View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16513_low_12 (Length: 424)

Name: NF16513_low_12
Description: NF16513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16513_low_12
NF16513_low_12
[»] chr8 (87 HSPs)
chr8 (11-285)||(22943051-22943324)
chr8 (295-401)||(22651929-22652035)
chr8 (297-404)||(29510306-29510413)
chr8 (295-404)||(2572056-2572165)
chr8 (289-381)||(20873042-20873134)
chr8 (256-347)||(4948659-4948748)
chr8 (289-373)||(36450748-36450832)
chr8 (256-354)||(25566841-25566943)
chr8 (292-404)||(926785-926897)
chr8 (295-395)||(13436964-13437064)
chr8 (286-381)||(8343289-8343384)
chr8 (286-356)||(8342970-8343040)
chr8 (296-381)||(4298887-4298972)
chr8 (289-362)||(18407711-18407784)
chr8 (292-365)||(22595983-22596056)
chr8 (295-371)||(15816129-15816205)
chr8 (296-392)||(22197743-22197839)
chr8 (289-365)||(24613510-24613585)
chr8 (256-347)||(31514879-31514967)
chr8 (289-396)||(31556955-31557061)
chr8 (296-398)||(4673426-4673528)
chr8 (289-371)||(5813575-5813657)
chr8 (301-362)||(41831946-41832007)
chr8 (291-383)||(18170478-18170570)
chr8 (291-383)||(18634046-18634138)
chr8 (289-404)||(24413553-24413669)
chr8 (298-386)||(25192350-25192438)
chr8 (293-349)||(30077385-30077441)
chr8 (289-345)||(40332200-40332256)
chr8 (295-401)||(24857962-24858070)
chr8 (295-370)||(30271291-30271366)
chr8 (257-369)||(31236538-31236651)
chr8 (290-362)||(13844591-13844663)
chr8 (289-404)||(37283806-37283919)
chr8 (289-348)||(3025557-3025616)
chr8 (300-383)||(27213518-27213601)
chr8 (301-404)||(44067466-44067569)
chr8 (310-404)||(24362217-24362311)
chr8 (295-381)||(24669406-24669492)
chr8 (296-402)||(28384995-28385101)
chr8 (290-348)||(34897091-34897149)
chr8 (296-365)||(20679396-20679465)
chr8 (293-404)||(4786336-4786441)
chr8 (303-371)||(41838131-41838199)
chr8 (295-346)||(11927086-11927137)
chr8 (295-378)||(11944641-11944724)
chr8 (295-354)||(21465412-21465471)
chr8 (296-347)||(29447111-29447162)
chr8 (297-371)||(7442828-7442902)
chr8 (289-346)||(33405378-33405435)
chr8 (285-371)||(22204622-22204710)
chr8 (291-363)||(27101506-27101577)
chr8 (287-327)||(30271247-30271287)
chr8 (296-347)||(14134706-14134757)
chr8 (256-348)||(12606797-12606882)
chr8 (295-345)||(17468508-17468558)
chr8 (295-373)||(25172698-25172776)
chr8 (295-381)||(28745471-28745557)
chr8 (310-404)||(36934620-36934714)
chr8 (290-379)||(3677761-3677850)
chr8 (297-402)||(7658415-7658520)
chr8 (256-328)||(11833888-11833963)
chr8 (290-347)||(26434187-26434244)
chr8 (289-365)||(9414869-9414945)
chr8 (290-346)||(12985400-12985456)
chr8 (310-362)||(39954294-39954346)
chr8 (294-354)||(44694791-44694851)
chr8 (295-334)||(26902175-26902214)
chr8 (286-373)||(31109509-31109596)
chr8 (299-402)||(34222900-34223002)
chr8 (310-348)||(4611540-4611578)
chr8 (295-333)||(8847277-8847315)
chr8 (310-348)||(14731718-14731756)
chr8 (292-346)||(31580124-31580178)
chr8 (289-404)||(43737805-43737922)
chr8 (297-346)||(11803267-11803316)
chr8 (321-374)||(12936517-12936570)
chr8 (310-347)||(13203648-13203685)
chr8 (293-326)||(15023255-15023288)
chr8 (315-348)||(18067954-18067987)
chr8 (305-346)||(28642416-28642457)
chr8 (256-285)||(31109464-31109493)
chr8 (256-288)||(3025632-3025664)
chr8 (295-346)||(16867205-16867259)
chr8 (290-346)||(18646180-18646236)
chr8 (312-344)||(22493504-22493536)
chr8 (321-349)||(35519833-35519861)
[»] chr5 (111 HSPs)
chr5 (290-397)||(21191051-21191158)
chr5 (263-404)||(13287366-13287508)
chr5 (295-404)||(21522700-21522809)
chr5 (295-404)||(21533266-21533375)
chr5 (256-386)||(6247590-6247723)
chr5 (294-404)||(15382427-15382539)
chr5 (295-404)||(19579651-19579760)
chr5 (256-404)||(6326259-6326406)
chr5 (256-384)||(24906258-24906390)
chr5 (295-400)||(21541984-21542089)
chr5 (300-373)||(14674250-14674323)
chr5 (289-349)||(21576739-21576799)
chr5 (295-371)||(39698524-39698600)
chr5 (292-363)||(8420018-8420089)
chr5 (262-357)||(15883984-15884084)
chr5 (297-404)||(17177025-17177132)
chr5 (290-365)||(33178014-33178089)
chr5 (295-401)||(30183502-30183608)
chr5 (295-365)||(31084312-31084382)
chr5 (295-381)||(41633708-41633794)
chr5 (290-356)||(42893358-42893424)
chr5 (256-370)||(10298553-10298663)
chr5 (295-395)||(37328844-37328944)
chr5 (303-383)||(4105228-4105310)
chr5 (291-398)||(16203791-16203898)
chr5 (298-404)||(41995421-41995525)
chr5 (298-373)||(43001781-43001856)
chr5 (299-369)||(7218271-7218341)
chr5 (295-356)||(7677703-7677764)
chr5 (310-395)||(22013373-22013458)
chr5 (296-404)||(36642763-36642870)
chr5 (295-365)||(3966492-3966562)
chr5 (289-363)||(28588668-28588742)
chr5 (296-381)||(30135286-30135372)
chr5 (296-365)||(21351906-21351975)
chr5 (289-348)||(30502382-30502441)
chr5 (289-348)||(30542725-30542784)
chr5 (289-344)||(43564891-43564946)
chr5 (314-384)||(19552562-19552632)
chr5 (290-395)||(19820391-19820494)
chr5 (289-381)||(14422877-14422967)
chr5 (311-404)||(16304440-16304533)
chr5 (289-404)||(6770493-6770606)
chr5 (306-386)||(22299492-22299571)
chr5 (289-357)||(27932232-27932300)
chr5 (256-378)||(22423770-22423895)
chr5 (295-365)||(11685928-11685998)
chr5 (295-404)||(6401448-6401557)
chr5 (295-348)||(6471889-6471942)
chr5 (302-347)||(15405062-15405107)
chr5 (289-386)||(26312737-26312834)
chr5 (290-346)||(2548395-2548451)
chr5 (289-373)||(34879331-34879415)
chr5 (295-347)||(40131628-40131680)
chr5 (289-344)||(18421835-18421890)
chr5 (312-395)||(42469180-42469263)
chr5 (295-365)||(2436911-2436981)
chr5 (316-386)||(21137657-21137727)
chr5 (301-404)||(23015995-23016100)
chr5 (315-373)||(40000555-40000613)
chr5 (301-346)||(5467984-5468029)
chr5 (295-336)||(12199948-12199989)
chr5 (291-364)||(23220973-23221046)
chr5 (257-334)||(32426832-32426908)
chr5 (295-348)||(36838549-36838602)
chr5 (295-348)||(41091257-41091310)
chr5 (295-347)||(5894833-5894885)
chr5 (289-393)||(17123009-17123113)
chr5 (295-404)||(25888293-25888404)
chr5 (302-362)||(38464371-38464431)
chr5 (301-349)||(131766-131816)
chr5 (295-346)||(16374342-16374393)
chr5 (289-348)||(23012402-23012461)
chr5 (320-363)||(26716135-26716178)
chr5 (320-363)||(26985875-26985918)
chr5 (310-365)||(27144452-27144507)
chr5 (256-303)||(41995531-41995577)
chr5 (312-346)||(4344750-4344784)
chr5 (312-402)||(15410465-15410555)
chr5 (302-347)||(17088291-17088337)
chr5 (310-348)||(17593737-17593775)
chr5 (256-285)||(4105343-4105372)
chr5 (291-340)||(10010568-10010617)
chr5 (295-376)||(12641652-12641733)
chr5 (256-285)||(14873606-14873635)
chr5 (256-285)||(17123131-17123160)
chr5 (311-344)||(19438353-19438386)
chr5 (367-404)||(20683331-20683368)
chr5 (256-285)||(21191002-21191031)
chr5 (256-285)||(21576691-21576720)
chr5 (319-368)||(22611761-22611810)
chr5 (310-343)||(24273045-24273078)
chr5 (310-343)||(24389136-24389169)
chr5 (301-346)||(25863212-25863257)
chr5 (310-391)||(28262411-28262492)
chr5 (301-346)||(31264446-31264491)
chr5 (310-347)||(35017044-35017081)
chr5 (256-285)||(35017127-35017156)
chr5 (297-346)||(38749565-38749614)
chr5 (256-285)||(39268544-39268573)
chr5 (256-285)||(39698636-39698665)
chr5 (289-334)||(42029772-42029817)
chr5 (256-285)||(43001889-43001918)
chr5 (321-380)||(6072339-6072399)
chr5 (290-346)||(7997162-7997217)
chr5 (299-347)||(12159959-12160007)
chr5 (296-344)||(14873527-14873575)
chr5 (290-346)||(17925167-17925223)
chr5 (296-336)||(19028999-19029039)
chr5 (310-346)||(30098334-30098370)
chr5 (310-346)||(33035816-33035852)
[»] chr6 (120 HSPs)
chr6 (256-404)||(7938066-7938213)
chr6 (290-404)||(7977825-7977939)
chr6 (295-404)||(16766647-16766756)
chr6 (289-404)||(8776967-8777082)
chr6 (295-404)||(9107370-9107479)
chr6 (289-386)||(34595102-34595199)
chr6 (289-404)||(426508-426623)
chr6 (293-395)||(853857-853959)
chr6 (289-373)||(17841583-17841667)
chr6 (289-373)||(28152080-28152163)
chr6 (295-381)||(12696297-12696383)
chr6 (295-395)||(8365519-8365619)
chr6 (289-401)||(28715256-28715360)
chr6 (295-381)||(10770674-10770760)
chr6 (295-404)||(9027128-9027237)
chr6 (295-404)||(10294057-10294166)
chr6 (297-381)||(16833281-16833365)
chr6 (301-404)||(1681708-1681811)
chr6 (294-404)||(3209332-3209442)
chr6 (295-386)||(7930273-7930364)
chr6 (289-378)||(4877918-4878008)
chr6 (295-404)||(31384870-31384979)
chr6 (289-381)||(33001283-33001375)
chr6 (289-404)||(5732504-5732619)
chr6 (294-357)||(7801155-7801218)
chr6 (289-367)||(32978893-32978972)
chr6 (288-346)||(403857-403915)
chr6 (289-367)||(19040339-19040417)
chr6 (256-365)||(31959148-31959263)
chr6 (303-404)||(4118341-4118442)
chr6 (294-391)||(9629346-9629443)
chr6 (289-365)||(24645469-24645546)
chr6 (289-357)||(1191694-1191762)
chr6 (290-370)||(7265588-7265668)
chr6 (296-404)||(15489733-15489840)
chr6 (295-378)||(3398595-3398677)
chr6 (266-357)||(21924907-21924997)
chr6 (295-386)||(34073347-34073438)
chr6 (295-404)||(5970108-5970211)
chr6 (289-347)||(6898275-6898333)
chr6 (297-347)||(9522898-9522948)
chr6 (256-348)||(7086801-7086898)
chr6 (256-348)||(9025451-9025547)
chr6 (295-404)||(18367787-18367895)
chr6 (295-404)||(21395308-21395416)
chr6 (289-404)||(7377935-7378044)
chr6 (286-365)||(7996368-7996448)
chr6 (286-365)||(8022353-8022433)
chr6 (263-349)||(9911495-9911583)
chr6 (307-374)||(2224206-2224273)
chr6 (290-344)||(1700362-1700416)
chr6 (256-348)||(8805530-8805625)
chr6 (297-379)||(9658854-9658936)
chr6 (303-373)||(17435180-17435250)
chr6 (310-404)||(34290092-34290186)
chr6 (302-395)||(17341671-17341763)
chr6 (289-363)||(27904030-27904106)
chr6 (286-346)||(6327509-6327569)
chr6 (289-373)||(23771560-23771643)
chr6 (289-404)||(13851686-13851801)
chr6 (335-402)||(23130519-23130586)
chr6 (289-336)||(26402674-26402721)
chr6 (293-348)||(32511664-32511719)
chr6 (289-363)||(13364699-13364773)
chr6 (305-355)||(25010212-25010262)
chr6 (289-346)||(31579221-31579276)
chr6 (311-404)||(5000642-5000735)
chr6 (295-355)||(8713978-8714039)
chr6 (290-347)||(12627572-12627629)
chr6 (289-326)||(16388211-16388248)
chr6 (295-404)||(20371110-20371214)
chr6 (286-367)||(34172180-34172261)
