View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16513_high_8 (Length: 432)

Name: NF16513_high_8
Description: NF16513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16513_high_8
NF16513_high_8
[»] chr4 (41 HSPs)
chr4 (16-422)||(27570124-27570530)
chr4 (77-422)||(27420122-27420473)
chr4 (16-377)||(27412333-27412690)
chr4 (83-422)||(27425540-27425877)
chr4 (81-406)||(27566042-27566365)
chr4 (16-422)||(27422880-27423287)
chr4 (77-417)||(27415341-27415681)
chr4 (77-408)||(27563435-27563763)
chr4 (249-415)||(27444876-27445033)
chr4 (341-417)||(27506682-27506758)
chr4 (316-417)||(27486942-27487043)
chr4 (253-422)||(27557394-27557554)
chr4 (316-408)||(27526201-27526293)
chr4 (122-173)||(27516917-27516968)
chr4 (316-408)||(27513865-27513957)
chr4 (321-373)||(27554273-27554325)
chr4 (313-417)||(27585644-27585748)
chr4 (122-173)||(27466595-27466646)
chr4 (316-405)||(27469419-27469508)
chr4 (316-417)||(27501276-27501377)
chr4 (316-408)||(27476646-27476738)
chr4 (122-173)||(27473668-27473719)
chr4 (122-184)||(27557266-27557329)
chr4 (323-417)||(27497402-27497496)
chr4 (316-422)||(27523478-27523584)
chr4 (250-295)||(27498326-27498371)
chr4 (341-417)||(27478963-27479039)
chr4 (341-417)||(27486023-27486099)
chr4 (321-373)||(27498379-27498431)
chr4 (316-408)||(27505791-27505883)
chr4 (341-417)||(27527145-27527221)
chr4 (343-422)||(27468402-27468481)
chr4 (316-415)||(27500420-27500519)
chr4 (336-422)||(27431223-27431309)
chr4 (123-172)||(27431468-27431518)
chr4 (122-164)||(27445116-27445158)
chr4 (250-295)||(27501228-27501273)
chr4 (250-295)||(27516793-27516838)
chr4 (336-396)||(17970278-17970338)
chr4 (316-408)||(27479860-27479952)
chr4 (122-165)||(27508119-27508163)
[»] chr5 (3 HSPs)
chr5 (335-417)||(1756837-1756919)
chr5 (340-408)||(1754330-1754398)
chr5 (341-408)||(1754672-1754739)
[»] chr3 (6 HSPs)
chr3 (323-408)||(38024964-38025049)
chr3 (323-408)||(38031416-38031501)
chr3 (323-372)||(50911994-50912043)
chr3 (323-396)||(55084752-55084825)
chr3 (336-422)||(50909939-50910025)
chr3 (336-372)||(50904917-50904953)
[»] chr8 (1 HSPs)
chr8 (323-408)||(21607385-21607470)
[»] chr2 (1 HSPs)
chr2 (336-396)||(3073548-3073608)


Alignment Details
Target: chr4 (Bit Score: 375; Significance: 0; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 16 - 422
Target Start/End: Complemental strand, 27570530 - 27570124
Alignment:
Q  16 gctcttgtctccatgtagatgctatgactccatcctaatcctatactacagtatatccctccaccaatcattcaagtagccaatggtttctcaattattc 115  Q
    |||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27570530 gctcttgtctccttgtagattccatgactccatcctgatcctatactacagtatatacctccaccaatcattcaagtagccaatggtttctcaattattc 27570431  T
Q  116 ttttaactatatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27570430 ttttaactatatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaa 27570331  T
Q  216 gtttttatttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccg 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  27570330 gtttttatttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtccccctggtatcatcagaagggcatctttttctggaaaccg 27570231  T
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27570230 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa 27570131  T
Q  416 ccttcat 422  Q
    |||||||    
T  27570130 ccttcat 27570124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 77 - 422
Target Start/End: Original strand, 27420122 - 27420473
Alignment:
Q  77 caccaatcattcaagtagccaatggtttctcaa--tta-ttcttttaactatatatattcatgactgcaagcatttagaaccaacacaaatcattcacat 173  Q
