14789349
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14789395 gttgttttctacttttggcttgtgtttataattgtttcatacacttt 14789349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36378634 - 36378703
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||   ||| |||||||||||||| | ||||| ||||||||||| ||||||||||    
T  36378634 tgtgttctctcttcttttctc---ctgctgttttctacttttcgtttgtgtttataattgtttcatacacttt 36378703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27499383 - 27499460
Alignment:
Q  1 tgtgttctctcttcttttctctcgct-----gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| ||     ||||||||||||||||| |||||| |||||||||||||||| |||||    
T  27499383 tgtgttctctcttcctttctctctctctctcgttgttttctacttttgacttgtgtttataattgttccataaacttt 27499460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 37313044 - 37313000
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||    
T  37313044 tgttttctacttttggcttatgattataattgtttcatacacttt 37313000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 2484840 - 2484789
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  2484840 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 2484789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 5635443 - 5635392
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  5635443 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 5635392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 11437728 - 11437779
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  11437728 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 11437779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 37089339 - 37089288
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  37089339 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 37089288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 51015611 - 51015662
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  51015611 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 51015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 5101284 - 5101328
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||    
T  5101284 tgttttctccctttggcttgtgtttataattgttccatacacttt 5101328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 47275092 - 47275135
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacactt 72  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||    
T  47275092 tgttttctacttttggcttgtgtttataattattctatacactt 47275135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5664576 - 5664647
Alignment:
Q  1 tgtgttctctctt-cttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| ||||||||||| |  |||||||||||||||| |||| |||||||   |||||||||||||    
T  5664576 tgtgttctctctttcttttctctcgttaatgttttctacttttggtttgtcattataa--cttccatacacttt 5664647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 9148608 - 9148652
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  9148608 gttgttttctacttttggcttgt-att-taattgttccatacacttt 9148652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 11435328 - 11435371
Alignment:
Q  28 ttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  11435328 ttgttttctacttttggcttgt-att-taattgttccatacacttt 11435371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 14633684 - 14633731
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccataca 69  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  14633684 tctcgccgttgttttctacttttggcttgt-att-taattgttccataca 14633731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 22044358 - 22044307
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  22044358 tctcgccgttgttttctacttttggcttgt-att-taattgtttcatacacttt 22044307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22295506 - 22295565
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttcc 64  Q
    |||||||||||||| ||||||||||   |||||||||| ||| ||||||| |||||||||||||    
T  22295506 tgtgttctctcttcctttctctcgc---tgttttctaccttt-gcttgtgtttataattgttcc 22295565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25357984 - 25358042
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttcc 64  Q
    |||||||||||||| ||||||||   |||||||||||||||| ||||||| |||||||||||||    
T  25357984 tgtgttctctcttc-tttctctc---gttgttttctactttt-gcttgtgtttataattgttcc 25358042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 38409570 - 38409617
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccataca 69  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  38409570 tctcgccgttgttttctacttttggcttgt-att-taattgttccataca 38409617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 47210755 - 47210712
Alignment:
Q  28 ttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  47210755 ttgttttctacttttggcttgt-att-taattgttccatacacttt 47210712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 619440 - 619387
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataa 57  Q
    ||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  619440 tgtgttctctctt-tcttctct-gctgttgttttctactttt-gcttgtgattataa 619387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12395837 - 12395766
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||||| || | ||||| ||||||||||||| |||| |||||||| ||| |||| ||||    
T  12395837 tgtgttctctcttcctttctgtctc-gttgtcttctacttttggcatgtgtttataatttttcgatactcttt 12395766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12400799 - 12400728
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||||| || | ||||| ||||||||||||| |||| |||||||| ||| |||| ||||    
T  12400799 tgtgttctctcttcctttctgtctc-gttgtcttctacttttggcatgtgtttataatttttcgatactcttt 12400728  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 16455594 - 16455638
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||| |||| |||| ||||||||| |||||||||||||||    
T  16455594 tgttttctagttttagcttatgattataactgttccatacacttt 16455638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4308271 - 4308198
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4308271 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 4308198  T

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Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 53917654 - 53917582
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  53917654 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttt 53917582  T