chr6 (295-347)||(7151419-7151471)
chr6 (302-365)||(17302545-17302609)
chr6 (296-392)||(19044426-19044522)
chr6 (308-404)||(25096373-25096469)
chr6 (274-349)||(31428983-31429058)
chr6 (312-395)||(6389702-6389785)
chr6 (295-346)||(9617442-9617493)
chr6 (310-345)||(16388248-16388283)
chr6 (295-362)||(26562681-26562748)
chr6 (297-404)||(32299225-32299332)
chr6 (301-347)||(2117083-2117129)
chr6 (295-344)||(7027251-7027301)
chr6 (312-362)||(10842524-10842574)
chr6 (302-396)||(35125612-35125706)
chr6 (291-340)||(6751878-6751927)
chr6 (315-404)||(10339146-10339235)
chr6 (290-343)||(13360367-13360420)
chr6 (310-399)||(32248940-32249029)
chr6 (310-347)||(34225824-34225861)
chr6 (303-359)||(6349745-6349801)
chr6 (295-343)||(7973665-7973713)
chr6 (295-347)||(9195754-9195806)
chr6 (300-348)||(30866149-30866197)
chr6 (299-346)||(18252755-18252802)
chr6 (310-401)||(24115862-24115953)
chr6 (299-346)||(25038075-25038122)
chr6 (258-359)||(29220243-29220340)
chr6 (310-348)||(1532246-1532284)
chr6 (295-357)||(8931602-8931664)
chr6 (294-344)||(14155238-14155288)
chr6 (295-365)||(16111757-16111827)
chr6 (297-347)||(26178683-26178733)
chr6 (291-369)||(32298603-32298681)
chr6 (302-396)||(33340392-33340486)
chr6 (256-285)||(4878026-4878055)
chr6 (295-348)||(6214566-6214619)
chr6 (301-342)||(11591876-11591917)
chr6 (256-285)||(17327596-17327625)
chr6 (256-285)||(17841535-17841564)
chr6 (295-340)||(19369831-19369876)
chr6 (295-348)||(20576633-20576686)
chr6 (289-357)||(30851599-30851665)
chr6 (310-346)||(5462694-5462730)
chr6 (289-365)||(5626690-5626766)
chr6 (310-346)||(7569183-7569219)
chr6 (256-284)||(7723205-7723233)
chr6 (289-345)||(7740650-7740706)
chr6 (286-322)||(16388070-16388106)
[»] chr4 (101 HSPs)
chr4 (289-404)||(23292980-23293095)
chr4 (289-401)||(35157979-35158091)
chr4 (291-386)||(21945471-21945566)
chr4 (295-404)||(19482618-19482727)
chr4 (256-404)||(42640482-42640637)
chr4 (256-373)||(30298927-30299042)
chr4 (256-373)||(30327795-30327910)
chr4 (295-381)||(3947766-3947852)
chr4 (289-354)||(28964242-28964307)
chr4 (289-381)||(49430998-49431091)
chr4 (289-373)||(12797332-12797415)
chr4 (289-348)||(29205450-29205509)
chr4 (289-347)||(54580017-54580075)
chr4 (289-398)||(12895268-12895377)
chr4 (303-404)||(27706185-27706286)
chr4 (265-365)||(6879435-6879535)
chr4 (289-356)||(2361969-2362036)
chr4 (256-404)||(20633435-20633584)
chr4 (295-349)||(11596352-11596406)
chr4 (296-404)||(847901-848009)
chr4 (295-386)||(28084489-28084581)
chr4 (289-348)||(8423712-8423771)
chr4 (295-362)||(12895116-12895183)
chr4 (293-356)||(38847010-38847073)
chr4 (256-346)||(22440563-22440651)
chr4 (310-404)||(36635274-36635368)
chr4 (297-346)||(6485613-6485662)
chr4 (289-346)||(16073403-16073459)
chr4 (295-380)||(16303266-16303351)
chr4 (255-336)||(30094041-30094127)
chr4 (289-381)||(34306798-34306889)
chr4 (301-404)||(24343457-24343560)
chr4 (289-404)||(40179630-40179745)
chr4 (289-347)||(4157157-4157214)
chr4 (303-381)||(40481610-40481687)
chr4 (296-356)||(715608-715669)
chr4 (296-356)||(752934-752995)
chr4 (303-371)||(11651142-11651210)
chr4 (256-347)||(17425353-17425441)
chr4 (305-381)||(28720849-28720924)
chr4 (294-365)||(15029754-15029825)
chr4 (296-347)||(24613702-24613753)
chr4 (295-404)||(30982878-30982984)
chr4 (296-355)||(47263985-47264044)
chr4 (303-354)||(51701258-51701309)
chr4 (286-336)||(482229-482279)
chr4 (310-404)||(903872-903966)
chr4 (289-335)||(4157455-4157501)
chr4 (295-404)||(12708096-12708206)
chr4 (295-362)||(50280873-50280942)
chr4 (256-404)||(10499233-10499377)
chr4 (303-348)||(37203270-37203315)
chr4 (295-347)||(4383375-4383426)
chr4 (296-392)||(11931242-11931338)
chr4 (302-398)||(14126118-14126214)
chr4 (291-394)||(42014918-42015022)
chr4 (295-386)||(5414172-5414263)
chr4 (308-347)||(14465088-14465127)
chr4 (296-346)||(28000743-28000794)
chr4 (289-356)||(31800472-31800539)
chr4 (300-363)||(40613441-40613504)
chr4 (296-346)||(5775359-5775409)
chr4 (290-348)||(16189715-16189773)
chr4 (319-400)||(20521873-20521954)
chr4 (295-371)||(22234890-22234967)
chr4 (264-365)||(24543970-24544075)
chr4 (293-357)||(4672083-4672147)
chr4 (289-340)||(13307891-13307942)
chr4 (295-365)||(35723384-35723455)
chr4 (291-346)||(36386207-36386262)
chr4 (298-336)||(2626018-2626056)
chr4 (291-345)||(9996849-9996903)
chr4 (308-342)||(12224208-12224242)
chr4 (327-365)||(12628617-12628655)
chr4 (295-373)||(13783262-13783340)
chr4 (310-344)||(24999054-24999088)
chr4 (290-348)||(33950142-33950200)
chr4 (289-339)||(36409506-36409556)
chr4 (289-339)||(36423672-36423722)
chr4 (310-404)||(44081592-44081686)
chr4 (310-348)||(56257939-56257977)
chr4 (256-285)||(715551-715580)
chr4 (256-285)||(752877-752906)
chr4 (256-285)||(3064874-3064903)
chr4 (256-285)||(4383450-4383479)
chr4 (256-285)||(5775310-5775339)
chr4 (295-348)||(15659760-15659813)
chr4 (295-336)||(19312353-19312394)
chr4 (312-365)||(20743295-20743348)
chr4 (256-285)||(23292932-23292961)
chr4 (256-285)||(28084608-28084637)
chr4 (295-348)||(30838216-30838269)
chr4 (289-334)||(35161056-35161101)
chr4 (311-348)||(38148741-38148778)
chr4 (290-334)||(13117449-13117493)
chr4 (310-373)||(16184800-16184861)
chr4 (310-386)||(16402226-16402302)
chr4 (296-344)||(18576038-18576086)
chr4 (313-373)||(30522933-30522993)
chr4 (295-347)||(32273526-32273578)
chr4 (310-346)||(32910559-32910595)
[»] scaffold0053 (1 HSPs)
scaffold0053 (289-404)||(8748-8863)
[»] chr7 (96 HSPs)
chr7 (289-404)||(25481852-25481967)
chr7 (295-400)||(24339596-24339701)
chr7 (288-404)||(11061069-11061185)
chr7 (295-404)||(5409836-5409945)
chr7 (295-395)||(27945000-27945100)
chr7 (295-402)||(13770643-13770750)
chr7 (289-404)||(26733254-26733369)
chr7 (296-365)||(7438695-7438764)
chr7 (256-357)||(28155567-28155667)
chr7 (295-404)||(9778458-9778559)
chr7 (289-404)||(21880104-21880217)
chr7 (256-404)||(35861908-35862064)
chr7 (294-381)||(24105651-24105738)
chr7 (295-386)||(43027469-43027560)
chr7 (257-373)||(18215144-18215264)
chr7 (289-365)||(15680798-15680874)
chr7 (256-348)||(19213809-19213906)
chr7 (260-356)||(3991322-3991422)
chr7 (299-349)||(26033465-26033515)
chr7 (290-363)||(7197292-7197365)
chr7 (289-356)||(8234144-8234211)
chr7 (295-346)||(9408334-9408385)
chr7 (295-404)||(1433404-1433513)
chr7 (295-404)||(1885523-1885632)
chr7 (295-346)||(18039006-18039058)
chr7 (304-398)||(13557750-13557847)
chr7 (297-404)||(17851381-17851488)
chr7 (295-354)||(19992001-19992060)
chr7 (290-365)||(20549780-20549855)
chr7 (295-365)||(21560487-21560562)
chr7 (289-381)||(21864779-21864873)
chr7 (295-361)||(32094020-32094087)
chr7 (289-379)||(33994187-33994277)
chr7 (289-378)||(3721070-3721158)
chr7 (295-357)||(11272586-11272650)
chr7 (296-369)||(11665441-11665514)
chr7 (295-404)||(26329382-26329491)
chr7 (256-348)||(30813818-30813910)
chr7 (256-362)||(40287308-40287423)
chr7 (301-386)||(43249961-43250046)
chr7 (295-364)||(2334238-2334309)
chr7 (295-347)||(7058433-7058485)
chr7 (297-381)||(15902795-15902879)
chr7 (289-348)||(1401031-1401090)
chr7 (292-371)||(9482917-9482996)
chr7 (296-347)||(13300417-13300468)
chr7 (310-381)||(22868015-22868086)
chr7 (295-362)||(25822647-25822714)
chr7 (310-381)||(29787384-29787455)
chr7 (311-374)||(32308100-32308163)
chr7 (295-401)||(22602710-22602816)
chr7 (289-371)||(23191879-23191961)
chr7 (318-383)||(11722121-11722186)
chr7 (295-404)||(21140982-21141091)
chr7 (287-404)||(21826223-21826340)
chr7 (311-404)||(30730987-30731080)
chr7 (289-404)||(18213027-18213143)
chr7 (296-340)||(48438560-48438604)
chr7 (295-346)||(11890919-11890970)
chr7 (296-379)||(19206025-19206108)
chr7 (310-348)||(2424620-2424658)
chr7 (305-347)||(11831439-11831481)
chr7 (295-373)||(18013074-18013152)
chr7 (256-401)||(29763135-29763280)
chr7 (290-348)||(42720885-42720943)
chr7 (295-348)||(7328691-7328744)
chr7 (289-334)||(25956465-25956510)
chr7 (291-348)||(32287459-32287516)
chr7 (289-334)||(39138464-39138509)
chr7 (298-386)||(2425736-2425824)
chr7 (295-359)||(5548671-5548735)
chr7 (291-347)||(5835254-5835310)
chr7 (297-381)||(7973125-7973214)
chr7 (290-346)||(38143231-38143287)
chr7 (256-380)||(49107795-49107918)
chr7 (289-392)||(598170-598273)
chr7 (314-373)||(4880929-4880988)
chr7 (295-346)||(6028633-6028684)
chr7 (312-365)||(13585296-13585346)
chr7 (295-346)||(16341504-16341555)
chr7 (295-378)||(21930605-21930687)
chr7 (295-365)||(6630912-6630982)
chr7 (295-373)||(10042918-10042996)
chr7 (310-348)||(12289120-12289158)
chr7 (310-348)||(14729707-14729745)
chr7 (291-365)||(22484014-22484088)
chr7 (259-348)||(24146822-24146905)
chr7 (296-333)||(640134-640171)
chr7 (256-285)||(5409777-5409806)
chr7 (312-348)||(22306537-22306574)
chr7 (290-346)||(4909159-4909215)
chr7 (307-347)||(5954254-5954294)
chr7 (310-346)||(11700811-11700847)
chr7 (290-346)||(12278843-12278898)
chr7 (295-343)||(17307904-17307952)
chr7 (297-365)||(41020485-41020553)
[»] scaffold0027 (1 HSPs)
scaffold0027 (256-404)||(46632-46770)
[»] chr1 (133 HSPs)
chr1 (291-404)||(42359445-42359558)
chr1 (256-365)||(35702548-35702658)
chr1 (295-404)||(1486709-1486818)
chr1 (256-365)||(22881573-22881686)
chr1 (289-404)||(38078655-38078765)
chr1 (310-404)||(398780-398874)
chr1 (295-404)||(6612171-6612280)
chr1 (289-373)||(46348377-46348461)
chr1 (295-391)||(40917714-40917808)
chr1 (289-372)||(22515881-22515964)
chr1 (289-362)||(51410016-51410090)
chr1 (295-364)||(113289-113358)
chr1 (290-398)||(13011210-13011319)
chr1 (287-404)||(41877462-41877579)
chr1 (289-365)||(31672889-31672965)
chr1 (289-404)||(9709770-9709885)
chr1 (290-345)||(18337338-18337393)
chr1 (288-363)||(19058849-19058924)
chr1 (300-395)||(31015002-31015097)
chr1 (256-401)||(48040420-48040568)
chr1 (290-404)||(9103590-9103703)
chr1 (307-404)||(16297295-16297392)
chr1 (295-404)||(31694710-31694819)
chr1 (289-370)||(37598816-37598896)
chr1 (289-346)||(40258927-40258984)
chr1 (295-404)||(47989448-47989556)
chr1 (300-381)||(48450592-48450673)
chr1 (289-401)||(2896115-2896227)
