View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16507_high_11 (Length: 432)
Name: NF16507_high_11
Description: NF16507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16507_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 18 - 416
Target Start/End: Original strand, 3136081 - 3136479
Alignment:
| Q |
18 |
gtgatgacatttttcaattattcaagttaaatctttggtnnnnnnnnnggttaaatctttgatgtcactataataatagcaaactcaccttataataaca |
117 |
Q |
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| T |
3136081 |
gtgatgacatttttcaattattcaagttaaatctttagtaaaaaaaaaggttaaatctttgatgtcactataataatggcaaactcaccttataataaca |
3136180 |
T |
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| Q |
118 |
gatgtctaaatgttaacttggtaacaatctttgaatgtgaaactgattgttagttgaggaaaatttacctgttgagctgttgtcaactgaaacactttaa |
217 |
Q |
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| T |
3136181 |
gatgtctaaatgttaacttggtaacaatctttgaatgtgaaactgattgttagttgaggaaaatttacctgttgagctgttgtcaactgaaacactttaa |
3136280 |
T |
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| Q |
218 |
actcttgtgttttatgtgccggatcatcaatatcagatatgtgaatatgtcaaactaatctgcgtttctttgagtttgaagaaaatattggaggtttcat |
317 |
Q |
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| T |
3136281 |
actcttgtgttttatgtaccggatcatcaatatcagatatgtgaatatgtcaaactaatctgcgtttctttgagtttgaagaaaatattggaggtttcat |
3136380 |
T |
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| Q |
318 |
gtaaatcatattgttattgttcttttgtttgattagttaatatttacttacttattgcagatatgatctcttgcataatgcacatcttaatcttgaggg |
416 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3136381 |
gtaaatcatattgttattgttcttttgtgtgattagttaatattgacttacttattgcagatatgatctcttgcataatgcacatcttaatcttgaggg |
3136479 |
T |
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