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Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 53915486 - 53915415
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactt 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  53915486 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactt 53915415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18096890 - 18096817
Alignment:
Q  1 tgtgttctctcttcttt-tctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18096890 tgtgttctctcttctttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 18096817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32219352 - 32219425
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32219352 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 32219425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27101171 - 27101098
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27101171 tgtgttctctcttccttttctcttgctgttgttttctactttttgcttgtgattataattgttccatacacttt 27101098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36012094 - 36012167
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  36012094 tgtgttctctcttctttttctctcgctgttgttttctacttttcgcttgtgtttataattgttccatacacttt 36012167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43423453 - 43423384
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||    
T  43423453 tgtgttctctcttcttttctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacacttt 43423384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18099160 - 18099087
Alignment:
Q  1 tgtgttctctcttcttt-tctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  18099160 tgtgttctcttttctttctctctcgctgttgttttctacttttggcttgtgtttacaattgttccatacacttt 18099087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18162930 - 18163003
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  18162930 tgtgttctctcttctttttctctcgctgcagttttctacttttggcttgtgtttataattgttccatacacttt 18163003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 9604585 - 9604522
Alignment:
Q  10 tcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  9604585 tcttcttttctctcgctgttgttttctatttttggcctgtgattataattgtttcatacacttt 9604522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 880441 - 880372
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||   |||||||||||| |||||||||||| |||||||||||||||    
T  880441 tgtgttctctcttcttttctctcgctgtt---ttctacttttggtttgtgattataactgttccatacacttt 880372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1313676 - 1313745
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||||| ||||||||||||||||||||||    
T  1313676 tgtgttctctcttcttttctctcg---ttgttttctacttttgacttgtgtttataattgttccatacacttt 1313745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24979975 - 24980049
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgtttt-ctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  24979975 tgtgttctctcttctttttctctcgttgttgtttttctacttttggcttgtgtttataattgttccatacacttt 24980049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43421405 - 43421336
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||   || ||||||||||||||| ||||||||||||||||||||||    
T  43421405 tgtgttctctcttcttttctctcgctgtt---ttatacttttggcttgtgtttataattgttccatacacttt 43421336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25688150 - 25688077
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||||    
T  25688150 tgtgttctctcttccttttctctcgttgatgttttctacttttggcttgtgtttacaattgttccatacacttt 25688077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12267965 - 12267895
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  12267965 tgtgttctctcttcttt-ctctctc-gttgttttctacttttggcttgtgtttataattgttccatacacttt 12267895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28181271 - 28181342
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||  | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  28181271 tgtgttctctcttcttttctctgtc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 28181342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32264028 - 32263957
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  32264028 tgtgttctctcttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 32263957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47148885 - 47148814
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  47148885 tgtgttctctcttcctttctctctc-gttgttttctacttttgacttgtgtttataattgttccatacacttt 47148814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 27635636 - 27635574
Alignment:
Q  8 tctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||    
T  27635636 tctcttcttttctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacacttt 27635574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 48361649 - 48361587
Alignment:
Q  8 tctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||    
T  48361649 tctcttcttttctctcg---ttgttttctacttttgacttgtgattataattgttccatacacttt 48361587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 880230 - 880161
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||||||||||| |||| ||||||||||    
T  880230 tgtgttctctcttcttttctctcg---ttgttttctacttttggtttgtgattataactgtttcatacacttt 880161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 5899966 - 5900015
Alignment:
Q  24 gctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5899966 gctgttgttttctacttttggcttgtgattataactgttccatacacttt 5900015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43228558 - 43228630
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  43228558 tgtgttctctcttcctttactctcgctgttgttttctaattttggcttgt-attttaattgttccatacacttt 43228630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3314952 - 3315023
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||| ||||||||||| ||||||||||||||||||||||    
T  3314952 tgtgttctctcttcctttctctctc-gctgttttctacgtttggcttgtgtttataattgttccatacacttt 3315023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 15781150 - 15781217
Alignment:
Q  5 ttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||| |||||| |||||||||||||||    