chr1 (291-395)||(5927336-5927440)
chr1 (295-347)||(24577186-24577238)
chr1 (289-404)||(10577729-10577844)
chr1 (289-371)||(1815240-1815322)
chr1 (295-386)||(5944249-5944342)
chr1 (295-356)||(1704992-1705053)
chr1 (256-357)||(13436455-13436556)
chr1 (290-404)||(18190103-18190209)
chr1 (296-365)||(28273089-28273158)
chr1 (256-372)||(12443423-12443537)
chr1 (256-356)||(24334670-24334767)
chr1 (289-365)||(36878450-36878526)
chr1 (295-382)||(5376500-5376587)
chr1 (302-393)||(15323124-15323215)
chr1 (297-356)||(21378576-21378635)
chr1 (296-403)||(38503271-38503378)
chr1 (295-373)||(18556456-18556534)
chr1 (256-404)||(3490353-3490493)
chr1 (288-356)||(1864873-1864941)
chr1 (297-401)||(10572591-10572695)
chr1 (302-381)||(14359529-14359607)
chr1 (290-348)||(40181877-40181935)
chr1 (295-404)||(7918211-7918320)
chr1 (295-354)||(17778549-17778605)
chr1 (256-336)||(35919232-35919317)
chr1 (285-346)||(52903257-52903318)
chr1 (289-357)||(5898260-5898328)
chr1 (295-347)||(6332678-6332729)
chr1 (296-404)||(6415002-6415105)
chr1 (299-404)||(18471248-18471355)
chr1 (288-336)||(21620973-21621021)
chr1 (310-398)||(34298392-34298480)
chr1 (256-346)||(2288131-2288218)
chr1 (295-365)||(6427450-6427523)
chr1 (295-386)||(20157350-20157441)
chr1 (297-356)||(23738676-23738735)
chr1 (256-362)||(25452112-25452215)
chr1 (297-356)||(32434718-32434777)
chr1 (295-381)||(6427323-6427409)
chr1 (289-347)||(14332636-14332694)
chr1 (313-391)||(15641048-15641126)
chr1 (296-386)||(19562622-19562711)
chr1 (297-347)||(32461465-32461515)
chr1 (310-383)||(1262855-1262928)
chr1 (295-348)||(9629900-9629953)
chr1 (299-380)||(34315686-34315767)
chr1 (295-344)||(44482240-44482289)
chr1 (295-347)||(9828051-9828103)
chr1 (297-365)||(13997872-13997940)
chr1 (310-378)||(16927200-16927268)
chr1 (256-404)||(23531740-23531887)
chr1 (296-348)||(27471567-27471619)
chr1 (295-396)||(28663562-28663667)
chr1 (290-334)||(30749860-30749904)
chr1 (290-334)||(30771311-30771355)
chr1 (301-352)||(8010293-8010344)
chr1 (313-356)||(23652997-23653040)
chr1 (295-342)||(25272494-25272541)
chr1 (302-357)||(29144365-29144420)
chr1 (290-357)||(39953141-39953208)
chr1 (256-329)||(2218264-2218341)
chr1 (314-404)||(21366039-21366129)
chr1 (295-344)||(2283676-2283725)
chr1 (303-348)||(11605943-11605988)
chr1 (256-334)||(17705552-17705625)
chr1 (312-365)||(17831548-17831601)
chr1 (289-346)||(21530697-21530754)
chr1 (295-344)||(25361896-25361945)
chr1 (295-336)||(30173762-30173803)
chr1 (295-348)||(34371720-34371772)
chr1 (291-348)||(38075966-38076023)
chr1 (290-395)||(39130762-39130867)
chr1 (256-336)||(46940754-46940834)
chr1 (351-404)||(48548018-48548071)
chr1 (295-335)||(15449232-15449272)
chr1 (310-386)||(19324530-19324606)
chr1 (310-362)||(25098570-25098622)
chr1 (311-346)||(9449024-9449059)
chr1 (313-348)||(17754317-17754352)
chr1 (256-347)||(22947746-22947843)
chr1 (301-344)||(30359398-30359441)
chr1 (305-348)||(37055866-37055909)
chr1 (310-347)||(9033022-9033060)
chr1 (297-347)||(10233260-10233310)
chr1 (312-362)||(30847737-30847787)
chr1 (295-368)||(48148037-48148111)
chr1 (319-404)||(609482-609567)
chr1 (256-285)||(16297227-16297256)
chr1 (310-391)||(20608708-20608789)
chr1 (256-285)||(21365998-21366027)
chr1 (256-285)||(22515833-22515862)
chr1 (301-346)||(22794084-22794129)
chr1 (289-334)||(29163375-29163420)
chr1 (295-348)||(34712383-34712436)
chr1 (256-285)||(37598915-37598944)
chr1 (256-285)||(42359395-42359424)
chr1 (256-285)||(47989592-47989621)
chr1 (296-336)||(8117052-8117092)
chr1 (315-363)||(10474997-10475045)
chr1 (289-347)||(14248837-14248891)
chr1 (310-346)||(16164330-16164366)
chr1 (286-346)||(17219954-17220014)
chr1 (310-346)||(17425108-17425144)
chr1 (290-342)||(23636044-23636096)
chr1 (312-348)||(26238129-26238165)
[»] chr2 (91 HSPs)
chr2 (289-404)||(2438713-2438825)
chr2 (289-386)||(19536391-19536489)
chr2 (256-395)||(20539638-20539774)
chr2 (292-373)||(37558958-37559039)
chr2 (289-401)||(15972826-15972938)
chr2 (289-373)||(30404844-30404928)
chr2 (290-404)||(18421914-18422027)
chr2 (302-404)||(21374706-21374803)
chr2 (295-373)||(30717530-30717608)
chr2 (286-386)||(21624234-21624335)
chr2 (295-374)||(12668423-12668502)
chr2 (295-402)||(15657816-15657923)
chr2 (290-365)||(38117154-38117229)
chr2 (310-404)||(21616712-21616806)
chr2 (296-404)||(18276471-18276579)
chr2 (289-381)||(18841007-18841099)
chr2 (289-365)||(20473311-20473387)
chr2 (296-373)||(14996224-14996302)
chr2 (295-404)||(23058442-23058552)
chr2 (295-404)||(30335367-30335476)
chr2 (289-358)||(5040728-5040799)
chr2 (289-373)||(6940236-6940320)
chr2 (289-404)||(31283998-31284114)
chr2 (295-398)||(36756344-36756447)
chr2 (295-370)||(37419727-37419802)
chr2 (296-354)||(11223864-11223922)
chr2 (303-373)||(24894370-24894440)
chr2 (256-386)||(31018558-31018683)
chr2 (300-373)||(34221502-34221575)
chr2 (310-379)||(36409642-36409711)
chr2 (295-347)||(974754-974806)
chr2 (256-348)||(42832238-42832329)
chr2 (289-348)||(34691799-34691858)
chr2 (289-348)||(34714211-34714270)
chr2 (289-364)||(37411238-37411313)
chr2 (295-377)||(4882696-4882778)
chr2 (289-347)||(5367199-5367257)
chr2 (301-379)||(12940941-12941019)
chr2 (291-381)||(21091696-21091786)
chr2 (296-402)||(34337182-34337283)
chr2 (289-363)||(12224212-12224288)
chr2 (289-346)||(18255974-18256031)
chr2 (290-379)||(20242722-20242811)
chr2 (296-404)||(26769467-26769569)
chr2 (295-368)||(33153410-33153483)
chr2 (295-404)||(34784982-34785091)
chr2 (297-393)||(18420436-18420532)
chr2 (310-386)||(21782833-21782909)
chr2 (293-373)||(23718007-23718087)
chr2 (293-373)||(24105679-24105759)
chr2 (289-381)||(28596445-28596534)
chr2 (262-346)||(5473336-5473422)
chr2 (310-357)||(28677906-28677953)
chr2 (302-373)||(39323245-39323316)
chr2 (310-404)||(28412300-28412394)
chr2 (310-391)||(4332889-4332970)
chr2 (289-346)||(29176487-29176544)
chr2 (295-348)||(44860326-44860379)
chr2 (310-373)||(16069269-16069332)
chr2 (310-380)||(29663983-29664054)
chr2 (289-340)||(43585999-43586050)
chr2 (294-332)||(44635520-44635558)
chr2 (290-386)||(896181-896275)
chr2 (301-386)||(10535765-10535850)
chr2 (297-346)||(44605141-44605190)
chr2 (295-347)||(18622613-18622665)
chr2 (296-348)||(18889592-18889644)
chr2 (290-346)||(23921261-23921317)
chr2 (311-386)||(27459995-27460070)
chr2 (290-326)||(27460065-27460101)
chr2 (297-365)||(31808066-31808134)
chr2 (290-334)||(33884071-33884115)
chr2 (295-347)||(38442314-38442366)
chr2 (321-376)||(21148430-21148485)
chr2 (312-391)||(23354669-23354748)
chr2 (256-285)||(2438665-2438694)
chr2 (289-334)||(20922922-20922967)
chr2 (310-347)||(25846748-25846785)
chr2 (256-285)||(26769606-26769635)
chr2 (310-371)||(27286307-27286368)
chr2 (307-336)||(29367381-29367410)
chr2 (290-346)||(30298444-30298498)
chr2 (256-285)||(37419838-37419867)
chr2 (296-341)||(38355888-38355933)
chr2 (297-346)||(39279683-39279732)
chr2 (289-346)||(40361748-40361805)
chr2 (314-346)||(2331802-2331834)
chr2 (312-344)||(11308021-11308053)
chr2 (295-339)||(32749825-32749869)
chr2 (290-346)||(34006986-34007042)
chr2 (310-346)||(35449521-35449557)
[»] scaffold0652 (1 HSPs)
scaffold0652 (289-404)||(456-571)
[»] chr3 (117 HSPs)
chr3 (289-404)||(7171452-7171566)
chr3 (295-386)||(28917969-28918060)
chr3 (288-404)||(16000009-16000125)
chr3 (256-404)||(10335251-10335395)
chr3 (295-404)||(15796294-15796403)
chr3 (289-381)||(26492199-26492291)
chr3 (288-404)||(35994732-35994846)
chr3 (286-395)||(8383216-8383325)
chr3 (285-386)||(8587011-8587112)
chr3 (289-386)||(55401043-55401140)
chr3 (289-365)||(10954941-10955017)
chr3 (256-402)||(4990918-4991074)
chr3 (294-404)||(21479074-21479178)
chr3 (298-381)||(26508083-26508166)
chr3 (295-404)||(750618-750728)
chr3 (303-404)||(3164033-3164134)
chr3 (290-354)||(51206348-51206412)
chr3 (298-365)||(4987294-4987361)
chr3 (295-362)||(49651786-49651853)
chr3 (290-404)||(10268481-10268595)
chr3 (290-404)||(24205037-24205150)
chr3 (295-373)||(25948887-25948965)
chr3 (289-365)||(20503454-20503530)
chr3 (295-371)||(27505229-27505305)
chr3 (295-354)||(1509539-1509598)
chr3 (289-348)||(7928456-7928515)
chr3 (295-386)||(14829658-14829748)
chr3 (256-354)||(21256954-21257045)
chr3 (288-346)||(25775516-25775575)
chr3 (295-362)||(34910309-34910376)
chr3 (295-386)||(41961650-41961741)
chr3 (256-379)||(11610496-11610622)
chr3 (295-372)||(14832081-14832158)
chr3 (295-363)||(34185123-34185191)
chr3 (295-362)||(14209105-14209172)
chr3 (295-404)||(14747517-14747621)
chr3 (290-401)||(25093455-25093566)
chr3 (295-362)||(28812507-28812574)
chr3 (285-354)||(8593136-8593206)
chr3 (256-404)||(10318000-10318149)
chr3 (294-404)||(38731168-38731278)
chr3 (295-379)||(14216867-14216951)
chr3 (295-379)||(14222996-14223080)
chr3 (310-398)||(23915915-23916003)
chr3 (311-357)||(14979178-14979224)
chr3 (297-359)||(55212958-55213020)
chr3 (296-385)||(3610602-3610691)
chr3 (256-365)||(40052321-40052425)
chr3 (310-386)||(25064877-25064953)
chr3 (288-370)||(32400701-32400780)
chr3 (289-348)||(40993329-40993389)
chr3 (289-344)||(8789544-8789599)
chr3 (301-404)||(34307786-34307889)
chr3 (256-346)||(40150531-40150622)
chr3 (289-348)||(49505148-49505207)
chr3 (295-373)||(16788993-16789071)
chr3 (297-347)||(17005621-17005671)
chr3 (296-386)||(32429381-32429471)
chr3 (295-365)||(39756225-39756295)
chr3 (289-338)||(3865690-3865739)
chr3 (295-380)||(9800014-9800099)
chr3 (295-404)||(11665894-11666003)
chr3 (313-386)||(16789668-16789741)
chr3 (292-365)||(33359750-33359823)
chr3 (260-391)||(12674466-12674597)
chr3 (300-380)||(35312028-35312108)
chr3 (290-348)||(11251984-11252040)
chr3 (289-348)||(45451559-45451618)
chr3 (310-372)||(5407262-5407324)
chr3 (289-395)||(8842289-8842394)
chr3 (293-347)||(18426956-18427010)
chr3 (301-347)||(29508451-29508497)
chr3 (295-348)||(1550146-1550199)
chr3 (295-348)||(8039835-8039888)
chr3 (310-363)||(32804555-32804608)
chr3 (325-373)||(3865586-3865634)
chr3 (310-346)||(4201404-4201440)
chr3 (262-334)||(13414489-13414560)
