View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16511_high_5 (Length: 569)

Name: NF16511_high_5
Description: NF16511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16511_high_5
NF16511_high_5
[»] chr3 (40 HSPs)
chr3 (1-162)||(52410021-52410183)
chr3 (240-407)||(51665708-51665875)
chr3 (303-438)||(53163756-53163894)
chr3 (148-246)||(52410314-52410415)
chr3 (485-556)||(52410455-52410526)
chr3 (241-431)||(49893334-49893523)
chr3 (247-431)||(272223-272406)
chr3 (244-438)||(18014668-18014861)
chr3 (245-431)||(48725274-48725459)
chr3 (243-431)||(39074422-39074608)
chr3 (310-434)||(27644001-27644124)
chr3 (299-369)||(12011681-12011751)
chr3 (309-382)||(31436313-31436386)
chr3 (245-437)||(52520678-52520869)
chr3 (334-401)||(26966528-26966595)
chr3 (247-438)||(46352630-46352820)
chr3 (247-431)||(10617284-10617466)
chr3 (355-431)||(41304008-41304083)
chr3 (334-401)||(25743842-25743909)
chr3 (254-436)||(858587-858768)
chr3 (334-431)||(27994387-27994483)
chr3 (341-437)||(17752682-17752777)
chr3 (341-437)||(19054002-19054097)
chr3 (341-401)||(40614462-40614522)
chr3 (244-431)||(4168186-4168372)
chr3 (242-289)||(43787015-43787062)
chr3 (242-289)||(2362956-2363003)
chr3 (322-409)||(34300689-34300775)
chr3 (247-289)||(7468554-7468595)
chr3 (334-404)||(13898979-13899049)
chr3 (341-435)||(41554035-41554126)
chr3 (341-431)||(43786874-43786962)
chr3 (334-368)||(49340124-49340158)
chr3 (374-431)||(2362804-2362860)
chr3 (395-428)||(23516588-23516621)
chr3 (435-464)||(52410407-52410436)
chr3 (359-431)||(23925283-23925354)
chr3 (40-68)||(31652453-31652481)
chr3 (248-288)||(33141030-33141070)
chr3 (397-437)||(43862909-43862949)
[»] chr6 (32 HSPs)
chr6 (246-437)||(34706717-34706908)
chr6 (249-431)||(34712127-34712309)
chr6 (255-431)||(1127818-1127994)
chr6 (299-435)||(31379418-31379552)
chr6 (244-437)||(32929505-32929697)
chr6 (253-434)||(32985199-32985379)
chr6 (244-431)||(392099-392285)
chr6 (333-431)||(22021634-22021732)
chr6 (247-431)||(12145117-12145300)
chr6 (244-436)||(23402136-23402327)
chr6 (245-436)||(4215693-4215883)
chr6 (309-366)||(22021731-22021788)
chr6 (341-436)||(7851254-7851347)
chr6 (341-436)||(20897946-20898039)
chr6 (338-432)||(3246178-3246271)
chr6 (341-431)||(27433495-27433583)
chr6 (246-431)||(2580955-2581139)
chr6 (341-442)||(3515758-3515857)
chr6 (341-431)||(2350655-2350743)
chr6 (334-403)||(252407-252476)
chr6 (336-407)||(26879236-26879306)
chr6 (341-436)||(34396622-34396715)
chr6 (341-431)||(21878442-21878530)
chr6 (378-428)||(34706851-34706901)
chr6 (40-73)||(32931512-32931545)
chr6 (252-284)||(2350657-2350689)
chr6 (46-90)||(7260404-7260448)
chr6 (321-381)||(11633970-11634030)
chr6 (353-437)||(12525716-12525799)
chr6 (397-429)||(20590845-20590877)
chr6 (244-288)||(25165410-25165454)
chr6 (252-284)||(31280326-31280358)
[»] chr1 (44 HSPs)
chr1 (247-436)||(28725905-28726094)
chr1 (247-431)||(38595752-38595936)
chr1 (249-431)||(30664169-30664350)
chr1 (245-431)||(52702144-52702329)
chr1 (234-431)||(27456936-27457134)
chr1 (246-431)||(10679513-10679702)
chr1 (242-431)||(5694324-5694512)
chr1 (244-431)||(29657774-29657960)
chr1 (243-436)||(15227737-15227929)
chr1 (254-431)||(24178470-24178646)
chr1 (326-431)||(37350118-37350222)
chr1 (305-392)||(33644393-33644480)
chr1 (253-437)||(12072068-12072251)
chr1 (244-438)||(18043158-18043351)
chr1 (355-436)||(29683193-29683274)
chr1 (244-437)||(51065745-51065937)
chr1 (305-440)||(17333340-17333473)
chr1 (245-436)||(14350277-14350465)
chr1 (247-334)||(23822523-23822608)
chr1 (341-431)||(9413973-9414061)
chr1 (341-436)||(42770085-42770178)
chr1 (326-436)||(9266808-9266916)
chr1 (341-431)||(29210416-29210504)
chr1 (341-431)||(30294476-30294564)
chr1 (254-431)||(3784720-3784896)
chr1 (355-440)||(39912387-39912471)
chr1 (395-435)||(19940683-19940723)
chr1 (397-429)||(23822528-23822560)
chr1 (341-431)||(13961215-13961302)
chr1 (299-334)||(23789547-23789582)
chr1 (246-289)||(29210538-29210581)
chr1 (394-433)||(48383257-48383296)
chr1 (334-368)||(45844424-45844458)
chr1 (374-431)||(19031942-19031998)
chr1 (384-425)||(19940557-19940598)
chr1 (244-289)||(42769987-42770032)
chr1 (355-439)||(30657603-30657686)
chr1 (252-288)||(30657613-30657649)
chr1 (245-289)||(38701935-38701979)
chr1 (355-431)||(38702041-38702116)
chr1 (252-284)||(38702082-38702114)
chr1 (243-283)||(45844336-45844376)
chr1 (252-284)||(48383260-48383292)
chr1 (252-284)||(52702295-52702327)
[»] chr4 (38 HSPs)
chr4 (248-436)||(16572488-16572676)
chr4 (246-425)||(28119905-28120084)
chr4 (244-437)||(34151118-34151310)
chr4 (297-431)||(22225795-22225929)
chr4 (246-436)||(11893400-11893590)
chr4 (243-436)||(292112-292305)
chr4 (246-431)||(37402758-37402936)
chr4 (309-431)||(55594134-55594255)
chr4 (301-431)||(10110053-10110185)
chr4 (299-394)||(6493751-6493846)
chr4 (234-444)||(29591179-29591388)
chr4 (256-345)||(28120058-28120147)
chr4 (297-438)||(47092590-47092719)
chr4 (322-431)||(8749874-8749982)
chr4 (245-431)||(32217048-32217232)
chr4 (247-431)||(54897311-54897494)
chr4 (341-436)||(43202478-43202571)
chr4 (341-431)||(18067974-18068062)
chr4 (341-438)||(789625-789720)
chr4 (341-437)||(15186240-15186334)
chr4 (300-431)||(32202533-32202663)
chr4 (341-436)||(43944505-43944598)
chr4 (355-438)||(47231980-47232062)
chr4 (242-436)||(16536046-16536239)
chr4 (355-431)||(4268930-4269005)
chr4 (334-410)||(9964744-9964820)
chr4 (246-319)||(16820966-16821039)
chr4 (312-403)||(3999451-3999541)
chr4 (341-440)||(7768932-7769029)
chr4 (344-383)||(24142268-24142307)
chr4 (393-444)||(46688355-46688406)
chr4 (242-289)||(54054673-54054720)
chr4 (334-431)||(20654674-20654774)
chr4 (240-289)||(36395243-36395292)
chr4 (376-428)||(16820980-16821032)
chr4 (395-435)||(25532953-25532993)
chr4 (252-284)||(50619091-50619123)
chr4 (355-431)||(54054551-54054626)
[»] chr8 (43 HSPs)
chr8 (247-431)||(29566703-29566887)
chr8 (238-443)||(42655268-42655472)
chr8 (243-427)||(43714184-43714367)
chr8 (245-431)||(18955696-18955884)
chr8 (261-431)||(39751485-39751655)
chr8 (245-431)||(40267924-40268110)
chr8 (297-409)||(24261390-24261502)
chr8 (256-402)||(39206217-39206363)
chr8 (242-388)||(2490152-2490297)
chr8 (312-401)||(37479600-37479689)
chr8 (242-395)||(2270564-2270716)
chr8 (242-444)||(13643002-13643202)
chr8 (242-444)||(13743427-13743627)
chr8 (247-431)||(34228685-34228868)
chr8 (309-437)||(4811554-4811682)
chr8 (246-436)||(27988499-27988687)
chr8 (246-436)||(28045801-28045989)
chr8 (305-408)||(22199235-22199338)
chr8 (379-436)||(2490320-2490377)
chr8 (242-431)||(30675568-30675755)
chr8 (345-429)||(33899108-33899190)
chr8 (244-436)||(4537741-4537932)
chr8 (247-431)||(29235238-29235421)
chr8 (246-437)||(168463-168653)
chr8 (247-431)||(16888544-16888726)
chr8 (355-431)||(20831661-20831736)
chr8 (341-436)||(33357224-33357317)
chr8 (254-431)||(2805267-2805443)
chr8 (394-431)||(16394207-16394244)
chr8 (341-438)||(29444235-29444330)
chr8 (341-429)||(32113913-32113999)
chr8 (397-428)||(168615-168646)
chr8 (356-431)||(12652633-12652707)
chr8 (397-428)||(16394067-16394098)
chr8 (397-428)||(16888550-16888581)
chr8 (246-288)||(9063051-9063093)
chr8 (341-431)||(37373209-37373296)
chr8 (384-436)||(5725596-5725648)
chr8 (397-429)||(18955845-18955877)
chr8 (395-431)||(23722251-23722287)
chr8 (256-284)||(29444289-29444317)
chr8 (334-402)||(37713989-37714057)
chr8 (334-390)||(42449008-42449064)
[»] chr7 (32 HSPs)
chr7 (247-436)||(6097334-6097523)
chr7 (244-431)||(19434496-19434682)
chr7 (246-436)||(20402387-20402578)
chr7 (246-436)||(34556891-34557078)
chr7 (245-435)||(30923986-30924178)
chr7 (245-421)||(38128304-38128480)
chr7 (297-436)||(32805536-32805675)
chr7 (297-431)||(13106364-13106498)
chr7 (318-431)||(45842844-45842956)
chr7 (244-436)||(34333282-34333472)
chr7 (246-431)||(34606264-34606448)
chr7 (341-436)||(18485959-18486052)
chr7 (247-438)||(29993487-29993677)
chr7 (341-451)||(4628549-4628657)
chr7 (247-431)||(24438480-24438663)
chr7 (341-436)||(12218531-12218624)
chr7 (341-431)||(43594131-43594219)
chr7 (337-404)||(34435744-34435811)
chr7 (334-389)||(41468719-41468774)
chr7 (341-431)||(37631637-37631725)
chr7 (341-431)||(47656983-47657071)
chr7 (334-371)||(4088488-4088525)
chr7 (374-435)||(28262030-28262090)
chr7 (395-428)||(31320381-31320414)
chr7 (341-438)||(34546409-34546504)
chr7 (395-428)||(35791651-35791684)
chr7 (247-284)||(40234666-40234703)
chr7 (253-289)||(1737123-1737159)
chr7 (341-433)||(11686419-11686509)
chr7 (395-431)||(30703692-30703728)
chr7 (334-402)||(38022579-38022647)
chr7 (374-430)||(46716642-46716697)
[»] chr5 (27 HSPs)
chr5 (233-436)||(14214036-14214238)
chr5 (247-413)||(31467740-31467906)
chr5 (299-438)||(21944912-21945051)
chr5 (297-431)||(40608586-40608719)
chr5 (297-436)||(16972174-16972313)
chr5 (298-431)||(39234834-39234966)
chr5 (244-431)||(1383270-1383456)
chr5 (249-404)||(30889432-30889587)
chr5 (298-431)||(32188042-32188173)
chr5 (309-401)||(14349592-14349684)
chr5 (241-431)||(11957961-11958150)
chr5 (341-436)||(10054447-10054540)
chr5 (341-431)||(10069972-10070060)
chr5 (246-431)||(34650832-34651015)
chr5 (341-437)||(13661805-13661899)
chr5 (245-436)||(8787337-8787527)
chr5 (245-437)||(35132519-35132709)
chr5 (334-382)||(6042135-6042183)
chr5 (341-436)||(19647753-19647846)
chr5 (341-431)||(21547489-21547576)
chr5 (341-431)||(35504335-35504423)
chr5 (334-382)||(1069610-1069658)
chr5 (332-407)||(5302365-5302440)
chr5 (397-428)||(35132670-35132701)
chr5 (341-431)||(6283565-6283653)
chr5 (395-428)||(1919620-1919653)
chr5 (334-382)||(29571571-29571619)
[»] chr2 (36 HSPs)
chr2 (247-434)||(31782565-31782752)
chr2 (297-436)||(44854390-44854528)
chr2 (242-431)||(26269988-26270175)
chr2 (298-431)||(5282304-5282437)
chr2 (310-431)||(29771419-29771539)
chr2 (299-431)||(15135772-15135903)
chr2 (247-436)||(45261901-45262096)
chr2 (271-425)||(28178410-28178564)
chr2 (298-431)||(28012005-28012137)
chr2 (242-431)||(20552934-20553122)
chr2 (242-431)||(31438649-31438837)
chr2 (247-436)||(30486208-30486396)
chr2 (354-431)||(44854313-44854388)
chr2 (244-438)||(561515-561708)
chr2 (333-431)||(44331742-44331840)
chr2 (244-432)||(4381797-4381984)
chr2 (245-436)||(27856394-27856584)
chr2 (312-407)||(3336412-3336508)
chr2 (341-431)||(16807318-16807408)
chr2 (341-431)||(16846599-16846689)
chr2 (246-436)||(22068319-22068507)
chr2 (341-431)||(26891758-26891846)
chr2 (309-366)||(44331839-44331896)
chr2 (247-431)||(44587905-44588088)
chr2 (247-431)||(32360869-32361052)
chr2 (341-436)||(32860100-32860193)
chr2 (396-436)||(35851917-35851957)
chr2 (297-436)||(20252738-20252877)
chr2 (397-428)||(32360875-32360906)
chr2 (341-402)||(30834456-30834517)
chr2 (335-412)||(40210229-40210306)
chr2 (355-431)||(1859165-1859240)
chr2 (43-79)||(11496020-11496056)
chr2 (355-431)||(22887753-22887828)
chr2 (245-289)||(28601110-28601154)
chr2 (252-284)||(31438651-31438683)
[»] scaffold0001 (1 HSPs)
scaffold0001 (245-431)||(508985-509172)
[»] scaffold0264 (1 HSPs)
scaffold0264 (341-436)||(22959-23052)
[»] scaffold0021 (1 HSPs)
scaffold0021 (341-436)||(116202-116295)
[»] scaffold0003 (1 HSPs)
scaffold0003 (341-431)||(53780-53868)
[»] scaffold0034 (1 HSPs)
scaffold0034 (355-436)||(95692-95772)
[»] scaffold0188 (1 HSPs)
scaffold0188 (384-440)||(6246-6302)
[»] scaffold0019 (1 HSPs)
scaffold0019 (334-402)||(66430-66498)
[»] scaffold0014 (1 HSPs)
scaffold0014 (393-436)||(68435-68478)
[»] scaffold0190 (1 HSPs)
scaffold0190 (241-431)||(14899-15088)
[»] scaffold0050 (1 HSPs)
scaffold0050 (245-289)||(69369-69413)


Alignment Details
Target: chr3 (Bit Score: 155; Significance: 5e-82; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52410021 - 52410183
Alignment:
Q  1 acataaacattgataatttgagtaagaaaagataagtatcgataataatttaaga-aaatagaagtgatcaaatgcaactaaatatgtcaaacattaaac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52410021 acataaacattgataatttgagtaagaaaagataagtatcgataataatttaagacaaatagaagtgatcaaatgcaactaaatatgtcaaacattaaac 52410120  T
Q  100 aagtttttagtttaaagtgtgagaactccatagatatcatttcagacttgttctatttattct 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52410121 aagtttttagtttaaagtgtgagaactccatagatatcatttcagacttgttctatttattct 52410183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 240 - 407
Target Start/End: Original strand, 51665708 - 51665875
Alignment:
Q  240 ttaataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnn-ggaaattcttatcataaaaggaagttttgttgacttatttat 338  Q
    ||||| ||||||||||||||||||| ||||||||||| | ||||||||||        ||||||||||| ||||||| ||||||| ||||||||||||||    
T  51665708 ttaattagggtcatgctaaccggtg-tcccggggcacgggttaagcatacagaaaaaaggaaattcttaccataaaatgaagtttcgttgacttatttat 51665806  T
Q  339 ggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatg 407  Q
    | |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||    
T  51665807 gaattaattaaacaattttcaatgcaataattaatatataatttctctttttattatccttaacaaatg 51665875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 53163894 - 53163756
Alignment:
Q  303 tcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaac 402  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  53163894 tcttaccataaaagaaagttttgttgacttatttatggattaattaaacaattttcaatccagtaattaacatataatttccctatttattatccttaac 53163795  T
Q  403 ---caatgccccgggggcaccggttagcattttcctttt 438  Q
       || ||||| ||||||||||||||| |||| ||||||    
T  53163794 cagcagtgccctgggggcaccggttagtatttccctttt 53163756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 52410314 - 52410415
Alignment:
Q  148 tgttctatttattctactaatgattatctgtgacaatactcacaccctttcttattgatgtttactttccaacacctaaacca---tgcagtattttaat 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||    
T  52410314 tgttctatttattctactaatgattatctgtgacaatactcacaccctttcttattgatgtttattttccaacacctaaaccatgctgcagtattttaat 52410413  T
Q  245 aa 246  Q
    ||    
T  52410414 aa 52410415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 485 - 556
Target Start/End: Original strand, 52410455 - 52410526
Alignment:
Q  485 ctcttagttctcattaccgttcattagaaggttcctataagtcataaacaaagcatttaattaggtcaaaag 556  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52410455 ctcttagttctcattaccgttcattagaaggttcctataagtcataaacaaagcatttaattaggtcaaaag 52410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 241 - 431
Target Start/End: Complemental strand, 49893523 - 49893334
Alignment:
Q  241 taataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatg 339  Q
    ||||| |||||  |||||||||||| |||||||||||||||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||     
T  49893523 taatatgggtccggctaaccggtgcccccggggcactgattaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattata 49893424  T
Q  340 gattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||    
T  49893423 gattaattacacaattt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcattt 49893334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 247 - 431
Target Start/End: Complemental strand, 272406 - 272223
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  |||||    
T  272406 gggtcctgctaaccggtgcccccggggcaccgattaagcataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaa 272307  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||    
T  272306 ttacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcattt 272223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 438
Target Start/End: Complemental strand, 18014861 - 18014668
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||       ||||||| |||||||||||||||  | || || ||||  |||| | |    
T  18014861 taagggtcttgctaactggtgcccccggggcactgattaagcataccataaaaggaaattattatcataaaaggaaactgtttttaactttattatagtt 18014762  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||| | |||| || |||||||| || ||||||||||||||| |||||||||| ||||||    
T  18014761 taattacacaattt-caatgcattaactactatataatttactttttcat-atccttaatcagtgccccgggggcaccagttagcatttccctttt 18014668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 431
Target Start/End: Complemental strand, 48725459 - 48725274
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatt 343  Q
    ||||||| |||||||| ||| ||||||||||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  |||    
T  48725459 aagggtcctgctaacccgtggtcccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatt 48725360  T
Q  344 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||| ||||||| ||||||| ||||||  ||||||||||| |||| || ||||||||||| |||||| |||||||||||||||||||    
T  48725359 aattacacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgcccccggggcaccggttagcattt 48725274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 431
Target Start/End: Complemental strand, 39074608 - 39074422
Alignment:
Q  243 ataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggat 342  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||||||       || |||| ||| |||||||||||  | | ||||| |  ||||  ||    
T  39074608 ataagggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttgacattattataaat 39074509  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| ||||||||||||||||||||||||||    
T  39074508 taattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcattt 39074422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 27644124 - 27644001
Alignment:
Q  310 ataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgcc 409  Q
    ||||||| || ||||||||||||||||| |||||||||| |||||||| |||| ||||||||  |||||||||  ||||||| || | ||||||| ||||    
T  27644124 ataaaagaaaattttgttgacttatttaaggattaattacacaatttttaatgtaataattactatataattt-actttttagtaactttaaccagtgcc 27644026  T
Q  410 ccgggggcaccggttagcattttcc 434  Q
    |  | | ||||||||||||||||||    
T  27644025 ctagagacaccggttagcattttcc 27644001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 12011751 - 12011681
Alignment:
Q  299 aaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataat 369  Q
    |||||| || |||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  12011751 aaattcataccataaaagaaagttttgttgacttatttatgaattaattaaccaattttcaatgcactaat 12011681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 31436386 - 31436313