    |||||||||||||||||| |||  |||||||||  ||| |||||  | ||||||||||||| | || ||||||||||| ||||||||||| |||||||||    
T  27420122 caccaatcattcaagtaggcaactgtttctcaaaattagttcttacatctatatatattcaaggctacaagcatttaggaccaacacaaaacattcacat 27420221  T
Q  174 cctaaagcattcaaatctgaaaaacttggttattgcttaaaagttt---ttatttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttt 270  Q
    ||||||||||||| || | |||||||||||  ||||||||||||||   ||||||  ||||||||| |||| |||| ||||||||||||| |||||||||    
T  27420222 cctaaagcattcagatttcaaaaacttggtctttgcttaaaagtttattttatttttaaaccatttcttctaaagttttaacacatacaacaatgggttt 27420321  T
Q  271 tcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttgga 370  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  27420322 tcgtttccctggtatcatcagaaaggcatcattttctgcaaaccgatcagcttcaaaatctgtggacgtgccaaagggatatcttgcagtatatgttgga 27420421  T
Q  371 gagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat 422  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||||    
T  27420422 gagaaacagacgcggtatttaatccccgtatcatacttgagccaaccttcat 27420473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 16 - 377
Target Start/End: Original strand, 27412333 - 27412690
Alignment:
Q  16 gctcttgtctccatgtagatgctatgactccatcctaatcctatactacagtatatccctccaccaatcattcaagtagccaatggtttctcaattattc 115  Q
    |||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  27412333 gctcttgtctccttgtagattccatgactccatcctgatcctatactacagtataaacctccaccaatcattcaagtagccaatggtttctcaa-tattc 27412431  T
Q  116 ttttaactatatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaa 215  Q
    ||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| ||||  ||| | ||||||||| || ||||||| ||    
T  27412432 ttttatctatatatattcatggctgcaagcatttaggacaaacacaaatcattcacatcctaaaccattttaatttcaaaaacttgcttcttgcttacaa 27412531  T
Q  216 gtttttatttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccg 315  Q
    || ||  |   | ||||||||    | ||||  ||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| ||||||    
T  27412532 gtcttcct---acaaccatttgaatttaagttctaacacatacaaaaatgggttttcgtttctctggtatcatcagaagggcatcattttctgcaaaccg 27412628  T
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaac 377  Q
    | ||| |||||||||||| ||  |||||||||||||| |||| || ||||||||||||||||    
T  27412629 agcagtttcaaaagctgttgacatgccaaagggatatattgccgtgtatgttggagagaaac 27412690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 83 - 422
Target Start/End: Original strand, 27425540 - 27425877
Alignment:
Q  83 tcattcaagtagccaatggtttctcaattattcttttaactatatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagca 182  Q
    ||||||||||||||||  |||| || || ||||| ||| ||||||||||| | | || ||||||||||| ||||||||||||||||||||||||||| ||    
T  27425540 tcattcaagtagccaacagtttttccat-attctcttatctatatatattaaaggctacaagcatttaggaccaacacaaatcattcacatcctaaacca 27425638  T
Q  183 ttcaaatctgaaaaacttggttattgcttaaaagtttttatttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctgg 282  Q
    ||| ||| | ||||||||| || ||||||| | || ||| |||||||   | | |||||||||| ||||||||||||| |||||||||||||||  ||||    
T  27425639 ttccaatttcaaaaacttgcttcttgcttacaggtctttttttaaaactgaat-attctcaagttttaacacatacaacaatgggttttcgttttgctgg 27425737  T
Q  283 tatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacg 382  Q
    ||||||||||| || ||| ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |    
T  27425738 tatcatcagaaaggcatcattttctgcaaaccgatcagcttcgaaagctgtggacgtgccaaagggatatcttgcagtatatgttggagagaaacaaaag 27425837  T
Q  383 cggtatgtgatccccgtatcatacttaagccaaccttcat 422  Q
    ||||||||||||||  |||||||||| | |||||| ||||    
T  27425838 cggtatgtgatcccaatatcatacttgaaccaaccatcat 27425877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 81 - 406