chr3 (295-404)||(14027965-14028066)
chr3 (295-343)||(15314876-15314924)
chr3 (290-346)||(20691327-20691383)
chr3 (289-356)||(7614409-7614476)
chr3 (301-404)||(11658766-11658868)
chr3 (289-340)||(14338477-14338528)
chr3 (296-347)||(22774071-22774122)
chr3 (297-336)||(30184108-30184147)
chr3 (291-334)||(35222958-35223001)
chr3 (300-362)||(1514609-1514671)
chr3 (301-371)||(5339091-5339161)
chr3 (310-348)||(9624647-9624685)
chr3 (310-348)||(10690277-10690315)
chr3 (310-348)||(11313815-11313853)
chr3 (310-372)||(12703989-12704051)
chr3 (310-380)||(14840306-14840376)
chr3 (290-336)||(15505785-15505831)
chr3 (311-373)||(21720745-21720807)
chr3 (310-348)||(23870574-23870612)
chr3 (310-348)||(27277853-27277891)
chr3 (295-365)||(28678292-28678362)
chr3 (289-334)||(2941578-2941623)
chr3 (256-285)||(8789494-8789523)
chr3 (256-285)||(8842413-8842442)
chr3 (310-347)||(11493376-11493413)
chr3 (289-334)||(11507469-11507514)
chr3 (302-347)||(12083910-12083955)
chr3 (289-334)||(13845519-13845564)
chr3 (256-285)||(20503549-20503578)
chr3 (310-363)||(24633757-24633810)
chr3 (256-285)||(34185058-34185087)
chr3 (256-285)||(55401159-55401188)
chr3 (313-381)||(2620071-2620139)
chr3 (310-382)||(5441046-5441118)
chr3 (290-342)||(6780414-6780466)
chr3 (316-368)||(13620785-13620837)
chr3 (310-346)||(16192765-16192801)
chr3 (290-346)||(21149075-21149131)
chr3 (310-342)||(39002044-39002076)
[»] scaffold0223 (1 HSPs)
scaffold0223 (265-386)||(20140-20261)
[»] scaffold0021 (1 HSPs)
scaffold0021 (298-404)||(130432-130538)
[»] scaffold0018 (2 HSPs)
scaffold0018 (296-387)||(178819-178911)
scaffold0018 (302-371)||(192256-192325)
[»] scaffold0003 (1 HSPs)
scaffold0003 (295-386)||(241562-241653)
[»] scaffold0103 (1 HSPs)
scaffold0103 (303-373)||(51792-51862)
[»] scaffold0306 (1 HSPs)
scaffold0306 (294-395)||(13359-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (294-395)||(21867-21968)
[»] scaffold0050 (1 HSPs)
scaffold0050 (289-362)||(70270-70343)
[»] scaffold0008 (1 HSPs)
scaffold0008 (295-398)||(263372-263475)
[»] scaffold0136 (1 HSPs)
scaffold0136 (295-404)||(3849-3963)
[»] scaffold0007 (1 HSPs)
scaffold0007 (301-402)||(225274-225375)
[»] scaffold0361 (1 HSPs)
scaffold0361 (289-362)||(14522-14592)
[»] scaffold0122 (2 HSPs)
scaffold0122 (289-368)||(7996-8074)
scaffold0122 (295-401)||(8619-8725)
[»] scaffold0011 (1 HSPs)
scaffold0011 (296-347)||(17750-17801)
[»] scaffold0450 (1 HSPs)
scaffold0450 (295-365)||(8635-8705)
[»] scaffold0171 (2 HSPs)
scaffold0171 (295-381)||(23393-23479)
scaffold0171 (295-336)||(23529-23570)
[»] scaffold0722 (1 HSPs)
scaffold0722 (290-355)||(7027-7092)
[»] scaffold0116 (1 HSPs)
scaffold0116 (295-404)||(9848-9957)
[»] scaffold0004 (4 HSPs)
scaffold0004 (302-371)||(92790-92859)
scaffold0004 (296-365)||(123614-123686)
scaffold0004 (295-342)||(83172-83219)
scaffold0004 (256-299)||(92893-92935)
[»] scaffold0025 (1 HSPs)
scaffold0025 (295-346)||(23777-23829)
[»] scaffold0066 (1 HSPs)
scaffold0066 (307-362)||(33375-33430)
[»] scaffold0246 (1 HSPs)
scaffold0246 (303-381)||(19549-19626)
[»] scaffold0049 (1 HSPs)
scaffold0049 (290-348)||(63779-63837)
[»] scaffold0793 (2 HSPs)
scaffold0793 (296-356)||(4884-4945)
scaffold0793 (256-285)||(4827-4856)
[»] scaffold0168 (1 HSPs)
scaffold0168 (256-398)||(20999-21143)
[»] scaffold0083 (1 HSPs)
scaffold0083 (289-381)||(45524-45617)
[»] scaffold0019 (1 HSPs)
scaffold0019 (295-365)||(71712-71784)
[»] scaffold0044 (1 HSPs)
scaffold0044 (298-395)||(53143-53236)
[»] scaffold0020 (1 HSPs)
scaffold0020 (295-348)||(135312-135365)
[»] scaffold0036 (1 HSPs)
scaffold0036 (295-347)||(9747-9799)
[»] scaffold0236 (1 HSPs)
scaffold0236 (295-346)||(25768-25819)
[»] scaffold0227 (1 HSPs)
scaffold0227 (303-362)||(7319-7378)
[»] scaffold0697 (1 HSPs)
scaffold0697 (289-346)||(1652-1709)
[»] scaffold0123 (1 HSPs)
scaffold0123 (299-348)||(44529-44578)
[»] scaffold0475 (2 HSPs)
scaffold0475 (291-404)||(3266-3371)
scaffold0475 (256-285)||(3392-3421)
[»] scaffold0009 (3 HSPs)
scaffold0009 (288-336)||(174546-174594)
scaffold0009 (288-336)||(180059-180107)
scaffold0009 (257-285)||(188484-188512)
[»] scaffold1528 (1 HSPs)
scaffold1528 (313-348)||(1041-1076)
[»] scaffold0126 (1 HSPs)
scaffold0126 (295-373)||(19126-19203)
[»] scaffold0376 (1 HSPs)
scaffold0376 (295-348)||(6318-6371)
[»] scaffold0086 (2 HSPs)
scaffold0086 (295-336)||(2946-2987)
scaffold0086 (256-284)||(3024-3052)
[»] scaffold0512 (1 HSPs)
scaffold0512 (289-317)||(5030-5058)
[»] scaffold0057 (1 HSPs)
scaffold0057 (308-356)||(24023-24071)
[»] scaffold0022 (1 HSPs)
scaffold0022 (310-346)||(90851-90887)


Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 87)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 22943051 - 22943324
Alignment:
Q  11 caaaggccgggttctatcaaacgattttgtcgttagaaagctcgaaaaactctgcactgaaaaagacatatctgccaagaagacaataacaggaactgtt 110  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22943051 caaaggccgtgttctatcaaatgattttgtcgttagaaagctcgaaaaactctgcactgaaaaagacatatctgccaagaagacaataacaggaactgtt 22943150  T
Q  111 aattttccgttatggggaggattcaatagcagcaaatgtggtgtagctgtctttgttcaaagcccttctcaccagatttttggttcacagagttttcacc 210  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22943151 aattttccattgtggggaggattcaatagcagcaaatgtggtgtagctgtctttgttcaaagcccttctcaccagatttttggttcacagagttttcacc 22943250  T
Q  211 taccggatgatatatgatatgatttttgtagtaaaatttgtcattagcacggacactcctcggattaggcgtgtc 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22943251 taccggatgatatatgatatgatttttgtagtaaaatttgtcattagcac-gacactcctcggattaggcgtgtc 22943324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 295 - 401
Target Start/End: Complemental strand, 22652035 - 22651929
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccg 22651936  T
Q  395 tatccgt 401  Q
    |||||||    
T  22651935 tatccgt 22651929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 404
Target Start/End: Original strand, 29510306 - 29510413
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||  |||| |||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagta 29510405  T
Q  397 tccgtgct 404  Q
    ||||||||    
T  29510406 tccgtgct 29510413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 2572056 - 2572165
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| | |||| |||||||||| |||||| ||||| |||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccg 2572155  T
Q  395 tatccgtgct 404  Q
    ||||| ||||    
T  2572156 tatccatgct 2572165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 289 - 381
Target Start/End: Complemental strand, 20873134 - 20873042
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||| ||||||| |||||||    
T  20873134 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 4948748 - 4948659
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||| |||||| |  ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4948748 agcacgtacactcattcgattaggcgtgtctc--gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 36450748 - 36450832
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| | ||||||| ||||||| |||||||    
T  36450748 cgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgt 36450832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 25566943 - 25566841
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc----acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctct 351  Q
    ||||| ||||||||||||||||||||||||    ||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25566943 agcacagacactcctcggattaggcgtgtcccggacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgt 25566844  T
Q  352 gtc 354  Q
    |||    
T  25566843 gtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 404
Target Start/End: Original strand, 926785 - 926897
Alignment:
Q  292 gtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    ||||||||||||||||| |||||||||||||  ||| |||||| ||||||||||||   ||| ||| ||||||| ||||||| |||||||||||| ||||    
T  926785 gtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgt 926884  T
Q  392 ccgtatccgtgct 404  Q
     ||||||||||||    
T  926885 tcgtatccgtgct 926897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 395
Target Start/End: Original strand, 13436964 - 13437064
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||  |||||||||||  ||||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccg 13437063  T
Q  395 t 395  Q
    |    
T  13437064 t 13437064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 381
Target Start/End: Complemental strand, 8343384 - 8343289
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  |||| || || |||| |||||||    
T  8343384 acacgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccg 8343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 8343040 - 8342970
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  8343040 acacatgtacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcgg 8342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 4298887 - 4298972
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| || ||||||| ||| |||||| |||| |||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccg 4298972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 18407784 - 18407711
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  18407784 cgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtc 18407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 22596056 - 22595983
Alignment:
Q  292 gtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| |||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagt 22595983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||||||| ||||||| |||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 392
Target Start/End: Original strand, 22197743 - 22197839
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtc 392  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||| ||| ||| || |||| |||||||||||| |||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgtc 22197839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 24613585 - 24613510
