View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16513_low_11 (Length: 428)
Name: NF16513_low_11
Description: NF16513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16513_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 25 - 412
Target Start/End: Original strand, 7108239 - 7108626
Alignment:
| Q |
25 |
taagaaatatgacaagattatactcacttttaaaactactcgataaagaggagaaaatatgataagaaatacatctatcgttttttaaaactctagacct |
124 |
Q |
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| T |
7108239 |
taagaaatatgacaagattatactcacttttaaaactactcgataaagaggagaaaatatgataagaaatacatctatcattttttaaaactctagacct |
7108338 |
T |
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| Q |
125 |
taacatctttgcccgatccgtatcagaagacgccattctctcaacaaagcttaagattataagcttcattaagatggattagatatctaatacctaaccc |
224 |
Q |
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|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7108339 |
taacatctttgcccaatccgtatcagaagacgccattctcccaacaaagcttaagattataagcttcattaagatggattagatatctaatacctaaccc |
7108438 |
T |
|
| Q |
225 |
tccctcctctaatggcttacaaattttttccatgccacaatgactaatttcctcttctcaatgtccccactccaaatgaagttcctaatgcttctctcca |
324 |
Q |
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||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7108439 |
tccttcctctaatggcttacaaatttttttcatgccacaatgactaatttcctcttctcaatgtccccactccaaatgaagttcctaatgcttctctcca |
7108538 |
T |
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| Q |
325 |
aatcttttaacaatgaaaatggcaaaccatataagaacaaattgtgtatcagtattccttgaatcaatgagattactatggttttctg |
412 |
Q |
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|||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7108539 |
aatcttttaacaatgaaaatagcaaagcatataaggacaaattgtgtatcagtattccttgaatcaatgagattactatggttttctg |
7108626 |
T |
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