Target Start/End: Complemental strand, 27566365 - 27566042
Alignment:
Q  81 aatcattcaagtagccaatggtttctcaattattcttttaactatatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaag 180  Q
    ||||||||||||||||||  |||| ||||| ||||||||| |||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||     
T  27566365 aatcattcaagtagccaacagtttttcaat-attcttttatctatatatattcatggttacaagcatttaggaccaacacaaatcattcacatcctaaac 27566267  T
Q  181 cattcaaatctg-aaaaacttggttattgcttaaaagtttttatttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccc 279  Q
    ||||| ||| |  ||||||||| || ||||||| |||| ||| ||  ||||||| || ||||||||| | ||| ||||||  ||||||||||||||||||    
T  27566266 cattccaatttccaaaaacttgcttcttgcttacaagtctttttt--aaaaccaatttttctcaagtttgaacgcatacagcaatgggttttcgtttccc 27566169  T
Q  280 tggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacag 379  Q
    | |||| |||| ||||| ||| |||  |||||||||| ||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||     
T  27566168 tagtattatcaaaagggcatcatttgttggaaaccgagcagtttcaaaagttgtggacgtgccaaagggatatcttgcagtgtatgttggagagaaacaa 27566069  T
Q  380 acgcggtatgtgatccccgtatcatac 406  Q
    | ||| | |||||||||| ||||||||    
T  27566068 aagcgatttgtgatccccatatcatac 27566042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 422
Target Start/End: Original strand, 27422880 - 27423287
Alignment:
Q  16 gctcttgtctccatgtagatgctatgactccatcctaatcctatactacagtatatccctccaccaatcattcaagtagccaatggtttctcaattattc 115  Q
    |||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||  ||||    
T  27422880 gctcttgtctccttgtagattccatgactccatcctgatcctatactacagtatatacttccactaataattcaagtagccaatggtttctcaaa-attc 27422978  T
Q  116 ttttaactatatatattc-at-gactgcaagcatttagaaccaacacaaatcattcacatcctaaag-cattca-aatctgaaaaacttggttattgctt 211  Q
    ||||| ||||||| |||  || |  |  || |||||||||||||| | ||||||||||||||||||  ||||   ||| |||||||||||| ||||||||    
T  27422979 ttttatctatataaattttataggttagaaccatttagaaccaactctaatcattcacatcctaaaaacatttgcaatttgaaaaacttggctattgctt 27423078  T
Q  212 aaaagtttttatttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaa 311  Q
      || |||||  |  ||||||| || |||| |  | ||||||||||||| ||||||| | |||||| ||||||| ||||||||||  || ||||||| ||    
T  27423079 ttaatttttttct--aaaaccacttcttctaactttttaacacatacaacaatgggtatccgtttctctggtattatcagaagggcctcattttctgcaa 27423176  T
Q  312 accgatcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaag 411  Q
    ||||| ||   |||||||||| |||  |||||||| |||||||||| |||||||||||| |||||||||| ||| ||||||||| | |||||||||| |     
T  27423177 accgagcaatatcaaaagctgcggacatgccaaagagatatcttgctgtatatgttggatagaaacagacacggcatgtgatccgcatatcatacttgaa 27423276  T
Q  412 ccaaccttcat 422  Q
    |||||||||||    
T  27423277 ccaaccttcat 27423287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 77 - 417
Target Start/End: Original strand, 27415341 - 27415681
Alignment:
Q  77 caccaatcattcaagtagccaatggtttctcaatt---attcttttaactatatatattcatgactgcaagcatttagaaccaacacaaatcattcacat 173  Q
    ||||||||||||||||||||||  ||||||||||    ||||||| | |||| |||||||| | || ||||||||||| ||||||||||| |||||||||    
T  27415341 caccaatcattcaagtagccaactgtttctcaatatgaattctttcatctatttatattcaaggctacaagcatttaggaccaacacaaaacattcacat 27415440  T
Q  174 cctaaagcattcaaatctgaaaaacttggttattgcttaaaagttt-ttatttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttc 272  Q
    |||||||||||||  | | ||||||||| ||||||||  ||  | | |||||| ||||| |||| ||||||||| ||||||||||||| |||||||||||    
T  27415441 cctaaagcattcagttttcaaaaacttg-ttattgctacaatttatcttattttaaaacaatttcttctcaagttttaacacatacaacaatgggttttc 27415539  T