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||  |||||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcggtgtgtcagt 24613510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 31514967 - 31514879
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattag 347  Q
    ||||||||||||||||||||||||||||||    |||||| ||||| ||||||||| |||| ||||||||||||||| |||||||||||||||    
T  31514967 agcacggacactcctcggattaggcgtgtc----gtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattag 31514879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 396
Target Start/End: Complemental strand, 31557061 - 31556955
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||  || |||  ||||||||||| |    
T  31557061 cgtgtctgacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccg 31556963  T
Q  389 tgtccgta 396  Q
    | ||||||    
T  31556962 tatccgta 31556955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 4673426 - 4673528
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||| || |||||||||||||||||||| | ||||||||||||||||||| || ||||||| ||||||| || |||| ||||||| |||| || |||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgt 4673525  T
Q  396 atc 398  Q
    |||    
T  4673526 atc 4673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 5813657 - 5813575
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||||| ||||||| |||| || |||||    
T  5813657 cgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 41831946 - 41832007
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcggcatgtc 41832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 18170478 - 18170570
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggt 383  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| |||  | ||||||| ||||||| ||||||| ||| |||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggt 18170570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 18634046 - 18634138
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggt 383  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||||| |||  | ||||||| ||||||| ||||||| ||| |||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggt 18634138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 24413553 - 24413669
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa-ttattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtca 387  Q
    |||||||||||| ||||||| ||||||| |||||||||||  |||| ||||| |||||| |  |||| | |||||||| ||||||| ||||| ||||||     
T  24413553 cgtgtccgacactgacacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtcc 24413652  T
Q  388 gtgtccgtatccgtgct 404  Q
    |||||||||||||||||    
T  24413653 gtgtccgtatccgtgct 24413669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 298 - 386
Target Start/End: Original strand, 25192350 - 25192438
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||| |||||| |||||||||||| | |||||||||||||||||| ||||||| ||||||| ||||| | ||||||| ||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtc 25192438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 30077385 - 30077441
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagct 349  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagct 30077441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 40332256 - 40332200
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 345  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40332256 cgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 401
Target Start/End: Complemental strand, 24858070 - 24857962
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttttt---caaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    ||||| ||||||||||| ||||||||||||||||||||||||   |||||||||| || ||||||| ||||  | ||||||| |||||||||||  ||||    
T  24858070 cgacaacgacacttgta-ttacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgt 24857972  T
Q  392 ccgtatccgt 401  Q
    ||||||||||    
T  24857971 ccgtatccgt 24857962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 30271291 - 30271366
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccg 370  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||| ||||    
T  30271291 cgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 369
Target Start/End: Original strand, 31236538 - 31236651
Alignment:
Q  257 gcacggacactcctcggattaggcgtgtcaca-cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    ||||||||||| || || ||||  ||||| || |||||||| ||||||||| | |||||||| |||||||||||||||| |||||||||||||  |||||    
T  31236538 gcacggacacttctagggttagctgtgtcccatcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcg 31236637  T
Q  356 gcatgtcagtatcc 369  Q
    || |||| ||||||    
T  31236638 gcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 13844591 - 13844663
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    ||||||||||||||||| | |||||||||| |||||||||||||| |||||||||||||  ||||||| ||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 37283806 - 37283919
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||| |||||||||| |  |||||||||||||||||||||||| ||| |||||||||  || | |||||||||| |||||||  |||| ||||||      
T  37283806 cgtgtcccacaccgacacat--aattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtcca 37283903  T
Q  389 tgtccgtatccgtgct 404  Q
    ||| ||||||||||||    
T  37283904 tgtacgtatccgtgct 37283919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 3025616 - 3025557
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||    
T  3025616 cgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 383
Target Start/End: Complemental strand, 27213601 - 27213518
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggt 383  Q
    ||||||| | |||||||| |||||||||||||||| | |||||||||||  ||||||| |||| |||||||||| |||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccggt 27213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 44067569 - 44067466
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccg 400  Q
    |||||||| ||||||||||| ||||||| ||||| ||||||||||| |  ||||||| ||||||| || |||| ||||| |||||| ||||| || ||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccg 44067470  T
Q  401 tgct 404  Q
    ||||    
T  44067469 tgct 44067466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 24362217 - 24362311
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||||||||||||||||| | |||||||||||||  ||||||| |||| || || |||| || ||||||||| || |||||||| |||||    
T  24362217 taattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgct 24362311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 24669492 - 24669406
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||||||||||||||||| ||||  ||||||||||| |  |||| || ||||||| || |||| |||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccg 24669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 28384995 - 28385101
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||||||||| | |||||||||||||||||| ||||| |||| ||||||| |  |||||| |||||||| ||||||| |||| | || || |||| |||    
T  28384995 gacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgttcagtatccgtgttcgt 28385094  T
Q  396 atccgtg 402  Q
    |||||||    
T  28385095 atccgtg 28385101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 34897149 - 34897091
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||| |||||| | ||||||||||||||||||||||||| |||||||||||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagc 34897091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 20679396 - 20679465
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||||||||||||   ||||| |||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagt 20679465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 404
Target Start/End: Original strand, 4786336 - 4786441
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtc 392  Q
    |||||||||||||| | ||||||||||||||||||||||||| | |||||||||    ||||||| |||||      |||| |||| |||||||||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtca------gtgtcgtgttcggtgtcagtgtc 4786429  T
Q  393 cgtatccgtgct 404  Q
     |||||||||||    
T  4786430 tgtatccgtgct 4786441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 41838131 - 41838199
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||||||| || ||||||||||||||||||||| |||||||||||| ||||| | ||||||| |||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgt 41838199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 11927086 - 11927137
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||| | ||||||||||||||||||||||||| |||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 11944724 - 11944641
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgt 378  Q
    |||||||||||| | |||||||||||| |||||||||||| ||||||||||| |  ||||||| ||| || |||||||| ||||    
T  11944724 cgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgt 11944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 21465471 - 21465412
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    ||||||| |||||||||||||||  ||||||| |||||||||||||||||||||| ||||    
T  21465471 cgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 29447111 - 29447162
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 29447162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 7442902 - 7442828
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||| |||||||||||||||||||||||||| ||||| | |||||||||||  ||| ||||||| ||| |||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgtccgt 7442828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 33405378 - 33405435
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||| | |||||||||| ||||||||| |||| |||||||||||    
T  33405378 cgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 371
Target Start/End: Complemental strand, 22204710 - 22204622
Alignment:
Q  285 cacacgtgtccgacaccgacacttgtaattacactgaattatgt-gat-tttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |  || ||||| |||||||||| | ||||||| ||||||| |||||    
T  22204710 cacacgtgtctgacactgacacttgtaattacactgaattatatatatattttttaaattattagttgtgtcggcgtgtcagtgtccgt 22204622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 27101577 - 27101506