Alignment:
Q  309 cataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataattt 382  Q
    |||||||| || ||||||||||||||||||| |||||||| |||||||| |||||||||||||  |||||||||    
T  31436386 cataaaagaaaattttgttgacttatttatgaattaattacacaatttttaatgcaataattactatataattt 31436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 437
Target Start/End: Complemental strand, 52520869 - 52520678
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatt 343  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||          |||| ||| |||||||||||  | || ||||| |  ||||  |||    
T  52520869 aagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaatt 52520770  T
Q  344 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| |||||||||||||||||||||||||| |||||    
T  52520769 aattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttcccttt 52520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 26966595 - 26966528
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaa 401  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||  |||||| |||||||||    
T  26966595 tttatggattaattaaacaattttcaatgcaataactactatataatttctttttttagtatccttaa 26966528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 247 - 438
Target Start/End: Complemental strand, 46352820 - 46352630
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgt-tgacttatttatggattaa 345  Q
    ||||| |||||||||||||  ||||||||| | ||||||||||       || |||| ||| |||||||||||  | | | ||||||  ||||  |||||    
T  46352820 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttctgactttattatcaattaa 46352721  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    ||| ||||||| ||||||| ||| ||   |||||||||| |||| || ||||||||||| |||||||||||||||||||||||||| ||||||    
T  46352720 ttacacaattt-caatgcattaactactgtataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcatttccctttt 46352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 431
Target Start/End: Original strand, 10617284 - 10617466
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| ||||||||||||| |||||||||| | ||||||||||       || |||| ||| ||||||||||| || || |||||||  ||||  |||||    
T  10617284 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaa 10617383  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| |||||||| |||||| ||| ||  ||||||||||| |||||| ||||||||| || ||  |||||||||||||||| |||||    
T  10617384 ttacacaatttt-aatgcattaactactatataatttcctttttta-tatccttaatcagtg-tccgggggcaccggttaacattt 10617466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 41304083 - 41304008
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| ||||||  ||||||||||| |||| || ||||||||||| |||||||| |||||||||||||||||    
T  41304083 tttcaatgcattaattactatataatttcctttttcat-atccttaaccactgccccggaggcaccggttagcattt 41304008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 25743909 - 25743842
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaa 401  Q
    |||||| |||||||| |||||||| |||||||||||||  ||||||||||| |||||| |||||||||    
T  25743909 tttatgaattaattacacaatttttaatgcaataattactatataatttccttttttagtatccttaa 25743842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 254 - 436
Target Start/End: Complemental strand, 858768 - 858587
Alignment:
Q  254 gctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaagg-aagttttgttgacttatttatggattaattaaaca 352  Q
    |||||||||||| |||||||||| | ||||||||||       ||||||| ||| ||||||||| || | || |||||||  ||||  |||||||| |||    
T  858768 gctaaccggtgcccccggggcacgggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattacaca 858669  T
Q  353 attttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    | |||||||||| ||| ||  ||||||||| |||||||  |||||||||| | ||| | ||||||||||||| |||||| ||||    
T  858668 a-tttcaatgcattaactactatataattt-cctttttcatatccttaactagtgcactgggggcaccggtttgcatttccctt 858587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 431
Target Start/End: Original strand, 27994387 - 27994483
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||||||| | |||||||| | || ||||||  ||| ||||||  |||||| |||||||||||| ||||||||||||| |||||| |||||    
T  27994387 tttatggattaattacataattttcactacattaattactataaaatttct-tttttagtatccttaaccagtgccccgggggcatcggttaacattt 27994483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 17752777 - 17752682
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||||||| ||||||||||| ||||||| ||  |||| |||| || ||||| |||||||||||| |||||| |||| | |||||| |||||||||||    
T  17752777 attaattacacaattttcaacgcaataaatactatatgatttaccattttagtatccttaaccagtgcccc-ggggaaacggttaacattttccttt 17752682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 19054097 - 19054002
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||||||| ||||||||||| ||||||| ||  |||| |||| || ||||| |||||||||||| |||||| |||| | |||||| |||||||||||    
T  19054097 attaattacacaattttcaacgcaataaatactatatgatttaccattttagtatccttaaccagtgcccc-ggggaaacggttaacattttccttt 19054002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 40614522 - 40614462
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaa 401  Q
    |||| ||| ||||||||||||||||||| ||  |||||||||||||||||| |||||||||    
T  40614522 attagttacacaattttcaatgcaataactactatataatttccctttttagtatccttaa 40614462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 431
Target Start/End: Complemental strand, 4168372 - 4168186
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| ||||||||||||| ||||||| || | ||||||||||       |  |||| ||| |||||||| ||  | || |||||||  ||||  ||    
T  4168372 taagggtcctgctaaccggtgcccccggggtacgggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaat 4168273  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||| ||||||| |||| || ||| ||  ||||||||||| ||||||| ||||||||||| | |||||| |||||||||||||||||    
T  4168272 taattacacaattt-caatacattaactactatataatttccttttttat-atccttaaccagttccccggaggcaccggttagcattt 4168186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 43787062 - 43787015
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  43787062 aataagggtcctgctaaccggtgcccccggggcactggttaagcatac 43787015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 2363003 - 2362956
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    |||||||||| ||||||||| || | ||||||||||||||||||||||    
T  2363003 aataagggtcctgctaaccgatgtttccggggcactgattaagcatac 2362956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 409
Target Start/End: Original strand, 34300689 - 34300775
Alignment:
Q  322 tttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgcc 409  Q
    ||||||||||| |||||| ||| |||| |||| |||||||| ||||| ||   |||||||||  ||||||||||||||||||| ||||    
T  34300689 tttgttgactt-tttatgaattgattacacaactttcaatgtaataactactgtataatttcattttttattatccttaaccagtgcc 34300775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 7468595 - 7468554
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  7468595 gggtcctgctaaccggtgctcc-ggggcactgattaagcatac 7468554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 13898979 - 13899049
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 404  Q
    ||||||||||||||| | |||||||||| |||||||||  ||||||||| | ||||||  ||| |||||||    
T  13898979 tttatggattaattacaaaattttcaatacaataattactatataattttcttttttagcatctttaacca 13899049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 41554035 - 41554126
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcct 435  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||| |||||| |||| ||||||||||||||    
T  41554035 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgcaccgggg-caccagttagcattttcct 41554126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 43786962 - 43786874
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | | ||||||| |||||||| |||||||||||||||||    
T  43786962 attaattacacaattt-caatgcattaactactatataatttcctttttcat-accattaaccagtgccccggaggcaccggttagcattt 43786874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 368
Target Start/End: Complemental strand, 49340158 - 49340124
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataa 368  Q
    ||||||||||||||| |||||||||||||||||||    
T  49340158 tttatggattaattacacaattttcaatgcaataa 49340124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 431
Target Start/End: Complemental strand, 2362860 - 2362804
Alignment:
Q  374 atataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||| |||| || ||||||||||| ||| ||||| ||||||||||||||||    
T  2362860 atataatttcctttttcat-atccttaaccattgcaccgggagcaccggttagcattt 2362804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 428
Target Start/End: Original strand, 23516588 - 23516621
Alignment:
Q  395 tccttaaccaatgccccgggggcaccggttagca 428  Q
    |||||||||| |||||||||||||||||||||||    
T  23516588 tccttaaccagtgccccgggggcaccggttagca 23516621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 464
Target Start/End: Original strand, 52410407 - 52410436
Alignment:
Q  435 ttttaataatcaccaaatttctctttcttt 464  Q
    ||||||||||||||||||||||||||||||    
T  52410407 ttttaataatcaccaaatttctctttcttt 52410436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 431
Target Start/End: Complemental strand, 23925354 - 23925283
Alignment:
Q  359 aatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||| ||||||  ||||||||||| |||||| ||| |||||||| | ||||||||| ||| ||||||||||    
T  23925354 aatgcattaattactatataatttcctttttta-tattcttaaccagttccccgggggtaccagttagcattt 23925283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 31652453 - 31652481
Alignment:
Q  40 cgataataatttaagaaaatagaagtgat 68  Q
    |||||||||||||||||||||||||||||    
T  31652453 cgataataatttaagaaaatagaagtgat 31652481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 33141070 - 33141030
Alignment:
Q  248 ggtcatgctaaccggtgctcccggggcactgattaagcata 288  Q
    |||| |||||||||||||| |||||| ||||||||||||||    
T  33141070 ggtcttgctaaccggtgcttccggggtactgattaagcata 33141030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 43862949 - 43862909
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  43862949 cttaaccaatgccccaggggcaccggttaacattctccttt 43862909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 2e-72; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 246 - 437
Target Start/End: Complemental strand, 34706908 - 34706717
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaa 345  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||       ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34706908 agggtcttgctaaccggtgcccccggggcactggttaagcatacgaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 34706809  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||    
T  34706808 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccggtgcccccggggcaccggttagcatttcccttt 34706717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 249 - 431
Target Start/End: Original strand, 34712127 - 34712309
Alignment:
Q  249 gtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaatta 348  Q
    ||||||||||||||||| |||||||||||  ||||||||||       ||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  34712127 gtcatgctaaccggtgcccccggggcactagttaagcatacaaaaaatggaaattcttaccataaaaggaagttttgttgacttatttatagattaatta 34712226  T
Q  349 aacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    || ||  || |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  34712227 aaaaaaatttaatgcaataattaacatataatttccctttttattatccttaaccagtgccccggaggcaccggttagcattt 34712309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 255 - 431
Target Start/End: Complemental strand, 1127994 - 1127818
Alignment:
Q  255 ctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaat 354  Q
    ||||||||||| | |||||||||| ||||||||||       | ||||||||| |||||||  |||||||||||||||||||||  ||||||||||||||    
T  1127994 ctaaccggtgccctcggggcactggttaagcatacaaaaaaagaaaattcttaccataaaaaaaagttttgttgacttatttataaattaattaaacaat 1127895  T
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| || |||| |||||||||||    
T  1127894 tttcaatgcaataattaacatataatttccctttttattatccttaaccggtgcccccggagcactggttagcattt 1127818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 299 - 435
Target Start/End: Original strand, 31379418 - 31379552
Alignment:
Q  299 aaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 398  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  31379418 aaattcttaccataaaaggaagttatgttgacttatttatggattaattaaacaattttaaatgcaataattaatatataatttccctttttattatcct 31379517  T
Q  399 taaccaatgccccgggggcaccggttagcattttcct 435  Q
    |||||  | |||  ||| |||| ||||||||||||||    
T  31379518 taaccggtaccc--gggacaccagttagcattttcct 31379552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 244 - 437
Target Start/End: Original strand, 32929505 - 32929697
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  ||    
T  32929505 taagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaat 32929604  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||| |||| || | ||||||||| |||||||||||||||||||||||||| |||||    
T  32929605 taattacacaattt-caatgcattaattaatatataatttcctttttcat-acccttaaccattgccccgggggcaccggttagcatttcccttt 32929697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 434
Target Start/End: Original strand, 32985199 - 32985379
Alignment:
Q  253 tgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaattaaac 351  Q
    ||||||||||||| |||||||||||| ||||||||||       || |||| |||||||||||||||  | || |||||||  ||||  |||||||| ||    
T  32985199 tgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacac 32985298  T
Q  352 aattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcc 434  Q
    ||||| |||| || ||| ||  ||||||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  32985299 aattt-caatacattaactactatataatttccttttttat-atccttaaccaatgccccgagggcaccggtttgcattttcc 32985379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 431
Target Start/End: Complemental strand, 392285 - 392099
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||       |  |||| ||| |||||||||||  | || ||||| |  ||||  ||    
T  392285 taagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaat 392186  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| ||||||||||||||||||||||||||    
T  392185 taattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcattt 392099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 431
Target Start/End: Complemental strand, 22021732 - 22021634
Alignment:
Q  333 atttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||| |||| |||||||||||||||||  |||||| |||  |||||| || ||||||| | |||||||||||||||| ||| |||||    
T  22021732 atttatggattaattacacaagtttcaatgcaataattactatataaattctttttttagtaaccttaactagtgccccgggggcaccgattaacattt 22021634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 431
Target Start/End: Original strand, 12145117 - 12145300
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| |||||||||||||  |||| |||||| ||||||||||       ||||||| |||||||||||||||  | || |||||||  ||||  |||||    
T  12145117 gggtcctgctaaccggtgcctccggagcactggttaagcatactataaaaggaaattattatcataaaaggaaactgtttttgactttattataaattaa 12145216  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||| | ||| | ||||||||||||||||||||    
T  12145217 ttacacaattt-caatgcattaactactatataatttcctttttcat-atccttaacaagtgcactgggggcaccggttagcattt 12145300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 436
Target Start/End: Complemental strand, 23402327 - 23402136
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| |||||||||||||  ||||||||| | ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  ||    
T  23402327 taagggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaat 23402228  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||  ||||||| ||||||| ||||||  ||||||||||| |||| || ||||||||||| |||||||| |||||| |||||||||| ||||    
T  23402227 taatttcacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgccccggaggcaccagttagcatttccctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 436
Target Start/End: Complemental strand, 4215883 - 4215693
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatt 343  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||||       ||||||| ||| |||||||||||  | || ||||| |  ||||  |||    
T  4215883 aagggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaatt 4215784  T
Q  344 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| ||  || ||||||| |||||||||||||||||||| ||||| ||||    
T  4215783 aattacacaattt-caatgcattaactattatataatttcctttttcatactc-ttaaccagtgccccgggggcaccggttaacatttccctt 4215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 366
Target Start/End: Complemental strand, 22021788 - 22021731
Alignment:
Q  309 cataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaat 366  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||    
T  22021788 cataaaaggaaattttgttgacttatttatgaattaattacacaagtttcaatgcaat 22021731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 7851254 - 7851347
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| |||||||| |||||| ||||||  ||||||||| | |||| || ||||||||||| ||||| |||||||||||||||||||| ||||    
T  7851254 attaattacacaatttt-aatgcattaattactatataattttctttttcat-atccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 20898039 - 20897946
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||||| |||||||||||||||||||| ||||    
T  20898039 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccctgggggcaccggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 3246178 - 3246271
Alignment:
Q  338 tggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcatttt 432  Q
    ||||||||||| |||||||| |||||||||||||   |||||||| |||||||| ||||||||| || ||| ||  |||||||||||| ||||||    
T  3246178 tggattaattacacaatttttaatgcaataattactgtataattt-cctttttagtatccttaatcagtgctccaagggcaccggttaacatttt 3246271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 27433583 - 27433495
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| |||||||| |||||| ||| ||  ||||||||||| |||| || | ||||||||| ||||||||||||||||||||||||||    
T  27433583 attaattacacaatttt-aatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcattt 27433495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 431
