View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16504_low_31 (Length: 385)
Name: NF16504_low_31
Description: NF16504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16504_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 20 - 319
Target Start/End: Complemental strand, 43374670 - 43374371
Alignment:
| Q |
20 |
ggccgccactcgtcaccaaaaagtatcacgtcaggcttaatataaagaaactcattggatgcaatcctatacgtcaatcttcttcaaaattagcgattca |
119 |
Q |
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| T |
43374670 |
ggccgccactcgtcaccaaaaagtatcacgtcaggcttaatgtaaagaaactcattggatgcaatcctatacgtcaatcttcttcaaaattagcgattca |
43374571 |
T |
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| Q |
120 |
ggttaaatggaaaggtcctaagtcaacactttattccttgcgacgaggctccgtcgcaagaaatttcacaagagaggctgtcatggaatacgacgacttt |
219 |
Q |
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| T |
43374570 |
agttaaatggaaaggtcctaagtcaacactttattccttgcgacgaggctccgtcgcaagaaatttcacaagagaggctgtcatggaatacgacgacttt |
43374471 |
T |
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| Q |
220 |
tctgctggtttcgtcgtaaattttgatgaagaatttcatcatctttgtaatctcaatggttacaacaaagacaatgtgttgtttcatccgtgggaaatcg |
319 |
Q |
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| T |
43374470 |
tctgctggtttcgtcgtaaattttgatgaagaatttcatcatctttgtaatctcaatggttacaacaaagacaatgtgttgtttcatccgtgggaaatcg |
43374371 |
T |
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