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    |||||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||  ||||||| |||||    
T  27101577 tgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 30271247 - 30271287
Alignment:
Q  287 cacgtgtccgacaccgacacttgtaattacactgaattatg 327  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  30271247 cacgtgtccgacaccgacacttgtaattacactgcattatg 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 14134757 - 14134706
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||  | ||||||||||||||||||||||||| ||||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 12606797 - 12606882
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||||| |||||       | |||| ||||||||||| | |||||||| |||||||| ||||||| |||||||||||||    
T  12606797 agcacggacactcctcggatcaggcg-------cttgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagc 12606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 17468508 - 17468558
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 345  Q
    ||||||| |||||||||||||||| | |||||||||||||| |||||||||    
T  17468508 cgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatt 17468558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 25172698 - 25172776
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||||| | |||||||| | || ||||| ||||| |||||||||||||  |||| |||| |||||||||||||    
T  25172698 cgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtatccgtgt 25172776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 28745557 - 28745471
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||| ||||| ||||| ||||| |||||||||||| |||||||||||||||||  |||||   | ||| ||||||||| |||||||    
T  28745557 cgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgtcgatgtatcattatccgtgtcgtgtccg 28745471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 404
Target Start/End: Complemental strand, 36934714 - 36934620
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |||||||| ||||||||||||||||||| ||||||||||  ||||| | ||| ||| ||||||| ||||  |||||  || ||||||||| ||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgtttgtatccgtatccatgct 36934620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 3677850 - 3677761
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    |||||| ||||||| || | ||||||||  ||||||||||||||||| |||||||||  | |||||   ||||||||||||||| |||||    
T  3677850 gtgtccaacaccgatacatataattacatagaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtc 3677761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 7658520 - 7658415
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    |||||||||  | ||||||||||||||||||| ||||| ||||||||||||   ||||||| | ||  | || ||||||| |||| |||| |||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgtatcgatgtctgtgttgtatccgatgtccgtgtccgta 7658421  T
Q  397 tccgtg 402  Q
    | ||||    
T  7658420 ttcgtg 7658415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 11833963 - 11833888
Alignment:
Q  256 agcacggacactcctcggattaggcgtg---tcacacgtgtccgacaccgacacttgtaattacactgaattatgt 328  Q
    ||||| ||||||||||||||||||||||   | ||| |||||||||||| |||| | |||||||||||||| ||||    
T  11833963 agcacagacactcctcggattaggcgtgtaattacatgtgtccgacaccaacacatataattacactgaatcatgt 11833888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 26434244 - 26434187
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||| |||||||||||| |||||| | |||||||||||||||| ||||| ||||||    
T  26434244 gtgtccaacaccgacacttttaattatattgaattatgtgattttctcaaactattag 26434187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 9414869 - 9414945
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||| |||||| |||||| ||||| ||||||||||||||||| |||  ||||||||  | |||||| ||||||||    
T  9414869 cgtgtctgacaccaacacttataattgcactgaattatgtgattatttttaattattaattatgtcggtatgtcagt 9414945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 12985456 - 12985400
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||  | | |||||| |||||||||||||||| |||||||||||    
T  12985456 gtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 39954294 - 39954346
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||||| |||||||||||||| |||||||||||||  ||||||| ||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 44694851 - 44694791
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    ||||| || |||||||||||||| || |||||||||||||||| |||||||| ||| ||||    
T  44694851 ccgacgccaacacttgtaattacgcttaattatgtgattttttaaaattatttgctgtgtc 44694791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 26902175 - 26902214
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 31109509 - 31109596
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||| |||||||||| ||||| | || ||| |||||||| | ||||||| ||||||||||| |  ||||||| ||||||| |||||||    
T  31109509 acacatgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgt 31109596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 34223002 - 34222900
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatc 398  Q
    |||||||| | |||||||||| |||||||||||||| | |||||||||||  ||| ||| |||| || | ||||| ||||||| | || |||||| ||||    
T  34223002 accgacacatataattacacttaattatgtgattttattaaattattagcgatgttggc-tgtcggtgttcgtgtcgtgtccgatttccgtgtccatatc 34222904  T
Q  399 cgtg 402  Q
    ||||    
T  34222903 cgtg 34222900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 4611578 - 4611540
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  4611578 taattacactgaattatgttattttctcaaattattagc 4611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattt 333  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 14731756 - 14731718
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  14731756 taattacactaaattatgtgattttctcaaattattagc 14731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 31580124 - 31580178
Alignment:
Q  292 gtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| |||||| | |||||||||| |||||||||||||| | |||||||||    
T  31580124 gtccgacatcgacacctataattacactcaattatgtgattttcttaaattatta 31580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 43737805 - 43737922
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc--atgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||    ||   |||||| || ||||   |||| || ||||||| ||||||||||||    
T  43737805 cgtgtccgacaccgacacatataattacactgtattttgtgattttcaagaaaatttagctgtgccggcgtgtgtcggtgtccgtgtcgtgtccggtgtc 43737904  T
Q  387 agtgtccgtatccgtgct 404  Q
     ||||| |||||||||||    
T  43737905 cgtgtctgtatccgtgct 43737922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 11803316 - 11803267
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||| |||| | ||||||||||||||||||||||||| | |||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 12936517 - 12936570
Alignment:
Q  321 aattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgtt 374  Q
    |||||||||||||| ||||||||||| |  ||||| | ||||||||||||||||    
T  12936517 aattatgtgattttatcaaattattaacaatgtcgacgtgtcagtatccgtgtt 12936570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 13203685 - 13203648
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  13203685 taattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 15023255 - 15023288
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattat 326  Q
    ||||||| ||||||||||||||||||||||||||    
T  15023255 tccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 18067954 - 18067987
Alignment:
Q  315 acactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||||| |||||||||||||    
T  18067954 acactgaattatgtgattttctcaaattattagc 18067987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 346
Target Start/End: Complemental strand, 28642457 - 28642416
Alignment:
Q  305 acttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||| |||||||||||||||| | |||||||||||||||    
T  28642457 acttgtagttacactgaattatgtaaatttttcaaattatta 28642416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 31109464 - 31109493
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  31109464 agcacggacactcctcggattaggcgtgtc 31109493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 3025664 - 3025632
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcaca 288  Q
    ||||||||||||||||||||||| |||||||||    
T  3025664 agcacggacactcctcggattagccgtgtcaca 3025632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 16867205 - 16867259
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatg---tgattttttcaaattatta 346  Q
    |||||||||||||| |||||||||| |||||||   | |||||||||||||||||    
T  16867205 cgacaccgacacttataattacactaaattatgttattattttttcaaattatta 16867259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 18646236 - 18646180
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||| |||  | | |||||||||||| |||| |||||||||||||||||    
T  18646236 gtgtccgacaccaacatatatgattacactgaatcatgtcattttttcaaattatta 18646180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 22493536 - 22493504
Alignment:
Q  312 attacactgaattatgtgattttttcaaattat 344  Q
    ||||||||||||||||||||||||| |||||||    
T  22493536 attacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 349
Target Start/End: Original strand, 35519833 - 35519861
Alignment:
Q  321 aattatgtgattttttcaaattattagct 349  Q
    |||||||||||||||||||||||||||||    
T  35519833 aattatgtgattttttcaaattattagct 35519861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 6e-47; HSPs: 111)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 21191051 - 21191158
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  21191051 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagt 21191150  T
Q  390 gtccgtat 397  Q
    ||||||||    
T  21191151 gtccgtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 263 - 404
Target Start/End: Original strand, 13287366 - 13287508
Alignment:
Q  263 acactcctcggattaggcgtgtcacacgtgtc-cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgt 361  Q
    ||||||||| |||||||||||||  ||  | | ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| | |||    
T  13287366 acactcctcagattaggcgtgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgt 13287465  T
Q  362 cagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
     ||| ||||||| |||||||||||| |||||||||||||||||    
T  13287466 tagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgct 13287508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 21522809 - 21522700
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||||| ||||||| |||||||||| | |||||||    
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21522710  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  21522709 tatccgtgct 21522700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 21533375 - 21533266
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||||| ||||||| |||||||||| | |||||||    
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21533276  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  21533275 tatccgtgct 21533266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 6247723 - 6247590
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcaca---cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctg 352  Q
    ||||| |||||| ||||||||||| ||||| |    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  6247723 agcacagacacttctcggattaggtgtgtcccgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtg 6247624  T
Q  353 tcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||| ||||||| | ||| | ||||||||||||    
T  6247623 tcggcgtgtcagtgtgcgtatcgtgtccggtgtc 6247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 15382539 - 15382427
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgatttttt--caaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    |||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||| ||||||| ||||| | ||||||| |||||||||||| ||||    
T  15382539 ccgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgt 15382440  T
Q  392 ccgtatccgtgct 404  Q
    |||||||||||||    
T  15382439 ccgtatccgtgct 15382427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 19579760 - 19579651
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||| | ||||| |||||||||| ||||||||| |||| ||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacg 19579661  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  19579660 tatccgtgct 19579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 404
Target Start/End: Original strand, 6326259 - 6326406
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||||| |||| |||||||||||  |  ||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| ||||  |||||    
T  6326259 agcacggacacttctcgaattaggcgtgttccg-gtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcg 6326357  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    || ||||||| ||||||| ||||||||| || |||||| ||||| ||||    
T  6326358 gcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgct 6326406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 256 - 384
Target Start/End: Original strand, 24906258 - 24906390
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcaca----cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctct 351  Q
    ||||||||||||||||| ||||||||||||  |    | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || |    
T  24906258 agcacggacactcctcgaattaggcgtgtcctattgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgt 24906357  T
Q  352 gtcggcatgtcagtatccgtgttgtgtccggtg 384  Q
    || ||| ||||||| | ||||| ||||||||||    
T  24906358 gttggcgtgtcagtgttcgtgtcgtgtccggtg 24906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 400
Target Start/End: Complemental strand, 21542089 - 21541984
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||||||||||||||||||||| || |||| |||||||||| | ||||||||||||| | || |||| ||||| |||||| |||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtctggtgtccgtgtccg 21541990  T
Q  395 tatccg 400  Q
    ||||||    
T  21541989 tatccg 21541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 14674323 - 14674250
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 14674250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 21576739 - 21576799
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagct 349  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576739 cgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagct 21576799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 371
Target Start/End: Complemental strand, 39698600 - 39698524
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 8420089 - 8420018
Alignment:
Q  292 gtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtca 8420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 15884084 - 15883984
Alignment:
Q  262 gacactcctcggattaggcgtgtcaca----cgtgtccgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcgg 356  Q
    |||||||||||||||||||||||  ||    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| ||||||    
T  15884084 gacactcctcggattaggcgtgttccagtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgtcgg 15883985  T
Q  357 c 357  Q
    |    
T  15883984 c 15883984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 404
Target Start/End: Original strand, 17177025 - 17177132
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||||||||| ||| ||| | ||||| |||| || || || |||||| |||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgta 17177124  T
Q  397 tccgtgct 404  Q
    ||||||||    
T  17177125 tccgtgct 17177132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 33178089 - 33178014
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||| |||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 401
Target Start/End: Complemental strand, 30183608 - 30183502
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||||||||||||| || |||| ||||||| ||||||||||||||| | ||||||||| ||||| || || |||||||  ||||| |||||||    
T  30183608 cgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcggcatatcagtgtctgtattgtgtctagtgtctgtgtccg 30183509  T
Q  395 tatccgt 401  Q
    |||||||    
T  30183508 tatccgt 30183502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 31084382 - 31084312
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  31084382 cgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 41633794 - 41633708
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||  |||||||||| |||| |||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtccg 41633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 42893424 - 42893358
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  42893424 gtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcgg 42893358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 10298663 - 10298553
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    ||||||||||||||||||||||||||||||  |    | ||||||||||||||||||||||| || ||||||||| |||||||||||||||| | |||||    
T  10298663 agcacggacactcctcggattaggcgtgtccga----tacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 10298568  T
Q  356 gcatgtcagtatccg 370  Q
    || ||| ||| ||||    
T  10298567 gcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 295 - 395
Target Start/End: Original strand, 37328844 - 37328944
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||| ||| ||||||  | ||||| ||||||| |||| ||||||| |||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtccgtgtccg 37328943  T
Q  395 t 395  Q
    |    
T  37328944 t 37328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 4105310 - 4105228
Alignment:
Q  303 acacttgtaattacactgaattatgtgat--tttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggt 383  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| | ||||||| |||||||||||||||  ||||||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggt 4105228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 16203791 - 16203898
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtg 390  Q
    |||||||||||||||| | |||||||||| ||||||| |||||| |||||||||||||  ||||||||||| ||| |||||||  ||| ||||||| |||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgtg 16203890  T
Q  391 tccgtatc 398  Q
    || |||||    
T  16203891 tctgtatc 16203898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 404
Target Start/End: Complemental strand, 41995525 - 41995421
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtat 397  Q
    |||||||||||  ||||||| ||||||||||||||||||| ||||||||| | ||||||| ||||||| || |||| || ||| ||||| ||||||||||    
T  41995525 caccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtat 41995428  T
Q  398 ccgtgct 404  Q
    |||||||    
T  41995427 ccgtgct 41995421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 43001856 - 43001781
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||| |||||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgt 43001781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 7218271 - 7218341
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatcc 369  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | |||| ||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtcgacgtgtccgtatcc 7218341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 7677764 - 7677703
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 395
Target Start/End: Complemental strand, 22013458 - 22013373
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    |||||||||| |||||||| |||||| ||||||||||||| ||||||| ||||||| ||||||| |||||||||||| || |||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 22013373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 36642763 - 36642870
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||||||||||| || ||||||| || ||||| | ||||||||||||||| || ||||||| ||||||| ||||||| ||||||||||||  |||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc-ttgtccgt 36642861  T
Q  396 atccgtgct 404  Q
    |||| ||||    
T  36642862 atccatgct 36642870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 3966562 - 3966492
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||| | ||||||||||||||| ||||||||| |||||||||||||  |||||||||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 363