Target Start/End: Complemental strand, 2581139 - 2580955
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatta 344  Q
    |||||| ||||||||||||||||||||| | || ||||||||||       || |||| ||| ||||||||||| || || |||||||  ||||  ||||    
T  2581139 agggtcctgctaaccggtgctcccggggtattggttaagcataccataaaagggaattattaccataaaaggaaattatttttgactttattataaatta 2581040  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||| | || |||||||||| ||| ||  ||||||||||| |||||| |||| ||||||| | || |  ||||||||||||||||||    
T  2581039 attacataa-tttcaatgcattaactactatataatttcctttttta-tatcattaaccagtacctcaagggcaccggttagcattt 2580955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 3515857 - 3515758
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttttaa 440  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| ||||| |||||||||||||||||||| ||||| ||    
T  3515857 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccctgggggcaccggttagcatttccctttaaa 3515760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 2350743 - 2350655
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| |||| || ||| ||  ||||||||||| |||| || ||||||||||| ||||||||| ||||||||||||||||    
T  2350743 attaattacacaattt-caatacattaactactatataatttcctttttcat-atccttaaccagtgccccgggagcaccggttagcattt 2350655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 403
Target Start/End: Original strand, 252407 - 252476
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacc 403  Q
    |||||| ||| |||| |||||||||||| |||||| ||| ||||||||||  |||||| |||||||||||    
T  252407 tttatgaattgattacacaattttcaatacaataactaatatataatttctatttttagtatccttaacc 252476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 26879236 - 26879306
Alignment:
Q  336 tatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatg 407  Q
    |||||||| |||| |||||||||||| |||||||||  ||| ||||| |||||||| |||| ||||||||||    
T  26879236 tatggattgattacacaattttcaatacaataattactatacaattt-cctttttagtatcattaaccaatg 26879306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 34396622 - 34396715
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||  || || |||||||||||||||||||| ||||    
T  34396622 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaacctgtgtcctgggggcaccggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 21878442 - 21878530
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| ||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||  ||||| || |||||||||||||||||    
T  21878442 attaattaaataattt-caatgcattaactactatataatttcctttttcat-atccttaacccgtgcccgggaggcaccggttagcattt 21878530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 34706851 - 34706901
Alignment:
Q  378 aatttccctttttattatccttaaccaatgccccgggggcaccggttagca 428  Q
    ||||||| |||||  ||| |||||||| |||||||||||||||||||||||    
T  34706851 aatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagca 34706901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 32931545 - 32931512
Alignment:
Q  40 cgataataatttaagaaaatagaagtgatcaaat 73  Q
    ||||||||||||||||||||||||||||| ||||    
T  32931545 cgataataatttaagaaaatagaagtgattaaat 32931512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 2350657 - 2350689
Alignment:
Q  252 atgctaaccggtgctcccggggcactgattaag 284  Q
    ||||||||||||||||||||||||||| |||||    
T  2350657 atgctaaccggtgctcccggggcactggttaag 2350689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 7260448 - 7260404
Alignment:
Q  46 taatttaagaaaatagaagtgatcaaatgcaactaaatatgtcaa 90  Q
    ||||||||||||| |||||||||| |||| |||||||| ||||||    
T  7260448 taatttaagaaaaaagaagtgatcgaatgtaactaaatgtgtcaa 7260404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 11634030 - 11633970
Alignment:
Q  321 ttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatt 381  Q
    |||| ||||| | |||||| |||||||| ||||||||||||||||||| ||  ||||||||    
T  11634030 tttttttgacatttttatgtattaattacacaattttcaatgcaataactactatataatt 11633970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 12525799 - 12525716
Alignment:
Q  353 attttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||||||||| | ||| ||  ||||||||||| |||| || | ||||||||| | |||||| ||||||||||||||||| |||||    
T  12525799 attttcaatgtattaactactatataatttcctttttcat-acccttaaccagtaccccggaggcaccggttagcatttcccttt 12525716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 429
Target Start/End: Complemental strand, 20590877 - 20590845
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagcat 429  Q
    ||||||||||||||| |||||||||||||||||    
T  20590877 cttaaccaatgcccccggggcaccggttagcat 20590845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 25165410 - 25165454
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcata 288  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||    
T  25165410 taagggtcctgctaaccggtgctcccagggcattggttaagcata 25165454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 31280326 - 31280358
Alignment:
Q  252 atgctaaccggtgctcccggggcactgattaag 284  Q
    ||||||||||||||||||| |||||||||||||    
T  31280326 atgctaaccggtgctcccgaggcactgattaag 31280358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 3e-71; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 247 - 436
Target Start/End: Original strand, 28725905 - 28726094
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaat 346  Q
    ||||| ||||||||||||  |||||||||||| ||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28725905 gggtcttgctaaccggtgtccccggggcactggttaagcatacgaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaat 28726004  T
Q  347 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  28726005 taaacaattttcaatgcaataattaacatataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttccctt 28726094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 247 - 431
Target Start/End: Original strand, 38595752 - 38595936
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaat 346  Q
    |||||||||||||||||||  ||||||||||| |||||||| |       | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38595752 gggtcatgctaaccggtgcctccggggcactggttaagcatgcaaaaaaagaaaattcttaccataaaaggaagttttgttgacttatttatggattaat 38595851  T
Q  347 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38595852 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgccccgggggcaccggttagcattt 38595936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 249 - 431
Target Start/End: Original strand, 30664169 - 30664350
Alignment:
Q  249 gtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaatta 348  Q
    ||||||||||||||||| | |||||||||| ||||||||||        |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  30664169 gtcatgctaaccggtgcccacggggcactggttaagcatacaaaaaaaagaaattcttaccataaaaggaagttttgttgacttatttatagattaatta 30664268  T
Q  349 aacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||||||||||||    
T  30664269 aacaattttcaatgcaataattaacatataattttcttttttattatccttaaccaatgccccggaggca-cggttagcattt 30664350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 245 - 431
Target Start/End: Original strand, 52702144 - 52702329
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggatta 344  Q
    ||||||||||| || ||||||||| | |||| || ||||||||||       ||||||| ||| ||||||| |||||||| |||||||||||||||||||    
T  52702144 aagggtcatgcaaatcggtgctcc-gaggcattggttaagcatacaaaaaaaggaaattattaccataaaatgaagtttttttgacttatttatggatta 52702242  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  52702243 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgccccgggagcaccggttagcattt 52702329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 234 - 431
Target Start/End: Original strand, 27456936 - 27457134
Alignment:
Q  234 agtattttaataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaa-ttcttatcataaaaggaagttttgttgactt 332  Q
    ||||||| ||| || ||||||||||| ||||| |||| ||||||  ||||||||||        |||| || ||| ||||||||||||||||||||||||    
T  27456936 agtatttaaattagagtcatgctaactggtgcccccgaggcactcgttaagcatacaaaaaaaagaaaatttttaccataaaaggaagttttgttgactt 27457035  T
Q  333 atttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||  |||||||||||||||| |||||||||    
T  27457036 atttatggattaattaaacaattttcaatgcactaattaacatataatttcactttttattatctttaacccttgccccgggggcaccgattagcattt 27457134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 246 - 431
Target Start/End: Complemental strand, 10679702 - 10679513
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttattta-----tgg 340  Q
    |||||||||||||||||||| |||||| |||   ||||||||||        |||||| ||| |||||||||||||||||||||||||||||     | |    
T  10679702 agggtcatgctaaccggtgcccccgggacacctgttaagcatacaaaaaaaagaaatttttaccataaaaggaagttttgttgacttatttaatttatag 10679603  T
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||    
T  10679602 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc-taaccagtgccccgggagcaccggttaacattt 10679513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 431
Target Start/End: Complemental strand, 5694512 - 5694324
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatgg 340  Q
    |||||||||| ||||||||||||| ||||| |||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||      
T  5694512 aataagggtcctgctaaccggtgcccccggagcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatca 5694413  T
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  5694412 attaattacacaattt-caatgcattaactactatataatttccctttttat-atccttaaccagtgccccggaggcaccggttagcattt 5694324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 244 - 431
Target Start/End: Complemental strand, 29657960 - 29657774
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| ||||||||||||| ||| |||||||| ||||||||||       || |||| ||| || ||||||||  | || |||||||  ||||  ||    
T  29657960 taagggtcctgctaaccggtgcccccagggcactggttaagcataccataaaagggaattattaccaaaaaaggaaactgtttttgactttattatcaat 29657861  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  29657860 taattatacaattt-caatgcattaactactatataatttccttttttat-atccttaaccagtgccccgggggcaccggttagcattt 29657774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 243 - 436
Target Start/End: Complemental strand, 15227929 - 15227737
Alignment:
Q  243 ataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatgga 341  Q
    ||||||||| |||||||||||||  ||||||||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  |    
T  15227929 ataagggtcttgctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaa 15227830  T
Q  342 ttaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||||| ||||||| ||||||| ||||||  ||||||||||| |||| || ||||||||||| |||||| |||| |||||||||||||| ||||    
T  15227829 ttaattacacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgcccccggggtaccggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 431
Target Start/End: Original strand, 24178470 - 24178646
Alignment:
Q  254 gctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttt-tgttgacttatttatggattaattaaaca 352  Q
    |||||||||||| |||||||||||| ||||||||||        |||||| ||| |||||||||||  |  | |||||||  |||| ||||||||| |||    
T  24178470 gctaaccggtgcccccggggcactggttaagcataccataaaatgaaattattaccataaaaggaaactgcttttgactttattatagattaattacaca 24178569  T
Q  353 attttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||||||||||||| ||||||||||||    
T  24178570 attt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgccccgggggcatcggttagcattt 24178646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 37350222 - 37350118
Alignment:
Q  326 ttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggtta 425  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||   |||||| ||||||||| || ||||||| |  |||||||||    
T  37350222 ttgacttatttatggattaattacacaattttcaatgcaacaattaccatataattt-attttttaatatccttaatcagtgccccgagaacaccggtta 37350124  T
Q  426 gcattt 431  Q
    | ||||    
T  37350123 gtattt 37350118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 33644393 - 33644480
Alignment:
Q  305 ttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttat 392  Q
    |||||||||||||||  |||| |||| |||||||| |||||||| ||||||||||||||||||||||  ||||||||| | |||||||    
T  33644393 ttatcataaaaggaaactttgatgacatatttatgaattaattacacaattttcaatgcaataattattatataattttcttttttat 33644480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 437
Target Start/End: Original strand, 12072068 - 12072251
Alignment:
Q  253 tgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaattaaac 351  Q
    ||||||||||||| |||||||||||| ||||||||||        | |||| ||| |||||||| ||  | || |||||||  ||||  |||||||| ||    
T  12072068 tgctaaccggtgcccccggggcactggttaagcataccataaaaaggaattattaccataaaagaaaactgtttttgactttattatcaattaattacac 12072167  T
Q  352 aattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    ||||| ||||||| ||| ||  | ||||||||| |||| || ||||||||||  ||||||||||||||||||||||||||||||||    
T  12072168 aattt-caatgcattaactactacataatttcctttttcat-atccttaaccggtgccccgggggcaccggttagcattttccttt 12072251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 244 - 438
Target Start/End: Complemental strand, 18043351 - 18043158
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||          |||| ||| |||||||| ||  | || ||||| |  ||||  ||    
T  18043351 taagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaagaaaactgtttttgacattattataaat 18043252  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| | ||||||||| |||||||| ||||||||||||||||| ||||||    
T  18043251 taattacacaattt-caatgcattaactactatataatttccttttttat-acccttaaccagtgccccggaggcaccggttagcatttccctttt 18043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 29683274 - 29683193
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||||| ||| ||  ||||||||||| |||||  |||| ||||||| |||||||||||||||||||||||||| ||||    
T  29683274 tttcaatgcattaactactatataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 437
Target Start/End: Original strand, 51065745 - 51065937
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaagg-aagttttgttgacttatttatggat 342  Q
    |||||||| ||||||||||||| || ||||||||| ||||||||||       || |||| ||| ||||||||| || | || |||||||  ||||  ||    
T  51065745 taagggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaat 51065844  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||||| |||| ||||||| || ||| ||  |||||||||  ||||||  |||||||||||| || ||||||| ||||||||||||||| |||||    
T  51065845 taattacacaa-tttcaatacattaactactatataattt-actttttcatatccttaaccagtgtcccggggacaccggttagcatttcccttt 51065937  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 305 - 440
Target Start/End: Original strand, 17333340 - 17333473
Alignment:
Q  305 ttatcataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacc 403  Q
    |||||||||||||||  | || |||||||  ||||| |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||    
T  17333340 ttatcataaaaggaaactgtttttgactttattatgaattaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaacc 17333437  T
Q  404 aatgccccgggggcaccggttagcattttccttttaa 440  Q
    | ||||| |||||||||||||||||||| || |||||    
T  17333438 agtgccc-gggggcaccggttagcatttcccatttaa 17333473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 436
Target Start/End: Original strand, 14350277 - 14350465
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatt 343  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||       |||| || ||| ||||||||||| || || ||||| |  ||||  |||    
T  14350277 aagggtcctgctaaccggtgc-cccggggcactggttaagcataccattaagggaa-ttattaccataaaaggaaattgtttttgacattattataaatt 14350374  T
Q  344 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||| |||||||| |||||| ||| ||  ||||||||||| |||| || | ||||||||  ||| |||||||||||||||||||||| ||||    
T  14350375 aattacacaatttt-aatgcattaactacaatataatttcctttttcat-acccttaaccggtgctccgggggcaccggttagcatttccctt 14350465  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 23822523 - 23822608
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttat 334  Q
    ||||||||||||||||||| ||||||||| || ||||||||||         ||||||||| ||||||||||||||||||||||||||    
T  23822523 gggtcatgctaaccggtgcccccggggcattggttaagcatacaaaaaaa--aaattcttaccataaaaggaagttttgttgacttat 23822608  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 9413973 - 9414061
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||| |||||||| |||||||||   |||||||| | |||||| |||| |||||||||||||| |||||||||||||||||||    
T  9413973 attaattacacagttttcaattcaataattactgtataattttc-tttttaatatctttaaccaatgcccc-ggggcaccggttagcattt 9414061  T

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Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 42770085 - 42770178
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | | ||||||| |||||||||||||||||||||||||| ||||    
T  42770085 attaattacacaattt-caatgcattaactactatataatttcctttttcat-accattaaccagtgccccgggggcaccggttagcatttccctt 42770178  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 436
Target Start/End: Original strand, 9266808 - 9266916
Alignment:
Q  326 ttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggtta 425  Q
    |||||||  ||||| |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| |||| ||||| |||||||||    
T  9266808 ttgactttattatgaattaattacacaattt-caatgcattaaatactatataatttcctttttcat-atccttaaccagtgccgcggggacaccggtta 9266905  T
Q  426 gcattttcctt 436  Q
     ||||| ||||    
T  9266906 acatttccctt 9266916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 29210504 - 29210416
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| |||||||| |||||||||||||||||    
T  29210504 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccggaggcaccggttagcattt 29210416  T

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Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 30294476 - 30294564
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||||||| |||||| ||||| |||||||||    
T  30294476 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccaatgctccggggacaccgattagcattt 30294564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 431
Target Start/End: Original strand, 3784720 - 3784896
Alignment:
Q  254 gctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaattaaaca 352  Q
    |||||||||||| |||||| ||| | ||||||||||       ||||||| ||| |||||||| || || || |||||||  ||||  |||||||| |||    
