View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16512_low_22 (Length: 241)
Name: NF16512_low_22
Description: NF16512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16512_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 13367875 - 13367665
Alignment:
| Q |
19 |
accatcttcaccatatcatcctatgatagcacaacatggtgcaccgagagtagtgttactttgtccacctgggtcaccatgggagacacaaccttatgaa |
118 |
Q |
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| T |
13367875 |
accatcttcaccatatcatcctatgatagcacaacatggtgcaccaagagtagtgttactttgtccacctgggtcaccatgggagacacaaccttatgaa |
13367776 |
T |
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| Q |
119 |
gagggtcctaatgaggttcattttgatccagccacatccagaaataatggagcttccatgcaagtagacaataatattattgatggtgatgttgatctta |
218 |
Q |
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||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13367775 |
gagggtcctaatgaggttcattttgatgcagctacatccagaaataatggggcttccatgcaagtagacaataatattattgatggtgatgttgatctta |
13367676 |
T |
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| Q |
219 |
atttgagccta |
229 |
Q |
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||||||||||| |
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| T |
13367675 |
atttgagccta |
13367665 |
T |
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