T  15781150 ttctctcttcttttctctctc-gttgttttctacttttgacttgtgtttataactgttccatacacttt 15781217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43226350 - 43226420
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactt 72  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  43226350 tgtgttctctcttccttttctctcgctgttg-tttctacttttggcttgt-attttaattgttccatacactt 43226420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 5886495 - 5886542
Alignment:
Q  26 tgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  5886495 tgttgttttctacttttggcttgtgattataactgttccatacacttt 5886542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 45883219 - 45883281
Alignment:
Q  8 tctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||| ||||||   |||||||| ||||||||||||||||||||||||||||||||    
T  45883219 tctcttcttttctcttgctgtt---ttctacttctggcttgtgattataattgttccatacacttt 45883281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 51674756 - 51674690
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatac 68  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||||| ||||| |||||||||||    
T  51674756 tgtgttctctcttcttttctctctc-gctgttttctacttttggcttgtgtttatatttgttccatac 51674690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 51943649 - 51943711
Alignment:
Q  8 tctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||   |||||||||||||||||| |||||||||||||| |||||||    
T  51943649 tctcttcttttctctcgctgtt---ttctacttttggcttgtgtttataattgttccaaacacttt 51943711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6484627 - 6484696
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| || ||||||||||||   ||||||||||| |||||| ||||||||||||||||||||||    
T  6484627 tgtgttctctcttattctctctcgctgtt---ttctacttttgacttgtgtttataattgttccatacacttt 6484696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 54691562 - 54691496
Alignment:
Q  3 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccataca 69  Q
    |||| ||||||| |||||||| | |||||||||||||||||||||||| ||||||||||| ||||||    
T  54691562 tgttttctcttcctttctctctcggttgttttctacttttggcttgtgtttataattgtttcataca 54691496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39715732 - 39715804
Alignment:
Q  1 tgtgttctctctt-cttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| | |||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  39715732 tgtgttctctctttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 39715804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1626673 - 1626602
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | ||||||||  ||||||| |||||| ||||||||||||||||||||||    
T  1626673 tgtgttctctcttcctttctctctc-gttgtttttcacttttgacttgtgtttataattgttccatacacttt 1626602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3307027 - 3307098
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||  | | |||||||||||||||||||||| ||||||||||| ||||||||||    
T  3307027 tgtgttctctcttcctttctctttc-gctgttttctacttttggcttgtgtttataattgtttcatacacttt 3307098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 53468443 - 53468372
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | | ||||||||||||| |||||| ||||||||||||||||||||||    
T  53468443 tgtgttctctcttcctttctctctc-gctattttctacttttgacttgtgtttataattgttccatacacttt 53468372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 47701638 - 47701593
Alignment:
Q  28 ttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||    
T  47701638 ttgttttctacttttggcttgtgttcataattgttccatacacttt 47701593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4666781 - 4666852
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | | |||||| ||||||||| ||||  ||||||||||| ||||||||||    
T  4666781 tgtgttctctcttcttttctctctc-gctgttttatacttttggtttgtttttataattgtttcatacacttt 4666852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5926755 - 5926685
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| ||| |||||||| | ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  5926755 tgtgttctcttttcctttctctctc-gttgttttctacttttg-cttgtgtttataattgttccttacacttt 5926685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6232067 - 6232137
Alignment:
Q  1 tgtgttctctcttcttt-tctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||| |||||||||||| |||   | ||||| |||||| ||||||||||||||||||||||    
T  6232067 tgtgttctctcttctttctctctcgctgtttttt---atttttgacttgtgtttataattgttccatacacttt 6232137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8183124 - 8183058
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacac 70  Q
    ||||||||||||| |||||||| || |||   ||||||||||| |||||| |||||||||||||||||||    
T  8183124 tgtgttctctctttttttctcttgcagtt---ttctacttttgacttgtgtttataattgttccatacac 8183058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30006108 - 30006151
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttg 43  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  30006108 tgtgttctctcttctttttctctcgctgttgttttctacttttg 30006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 53591456 - 53591517
Alignment:
Q  5 ttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccataca 69  Q
    |||||||||||||||||||||   |||||||| |||||| ||| || ||||||||||||||||||    
T  53591456 ttctctcttcttttctctcgc---tgttttctgcttttgacttatgtttataattgttccataca 53591517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 1321771 - 1321822
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  1321771 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 1321822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 3859802 - 3859854
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  3859802 tctcgccgttgttttctacttttggcttgt-attttaattgtttcatacacttt 3859854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10955992 - 10955941
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  10955992 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 10955941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 11168393 - 11168444
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  11168393 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 11168444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 25533717 - 25533768