T  3784720 gctaaccggtgcccccgggacacgggttaagcataccataaaaggaaattattaccataaaagaaaattgtttttgactttattatcaattaattacaca 3784819  T
Q  353 attttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    | |||||||||| ||| ||  ||||||||| |||||||  |||||||||||| ||| | |||||||||| || ||||||    
T  3784820 a-tttcaatgcattaactactatataattt-cctttttcatatccttaaccagtgcactgggggcaccgatttgcattt 3784896  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 355 - 440
Target Start/End: Original strand, 39912387 - 39912471
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttttaa 440  Q
    |||||||||| ||| ||  |||||||||||||||||| ||||||||| || ||||||| | || ||||||| ||||| ||||||||    
T  39912387 tttcaatgcattaactagtatataatttcccttttta-tatccttaatcagtgccccgagtgcgccggttaacatttcccttttaa 39912471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 19940683 - 19940723
Alignment:
Q  395 tccttaaccaatgccccgggggcaccggttagcattttcct 435  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  19940683 tccttaaccagtgccccgggggcaccggttaacattttcct 19940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 429
Target Start/End: Complemental strand, 23822560 - 23822528
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagcat 429  Q
    |||||||||||||||||||||||||||||||||    
T  23822560 cttaaccaatgccccgggggcaccggttagcat 23822528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 13961302 - 13961215
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  |||||||||   |||||  |||||||||||  ||||||||||||||||||||||||||    
T  13961302 attaattacacaattt-caatgcattaactactatataatttt--ttttttatatccttaacccgtgccccgggggcaccggttagcattt 13961215  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 334
Target Start/End: Original strand, 23789547 - 23789582
Alignment:
Q  299 aaattcttatcataaaaggaagttttgttgacttat 334  Q
    ||||||||| ||||||||||||||||||||||||||    
T  23789547 aaattcttaccataaaaggaagttttgttgacttat 23789582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 29210581 - 29210538
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||    
T  29210581 agggtcctgctaaccggtgcccccggggcactggttaagcatac 29210538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 48383257 - 48383296
Alignment:
Q  394 atccttaaccaatgccccgggggcaccggttagcattttc 433  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  48383257 atccttaaccagtgccccgggagcaccggttagcattttc 48383296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 368
Target Start/End: Original strand, 45844424 - 45844458
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataa 368  Q
    ||||||||||||||||||||||||||||| |||||    
T  45844424 tttatggattaattaaacaattttcaatgtaataa 45844458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 19031942 - 19031998
Alignment:
Q  374 atataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||| |||| || ||||||||| |||||||| || ||||||||||||||||    
T  19031942 atataatttcctttttcat-atccttaactaatgcccccggagcaccggttagcattt 19031998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 19940598 - 19940557
Alignment:
Q  384 cctttttattatccttaaccaatgccccgggggcaccggtta 425  Q
    |||||||| | |||||||||| ||||||||||||||||||||    
T  19940598 cctttttagtttccttaaccagtgccccgggggcaccggtta 19940557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 42769987 - 42770032
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    |||||||  ||||||||||||| |||||||||||| ||||||||||    
T  42769987 taagggttctgctaaccggtgcccccggggcactggttaagcatac 42770032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 30657686 - 30657603
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttta 439  Q
    |||||||||| ||| ||  ||||||||||  |||| || || |||||| | ||||||||| |||||||||||||||| |||||||    
T  30657686 tttcaatgcattaactactatataatttcttttttcat-atgcttaactagtgccccgggagcaccggttagcatttccctttta 30657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 30657613 - 30657649
Alignment:
Q  252 atgctaaccggtgctcccggggcactgattaagcata 288  Q
    ||||||||||||||||||||||||||  |||||||||    
T  30657613 atgctaaccggtgctcccggggcactagttaagcata 30657649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 38701935 - 38701979
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    ||||||| ||||||||||||| | |||||||||| ||||||||||    
T  38701935 aagggtcctgctaaccggtgccctcggggcactggttaagcatac 38701979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 38702041 - 38702116
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| ||| ||  ||||| ||||| |||| || | ||||||||| ||||||||| ||||||||||||||||    
T  38702041 tttcaatgcattaactactatatagtttcctttttcat-acccttaaccagtgccccgggagcaccggttagcattt 38702116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 38702114 - 38702082
Alignment:
Q  252 atgctaaccggtgctcccggggcactgattaag 284  Q
    ||||||||||||||||||||||||||| |||||    
T  38702114 atgctaaccggtgctcccggggcactggttaag 38702082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 45844336 - 45844376
Alignment:
Q  243 ataagggtcatgctaaccggtgctcccggggcactgattaa 283  Q
    |||| ||||||||||||||||||| || |||||||||||||    
T  45844336 ataatggtcatgctaaccggtgcttccagggcactgattaa 45844376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 48383292 - 48383260
Alignment:
Q  252 atgctaaccggtgctcccggggcactgattaag 284  Q
    ||||||||||||||||||||||||||| |||||    
T  48383292 atgctaaccggtgctcccggggcactggttaag 48383260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 52702327 - 52702295
Alignment:
Q  252 atgctaaccggtgctcccggggcactgattaag 284  Q
    ||||||||||||||||||||||||||| |||||    
T  52702327 atgctaaccggtgctcccggggcactggttaag 52702295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 1e-70; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 248 - 436
Target Start/End: Original strand, 16572488 - 16572676
Alignment:
Q  248 ggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaatt 347  Q
    |||||||||||||||||| |||||||||||||||||| ||||       ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  16572488 ggtcatgctaaccggtgcccccggggcactgattaagtatacaaaaaaaggaaattcttaccataaaaagaagttttgttgacttatttatggattaatt 16572587  T
Q  348 aaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  16572588 aaacaattttcaatgcaataattaacatataatttctctttttattatccttaaccagtgcctcggaggcaccggttagcattttcctt 16572676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 246 - 425
Target Start/End: Original strand, 28119905 - 28120084
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaa 345  Q
    |||||||||||||||||||   ||||||||||| ||||||||||       ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28119905 agggtcatgctaaccggtgtctccggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 28120004  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggtta 425  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||| |||||    
T  28120005 ttaaacaattttcaatgcaataattaacatataatttctctttttattatccttaaccggtgcccccggggcacaggtta 28120084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 244 - 437
Target Start/End: Complemental strand, 34151310 - 34151118
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaa-ttcttatcataaaaggaagttttgttgacttatttatggat 342  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||        |||| |||||| |||||||| |||||||||||||||||||||||||    
T  34151310 taagggtcatgctaaccggtgctcccggg-cacgggttaagcatacaaaaaaaagaaaattcttaccataaaagaaagttttgttgacttatttatggat 34151212  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||    
T  34151211 taattaaacaattttcaatgcaataattaacatataattttcctttttattatccttaaccagtgcccc-ggggcatcggttagcattttccttt 34151118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 297 - 431
Target Start/End: Original strand, 22225795 - 22225929
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 396  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  22225795 ggaaatttttatcataaaaggaagttttgttgacttatttatggattaattaaacaatttttaatgcaataattaacatatagtttccctttttattatc 22225894  T
Q  397 cttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| || |||||||||||||||||||||||    
T  22225895 cttaaccagtgtcccgggggcaccggttagcattt 22225929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 246 - 436
Target Start/End: Original strand, 11893400 - 11893590
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnn-ggaaattcttatcataaaaggaagttttgttgacttatttatggatta 344  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||        ||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  11893400 agggtcatgctaaccggtgctcc-ggggcactggttaagcatacaaaaaaaaggaaatttttatcataaaatgaagttttgttgacttatttatagatta 11893498  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||| |||||||||| ||||    
T  11893499 attaaataattttcaattcaataattaacatataatttccctttttattatccttaaacagtgccctgggggcacctgttagcatttccctt 11893590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 243 - 436
Target Start/End: Complemental strand, 292305 - 292112
Alignment:
Q  243 ataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggat 342  Q
    |||||| || |||||||||||||  ||||||||| | |||||||| |       ||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  292305 ataaggatcgtgctaaccggtgcctccggggcacgggttaagcatgcaaaaaaaggaaatttttaccataaaaggaagtttggttgacttatttatggat 292206  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |||||| ||||||||||||||||||| ||||    
T  292205 taattaaacaattttcaatgcaataattaacatataatttttctttttattatccttaaccggtgcccccggggcaccggttagcatttccctt 292112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 246 - 431
Target Start/End: Original strand, 37402758 - 37402936
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaa 345  Q
    |||||||||||||||||||| | |||||||||| ||||||||||       ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37402758 agggtcatgctaaccggtgccctcggggcactggttaagcatacaaaaaa-ggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 37402856  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||||      |||||||||||||||||||||||||||||||||| |||||| ||  ||||| ||||||||||||||||    
T  37402857 ttaaacaatttt-----taataattaacatataatttccctttttattatccgtaaccagtg-tccgggagcaccggttagcattt 37402936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 309 - 431
Target Start/End: Complemental strand, 55594255 - 55594134
Alignment:
Q  309 cataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgc 408  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  55594255 cataaaaggaagttttgttgacttacttatggattaattaaacaatttttaatgcaataattaacatataattttcctttttattatccttaaccagtgc 55594156  T
Q  409 cccgggggcaccggttagcattt 431  Q
    ||| | |||||||||||||||||    
T  55594155 ccc-gaggcaccggttagcattt 55594134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 301 - 431
Target Start/End: Original strand, 10110053 - 10110185
Alignment:
Q  301 attcttatcataaaaggaagttttgttgacttatttatggattaattaaacaatttt--caatgcaataattaacatataatttccctttttattatcct 398  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10110053 attcttaccataaaagaaagttttgttgacttatttatagattaattaaacaattttttcaatgcaataattaacatataatttccctttttattatcct 10110152  T
Q  399 taaccaatgccccgggggcaccggttagcattt 431  Q
    ||| || || ||||| |||||||||||||||||    
T  10110153 taatcagtgtcccggaggcaccggttagcattt 10110185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 394
Target Start/End: Original strand, 6493751 - 6493846
Alignment:
Q  299 aaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttatta 394  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6493751 aaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttatta 6493846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 234 - 444
Target Start/End: Complemental strand, 29591388 - 29591179
Alignment:
Q  234 agtattttaataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaagg-aagttttgttgactt 332  Q
    |||||||||||||||||| ||||||||||||| |||||||||||  ||||||||||       || |||| ||| ||||||||| || | || |||||||    
T  29591388 agtattttaataagggtcctgctaaccggtgcccccggggcactagttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactt 29591289  T
Q  333 atttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcatttt 432  Q
      ||||  ||||| || |||| |||||||||| ||| ||  ||||||||| |||| ||  ||| |||||||| ||||||||||||||| ||||||||||     
T  29591288 tattataaattaagtacacaa-tttcaatgcattaactactatataattt-ccttattcatattcttaaccagtgccccgggggcaccagttagcatttc 29591191  T
Q  433 ccttttaataat 444  Q
    ||||||||||||    
T  29591190 ccttttaataat 29591179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 28120058 - 28120147
Alignment:
Q  256 taaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaa 345  Q
    |||||||||| |||||||||| | ||||||||||       ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28120058 taaccggtgcccccggggcacaggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaa 28120147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 438
Target Start/End: Complemental strand, 47092719 - 47092590
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 396  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| || ||           |||| || |||||||||||||    
T  47092719 ggaaatttttatcataaaatgaagttttgttgacttatttatggattaatcaaacaattttc-attca-----------ataactttcctttttattatc 47092632  T
Q  397 cttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||||| || |||||   ||||||||||||||||||||||    
T  47092631 cttaaccagtgtcccggaaacaccggttagcattttcctttt 47092590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 431
Target Start/End: Original strand, 8749874 - 8749982
Alignment:
Q  322 tttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccg 421  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||||||  ||| ||||| | |||||| || ||||| ||| |||||| || ||||||    
T  8749874 tttgttgacttatttatagattaattacacaattttcaatgtaataattattataaaattttcttttttagtaaccttagccagtgcccc-ggagcaccg 8749972  T
Q  422 gttagcattt 431  Q
    ||||||||||    
T  8749973 gttagcattt 8749982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 431
Target Start/End: Complemental strand, 32217232 - 32217048
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggatta 344  Q
    ||||||| || ||||||||||  ||||||||| | ||||||||||       || |||| |||||||||||  || | || |||||||  ||||  ||||    
T  32217232 aagggtcctgttaaccggtgcctccggggcacaggttaagcataccataaaagggaattattatcataaaaaaaactgtttttgactttattataaatta 32217133  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  32217132 attacacaattt-caatgcattaactactatataatttccttttttat-atccttaaccagtgccccgggggcaccagttagcattt 32217048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 247 - 431
Target Start/End: Complemental strand, 54897494 - 54897311
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| |||||||||||||  ||||| ||||| |||| |||||       ||||||| ||| ||||||||||| || || |||||||  ||||  |||||    
T  54897494 gggtcctgctaaccggtgcctccgggacactggttaaacataccataaaaggaaattattaccataaaaggaaattgtttttgactttattataaattaa 54897395  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| || | || ||||||||||| ||||||||||||||||||||||||||    
T  54897394 ttatacaattt-caatgcattaactactatataatttcctttctcat-atccttaaccagtgccccgggggcaccggttagcattt 54897311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 43202478 - 43202571
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| |||||||| |||||| ||||||  ||||||||||| |||| || | ||||||| | |||||||||||||||||||||||||| ||||    
T  43202478 attaattacacaatttt-aatgcattaattactatataatttcctttttcat-acccttaactagtgccccgggggcaccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 18067974 - 18068062
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| |||||||| |||||| ||| ||  ||||||||||| |||| || | ||||||||| ||||||||||||||||||||||||||    
T  18067974 attaattacacaatttt-aatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcattt 18068062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 438
Target Start/End: Original strand, 789625 - 789720
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||  |||||||||||||||||||||||||| ||||||    
T  789625 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaacccgtgccccgggggcaccggttagcatttccctttt 789720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 15186334 - 15186240
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||||||| ||||||| ||||| | ||| ||  ||||||||||| |||| || | ||||||||| |||||||||||||||||||||||||| |||||    
T  15186334 attaattacacaattt-caatggattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 431
Target Start/End: Original strand, 32202533 - 32202663
Alignment:
Q  300 aattcttatcataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 398  Q
    |||| |||||||||||||||  | || |||||||  ||||  |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| |||||    
T  32202533 aattattatcataaaaggaaactgtttttgactttattataaattaattacacaattt-caatgcattaactactatataatttccttttttat-atcct 32202630  T
Q  399 taaccaatgccccgggggcaccggttagcattt 431  Q
    |||||  |||||||||| ||||||||| |||||    
T  32202631 taacccgtgccccggggacaccggttaacattt 32202663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 43944598 - 43944505
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| |||||||| ||||||||||||||||| ||||    
T  43944598 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccggaggcaccggttagcatttccctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 438
Target Start/End: Original strand, 47231980 - 47232062
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||||||| ||| ||  ||||||||||| |||| |  ||||||||||| ||| |||||||||||||||||||||| ||||||    
T  47231980 tttcaatgcattaactattatataatttcctttttcac-atccttaaccagtgctccgggggcaccggttagcatttccctttt 47232062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 436
Target Start/End: Complemental strand, 16536239 - 16536046
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatgg 340  Q
    |||||||||| ||||||||||||| |||||||||||| ||||| ||||          |||| ||| |||||||||||  | || ||||| |  ||||      
T  16536239 aataagggtcctgctaaccggtgcccccggggcactggttaagaataccataaaatagaattattaccataaaaggaaactgtttttgacattattataa 16536140  T
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | |||||| |  |||||||||||||||||||||||||| ||||    
T  16536139 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaatccgtgccccgggggcaccggttagcatttccctt 16536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 4268930 - 4269005
