View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16508_low_25 (Length: 308)
Name: NF16508_low_25
Description: NF16508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16508_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 2595969 - 2596260
Alignment:
| Q |
1 |
atactcatcatcttgatgttgtaaagactcagactcaacaaccaaaccaaaatgtccatgtgttttagcaacacaaacatttgttgctaaaggttttgtt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2595969 |
atactcatcatcttgatgttgtaaagactcagactcaacaaccaaaccaaaatgtccatgtgttttagcaacacaaacatttgttgctaaaggttttgtt |
2596068 |
T |
|
| Q |
101 |
attgcaagtgtcatttttccatttccttcaaaacttacacataatggtttcactttgatacctttttcttcttggctcttgaaatttgtagcattgttga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
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| T |
2596069 |
attgcaagtgtcatttttccatttccttcaaaacttacacataatggtttcactttgatacctttttcttcttggttgttgaaatttgtagcattgttga |
2596168 |
T |
|
| Q |
201 |
aatcaattgtgatgagtttttcaccagcttcaattccaagttgaaaagggttactactagaatttgaatcttcatcagcattgtaagctaaa |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2596169 |
aatcaattgtgatgagtttttcaccagcttcaattccaagttgaaaagggttactactagaatttgaatcttcatcagcattgtaagctaaa |
2596260 |
T |
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