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  25533717 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 25533768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42990571 - 42990620
Alignment:
Q  1 tgtgttctctcttcttttct-ctcgctgttgttttctacttttggcttgt 49  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  42990571 tgtgttctctctccttttcttctcgccgttgttttctacttttggcttgt 42990620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42992537 - 42992586
Alignment:
Q  1 tgtgttctctcttcttttct-ctcgctgttgttttctacttttggcttgt 49  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  42992537 tgtgttctctctccttttcttctcgccgttgttttctacttttggcttgt 42992586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 51726972 - 51726921
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  51726972 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 51726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 5191951 - 5191994
Alignment:
Q  28 ttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  5191951 ttgttttctacttttggcttgt-att-taattgttccatacacttt 5191994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10084354 - 10084303
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  10084354 tctcgccgttgttttctacttttggcttgt-att-taattgtcccatacacttt 10084303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10191277 - 10191226
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  10191277 tctcgccgttgttttctacttttggcttgt-att-taattgtcccatacacttt 10191226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10958288 - 10958237
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  10958288 tctcgccgttgttttctacttttggcttgt-att-taattgttctatacacttt 10958237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 38890332 - 38890383
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  38890332 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgcttt 38890383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41849326 - 41849374
Alignment:
Q  1 tgtgttctctcttcttttctctcgct-gttgttttctacttttggcttgt 49  Q
    |||||||||||||||||| |||| || |||||||||||||||||||||||    
T  41849326 tgtgttctctcttctttt-tctctctcgttgttttctacttttggcttgt 41849374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 31151612 - 31151640
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgtt 29  Q
    |||||||||||||||||||||||||||||    
T  31151612 tgtgttctctcttcttttctctcgctgtt 31151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18509310 - 18509238
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  18509310 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttt 18509238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2818327 - 2818254
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2818327 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacacttt 2818254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18511204 - 18511132
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  18511204 tgtgttctctcttcttttctctcgctgttgttttctactttttgcttgtgtttataattgtttcatacacttt 18511132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6747591 - 6747664
Alignment:
Q  1 tgtgttctct-cttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  6747591 tgtgttctcttcttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacacttt 6747664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39854770 - 39854844
Alignment:
Q  1 tgtgttctctcttc--ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  39854770 tgtgttctctcttcctttttctctcgctgttgttttttacttttggcttgtgtttataattgttccatacacttt 39854844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 6745367 - 6745428
Alignment:
Q  12 ttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  6745367 ttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacacttt 6745428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36402320 - 36402247
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  36402320 tgtgttctctcttctttttctctcgctgttgttttctacttttagcttgtgtttataattgttctatacacttt 36402247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 17073187 - 17073245
Alignment:
Q  15 ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  17073187 ttttctctcgctgttgttttctacttttgacttgtgtttataattgttccatacacttt 17073245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 41585725 - 41585656
Alignment:
Q  3 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| |||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  41585725 tgttctatcttcttttctctctc-gttgttttctacttttggcttgtgtttataattgttccatacacttt 41585656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 12555898 - 12555834
Alignment:
Q  8 tctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  12555898 tctcttcttttctctctc-gttgttttctacttttggcttgtgattataattgtttcatacacttt 12555834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6756779 - 6756850
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||||| ||||||||||    
T  6756779 tgtgttctctcttcttttctctctc-gctgttttctacttttggcttgtgtttataattgtttcatacacttt 6756850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31465977 - 31465910
Alignment:
Q  5 ttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  31465977 ttctctcttcttttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 31465910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20043277 - 20043347
Alignment:
Q  1 tgtgttctctctt-cttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| ||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||    
T  20043277 tgtgttctctctttcttttctctcgctgtt---ttctacttttggcttgtgtttataattgttccatacacttt 20043347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 26098278 - 26098207
Alignment:
Q  3 tgttctctcttcttttctctcgct-gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||| |||||||| || | |||||||||||||||||||||| ||||||||||||||||||||||    
T  26098278 tgttctctcttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacacttt 26098207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 16776461 - 16776518
Alignment:
Q  15 ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  16776461 ttttctctcgctgttgttttctacttttggcttgt-attataattgtttcatacacttt 16776518  T