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| ||| ||  ||||| ||||| |||| || | ||||||||| ||||||||||||||||||||||||||    
T  4268930 tttcaatgcattaactactatatagtttcctttttcat-acccttaaccagtgccccgggggcaccggttagcattt 4269005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 9964820 - 9964744
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccc 410  Q
    ||||| ||| ||||| | || |||||||||||||||||| ||||||||||  ||||||  ||||||||||| |||||    
T  9964820 tttattgatcaattacaaaaatttcaatgcaataattaatatataatttctatttttaacatccttaaccactgccc 9964744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 16821039 - 16820966
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaa 319  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||       ||||||| ||| |||||||||||    
T  16821039 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaa 16820966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 3999451 - 3999541
Alignment:
Q  312 aaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacc 403  Q
    ||||||||  ||| ||||||| |||||||||| |||| |||||||||||||||| || ||  || |||||||| |||||| |||| ||||||    
T  3999451 aaaaggaaacttttttgactt-tttatggatttattacacaattttcaatgcaacaactactatgtaatttccttttttagtatcattaacc 3999541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 7769029 - 7768932
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttttaa 440  Q
    |||||||| ||||||| |||| || ||| ||  ||||||||||| |||| || | ||||||||| ||||||||||| |||| ||||||||| ||||||||    
T  7769029 attaattacacaattt-caatacattaactactatataatttcctttttcat-acccttaaccagtgccccgggggtaccgattagcatttcccttttaa 7768932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 383
Target Start/End: Original strand, 24142268 - 24142307
Alignment:
Q  344 aattaaacaattttcaatgcaataattaacatataatttc 383  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  24142268 aattaaacaattttcaatgcaataattactatataatttc 24142307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 46688355 - 46688406
Alignment:
Q  393 tatccttaaccaatgccccgggggcaccggttagcattttccttttaataat 444  Q
    |||||||||||| |||| |||||||||| |||||||||| |||| |||||||    
T  46688355 tatccttaaccagtgcctcgggggcaccagttagcatttcccttataataat 46688406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 54054720 - 54054673
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    |||||||||| ||| ||||||||| |||||||||||| ||||||||||    
T  54054720 aataagggtcctgccaaccggtgcccccggggcactggttaagcatac 54054673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 431
Target Start/End: Complemental strand, 20654774 - 20654674
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccggg---ggcaccggttagcatt 430  Q
    ||||| ||||||||| ||||||||||||||||||  ||   |||||||||| |||||| |||| |||| |  ||||||| |   ||||||||||||||||    
T  20654774 tttattgattaattacacaattttcaatgcaatagctactctataatttccttttttagtatcattaaacggtgccccgaggcaggcaccggttagcatt 20654675  T
Q  431 t 431  Q
    |    
T  20654674 t 20654674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 36395292 - 36395243
Alignment:
Q  240 ttaataagggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    |||||||||||| ||||||| ||||| ||| |||||||| ||||||||||    
T  36395292 ttaataagggtcctgctaactggtgcccccagggcactggttaagcatac 36395243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 16820980 - 16821032
Alignment:
Q  376 ataatttccctttttattatccttaaccaatgccccgggggcaccggttagca 428  Q
    ||||||||| ||| |  ||| |||||||| |||||||||||||||||||||||    
T  16820980 ataatttccttttatggtatgcttaaccagtgccccgggggcaccggttagca 16821032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 25532993 - 25532953
Alignment:
Q  395 tccttaaccaatgccccgggggcaccggttagcattttcct 435  Q
    |||||||||| ||||| |||||||||||||| |||||||||    
T  25532993 tccttaaccagtgccctgggggcaccggttaacattttcct 25532953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 50619091 - 50619123
Alignment:
Q  252 atgctaaccggtgctcccggggcactgattaag 284  Q
    |||||||| ||||||||||||||||||||||||    
T  50619091 atgctaactggtgctcccggggcactgattaag 50619123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 54054626 - 54054551
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| ||| ||  ||||||||||  |||| || ||||||||||  |||||| |||||||||||||||||||    
T  54054626 tttcaatgcattaactattatataatttcttttttcat-atccttaaccggtgcccccggggcaccggttagcattt 54054551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 7e-66; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 247 - 431
Target Start/End: Complemental strand, 29566887 - 29566703
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaat 346  Q
    |||||||||||| |||||||| ||||||| || ||||||||||       ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  29566887 gggtcatgctaatcggtgctctcggggcagtggttaagcatacaaaaaaaggaaattcttatcataaaaagaagttttgttgatttatttatggattaat 29566788  T
Q  347 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  29566787 taaataattttcaatgcaataattaacatataatttccctttttattatccttaacccgtgccccgggggcaccggttagcattt 29566703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 238 - 443
Target Start/End: Original strand, 42655268 - 42655472
Alignment:
Q  238 ttttaataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttattta 337  Q
    |||||||||||||||||||||||||||| ||| |||||| | ||||||||||       |||||||||||| |||||| |||||||||||||||||||||    
T  42655268 ttttaataagggtcatgctaaccggtgc-cccagggcaccggttaagcatacaaaaaaaggaaattcttattataaaatgaagttttgttgacttattta 42655366  T
Q  338 tggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| | ||| |||| ||||||  ||||||||| |||||    
T  42655367 tggattaattaaacaattttcaatgcaataattaacatataatttaccttttcattatccttaacaagtgctccggaggcaccacttagcatttcccttt 42655466  T
Q  438 taataa 443  Q
    ||||||    
T  42655467 taataa 42655472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 243 - 427
Target Start/End: Original strand, 43714184 - 43714367
Alignment:
Q  243 ataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggat 342  Q
    ||||||||||||||||||||||  || ||||||||| ||||||||||         ||||| ||| |||||||||||||||||||||||||||||| |||    
T  43714184 ataagggtcatgctaaccggtgtcccgggggcactggttaagcatacaaaaaaaataaatttttaccataaaaggaagttttgttgacttatttatagat 43714283  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagc 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  43714284 taattaaacaattttcaatgcaataattaacatataatttccctttttattatcc-taaccagtgccccgggggcaccggttagc 43714367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 245 - 431
Target Start/End: Complemental strand, 18955884 - 18955696
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatac--nnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggat 342  Q
    ||||||||||||||||||||| |||||||||  | ||||||||||           ||||||||| ||||||||||||||||||||||||||||||||||    
T  18955884 aagggtcatgctaaccggtgcccccggggcatgggttaagcatacaaaaaaaaaaaaaattcttaccataaaaggaagttttgttgacttatttatggat 18955785  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||    
T  18955784 taattaaacaattttcaatgcaataattaacatataatttccctttttattatcattaaccagtgccacgggggcatcggttagcattt 18955696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 261 - 431
Target Start/End: Original strand, 39751485 - 39751655
Alignment:
Q  261 ggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaa 360  Q
    ||||| |||| ||||||| ||||||||||       ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  39751485 ggtgcccccgaggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatagattaattaaacaatttttaa 39751584  T
Q  361 tgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39751585 tgcaataaataatatataattttcctttttattatccttaaccagtgccccgggggcaccggttagcattt 39751655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 245 - 431
Target Start/End: Complemental strand, 40268110 - 40267924
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggatta 344  Q
    |||||||||| |||| |||||||| ||||||| | |||| |||||       ||||||| |||||||||||||||||||||||||||||||||| |||||    
T  40268110 aagggtcatgttaactggtgctcctggggcacgggttaaacatacaaaaaaaggaaattattatcataaaaggaagttttgttgacttatttatagatta 40268011  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||| ||  |||||||||||    
T  40268010 attaaacaattttcaatgcaataattaacctataatttccctttttattatccttaaccagtgctccggggacattggttagcattt 40267924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 297 - 409
Target Start/End: Complemental strand, 24261502 - 24261390
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 396  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24261502 ggaaattcttatcataaaaggaagttttgttgacttatttatgggttaattaaacaattttcaatgcaataattaacatataatttctctttttattatc 24261403  T
Q  397 cttaaccaatgcc 409  Q
    |||||||| ||||    
T  24261402 cttaaccagtgcc 24261390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 256 - 402
Target Start/End: Complemental strand, 39206363 - 39206217
Alignment:
Q  256 taaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaatt 355  Q
    |||||||||| || ||||||| | ||||||||||       ||||||| |||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  39206363 taaccggtgccccgggggcaccggttaagcatacaaaaaaaggaaatttttatcataaaagaaagttttgttgacttatttatgaattaattaaataatt 39206264  T
Q  356 ttcaatgcaataattaacatataatttccctttttattatccttaac 402  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  39206263 ttcaatacaataattaacatataatttccctttttattatccttaac 39206217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 242 - 388
Target Start/End: Original strand, 2490152 - 2490297
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatgga 341  Q
    |||||||||||||||||||||||| |||| ||||| | ||||||||||       ||||||| ||| ||||||| ||||||||||||||||||||||| |    
T  2490152 aataagggtcatgctaaccggtgcccccgaggcacgggttaagcatacaaaaaaaggaaatttttaccataaaatgaagttttgttgacttatttatgaa 2490251  T
Q  342 ttaattaaacaattttcaatgcaataattaacatataatttcccttt 388  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  2490252 ttaattaaacaattttcaatgcaataattaatatat-atttcccttt 2490297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 312 - 401
Target Start/End: Complemental strand, 37479689 - 37479600
Alignment:
Q  312 aaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaa 401  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  37479689 aaaaggaagttttgttgatttatttatagattaattaaacaattttcaaggcaataattaacatataatttccttttttattatccttaa 37479600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 2270716 - 2270564
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatgga 341  Q
    |||||||||||| |||||||||||  |||| |||||  |||||||||        | |||||||||  ||||||||||||||| |||||||||||||| |    
T  2270716 aataagggtcatactaaccggtgcctccggagcactcgttaagcatataaaaaaagaaaattcttacaataaaaggaagttttattgacttatttatgca 2270617  T
Q  342 ttaattaaacaattttcaatgcaataattaacatataatttccctttttattat 395  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  2270616 ttaattaaacaattttcaatacaataattaacatataa-ttccctttttattat 2270564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 242 - 444
Target Start/End: Complemental strand, 13643202 - 13643002
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatgga 341  Q
    |||||||||| ||||||||||||||||  |||||||| ||||||||||       |  |||| ||| ||||||||||| |||| |||||||  ||||  |    
T  13643202 aataagggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattttttttgactttattataaa 13643103  T
Q  342 ttaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttttaat 441  Q
    ||||||| | ||||| ||||||| ||| ||  ||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| |||    
T  13643102 ttaattacataattt-caatgcattaactactatataatttcc-tttttcgtatccttaaccagtgccccgggggcaccggttagcattttcctttaaat 13643005  T
Q  442 aat 444  Q
    |||    
T  13643004 aat 13643002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 242 - 444
Target Start/End: Complemental strand, 13743627 - 13743427
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatgga 341  Q
    |||||||||| ||||||||||||||||  |||||||| ||||||||||       |  |||| ||| ||||||||||| |||| |||||||  ||||  |    
T  13743627 aataagggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattttttttgactttattataaa 13743528  T
Q  342 ttaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttttaat 441  Q
    ||||||| | ||||| ||||||| ||| ||  ||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| |||    
T  13743527 ttaattacataattt-caatgcattaactactatataatttcc-tttttcgtatccttaaccagtgccccgggggcaccggttagcattttcctttaaat 13743430  T
Q  442 aat 444  Q
    |||    
T  13743429 aat 13743427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 247 - 431
Target Start/End: Complemental strand, 34228868 - 34228685
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  |||||    
T  34228868 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 34228769  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| ||||||| ||||||| ||||||  ||||||||||| |||| || ||||||||||| |||||| |||||||||||||||||||    
T  34228768 ttacacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgcccccggggcaccggttagcattt 34228685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 309 - 437
Target Start/End: Complemental strand, 4811682 - 4811554
Alignment:
Q  309 cataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgc 408  Q
    ||||||| |||  |||||||| ||||||||| |||||||| ||||||||||||||||||||||  ||||||||| | |||||| ||| |||||||  |||    
T  4811682 cataaaaagaaactttgttgatttatttatgaattaattatacaattttcaatgcaataattactatataattttcttttttagtattcttaaccggtgc 4811583  T
Q  409 cccgggggcaccggttagcattttccttt 437  Q
    ||  | ||||||| ||||||||| |||||    
T  4811582 ccttgaggcaccgattagcatttcccttt 4811554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 436
Target Start/End: Original strand, 27988499 - 27988687
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatta 344  Q
    |||||| ||||||||||||| |||||| ||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  ||||    
T  27988499 agggtcctgctaaccggtgcccccggg-cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaatta 27988597  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| |||||||| ||||||||||||||||| ||||    
T  27988598 attacacaattt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 436
Target Start/End: Original strand, 28045801 - 28045989
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatta 344  Q
    |||||| ||||||||||||| |||||| ||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  ||||    
T  28045801 agggtcctgctaaccggtgcccccggg-cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaatta 28045899  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| |||||||| ||||||||||||||||| ||||    
T  28045900 attacacaattt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 22199338 - 22199235
Alignment:
Q  305 ttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 404  Q
    |||| ||||||||||  |||||| ||||||||||| |||||||| | || ||||||||||||| |||  |||||| |||| |||||| || |||||||||    
T  22199338 ttattataaaaggaaactttgttaacttatttatgaattaattacataaatttcaatgcaatagttactatataaattccatttttagtaaccttaacca 22199239  T
Q  405 atgc 408  Q
    ||||    
T  22199238 atgc 22199235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 436
Target Start/End: Original strand, 2490320 - 2490377
Alignment:
Q  379 atttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||    
T  2490320 atttccctttttattatccttaacctgtgccccggaggcaccggttagcatttccctt 2490377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 431
Target Start/End: Original strand, 30675568 - 30675755
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatgg 340  Q
    ||||| |||| ||||||||||||  |||||||||||| ||||||||||       |||| || ||| |||||||||||  | || ||||| |  ||||      
T  30675568 aataaaggtcctgctaaccggtgtccccggggcactggttaagcataccataaaaggaa-ttattaccataaaaggaaactgtttttgacattattataa 30675666  T
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| ||||||||||||||||||||||||||    
T  30675667 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcattt 30675755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 429
Target Start/End: Original strand, 33899108 - 33899190
Alignment:
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcat 429  Q
    |||| |||||||||||| |||||||||  ||||||||||| ||||||| || |||||||| ||||||  ||||||||||||||||    
T  33899108 attacacaattttcaattcaataattattatataatttccttttttatcattcttaaccagtgcccc--gggcaccggttagcat 33899190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 436
Target Start/End: Original strand, 4537741 - 4537932
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| |||||||||||||  | ||||||| | ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  ||    
T  4537741 taagggtcctgctaaccggtgcctctggggcacaggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaat 4537840  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||| | ||||| ||||||| ||| ||  |||||||||||  |||||| ||||||||||| |||||||| ||||||||||||||||| ||||    
T  4537841 taattacataattt-caatgcattaactactatataatttcctattttat-atccttaaccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 431
Target Start/End: Complemental strand, 29235421 - 29235238
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaa-gttttgttgacttatttatggattaa 345  Q
    |||||||||||||||||| ||||||| ||||| |||||||| |       ||||||| |||||||||||||||  | || |||| ||  ||||  |||||    
T  29235421 gggtcatgctaaccggtgttcccgggacactggttaagcatcctataaaaggaaattattatcataaaaggaacctatttttgattttattataaattaa 29235322  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| |||| ||| |||||| ||| ||  ||||||||||  |||||| ||||||||| |||||| |||||  |||||||||||||||    
T  29235321 ttacacaaattt-aatgcattaactactatataatttcttttttta-tatccttaatcaatgctccgggaacaccggttagcattt 29235238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 437
Target Start/End: Complemental strand, 168653 - 168463
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatta 344  Q
    |||||| ||||||||||||| ||||||||| || ||||||||||        | |||| ||| |||||||||||  | || ||||| |  ||||  ||||    
T  168653 agggtcctgctaaccggtgcccccggggcattggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaatta 168554  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| |||||||| ||||||||||||||||| |||||    