Q  273 gtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggaga 372  Q
    || ||||| |||||||||||| |  ||| ||||||| || ||||  |  |||||||| |||||||||||||||||||||||||||||| |||||||||      
T  27415540 gtgtccctagtatcatcagaaagtcatcattttctgcaagccgagtaatttcaaaagttgtggatgtgccaaagggatatcttgcagtgtatgttgga-- 27415637  T
Q  373 gaaacagacgcggtatgtgatccccgtatcatacttaagccaacc 417  Q
     ||||| | ||| | |||||||||| |||||||||| | ||||||    
T  27415638 -aaacaaaagcgatttgtgatccccatatcatacttgaaccaacc 27415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 77 - 408
Target Start/End: Complemental strand, 27563763 - 27563435
Alignment:
Q  77 caccaatcattcaagtagccaatggtttctcaattattcttttaactatatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcct 176  Q
    ||||||||||||||||||||||| ||||  |||| ||||||||| |||||||||||||||  |||||         ||||||   |||||||||||||||    
T  27563763 caccaatcattcaagtagccaatagttttgcaat-attcttttatctatatatattcatggttgcaat--------accaact--aatcattcacatcct 27563675  T
Q  177 aaagcattcaaatctgaaaaacttggttattgcttaaaagtt---------tttatttaaaaaccatttattctcaagtgttaacacatacaaaaatggg 267  Q
    ||||||||||||| | ||||||||||||||||||||||||||         ||| ||||||||    || ||||||||| ||||||||  ||  ||||||    
T  27563674 aaagcattcaaatttcaaaaacttggttattgcttaaaagtttttttgttctttttttaaaaa----ttcttctcaagttttaacacactcagcaatggg 27563579  T
Q  268 ttttcgtttccctggtatcatcagaagg---gaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatat 364  Q
    ||||||||| ||||||||||| ||||||     ||| ||| ||  || |||||||| | |||||| |||||| ||||||||||| ||||||||||| ||     
T  27563578 ttttcgtttacctggtatcattagaaggtcatcatcgtttacttcaagccgatcagttacaaaagttgtggacgtgccaaagggctatcttgcagtgtac 27563479  T
Q  365 gttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||||||| ||||| | | |   |||||||||||||||||||||    
T  27563478 gttggagataaacaaaagagaattgtgatccccgtatcatactt 27563435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 415
Target Start/End: Complemental strand, 27445033 - 27444876
Alignment:
Q  249 taacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaaggg 348  Q
    |||||||||||| |||||||||||||||  | ||||||||||||||||         ||| ||||| | || |||||||||  |||||||||||||||||    
T  27445033 taacacatacaagaatgggttttcgtttaaccggtatcatcagaaggg---------ctgcaaaccaaacatcttcaaaaggcgtggatgtgccaaaggg 27444943  T
Q  349 atatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa 415  Q
    ||||||||||||||| ||||||||| ||  || | ||| |||||||||  |||||||||| ||||||    
T  27444942 atatcttgcagtatacgttggagaggaaatgaagaggtttgtgatcccaatatcatacttgagccaa 27444876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 27506682 - 27506758
Alignment:
Q  341 ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaacc 417  Q
    |||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||    
T  27506682 ccaaagggctatgttgcagtatatgtcggagagaaacagacgcggtttgtgatcccaatatcatacttaaaccaacc 27506758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 417
Target Start/End: Original strand, 27486942 - 27487043
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa 415  Q
    |||| |||||||||||||||| || |||||||||||||| ||||| || || |||||||||  || ||||| |||||||||  |||||||||||| ||||    
T  27486942 atcatcttcaaaagctgtggacgttccaaagggatatctagcagtgtacgtaggagagaaaatgaagcggtttgtgatccctttatcatacttaaaccaa 27487041  T
Q  416 cc 417  Q
    ||    
T  27487042 cc 27487043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 422
Target Start/End: Original strand, 27557394 - 27557554
Alignment:
Q  253 acatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaagggatat 352  Q