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Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20505835 - 20505766
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| ||||||||||   |||||||||| |||||||||||| ||||||||||||||||||||||    
T  20505835 tgtgttctctcttattttctctcg---ttgttttctagttttggcttgtgtttataattgttccatacacttt 20505766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17818484 - 17818411
Alignment:
Q  1 tgtgttctctcttcttttctctcgct-gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||| ||| |||||||| || | |||||||||||||||||||||| ||||||||||||||||||||||    
T  17818484 tgtgttctcttttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacacttt 17818411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25904390 - 25904461
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||||||||| ||||| ||||||||||||||||||||||    
T  25904390 tgtgttctctcttcctttctctctc-gctgttttctacttttggtttgtgtttataattgttccatacacttt 25904461  T

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Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2954703 - 2954773
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgat-tataattgttccatacacttt 73  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||| |  ||||||||||||||||||||    
T  2954703 tgtgttctctcttcttttctctcgc---tgttttctacttttggcttgtgttacataattgttccatacacttt 2954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 18596942 - 18597003
Alignment:
Q  9 ctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||   ||||||||||| |||||| ||||||||||||||||||||||    
T  18596942 ctcttcttttctctcgctgtt---ttctacttttgacttgtgtttataattgttccatacacttt 18597003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 36208885 - 36208931
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  36208885 gttgttttctacttttggcttgtgattataattgttctatacacttt 36208931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2724180 - 2724251
Alignment:
Q  1 tgtgttctctcttc--ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||  |||||| ||||||||   |||||||||||||||||| ||||||||||||||||||||||    
T  2724180 tgtgttctctcttcctttttctttcgctgtt---ttctacttttggcttgtgtttataattgttccatacacttt 2724251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1189599 - 1189532
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccataca 69  Q
    |||||||||||||| |||||||| | |  ||||||||||||||||||||| ||||||||||||||||||    
T  1189599 tgtgttctctcttcctttctctctc-gcagttttctacttttggcttgtgtttataattgttccataca 1189532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16092191 - 16092120
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||| | ||| |||||||||||| |||||    
T  16092191 tgtgttctctcttcttttctctctc-gctgttttctacttttggcttgcgtttacaattgttccatatacttt 16092120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26098018 - 26098089
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| ||||| || | | |||||||||||||||||| ||| ||||||||||||||||||||||    
T  26098018 tgtgttctctcttcctttctatctc-gctgttttctacttttggctagtgtttataattgttccatacacttt 26098089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 40221843 - 40221887
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  40221843 tgttttctacttttggcttgtgtttataattgttccatacacttt 40221887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 20045286 - 20045344
Alignment:
Q  12 ttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||   ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  20045286 ttcttttctctcg---ttgttttttacttttggcttgtgtttataattgttccatacacttt 20045344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 658348 - 658279
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||||||   ||||||||||||||| || |||| |||||||| ||||||||    
T  658348 tgtgttctctcttcttttctcttgctgtt---ttctacttttggcttatgtttattattgttccgtacacttt 658279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 21948348 - 21948390
Alignment:
Q  31 ttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  21948348 ttttctacttttggcttgtgtttataattgttccatacacttt 21948390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10474315 - 10474244
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |  ||||||||||| ||||||| ||||||||||||||||||||||    
T  10474315 tgtgttctctcttcctttctctctc-gctaatttctacttttcgcttgtgtttataattgttccatacacttt 10474244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15143754 - 15143817
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttcca 65  Q
    |||||||||||| ||||||||||||| || |||||||||||| | ||||| ||||||||||||||    
T  15143754 tgtgttctctctacttttctctcgctatt-ttttctactttttgtttgtgtttataattgttcca 15143817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24127143 - 24127214
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||  |||||||| | ||||||||||||||||| ||| || ||||||||||| ||||||||||    
T  24127143 tgtgttctctctttctttctctctc-gttgttttctacttttgacttatgtttataattgtttcatacacttt 24127214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 21289071 - 21289117
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||    
T  21289071 gttgttttctacttttggcttgtgtttattattcttccatacacttt 21289117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10529065 - 10529014
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  10529065 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 10529014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 25804336 - 25804387
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  25804336 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 25804387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 25921440 - 25921389
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  25921440 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 25921389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 34477020 - 34476969
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  34477020 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 34476969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 37705771 - 37705703
Alignment:
Q  4 gttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||| |||||||| | | |||||||||||||||||||||| || ||||| ||||||| |||||    
T  37705771 gttctctcttcctttctctctc-gctgttttctacttttggcttgtgtttttaattattccatatacttt 37705703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 38882400 - 38882451
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  38882400 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 38882451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 39397970 - 39397926
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||    
T  39397970 tgttttctacttttggcttgagtttataattgtttcatacacttt 39397926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 4236947 - 4236991
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  4236947 gttgttttctacttttggcttgt-att-taattgttccatacacttt 4236991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 696176 - 696232
Alignment:
Q  16 tttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||| || |||||||||||||||||| | ||||| |||||| |||||||||||||||    
T  696176 tttctttctctgttgttttctactttt-gtttgtgtttataactgttccatacacttt 696232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 2175213 - 2175264
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  2175213 tctcgccgttgttttctacttttggcttgt-att-taattgtttcatacacttt 2175264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 3373104 - 3373053
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  3373104 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgcttt 3373053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 10750011 - 10750062
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  10750011 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgcttt 10750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 10757487 - 10757538
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  10757487 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgcttt 10757538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 34479385 - 34479334
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  34479385 tctcgccgttgttttctacttttggcttg-catt-taattgttccatacacttt 34479334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 34530679 - 34530635
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||| |||||||||| |||||| ||||||||||||||||| ||||    
T  34530679 tgttgtctacttttgacttgtgtttataattgttccatacgcttt 34530635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 79481 - 79554
Alignment:
Q  1 tgtgttctctcttctttt-ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79481 tgtgttctctcttctttttctcttgctgttgttttctacttttggcttgtgattataattgttccatacacttt 79554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11983021 - 11982947
Alignment:
Q  1 tgtgttctctcttctttt--ctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11983021 tgtgttctctcttcttttttctctcgctgttgttttctacttttggcttgtgattgtaattgttccatacacttt 11982947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9020248 - 9020322
Alignment:
Q  1 tgtgttctctcttc--ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  9020248 tgtgttctctcttcccttttctctcgctgttgttttctacttttggcttgtatttataattgttccatacacttt 9020322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3233717 - 3233644
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||    
T  3233717 tgtgttctctcttccttttctctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcacttt 3233644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15530155 - 15530084
Alignment:
Q  1 tgtgttctctcttcttttctctc-gctgttgttttctacttttggcttgtgattataattgttccatacactt 72  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15530155 tgtgttctctcttctttt-tctctgctgttgttttctacttttggcttgtatttataattgttccatacactt 15530084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3629857 - 3629787
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctactttt-ggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||   ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3629857 tgtgttctctcttcttttctctcg---ttgttttctactttttggcttgtgtttataattgttccatacacttt 3629787  T