T  168553 attacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 431
Target Start/End: Original strand, 16888544 - 16888726
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| ||||||||||||| ||||||||| || ||||||||||       |  |||| ||| |||||||||||  | || |||||||  ||||  |||||    
T  16888544 gggtcctgctaaccggtgcccccggggcattggttaagcataccacaaaagagaattattaccataaaaggaaactgtttttgactttattataaattaa 16888643  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||  ||||| ||||||||||||||||||||    
T  16888644 ttacacaattt-caatgcattaactactatataatttcctttttcat-atccttaacctgtgccc-gggggcaccggttagcattt 16888726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 20831661 - 20831736
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| ||| ||  ||||||||||| |||| || ||||||||||| || |||||||||||||||||||||||    
T  20831661 tttcaatgcattaactactatataatttcctttttcat-atccttaaccagtgtcccgggggcaccggttagcattt 20831736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 33357224 - 33357317
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||| ||||||||||| |||||||||| ||||    
T  33357224 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgctccgggggcaccagttagcatttccctt 33357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 431
Target Start/End: Original strand, 2805267 - 2805443
Alignment:
Q  254 gctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttt-tgttgacttatttatggattaattaaaca 352  Q
    ||||||||||||  ||||||||||| ||||||||||       || |||| ||| |||||||||||  |  | |||||||  |||| | ||||||| |||    
T  2805267 gctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgcttttgactttattataggttaattacaca 2805366  T
Q  353 attttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| || ||||||||||| ||||| |||||    
T  2805367 attt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgtcccgggggcactggttaacattt 2805443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 16394207 - 16394244
Alignment:
Q  394 atccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  16394207 atccttaaccagtgccccgggggcaccggttagcattt 16394244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 438
Target Start/End: Original strand, 29444235 - 29444330
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||||| ||||||| ||||||  ||| ||  ||||||||||| |||| || |||||||| || ||||||||| |||||||||| ||||||||||||    
T  29444235 attaattacacaattt-caatgcgttaactactatataatttcctttttcat-atccttaatcagtgccccgggagcaccggttaacattttcctttt 29444330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 429
Target Start/End: Complemental strand, 32113999 - 32113913
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcat 429  Q
    |||||||||||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||||| | |||| | |||||||||||||    
T  32113999 attaattaaacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccaatactccggagacaccggttagcat 32113913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 428
Target Start/End: Original strand, 168615 - 168646
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagca 428  Q
    ||||||||||||||||||||||||||||||||    
T  168615 cttaaccaatgccccgggggcaccggttagca 168646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 12652707 - 12652633
Alignment:
Q  356 ttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||| || |||||||||||||||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcat-atccttaaccagtgctccaggggcaccggttagcattt 12652633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 428
Target Start/End: Complemental strand, 16394098 - 16394067
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagca 428  Q
    ||||||||||||||||||||||||||||||||    
T  16394098 cttaaccaatgccccgggggcaccggttagca 16394067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 428
Target Start/End: Complemental strand, 16888581 - 16888550
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagca 428  Q
    ||||||||||||||||||||||||||||||||    
T  16888581 cttaaccaatgccccgggggcaccggttagca 16888550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 9063051 - 9063093
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcata 288  Q
    |||||| |||||||||||||| ||||||||||| |||||||||    
T  9063051 agggtcctgctaaccggtgcttccggggcactggttaagcata 9063093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 37373296 - 37373209
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| || || ||||||||||||||||||||    
T  37373296 attaattacacaattt-caatgcattaactattatataatttcctttttcat-atccttaaccagtgtcc-gggggcaccggttagcattt 37373209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 5725596 - 5725648
Alignment:
Q  384 cctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||||||||||| ||||||| | | |||| ||||||||||||||||| ||||    
T  5725596 cctttttattatctttaaccagttcaccggaggcaccggttagcatttccctt 5725648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 429
Target Start/End: Original strand, 18955845 - 18955877
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagcat 429  Q
    ||||||| |||||||||||||||||||||||||    
T  18955845 cttaacccatgccccgggggcaccggttagcat 18955877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 431
Target Start/End: Complemental strand, 23722287 - 23722251
Alignment:
Q  395 tccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| |||||||||||||||||||| |||||    
T  23722287 tccttaaccagtgccccgggggcaccggttaacattt 23722251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 29444317 - 29444289
Alignment:
Q  256 taaccggtgctcccggggcactgattaag 284  Q
    |||||||||||||||||||||||||||||    
T  29444317 taaccggtgctcccggggcactgattaag 29444289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 37713989 - 37714057
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaac 402  Q
    ||||| ||||||||| | ||||||||||||||||| ||  || |||||| | |||||| ||||||||||    
T  37713989 tttatagattaattacataattttcaatgcaataactattatgtaattttcttttttagtatccttaac 37714057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 42449064 - 42449008
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttcccttttt 390  Q
    |||||||||||| || ||||||||||||| ||||| ||  ||||||||||| |||||    
T  42449064 tttatggattaactacacaattttcaatgtaataactactatataatttccattttt 42449008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 4e-64; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 247 - 436
Target Start/End: Complemental strand, 6097523 - 6097334
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaat 346  Q
    |||||||||||||| ||||  ||||||||| | |||||||||        ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6097523 gggtcatgctaaccagtgcctccggggcacgggttaagcatataaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatggattaat 6097424  T
Q  347 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  6097423 taaataattttcaatgcaataattaacatataatttccctttttattatccttaaccagtgccccgggggcatcggttagcatttccctt 6097334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 244 - 431
Target Start/End: Complemental strand, 19434682 - 19434496
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggatt 343  Q
    ||||||||||||| |||||||| |||||| ||||| ||||||||||       | ||||||||| |||||||||||||||||||||||||||||||||||    
T  19434682 taagggtcatgctgaccggtgcccccggg-cactggttaagcatacaaaaaaagaaaattcttaccataaaaggaagttttgttgacttatttatggatt 19434584  T
Q  344 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||||    
T  19434583 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaatcagtgccccggaggcaccggttaacattt 19434496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 246 - 436
Target Start/End: Complemental strand, 20402578 - 20402387
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnn-ggaaattcttatcataaaaggaagttttgttgacttatttatggatta 344  Q
    ||||||||||||||||||||||  |||||| || ||||||||||        |||||||||||  |||||||||||||||||||||||||||||||||||    
T  20402578 agggtcatgctaaccggtgctctgggggcattggttaagcatacaaaaaaaaggaaattcttactataaaaggaagttttgttgacttatttatggatta 20402479  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  20402478 attaaataattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgtcccggggacaccggttagcatttccctt 20402387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 246 - 436
Target Start/End: Original strand, 34556891 - 34557078
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaa 345  Q
    |||||||||||||||||||| ||  |||||||| ||||||||||       ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  34556891 agggtcatgctaaccggtgcccc--gggcactggttaagcatacaaaaaaaggaaattcttaccctaaaagaaagttttgttgacttatttatggattaa 34556988  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  34556989 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgcccc-ggggcaccagttagcatttccctt 34557078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 245 - 435
Target Start/End: Original strand, 30923986 - 30924178
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnn--ggaaattcttatcataaaaggaagttttgttgacttatttatggat 342  Q
    ||||||||||||||| ||||| | |||||||||  ||||||||||         ||||||||||| ||||||||||||||||||||||||||||||| ||    
T  30923986 aagggtcatgctaactggtgccctcggggcactcgttaagcatacaaaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatgaat 30924085  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcct 435  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  30924086 taattaaacaattttcaatgcactaattaacatataatttccctttttattatccttaacccgtgccccgggggcaccggttagcattttcct 30924178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 245 - 421
Target Start/End: Complemental strand, 38128480 - 38128304
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggatta 344  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||       ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  38128480 aagggtcatgctaaccggtgcctccggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatagatta 38128381  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccg 421  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||    
T  38128380 attaaacaattttcaatgcaataattaacatataattttcctttttattatccttaaccggtgtcccgggggcaccg 38128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 297 - 436
Target Start/End: Complemental strand, 32805675 - 32805536
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 396  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32805675 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaatttttaatgcaataattaacatataatttccctttttattatc 32805576  T
Q  397 cttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| |||||||||  ||||||||||||||| ||||    
T  32805575 cttaaccagtgccccgggaacaccggttagcatttccctt 32805536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 297 - 431
Target Start/End: Original strand, 13106364 - 13106498
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttatta-t 395  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  13106364 ggaaattcttaccataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacaaataatttccctttttattatt 13106463  T
Q  396 ccttaaccaatgccccgggggcaccggttagcattt 431  Q
    | ||||||| || |||| ||||||||||||||||||    
T  13106464 ctttaaccagtg-cccgagggcaccggttagcattt 13106498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 318 - 431
Target Start/End: Original strand, 45842844 - 45842956
Alignment:
Q  318 aagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggc 417  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| | |||||||||||| |||||| ||||||  | ||    
T  45842844 aagttttgttgacttatttatgaattaattaaataatttttaatgcaataattaacatataattttcttttttattatccctaaccagtgcccc-agagc 45842942  T
Q  418 accggttagcattt 431  Q
    ||||||||||||||    
T  45842943 accggttagcattt 45842956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 436
Target Start/End: Complemental strand, 34333472 - 34333282
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggatt 343  Q
    |||||||| ||||||||||||| |||||||||| | |||| |||||        | |||| ||| |||||||||||  | | ||||| |  ||||  |||    
T  34333472 taagggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgttttgacattattataaatt 34333373  T
Q  344 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||| ||||||| ||||||| ||||||  ||||||||||| |||| || | ||||||||| |||||||||||||||||||||||||| ||||    
T  34333372 aattacacaattt-caatgcattaattactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccctt 34333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 246 - 431
Target Start/End: Complemental strand, 34606448 - 34606264
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttt-tgttgacttatttatggatta 344  Q
    |||||| |||||||||||||||||||||||| | ||||||||||       || |||| ||| |||||||||||  |  | |||||||  ||||  ||||    
T  34606448 agggtcctgctaaccggtgctcccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgcttttgactttattataaatta 34606349  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||  ||||||| ||||||| ||||||  ||||||||||| |||| || ||||||||||| |||||||| |||||| ||||||||||    
T  34606348 atttcacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgccccggaggcaccagttagcattt 34606264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 18486052 - 18485959
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| |||| || ||||||  ||||||||||| |||| | |||||||||||| |||||||||||||||||||||||||| ||||    
T  18486052 attaattacacaattt-caatacattaattactatataatttcc-ttttcaatatccttaaccagtgccccgggggcaccggttagcatttccctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 438
Target Start/End: Original strand, 29993487 - 29993677
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttt-tgttgacttatttatggattaa 345  Q
    ||||| ||||||||| |||  ||||| ||||| ||||||||||       || |||| ||| ||||||||||| ||  | |||||||  ||||  |||||    
T  29993487 gggtcctgctaaccgatgcctccgggacactggttaagcataccataaaagggaattattaccataaaaggaaattgattttgactttattataaattaa 29993586  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    ||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||  ||||||||||||||| |||||||||| ||||||    
T  29993587 ttacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccggtgccccgggggcacccgttagcatttccctttt 29993677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 451
Target Start/End: Complemental strand, 4628657 - 4628549
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttttaa 440  Q
    |||||||||||||||| ||||| | ||| ||  ||||||||||| |||| || ||||||||||  |||||| |||||| |||||||||||| |||||||     
T  4628657 attaattaaacaattt-caatgtattaactactatataatttcctttttcat-atccttaaccggtgccccaggggcatcggttagcatttcccttttat 4628560  T
Q  441 taatcaccaaa 451  Q
    |||||| ||||    
T  4628559 taatcatcaaa 4628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 431
Target Start/End: Complemental strand, 24438663 - 24438480
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaagg-aagttttgttgacttatttatggattaa 345  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||       || |||| ||| ||||||||| || | || ||||| |  ||||  |||||    
T  24438663 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaa 24438564  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| | || |||||||||| ||| ||  ||||| ||| |||||||  || ||||||| | ||||||||||||||||||||||||||    
T  24438563 ttacataa-tttcaatgcattaactactatatagttt-cctttttcatacccttaactagtgccccgggggcaccggttagcattt 24438480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 12218531 - 12218624
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||    
T  12218531 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atacttatccagtgccccgggggcaccggttagcatttccctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 43594131 - 43594219
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| ||||||||||| ||  |||||| |||||||||||||||    
T  43594131 attaattatacaattt-caatgcattaactattatataatttccttttttat-atccttaaccagtgttccggggacaccggttagcattt 43594219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 404
Target Start/End: Original strand, 34435744 - 34435811
Alignment:
Q  337 atggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 404  Q
    ||||||| |||| |||||||| |||||||||| ||  ||||||||||| |||||| |||||| |||||    
T  34435744 atggattgattacacaatttttaatgcaataactattatataatttccttttttagtatcctgaacca 34435811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 41468719 - 41468774
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttt 389  Q
    |||| |||||||||| ||||||||||||| ||||||||  ||||||||||| ||||    
T  41468719 tttaaggattaattacacaattttcaatgtaataattactatataatttccttttt 41468774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 37631637 - 37631725
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| | |||||| |||||| ||||||  ||||||||||| ||||||| ||||||||||  ||||||||  |||||||||| |||||    
T  37631637 attaattacataatttt-aatgcattaattattatataatttccttttttat-atccttaacccgtgccccggaagcaccggttaacattt 37631725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 47657071 - 47656983
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||||||  ||||||||| | |||| || ||||||||||| |||||| |  ||||||||||||||||    
T  47657071 attaattacacaattt-caatgcattaattactatataattttctttttcat-atccttaaccagtgcccccgaagcaccggttagcattt 47656983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 371
Target Start/End: Original strand, 4088488 - 4088525
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataatta 371  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  4088488 tttatagattaattatacaattttcaatgcaataatta 4088525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 28262090 - 28262030
Alignment:
Q  374 atataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcct 435  Q
    ||||||||||| |||| || ||||||||||  || ||||| |||||||||||||||||||||    
T  28262090 atataatttcctttttcat-atccttaaccggtgacccggaggcaccggttagcattttcct 28262030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 428
Target Start/End: Original strand, 31320381 - 31320414
Alignment:
Q  395 tccttaaccaatgccccgggggcaccggttagca 428  Q
    |||||||||| |||||||||||||||||||||||    
T  31320381 tccttaaccagtgccccgggggcaccggttagca 31320414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 438
Target Start/End: Original strand, 34546409 - 34546504
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||  | || |||||||| |||||||||||| ||||||    