    ||||| || ||||||||||||||| |||| |||||||||||||| |||         ||||| | || ||||||| | |||||||||||||| |||||||    
T  27557394 acatataagaatgggttttcgtttacctgttatcatcagaagggcatc---------aaaccaagcatcttcaaagggtgtggatgtgccaaggggatat 27557484  T
Q  353 cttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat 422  Q
    ||||| ||||||||||||||| ||  || | ||| |||||||||  | |||||||||| |||||| ||||    
T  27557485 cttgccgtatatgttggagaggaaatgaagaggtttgtgatcccaatgtcatacttaaaccaaccatcat 27557554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 408
Target Start/End: Complemental strand, 27526293 - 27526201
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||| ||||||||| ||| ||||| |||||||||||||| ||||| |||||||||||||||  || ||||| |||||| || |||||||||||    
T  27526293 atcatcttcaaaaggtgtcgatgttccaaagggatatctagcagtgtatgttggagagaaaatgaagcggtttgtgattcctgtatcatactt 27526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 27516968 - 27516917
Alignment:
Q  122 ctatatatattcatgactgcaagcatttagaaccaacacaaatcattcacat 173  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  27516968 ctatatatattcatggctgcaagcatttagcaccaacacaaatcattcacat 27516917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 408
Target Start/End: Complemental strand, 27513957 - 27513865
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||| ||||||||||||| || |||||||| |||||||| ||||| ||||| |||||||||  || ||||| |||||||||  ||||||||||    
T  27513957 atcatcttcaaaagctgttgacgtgccaaaaggatatctagcagtgtatgtaggagagaaaatgaagcggtttgtgatcccaatatcatactt 27513865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 27554273 - 27554325
Alignment:
Q  321 cttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagag 373  Q
    |||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  27554273 cttcaaaaggagtggatgtgccaaagggataccttgcagtatatgttggagag 27554325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 417
Target Start/End: Original strand, 27585644 - 27585748
Alignment:
Q  313 ccgatcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagc 412  Q
    |||||||| |||||||| |||||| ||||||||||||||||| ||||| |  ||||| || ||||| | | | | ||||||||||||||||||||| | |    
T  27585644 ccgatcagtttcaaaagttgtggacgtgccaaagggatatctcgcagtgtgcgttggtgataaacaaaagagatttgtgatccccgtatcatacttgaac 27585743  T
Q  413 caacc 417  Q
    |||||    
T  27585744 caacc 27585748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 27466595 - 27466646
Alignment:
Q  122 ctatatatattcatgactgcaagcatttagaaccaacacaaatcattcacat 173  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  27466595 ctatatatattcatggctgcaagcctttagcaccaacacaaatcattcacat 27466646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 405
Target Start/End: Original strand, 27469419 - 27469508
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcata 405  Q
    |||| |||||||||||||||| || |||||||||||||| ||||| || || |||||||||  || ||||| |||||||||  |||||||    
T  27469419 atcatcttcaaaagctgtggacgttccaaagggatatctagcagtgtacgtaggagagaaaatgaagcggtttgtgatccctatatcata 27469508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 417
Target Start/End: Original strand, 27501276 - 27501377
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa 415  Q
    |||| ||||||||| ||| || || |||||||||| ||| |||||||||||||||||| ||  ||  |||| |||||||||  |||||||||||| ||||    
T  27501276 atcatcttcaaaaggtgtcgaggttccaaagggatgtctagcagtatatgttggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaa 27501375  T
Q  416 cc 417  Q
    ||    
T  27501376 cc 27501377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 408
Target Start/End: Original strand, 27476646 - 27476738
