View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16507_high_25 (Length: 206)
Name: NF16507_high_25
Description: NF16507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16507_high_25 |
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Alignment Details
Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 21145236 - 21145062
Alignment:
| Q |
19 |
cactccccattaaccttcaagg-tcttaaacaatttccacctcgtcttgccttcatacaattatggaaaaagttggtgttagaatccccttttttaagcc |
117 |
Q |
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|||||||||||||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
21145236 |
cactccccattaaccttcaaagctcttaaacaatttccacttcatcttgccttcatacaattatggaaaaagttggtgttagaatccccttctttaagcc |
21145137 |
T |
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| Q |
118 |
acttgatacgagatctttgcaccaccaatgaatcttttgctttaagaagactccataaagcacaaattttttctt |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
21145136 |
acttgatacgagatctttgcaccaccaatgaatcttttgctttaagaagactccataaagcacaaaaattttctt |
21145062 |
T |
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