T  34546409 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccggtacctcgggggcatcggttagcatttccctttt 34546504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 428
Target Start/End: Original strand, 35791651 - 35791684
Alignment:
Q  395 tccttaaccaatgccccgggggcaccggttagca 428  Q
    |||||||||| |||||||||||||||||||||||    
T  35791651 tccttaaccagtgccccgggggcaccggttagca 35791684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 40234703 - 40234666
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaag 284  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  40234703 gggtcatgttaaccggtgctcccggggcactggttaag 40234666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 1737159 - 1737123
Alignment:
Q  253 tgctaaccggtgctcccggggcactgattaagcatac 289  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  1737159 tgctaaccggtgcttccggggcactggttaagcatac 1737123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 433
Target Start/End: Original strand, 11686419 - 11686509
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttc 433  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||||| |||||||||||| |  |||||  ||||| ||||||||||||    
T  11686419 attaattacacaattt-caatgcattaactactatataatttcctttttta-tatccttaaccagtatcccggaagcaccagttagcattttc 11686509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 431
Target Start/End: Complemental strand, 30703728 - 30703692
Alignment:
Q  395 tccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| |||||||||||||||||||| |||||    
T  30703728 tccttaaccagtgccccgggggcaccggttaacattt 30703692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 38022579 - 38022647
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaac 402  Q
    ||||| ||||||||| |||||||||||| |||||| ||  ||||||||| | || ||| ||||||||||    
T  38022579 tttatagattaattatacaattttcaatacaataactactatataattttctttattagtatccttaac 38022647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 430
Target Start/End: Complemental strand, 46716697 - 46716642
Alignment:
Q  374 atataatttccctttttattatccttaaccaatgccccgggggcaccggttagcatt 430  Q
    ||||||||||| ||||||| ||| ||||||||||| ||| ||||||| |||||||||    
T  46716697 atataatttccttttttat-atctttaaccaatgctccgagggcaccagttagcatt 46716642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 6e-63; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 233 - 436
Target Start/End: Original strand, 14214036 - 14214238
Alignment:
Q  233 cagtattttaataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgactt 332  Q
    ||||||| | |||||||| |||||||||||||| |||||| ||| | ||||||||||       ||||||||||| ||||||||||||||||||||||||    
T  14214036 cagtattattataagggt-atgctaaccggtgcccccgggacaccggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgactt 14214134  T
Q  333 atttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcatttt 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||| |||||     
T  14214135 atttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaacctgtgcctcgggagcaccggttaacatttc 14214234  T
Q  433 cctt 436  Q
    ||||    
T  14214235 cctt 14214238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 247 - 413
Target Start/End: Complemental strand, 31467906 - 31467740
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaat 346  Q
    ||||| ||||||||||||  || ||||||||| ||||||||||       ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31467906 gggtcttgctaaccggtgtccctggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagttttgttgacttatttatagattaat 31467807  T
Q  347 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgg 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  31467806 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccggtgccccgg 31467740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 299 - 438
Target Start/End: Original strand, 21944912 - 21945051
Alignment:
Q  299 aaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 398  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  21944912 aaatttttaccataaaaggaagttttgttgacttatttatggattaattaaacaatttttaatgcaataattaatatataattttcctttttattatcct 21945011  T
Q  399 taaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||| |||||||| ||||||||||||||||| ||||||    
T  21945012 taaccagtgccccggaggcaccggttagcatttccctttt 21945051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 297 - 431
Target Start/End: Original strand, 40608586 - 40608719
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 396  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40608586 ggaaattcttaccataaaaggaagttttgttgatttatt-atggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 40608684  T
Q  397 cttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| || |||||| ||||||||||||||||    
T  40608685 cttaaccagtgtcccgggagcaccggttagcattt 40608719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 297 - 436
Target Start/End: Complemental strand, 16972313 - 16972174
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 396  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||    
T  16972313 ggaaattattatcataaaaggaagttttgttgacttatttatggattaattaaataatttttaatgcaataattaacatataatttttctttttattatc 16972214  T
Q  397 cttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||| ||||||||| |||||||||||| ||||    
T  16972213 cttaaccagtgctccgggggcatcggttagcatttccctt 16972174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 298 - 431
Target Start/End: Complemental strand, 39234966 - 39234834
Alignment:
Q  298 gaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 397  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39234966 gaaattcttaccataaaaggaagttttgttgatttatttatggattaattaaacaattgtcaatgcaataattaacatataatttccctttttattatcc 39234867  T
Q  398 ttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||  |||||| || ||||||||||||||||    
T  39234866 ttaacccgtgcccc-ggagcaccggttagcattt 39234834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 244 - 431
Target Start/End: Original strand, 1383270 - 1383456
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnn-ggaaattcttatcataaaaggaagttttgttgacttatttatggat 342  Q
    ||||||||||||||||||||||  | ||| ||| | ||||||||||        ||||||||||| |||||||||||||||||||||||| |||||||||    
T  1383270 taagggtcatgctaaccggtgcctctgggacacgggttaagcatacaaaaaaaaggaaattcttaccataaaaggaagttttgttgacttttttatggat 1383369  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||  ||| |||||||||||||||    
T  1383370 taattaaacaattttcaatgcaataattaacatataatttcccttcttattatccttaaccagtaccc--gggacaccggttagcattt 1383456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 249 - 404
Target Start/End: Original strand, 30889432 - 30889587
Alignment:
Q  249 gtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaatta 348  Q
    |||||||||| ||||||  |||||| |||| ||||||||||       ||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  30889432 gtcatgctaatcggtgcctccggggtactggttaagcatacaaaaaaaggaaatttttatcataaaaggaagttttgttgacttatttatagattaatta 30889531  T
Q  349 aacaattttcaatgcaataattaacatataatttccctttttattatccttaacca 404  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30889532 aataattttcaattcaataattaacatataatttccctttttattatccttaacca 30889587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 298 - 431
Target Start/End: Original strand, 32188042 - 32188173
Alignment:
Q  298 gaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 397  Q
    |||||| |||||||||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  32188042 gaaatttttatcataaaag-aagttttgttaacttatttataaattaattaaacaattttcaatgcaataattaacatataatttttctttttattat-c 32188139  T
Q  398 ttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||| |||| ||| |||| ||||||||||||    
T  32188140 ttaaccagtgcctcggaggcatcggttagcattt 32188173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 309 - 401
Target Start/End: Complemental strand, 14349684 - 14349592
Alignment:
Q  309 cataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaa 401  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  14349684 cataaaaagaaattttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttatctttttattatccttaa 14349592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 431
Target Start/End: Original strand, 11957961 - 11958150
Alignment:
Q  241 taataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatg 339  Q
    ||||||||||| ||||||||||||| || ||||||||| |||||||| |       || |||| ||| |||||||||||  | || |||||||  ||||     
T  11957961 taataagggtcctgctaaccggtgcccctggggcactggttaagcatgccataaaagggaattattaccataaaaggaaactgtttttgactttattatc 11958060  T
Q  340 gattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
     |||||||| ||||||| || |||| ||| ||  ||||||||||| ||||||| ||| ||||||  ||||||||||||||||||||||||||    
T  11958061 aattaattacacaattt-cattgcattaactactatataatttccttttttat-atctttaacctgtgccccgggggcaccggttagcattt 11958150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 10054447 - 10054540
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||||||  ||||||||||| |||| || | ||||||||| |||||||||||||||||||||||||| ||||    
T  10054447 attaattacacaattt-caatgcattaattattatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcatttccctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 10070060 - 10069972
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||    
T  10070060 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcattt 10069972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 431
Target Start/End: Original strand, 34650832 - 34651015
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaagg-aagttttgttgacttatttatggatta 344  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||       || |||| ||| ||||||||| || | || ||||| |  ||||  ||||    
T  34650832 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaatta 34650931  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||| |||| |||||||||| ||| ||  ||||||||| |||||||  || ||||||||| || |||||||||||||||||||||||    
T  34650932 attacacaa-tttcaatgcattaactactatataattt-cctttttcatacccttaaccagtg-cccgggggcaccggttagcattt 34651015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 13661899 - 13661805
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| ||| |||||||||||||||||||||| |||||    
T  13661899 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgctccgggggcaccggttagcatttcccttt 13661805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 436
Target Start/End: Complemental strand, 8787527 - 8787337
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatt 343  Q
    ||||||| ||||||||||||| |||||||||| | ||||||||||        | |||| |||||||||||||||  | || ||||  |  ||||  |||    
T  8787527 aagggtcctgctaaccggtgcccccggggcacaggttaagcataccataaaatggaattattatcataaaaggaaactgtttttgatattattataaatt 8787428  T
Q  344 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||  |||| || | |||||||||||||||||||| ||||||||||||||| ||||    
T  8787427 aattacacaattt-caatgcattaactactatataatttcatttttcat-acccttaaccaatgccccggggacaccggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 437
Target Start/End: Complemental strand, 35132709 - 35132519
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggatta 344  Q
    ||||||| ||||||||||||| ||||||||| || ||||||||||       |  |||| ||| ||||||   || | || |||||||  ||||  ||||    
T  35132709 aagggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattaccataaagaaaactgtttttgactttattataaatta 35132610  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttccttt 437  Q
    |||| ||||||| ||||| | ||| ||  ||||||||||| |||| || ||||||||||| || ||||||||||||||||||||||| |||||    
T  35132609 attacacaattt-caatgtattaactactatataatttcctttttcat-atccttaaccagtgtcccgggggcaccggttagcatttcccttt 35132519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 6042135 - 6042183
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataattt 382  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  6042135 tttatggattaattacacaattttcaatgcaataattactatataattt 6042183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 19647753 - 19647846
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| |||||||| |  |||||||||||||||||||    
T  19647753 attaattatacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccccggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 21547489 - 21547576
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| |||||||||| |||||| |||| |||||||||||||||    
T  21547489 attaattacacaattt-caatgcattaactactatataatttccttttttat-atccttaaccgatgccc-ggggacaccggttagcattt 21547576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 35504335 - 35504423
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| || |||||||||||||||||||||||    
T  35504335 attaattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgtcccgggggcaccggttagcattt 35504423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 1069610 - 1069658
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataattt 382  Q
    ||||||||| |||||||||||||||||| |||||||||  |||||||||    
T  1069610 tttatggatcaattaaacaattttcaatacaataattattatataattt 1069658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 5302365 - 5302440
Alignment:
Q  332 tatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatg 407  Q
    ||||||| ||||||||| |||||||||||| |||||| ||  ||||||||||  |||||| |||  ||||||||||    
T  5302365 tatttatagattaattacacaattttcaatacaataactattatataatttctttttttaatatttttaaccaatg 5302440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 428
Target Start/End: Original strand, 35132670 - 35132701
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagca 428  Q
    ||||||||||||||||||||||||||||||||    
T  35132670 cttaaccaatgccccgggggcaccggttagca 35132701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 6283653 - 6283565
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||||||  ||||||||| | |||| || ||| ||||| | |||||||| |||||||||||||||||    
T  6283653 attaattacacaattt-caatgcattaattattatataattttctttttcat-atctttaactagtgccccggaggcaccggttagcattt 6283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 428
Target Start/End: Original strand, 1919620 - 1919653
Alignment:
Q  395 tccttaaccaatgccccgggggcaccggttagca 428  Q
    |||||||||| |||||||||||||||||||||||    
T  1919620 tccttaaccagtgccccgggggcaccggttagca 1919653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 29571619 - 29571571
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataattt 382  Q
    |||||| ||| |||| ||||||||||||||||||| ||| |||||||||    
T  29571619 tttatgaattgattatacaattttcaatgcaataaataatatataattt 29571571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 4e-58; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 247 - 434
Target Start/End: Original strand, 31782565 - 31782752
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaat 346  Q
    ||||||||||||||||||| |||| ||||| | ||||||||||       ||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  31782565 gggtcatgctaaccggtgcccccgaggcacgggttaagcatacaaaaaaaggaaatttttaccataaaaagaagttttgttgacttatttatggattaat 31782664  T
Q  347 taaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcc 434  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||    
T  31782665 taaacaattttcaatgcaataattaatatataatttctctttttattatccttaatccgtgccccggggacaccggttagcattttcc 31782752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 297 - 436
Target Start/End: Original strand, 44854390 - 44854528
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 396  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44854390 ggaaattattaccataaaatgaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataattt-cctttttattatc 44854488  T
Q  397 cttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||||| | |||||||||||||| ||||    
T  44854489 cttaaccagtgccccgggagtaccggttagcatttccctt 44854528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 242 - 431
Target Start/End: Complemental strand, 26270175 - 26269988
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatgga 341  Q
    |||| |||||||||||||||||||  |||||||||   |||||||||         |||||| ||| |||||||||||||||||||||||||||||| ||    
T  26270175 aatatgggtcatgctaaccggtgcctccggggcacctgttaagcatataaaaaaaagaaatttttaccataaaaggaagttttgttgacttatttataga 26270076  T
Q  342 ttaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || |||||||||||||||||||||||    
T  26270075 ttaattaaacaattttcaatgcaataattaacatataatttctctttttattatcc-taaccagtg-cccgggggcaccggttagcattt 26269988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 298 - 431
Target Start/End: Original strand, 5282304 - 5282437
Alignment:
Q  298 gaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 397  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5282304 gaaattcttaccataaaaggaagtttttttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccccttttattatcc 5282403  T
Q  398 ttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||| || || ||||| |||| || |||| ||||    
T  5282404 ttaatcagtgtcccggaggcatcgattagtattt 5282437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 29771539 - 29771419
Alignment:
Q  310 ataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgcc 409  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  29771539 ataaaaggaagttttgttgacttatttatggattaattaat-aattttcaatgtaataattaacatataatttccttttttattatccttaaccagtgcc 29771441  T
Q  410 ccgggggcaccggttagcattt 431  Q
    ||||||||| ||||||||||||    
T  29771440 ccgggggcatcggttagcattt 29771419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 299 - 431
Target Start/End: Original strand, 15135772 - 15135903
Alignment:
Q  299 aaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 398  Q
    ||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15135772 aaattattaccataaaaaaaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcct 15135871  T
Q  399 taaccaatgccccgggggcaccggttagcattt 431  Q
    ||| || | |||||| ||||  |||||||||||    
T  15135872 taa-cagtaccccggaggcattggttagcattt 15135903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 247 - 436
Target Start/End: Complemental strand, 45262096 - 45261901
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggat--ta 344  Q