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||| |||||||| | ||||| || |||||||||||||| ||||| |||||||| ||||||  || ||||| |||||| || |||||||||||    
T  27476646 atcatcttcaaaaaccgtggacgttccaaagggatatctagcagtgtatgttggtgagaaaatgaagcggtttgtgattcctgtatcatactt 27476738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 27473668 - 27473719
Alignment:
Q  122 ctatatatattcatgactgcaagcatttagaaccaacacaaatcattcacat 173  Q
    ||||||||||||||| |||||||| ||||| | |||||||||||||||||||    
T  27473668 ctatatatattcatggctgcaagcctttagcatcaacacaaatcattcacat 27473719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 27557266 - 27557329
Alignment:
Q  122 ctatatatattcatgactgcaagcatttagaaccaacac-aaatcattcacatcctaaagcatt 184  Q
    ||||||||||||||   ||||||||||||| |||||||| |||||||||||| |||||||||||    
T  27557266 ctatatatattcatagttgcaagcatttaggaccaacacaaaatcattcacaacctaaagcatt 27557329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 27497496 - 27497402
Alignment:
Q  323 tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaacc 417  Q
    |||||| |||| || || |||||||| ||| ||||||| ||||||||||| ||||| | ||||| |||||||||  | |||||||||| ||||||    
T  27497496 tcaaaatctgtagaagttccaaagggctatgttgcagtgtatgttggagataaacaaaagcggtttgtgatccctatctcatacttaaaccaacc 27497402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 422
Target Start/End: Complemental strand, 27523584 - 27523478
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa 415  Q
    |||| |||||||||||||||| || |||||||| ||||| ||||| || || |||||||||  || ||||| |||||| || |||||||| || | ||||    
T  27523584 atcatcttcaaaagctgtggacgttccaaagggctatctagcagtgtacgtaggagagaaaatgaagcggtttgtgattcctgtatcatatttgaaccaa 27523485  T
Q  416 ccttcat 422  Q
     ||||||    
T  27523484 acttcat 27523478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 27498326 - 27498371
Alignment:
Q  250 aacacatacaaaaatgggttttcgtttccctggtatcatcagaagg 295  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||    
T  27498326 aacacatacgaaaatgggttttcgtttaccaggtatcatcagaagg 27498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 417
Target Start/End: Complemental strand, 27479039 - 27478963
Alignment:
Q  341 ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaacc 417  Q
    |||||||| ||| ||||||| ||||||||||||||||||| ||||| |||  ||||  |||||||||| | ||||||    
T  27479039 ccaaagggctatgttgcagtgtatgttggagagaaacagaagcggtttgttgtcccaatatcatacttgaaccaacc 27478963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 417
Target Start/End: Complemental strand, 27486099 - 27486023
Alignment:
Q  341 ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaacc 417  Q
    |||||||| ||| ||||||| ||||||||||||||||||| ||||| |||  ||||  |||||||||| | ||||||    
T  27486099 ccaaagggctatgttgcagtgtatgttggagagaaacagaagcggtttgttgtcccaatatcatacttgaaccaacc 27486023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 27498379 - 27498431
Alignment:
Q  321 cttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagag 373  Q
    |||||||||  |||||  |||||||||||||||| ||||||||||||||||||    
T  27498379 cttcaaaaggcgtggacatgccaaagggatatctagcagtatatgttggagag 27498431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 408
Target Start/End: Complemental strand, 27505883 - 27505791
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||| ||||||||| | |||| ||||||||||| ||||| ||||| || || |||||||||  || ||||| |||||| || |||||||||||    
T  27505883 atcatcttcaaaaggtttggaggtgccaaaggggtatctagcagtgtacgtaggagagaaaatgaagcggtttgtgattcctgtatcatactt 27505791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 27527145 - 27527221
Alignment:
Q  341 ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaacc 417  Q