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Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 33881465 - 33881548
Alignment:
Q  200 ttgtgtctgcttcaagttgtctacgactcaacccaaaccaaagtcttgtgaaagaatcaatttggtcgctcaaattaggcactc 283  Q
    ||||||||||||||||||||| ||| |||||| |||| | ||||||||  ||||||||||||||||| |||||||||| |||||    
T  33881465 ttgtgtctgcttcaagttgtcaacggctcaactcaaatcgaagtcttggtaaagaatcaatttggtcactcaaattagacactc 33881548  T

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Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 1069708 - 1069639
Alignment:
Q  3 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||| | | |||||||||||||| ||||||| ||||||||||||||||||||||    
T  1069708 tgttctctcttcttttctctctc-gctgttttctactttttgcttgtgtttataattgttccatacacttt 1069639  T

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Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24338440 - 24338371
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| |||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  24338440 tgtgttatctcttcttttctctcg---ttgttttctacttttggtttgtgtttataattgttccatacacttt 24338371  T

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Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 3394695 - 3394760
Alignment:
Q  7 ctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||| |||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  3394695 ctctcttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 3394760  T

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Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15346668 - 15346737
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||  |||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  15346668 tgtgttctctctttctttctct---tgttgttttctacttttggcttgtgtttataattgttccatatacttt 15346737  T

