View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16507_low_18 (Length: 407)
Name: NF16507_low_18
Description: NF16507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16507_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 9 - 332
Target Start/End: Original strand, 249401 - 249733
Alignment:
| Q |
9 |
agcagagatgtcagaagaaggaagaaaccaattggatccatgtggaatattggaatcaagcactttgacaaaattagctgctaccatattatgtatatat |
108 |
Q |
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| T |
249401 |
agcagagatgtcagaagaaggaagaaaccaattggatccatgtggaatattggaatcaagcactttgacaaaattagctgctaccatattatgtatatat |
249500 |
T |
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| Q |
109 |
tgttgtgtgacagttggagtatttacggttcaatttggattgattttgagacaaaagtagtcagtcattacatccaaatattaaaataacaaat-----g |
203 |
Q |
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| T |
249501 |
tgttgtgtgacagttggagtatttgcggttcaatttggattgattttgagacaaaagt----agtcattacatccaaatattaaaataacaaatggttcg |
249596 |
T |
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| Q |
204 |
gttcggatcggtttgaattaaaccgggattacaaactagtaattaacatcagcacacatgacaagtgcgagacttaatca-----------atttattta |
292 |
Q |
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| T |
249597 |
gttcggatcggtttgaattaaaccgggattacaaac---taattaacatcagcacacatgacaagtgcgagacttaatcaataatattaatatttattta |
249693 |
T |
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| Q |
293 |
gattatgttagatgttaacctatgtaacaatgccaagtgc |
332 |
Q |
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| T |
249694 |
gattatgttagatgttaacctatgtaacaatgccaagtgc |
249733 |
T |
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