    |||||||| |||||||| || ||||||||||| |||||||  |||| |||||||||  ||||| |||||| ||||||    
T  27527145 ccaaagggctatcttgcggtgtatgttggagataaacagaaacggtttgtgatcccaatatcacacttaaaccaacc 27527221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 27468481 - 27468402
Alignment:
Q  343 aaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat 422  Q
    |||||| ||| |||| || |||||||||||||||| |  ||||| |||  |||| ||||||||||||| |||||||||||    
T  27468481 aaagggctatgttgcggtgtatgttggagagaaactggtgcggtttgtagtccctgtatcatacttaaaccaaccttcat 27468402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 415
Target Start/End: Complemental strand, 27500519 - 27500420
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa 415  Q
    |||| |||||||| ||||||| || ||||| |||||||| ||||| || || |||||||||  || ||| | |||||||||  |||||||||||| ||||    
T  27500519 atcatcttcaaaatctgtggacgtaccaaaaggatatctagcagtgtacgtaggagagaaaatgaagcgatttgtgatccctatatcatacttaaaccaa 27500420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 422
Target Start/End: Complemental strand, 27431309 - 27431223
Alignment:
Q  336 atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat 422  Q
    ||||||||||||||||| |||||||||||||||| ||  ||  || | ||| |||||||||  |||||||||| | |||||| ||||    
T  27431309 atgtgccaaagggatatattgcagtatatgttggggatgaaatgaagaggtttgtgatcccaatatcatacttgaaccaaccgtcat 27431223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 27431518 - 27431468
Alignment:
Q  123 tatatatattcatgactgcaagcatttagaaccaacacaa-atcattcaca 172  Q
    |||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  27431518 tatatatattcatggctgcaagcttttataaccaacacaatatcattcaca 27431468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 27445158 - 27445116
Alignment:
Q  122 ctatatatattcatgactgcaagcatttagaaccaacacaaat 164  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||    
T  27445158 ctatatatattaatgactgcaagcattaagaaccaactcaaat 27445116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 27501228 - 27501273
Alignment:
Q  250 aacacatacaaaaatgggttttcgtttccctggtatcatcagaagg 295  Q
    ||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  27501228 aacacatacaagaatgggttttcgtttacctggtatcctaagaagg 27501273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 27516838 - 27516793
Alignment:
Q  250 aacacatacaaaaatgggttttcgtttccctggtatcatcagaagg 295  Q
    ||||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  27516838 aacacatacaacaatgggttttcgtttacctagtatcatcaaaagg 27516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 17970278 - 17970338
Alignment:
Q  336 atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccc 396  Q
    |||||||||||||||||||||| || || ||||||||| ||  || ||||| |||||||||    
T  17970278 atgtgccaaagggatatcttgcggtgtacgttggagaggaaatgaagcggtttgtgatccc 17970338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 408
Target Start/End: Original strand, 27479860 - 27479952
Alignment:
Q  316 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||| ||||||||| | |||| |||||||| || ||||| |||||||| || |||||||||  || ||| | |||||| || |||||||||||    
T  27479860 atcatcttcaaaaggtttggacgtgccaaaaggctatctagcagtatacgtaggagagaaaatgaagcgttttgtgattcctgtatcatactt 27479952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 27508163 - 27508119
Alignment:
Q  122 ctatatatattcatgactgc-aagcatttagaaccaacacaaatc 165  Q
    |||||||||||||||||||| || ||||| |||||||||||||||    
T  27508163 ctatatatattcatgactgctaaacatttcgaaccaacacaaatc 27508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 1756919 - 1756837
Alignment:
Q  335 gatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaacc 417  Q