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Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 3631904 - 3631860
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  3631904 tgttttctacttttggcttgtgtttataattgttccatacacttt 3631860  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 15367380 - 15367422
Alignment:
Q  31 ttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  15367380 ttttctacttttggcttgtgtttataattgttccatacacttt 15367422  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 26065330 - 26065379
Alignment:
Q  24 gctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  26065330 gctgttgttttctacttttggcatgtgattataactgttccatacgcttt 26065379  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 26085299 - 26085348
Alignment:
Q  24 gctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  26085299 gctgttgttttctacttttggcatgtgattataactgttccatacgcttt 26085348  T

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Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 25480227 - 25480271
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||    
T  25480227 tgttttctacttttgacttgtgattataattgtttcatacacttt 25480271  T

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Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30728816 - 30728745
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||| |||||||| | | ||||||||||||||| |||||  ||||||||||||||||||||||    
T  30728816 tgtgttatctcttcctttctctctc-gctgttttctacttttgacttgtatttataattgttccatacacttt 30728745  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 14507143 - 14507092
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  14507143 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 14507092  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32280319 - 32280379
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgtt 62  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||||||  |||||||||||    
T  32280319 tgtgttctctcttcctttctctca-tgttattttctacttttggcttgtatttataattgtt 32280379  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12186063 - 12186000
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccata 67  Q
    |||||||||||||  ||||||||||||||   ||||||||||  |||||| ||||||||||||||||    
T  12186063 tgtgttctctctttctttctctcgctgtt---ttctactttttccttgtgtttataattgttccata 12186000  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14466646 - 14466701
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataa 57  Q
    |||||||||||||  |||||||||||| |||||||||||||| | ||||||||||||    
T  14466646 tgtgttctctctttctttctctcgctgctgttttctactttt-gtttgtgattataa 14466701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 28241286 - 28241237
Alignment:
Q  22 tcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  28241286 tcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 28241237  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 14458727 - 14458683
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  14458727 gttgttttctacttttggcttgt-att-taattgttccatacacttt 14458683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 33309203 - 33309254
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  33309203 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgcttt 33309254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 33311472 - 33311523
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  33311472 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgcttt 33311523  T

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Target: scaffold0011 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35890 - 35962
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||    
T  35890 tgtgttctctcttcttttctctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacacttt 35962  T

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Target: scaffold0004 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 80155 - 80228
Alignment:
Q  1 tgtgttctctcttc-ttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  80155 tgtgatctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataatttttccatacacttt 80228  T

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Target: scaffold0045 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 85527 - 85596
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||||| ||||||||||||||||||||||    
T  85527 tgtgttctctcttcttttctctcg---ttgttttctacttttgacttgtgtttataattgttccatacacttt 85596  T

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Target: scaffold0131 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14376 - 14305
Alignment:
Q  1 tgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||| |||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||    
T  14376 tgtgttctctcttcctttctctctc-gctgttttctacttttggcttgtgtttataattgttccatacacttt 14305  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 50335 - 50381
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  50335 gttgttttctacttttggcttgtgtttataattgtttcatacacttt 50381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 52334 - 52380
Alignment:
Q  27 gttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  52334 gttgttttctacttttggcttgtgtttataattgtttcatacacttt 52380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 183608 - 183561
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccataca 69  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  183608 tctcgccgttgttttctacttttggcttgt-att-taattgttccataca 183561  T

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Target: scaffold1674 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 1418 - 1367
Alignment:
Q  20 tctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  1418 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 4317 - 4360
Alignment:
Q  29 tgttttctacttttggcttgtgattataattgttccatacactt 72  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||    
T  4317 tgttttctacttttggcttgtgtttataattattctatacactt 4360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 41448 - 41399
Alignment:
Q  22 tcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  41448 tcgccgttgttttctacttttggcttgt-att-taattgttccatacacttt 41399  T

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Target: scaffold0468 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1634 - 1566
Alignment:
Q  1 tgtgttctctctt-cttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacacttt 73  Q
    ||||||||||||| ||||||||||    ||||||||||||||||||||||| ||||||   |||||||||||||    
T  1634 tgtgttctctctttcttttctctca---ttgttttctacttttggcttgtgtttataa--cttccatacacttt 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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