    ||||||||||||||||||| |||||| ||  | ||||||||||        |||||| ||| |||||||||||||||||||||||||| |||  ||  ||    
T  45262096 gggtcatgctaaccggtgcccccgggacaaaggttaagcatacaaaaaaaagaaattattaccataaaaggaagttttgttgacttatatatttatggta 45261997  T
Q  345 attaaacaattttcaatgcaataattaacata---taatttccctttttattatccttaaccaatgccc-cgggggcaccggttagcattttcctt 436  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||  |||||||||||||||||||| ||||    
T  45261996 attaaacaattttcaatgcaataattaacatataataatttccctttttattatccttaaccagtgccctggggggcaccggttagcatttccctt 45261901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 271 - 425
Target Start/End: Complemental strand, 28178564 - 28178410
Alignment:
Q  271 gggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataatt 370  Q
    |||||||| ||||||||||       ||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28178564 gggcactggttaagcatacaaataaaggaaattctaaccataaaagaaagttttgttgacttatttatggattaattaaacaattttcaatgtaataatt 28178465  T
Q  371 aacatataatttccctttttattatccttaaccaatgccccgggggcaccggtta 425  Q
    || |||||||||  ||||||||||||||||| |  ||||| ||||||||| ||||    
T  28178464 aatatataatttttctttttattatccttaatccgtgccctgggggcaccagtta 28178410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 298 - 431
Target Start/End: Original strand, 28012005 - 28012137
Alignment:
Q  298 gaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatcc 397  Q
    |||||||||||||||||| |||  ||||||||||||||||| ||||||||  |||||||| |||||||||||||  ||||||||| |||||||| |||||    
T  28012005 gaaattcttatcataaaaagaaactttgttgacttatttatagattaattccacaattttgaatgcaataattactatataattttcctttttaatatcc 28012104  T
Q  398 ttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||| |  ||| ||||||||||||| |||||    
T  28012105 ttaaccagtatccc-ggggcaccggttatcattt 28012137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 431
Target Start/End: Complemental strand, 20553122 - 20552934
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatgg 340  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||      
T  20553122 aataagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatca 20553023  T
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||||||  ||||||||||| |||| || ||||||||||| |||||| |||||||||||||||||||    
T  20553022 attaattacacaattt-caatgcattaattactatataatttcctttttcat-atccttaaccagtgcccccggggcaccggttagcattt 20552934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 242 - 431
Target Start/End: Complemental strand, 31438837 - 31438649
Alignment:
Q  242 aataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatgg 340  Q
    |||||||||| ||||||||||||  |||||||||||| ||||||||||       || |||| |||||||||||||||  | || |||||||  ||||      
T  31438837 aataagggtcctgctaaccggtgtccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataa 31438738  T
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||   |||||||||| |||| || ||||||||||| ||||||||| ||||||||||||||||    
T  31438737 attaattacacaattt-caatgcattaactactgtataatttcctttttcat-atccttaaccagtgccccgggagcaccggttagcattt 31438649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 436
Target Start/End: Complemental strand, 30486396 - 30486208
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  |||| | ||||    
T  30486396 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagtttaa 30486297  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||| ||||||| |||| || ||| ||  ||||||||||| |||| || ||||||||||| ||||||||||||||| |||||||||| ||||    
T  30486296 ttacacaattt-caatacattaactactatataatttcctttttcat-atccttaaccagtgccccgggggcaccagttagcatttccctt 30486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 431
Target Start/End: Complemental strand, 44854388 - 44854313
Alignment:
Q  354 ttttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| | | |||||||||||||||||||||||    
T  44854388 ttttcaatgcaataattaatatataattt-cctttttattatccttaacc-aggacccgggggcaccggttagcattt 44854313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 438
Target Start/End: Original strand, 561515 - 561708
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagttt-tgttgacttatttatggat 342  Q
    |||| ||| |||||||||||||  |||||| |||||||||||||||       |  |||| |||| ||||||||||  |  | |||||||  ||||  ||    
T  561515 taagagtcctgctaaccggtgcctccggggtactgattaagcataccataaaagagaattattattataaaaggaaactgattttgactttattataaat 561614  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctttt 438  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||| ||||||    
T  561615 taattacacaattt-caatgcattaactactatataatttcctttttcat-atccttaaccagtgccccgggggcaccggttagcatttccctttt 561708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 431
Target Start/End: Complemental strand, 44331840 - 44331742
Alignment:
Q  333 atttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||||||||| |||| |||||||||||||||||  |||||| |||  |||||| || ||||||| | |||||||||||||||| ||| |||||    
T  44331840 atttatggattaattacacaagtttcaatgcaataattactatataaattctttttttagtaaccttaactagtgccccgggggcaccgattaacattt 44331742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 432
Target Start/End: Complemental strand, 4381984 - 4381797
Alignment:
Q  244 taagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggat 342  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||        | |||| ||| |||||||||||  | || ||||| |  ||||  ||    
T  4381984 taagggtcctgctaaccagtgctcccggggcactggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaat 4381885  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcatttt 432  Q
    |||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || | ||||||||| ||| |||||||||||||||||||||||    
T  4381884 taattacacaattt-caatgcattaactactatataatttcctttttcat-acccttaaccagtgcaccgggggcaccggttagcatttt 4381797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 436
Target Start/End: Original strand, 27856394 - 27856584
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatt 343  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||||       ||||||| ||| |||||||||||  | || ||||| |  ||||  |||    
T  27856394 aagggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaatt 27856493  T
Q  344 aattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||| ||||||| ||||||| ||| ||  ||||||||||| |||| ||  || ||||||| |||||||||||||||||||| ||||| ||||    
T  27856494 aattacacaattt-caatgcattaactattatataatttcctttttcatactc-ttaaccagtgccccgggggcaccggttaacatttccctt 27856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 312 - 407
Target Start/End: Original strand, 3336412 - 3336508
Alignment:
Q  312 aaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataatta--acatataatttccctttttattatccttaaccaatg 407  Q
    |||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||| | ||  ||||||||||| | |||||| | |||||||||||||    
T  3336412 aaaaggaattttttttgactt-tttatggattaattatacaattttcaatgcaattactattacatataattttcttttttagtgtccttaaccaatg 3336508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 16807318 - 16807408
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||| | |||| |  |||||||||||||||| ||| |||||||||||||||||    
T  16807318 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcattt 16807408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 16846599 - 16846689
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||| | |||| |  |||||||||||||||| ||| |||||||||||||||||    
T  16846599 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcattt 16846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 246 - 436
Target Start/End: Original strand, 22068319 - 22068507
Alignment:
Q  246 agggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggatta 344  Q
    |||||| |||||| |||||| |||||||||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  ||||    
T  22068319 agggtcctgctaatcggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatta 22068418  T
Q  345 attaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||| ||||||| ||||||| ||| ||  |||||||| ||||||||  |||||||||||| ||||||||||||||  |||||||||| ||||    
T  22068419 attatacaattt-caatgca-taactactatataatt-ccctttttcatatccttaaccagtgccccgggggcacttgttagcatttccctt 22068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 26891758 - 26891846
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| ||||||| ||||||| ||| ||| ||||||||||| ||||||| |||||||| || || |||||||||||||||||||||||    
T  26891758 attaattacacaattt-caatgcattaactaatatataatttccttttttat-atccttaatcagtgtcccgggggcaccggttagcattt 26891846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 366
Target Start/End: Complemental strand, 44331896 - 44331839
Alignment:
Q  309 cataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaat 366  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||    
T  44331896 cataaaaggaaattttgttgacttatttatgaattaattacacaagtttcaatgcaat 44331839  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 431
Target Start/End: Complemental strand, 44588088 - 44587905
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| ||||||||||| | |||||||||||  ||||||||||       || |||| ||| |||||||||||  | || || ||||  ||||  |||||    
T  44588088 gggtcctgctaaccggtacccccggggcacttgttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaa 44587989  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| ||||||| ||||| | ||| ||  ||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  44587988 ttacacaattt-caatgtattaactactatataatttccttttttat-atccttaaccggtgccccgggggcaccggttagcattt 44587905  T

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Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 431
Target Start/End: Original strand, 32360869 - 32361052
Alignment:
Q  247 gggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatggattaa 345  Q
    ||||| ||||||||||||| ||||||||| || ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||  |||||    
T  32360869 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 32360968  T
Q  346 ttaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||| |  |||| ||||||| ||| ||  ||||||||| | |||| |  ||||||||||| ||||||||||||||||||||||||||    
T  32360969 ttatattattt-caatgcattaactattatataattttctttttcac-atccttaaccagtgccccgggggcaccggttagcattt 32361052  T

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Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 32860193 - 32860100
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| ||||||| ||||||||||  |||||| ||||||||||||| ||||| ||||    
T  32860193 attaattacacaattt-caatgcattaaatactatataatttccttttttat-atccttaacccgtgcccccggggcaccggttaacatttccctt 32860100  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 35851917 - 35851957
Alignment:
Q  396 ccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||||||| |||||||||||||||||||||||||| ||||    
T  35851917 ccttaaccagtgccccgggggcaccggttagcatttccctt 35851957  T

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Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 436
Target Start/End: Complemental strand, 20252877 - 20252738
Alignment:
Q  297 ggaaattcttatcataaaaggaagttttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatc 396  Q
    ||||||| |||||||||||| || | || |||| || |||  | |||||||| ||| ||||||||||||||| ||  ||||||||||| || ||   |||    
T  20252877 ggaaattattatcataaaagaaaatatttttgattttttttagtattaattacacagttttcaatgcaataactacaatataatttcctttcttgacatc 20252778  T
Q  397 cttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
     ||||||| || | ||| |||||| |||||||||| ||||    
T  20252777 tttaaccagtgtcacggaggcaccagttagcatttccctt 20252738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 428
Target Start/End: Complemental strand, 32360906 - 32360875
Alignment:
Q  397 cttaaccaatgccccgggggcaccggttagca 428  Q
    ||||||||||||||||||||||||||||||||    
T  32360906 cttaaccaatgccccgggggcaccggttagca 32360875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Original strand, 30834456 - 30834517
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaac 402  Q
    |||||||| ||| ||||||||||||||| ||  ||||||||||| ||||||  |||||||||    
T  30834456 attaattacacagttttcaatgcaataactattatataatttccttttttagcatccttaac 30834517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 40210306 - 40210229
Alignment:
Q  335 ttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccg 412  Q
    ||||| |||||||| || |||||||||||||||| ||  ||| ||||||| |||||| |||| |||| ||||| ||||    
T  40210306 ttatgaattaattacaccattttcaatgcaataactactataaaatttccttttttaatatctttaagcaatgtcccg 40210229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 1859240 - 1859165
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| ||| ||  ||| ||||||  ||||||| ||||||||||| | ||||||||||||| ||||||||||    
T  1859240 tttcaatgcattaactactatacaatttctttttttat-atccttaaccattaccccgggggcaccagttagcattt 1859165  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 11496020 - 11496056
Alignment:
Q  43 taataatttaagaaaatagaagtgatcaaatgcaact 79  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  11496020 taataatttaagaaaatagaagtgagcaaatgtaact 11496056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 22887828 - 22887753
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||||| ||| ||  ||||||||||  |||| || ||||||||||| |||||||| |||| ||||||||||||    
T  22887828 tttcaatgcattaactactatataatttcttttttcat-atccttaaccactgccccggaggcatcggttagcattt 22887753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 28601154 - 28601110
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||||    
T  28601154 aagggtcctgctaaccggtgctcccagtgcactggttaagcatac 28601110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 31438651 - 31438683
Alignment:
Q  252 atgctaaccggtgctcccggggcactgattaag 284  Q
    ||||||||||||||||||||||||||| |||||    
T  31438651 atgctaaccggtgctcccggggcactggttaag 31438683  T

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Target: scaffold0001 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 245 - 431
Target Start/End: Original strand, 508985 - 509172
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnn--ggaaattcttatcataaaaggaagttttgttgacttatttatggat 342  Q
    |||||||||||||||||||||  ||||||||| | ||||||||||         ||||||| ||| |||||||| |||||||||||||||||||||| ||    
T  508985 aagggtcatgctaaccggtgcctccggggcaccgtttaagcatacaaaaaaaaaggaaatttttaccataaaagaaagttttgttgacttatttatgaat 509084  T
Q  343 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||   ||||||||||||||||||||||    
T  509085 taattaaacaattttcaattcaataattaacatataatttccatttttattatccttaactaat-atccgggggcaccggttagcattt 509172  T

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Target: scaffold0264 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 23052 - 22959
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||| | ||||||  ||||||||||| |||| || ||||||||||| ||| |||||||||||||||||||||| ||||    
T  23052 attaattacacaattt-caatgtattaattactatataatttcctttttcat-atccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

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Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 116295 - 116202
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||| ||||||| ||||||| ||| ||  ||||||||||| |||| || ||| ||||||  |||||||||||||||||||||||||||||||    
T  116295 attaattacacaattt-caatgcattaactactatataatttcctttttcat-atctttaacctgtgccccgggggcaccggttagcattttcctt 116202  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 53780 - 53868
Alignment:
Q  341 attaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
    |||||||| |||||||| |||||| ||| ||  ||||||||||| |||| || | ||||||||| ||||||||||||||||||||||||||    
T  53780 attaattacacaatttt-aatgcattaactactatataatttcctttttcat-acccttaaccagtgccccgggggcaccggttagcattt 53868  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 95692 - 95772
Alignment:
Q  355 tttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    ||||||| || ||||||  ||||||||||| |||| || || |||||||| | || ||||||||||||||||||||||||||    
T  95692 tttcaattcattaattattatataatttcctttttcat-attcttaaccagtacctcgggggcaccggttagcattttcctt 95772  T

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Target: scaffold0188 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 440
Target Start/End: Original strand, 6246 - 6302
Alignment:
Q  384 cctttttattatccttaaccaatgccccgggggcaccggttagcattttccttttaa 440  Q
    |||||||  |||||||||||| |||||| ||||||||||||||||||| | ||||||    
T  6246 cctttttcatatccttaaccagtgccccaggggcaccggttagcatttcctttttaa 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 66498 - 66430
Alignment:
Q  334 tttatggattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaac 402  Q
    ||||||||||||||| ||||||||||||||||||| ||  |||||| |||  |||||  ||||||||||    
T  66498 tttatggattaattacacaattttcaatgcaataactattatataacttcattttttcgtatccttaac 66430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Original strand, 68435 - 68478
Alignment:
Q  393 tatccttaaccaatgccccgggggcaccggttagcattttcctt 436  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||    
T  68435 tatccttaaccagtgccccgggggcaccagttagcatttccctt 68478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 431
Target Start/End: Complemental strand, 15088 - 14899
Alignment:
Q  241 taataagggtcatgctaaccggtgctcccggggcactgattaagcatacnnnnnnnggaaattcttatcataaaaggaagtt-ttgttgacttatttatg 339  Q
    ||||| ||||| || ||||| ||||  ||||||||||| ||||||||||       || |||| ||| |||||||||||  | || |||||||  ||||     
T  15088 taatatgggtcctgttaaccagtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattata 14989  T
Q  340 gattaattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccgggggcaccggttagcattt 431  Q
     ||||| || ||||||| || |||| ||| ||  ||||||||||  ||||||| ||| ||||||| |||||||||| |||||||||||||||    
T  14988 aattaactacacaattt-cagtgcattaactactatataatttctttttttat-atctttaaccagtgccccggggacaccggttagcattt 14899  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 69413 - 69369
Alignment:
Q  245 aagggtcatgctaaccggtgctcccggggcactgattaagcatac 289  Q
    ||||||| | |||||||||||||||| ||||||| ||||||||||    
T  69413 aagggtccttctaaccggtgctcccgaggcactggttaagcatac 69369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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