    ||||| |||||||| |||||||||||  |||||||||||||||||| ||||| |||||||||  |||||||||| | ||||||    
T  1756919 gatgtaccaaagggctatcttgcagtgaatgttggagagaaacagaagcggtttgtgatcccaatatcatacttgaaccaacc 1756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 408
Target Start/End: Complemental strand, 1754398 - 1754330
Alignment:
Q  340 gccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||||| |||||||| || ||||||||||||||  ||  || ||||| |||||||||||||||||||||    
T  1754398 gccaaaaggatatctagctgtatatgttggagaagaaatgaagcggtttgtgatccccgtatcatactt 1754330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 1754672 - 1754739
Alignment:
Q  341 ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||||||| ||| ||||||| ||| |||||||||||||||  ||| ||||||||||  ||||||||||    
T  1754672 ccaaagggctatgttgcagtgtatattggagagaaacagaaacggcatgtgatcccaatatcatactt 1754739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 38025049 - 38024964
Alignment:
Q  323 tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||| ||  || ||||| ||| |||||| | ||||||||    
T  38025049 tcaaaagctgtgaatgtaccaaagggctatcttgcagtatatgttggagagcaaatgaagcggtttgttatccccatgtcatactt 38024964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 38031501 - 38031416
Alignment:
Q  323 tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||| ||  || ||||| ||| |||||| | ||||||||    
T  38031501 tcaaaagctgtgaatgtaccaaagggctatcttgcagtatatgttggagagcaaatgaagcggtttgttatccccatgtcatactt 38031416  T

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Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 50912043 - 50911994
Alignment:
Q  323 tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggaga 372  Q
    ||||||| |||| ||||||||||||| |||||||| ||||||||||||||    
T  50912043 tcaaaagttgtgaatgtgccaaagggctatcttgcggtatatgttggaga 50911994  T

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Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 396
Target Start/End: Original strand, 55084752 - 55084825
Alignment:
Q  323 tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccc 396  Q
    |||||| ||||| |||||||||| || | ||||||||| |||||||||||||||  || ||||| |||||||||    
T  55084752 tcaaaatctgtgaatgtgccaaaagggtgtcttgcagtgtatgttggagagaaaatgaagcggtttgtgatccc 55084825  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 50909939 - 50910025
Alignment:
Q  336 atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat 422  Q
    ||||||||||||| ||||||||||| |||||||||||| ||  |  ||||| ||| |||||| | |||||||| | |||| ||||||    
T  50909939 atgtgccaaagggttatcttgcagtgtatgttggagagcaaatgctgcggtttgttatccccatgtcatacttgaaccaagcttcat 50910025  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 50904953 - 50904917
Alignment:
Q  336 atgtgccaaagggatatcttgcagtatatgttggaga 372  Q
    ||||||||||||||||||||||||| || ||||||||    
T  50904953 atgtgccaaagggatatcttgcagtgtacgttggaga 50904917  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 21607470 - 21607385
Alignment:
Q  323 tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatactt 408  Q
    ||||||| |||| |||| ||||||||||||||||| ||||||||||||||| ||  || ||||| ||| |||||| | ||||||||    
T  21607470 tcaaaagttgtgaatgtaccaaagggatatcttgcggtatatgttggagagcaaatgaagcggtttgttatccccatgtcatactt 21607385  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 3073548 - 3073608
Alignment:
Q  336 atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccc 396  Q
    |||||||||||||||||||||| || || ||||||||| ||  || ||||| |||||||||    
T  3073548 atgtgccaaagggatatcttgcggtgtacgttggagaggaaatgaagcggtttgtgatccc 3073608  T

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