Target Start/End: Original strand, 28588668 - 28588742
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| |  ||||||| |||||    
T  28588668 cgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 30135372 - 30135286
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||| | ||||||| |||| ||||| |||| |||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtccg 30135286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 21351906 - 21351975
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||  |||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagt 21351975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 30502382 - 30502441
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||||    
T  30502382 cgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagc 30502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 30542725 - 30542784
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||||    
T  30542725 cgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagc 30542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 43564946 - 43564891
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  43564946 cgtgtccgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 384
Target Start/End: Original strand, 19552562 - 19552632
Alignment:
Q  314 tacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtg 384  Q
    |||||| |||||||||||||||||||||||||| || ||||||| ||||||| ||||||| |||| |||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtg 19552632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 395
Target Start/End: Original strand, 19820391 - 19820494
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    ||||||||||||||||||| |||||  ||| |||||||  ||||| |||||||||||||  ||||||  ||||||| ||||||| |||||||||||| ||    
T  19820391 gtgtccgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgt 19820488  T
Q  390 gtccgt 395  Q
     |||||    
T  19820489 atccgt 19820494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 381
Target Start/End: Complemental strand, 14422967 - 14422877
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||||  |||||||||||| | ||||  ||||||| ||| ||| |||||||    
T  14422967 cgtgtccgacatcgaaacttataattacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtccttgtcgtgtccg 14422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 16304440 - 16304533
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||| |||||| |||||| ||||||| || |||  ||||||| ||||||||||  ||| |||||||||||| |||||||||||| ||||    
T  16304440 aattacactaaattatatgatttattcaaataatcagcggtgtcggcgtgtcagtatctatgtcgtgtccggtgtcggtgtccgtatccctgct 16304533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 6770606 - 6770493
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||| ||||| |  || ||||||||||||||||||||| | |||||||||| | |||| |  ||||||| |||||||  ||| ||||||| |    
T  6770606 cgtgtccgacactgacacat--aagtacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccg 6770509  T
Q  389 tgtccgtatccgtgct 404  Q
    | ||||||||||||||    
T  6770508 tatccgtatccgtgct 6770493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 22299492 - 22299571
Alignment:
Q  306 cttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||| ||||||| |||||||||||| |||||||||||| ||||||  ||||| ||||||||| || |||||||||    
T  22299492 cttgtaattatactgaatcatgtgatttttt-aaattattagctgtgtcggtgtgtcaatatccgtgtcgtatccggtgtc 22299571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 27932300 - 27932232
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    ||||||||||||| | | |||||||||||||||||||||| ||||| |||||||||||||  |||||||    
T  27932300 cgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggc 27932232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 22423770 - 22423895
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc---acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctg 352  Q
    ||||||||||||||||||||||||||||||   ||||     |||||||||||  | |||||| | |||||||||||||||| ||||||||||||   ||    
T  22423770 agcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtg 22423869  T
Q  353 tcggcatgtcagtatccgtgttgtgt 378  Q
    || |  ||||||||||||||| ||||    
T  22423870 tcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 11685998 - 11685928
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||| | |||||||||| ||||||| || ||| |||||||||||||  |||||||||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 6401557 - 6401448
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | ||||||||||| ||| ||||||||| | |||   |||| | ||||||| |||| || ||||||| | |||||||||| ||||| |    
T  6401557 cgacaccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtccgtgtctg 6401458  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  6401457 tatccgtgct 6401448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 6471889 - 6471942
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||| |||| | ||||||||||||||||||||||||| |||||||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 15405062 - 15405107
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattag 15405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 26312834 - 26312737
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||| || | ||||||||||||||||  ||||||| |||||||||| ||  | ||||||| ||||| ||| ||| |||||| |||||    
T  26312834 cgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtccatgtcgtgtccagtgtc 26312737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 2548451 - 2548395
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| || ||||||||    
T  2548451 gtgtccgacaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 34879415 - 34879331
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||| |||||| | | ||||||||||||||| ||||||| ||||||| |||||  || |||| |||| ||||||||||    
T  34879415 cgtgtccgacatcgacacatattattacactgaattatatgattttctcaaatttttagcggtgccggcgtgtccgtatccgtgt 34879331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 40131680 - 40131628
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||| | || |||||| |||||||||||||||||||||||||||||||    
T  40131680 cgacaccgatatttataattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 18421835 - 18421890
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    |||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||||    
T  18421835 cgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 42469263 - 42469180
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    |||||||| || ||||| ||||| ||||||||||| |  ||||||| ||||| ||||||||| |||| ||||||| ||||||||    
T  42469263 attacactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgt 42469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 2436981 - 2436911
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||| | |||| |||  |||||||||||||||| ||||||||||||  ||||||| |||||||    
T  2436981 cgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagt 2436911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 21137727 - 21137657
Alignment:
Q  316 cactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||| || ||||| ||| ||||||| |  ||||||| ||||||| ||||||||||||||||||||    
T  21137727 cactgaattacgtcattttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtc 21137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 23015995 - 23016100
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc--ggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatc 398  Q
    |||||| | ||||||||||||||||||||||||| |||||| |||| |  ||||   |  |||| || ||||||| |||||||| ||| |||||||||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaatgattaacgatgtcagagagtgtcggtgtccgtgtcgtgtccggagtccgtgtccgtatc 23016094  T
Q  399 cgtgct 404  Q
    ||||||    
T  23016095 cgtgct 23016100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 40000555 - 40000613
Alignment:
Q  315 acactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||||||||||||||||||||    ||||| ||||||||| |||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgt 40000613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 346
Target Start/End: Original strand, 5467984 - 5468029
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 12199989 - 12199948
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  12199989 cgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 23221046 - 23220973
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcag 364  Q
    ||||| |||||||||| | | || ||||| |||||||||||||| |||||||||||||  ||||| ||||||||    
T  23221046 tgtccaacaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 32426832 - 32426908
Alignment:
Q  257 gcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    ||||||||||||||||||| |||||| || | |||||  |||||||||||   |||||||| ||||||||||||||||    
T  32426832 gcacggacactcctcggataaggcgtatccc-cgtgttagacaccgacacaaataattacaatgaattatgtgatttt 32426908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 36838602 - 36838549
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| | |||||||||| |||||||| ||||| |||||||||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattattagc 36838549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 41091257 - 41091310
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||| |||||| | ||||||||||||||||||||||||| |||||| ||||||    
T  41091257 cgacatcgacacatataattacactgaattatgtgattttctcaaatcattagc 41091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 5894833 - 5894885
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||||||||| ||| | | |||||| ||||||||||||||||||||    
T  5894833 cgacaccgacacttgtagttagattaaattatatgattttttcaaattattag 5894885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 17123113 - 17123009
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||| |||||||||  | |||||  |||  ||||||||||||| |||||||||||||  ||| ||| ||||||| ||| |||| |||||| |||| |    
T  17123113 cgtgtccaacaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccg 17123014  T
Q  389 tgtcc 393  Q
    |||||    
T  17123013 tgtcc 17123009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 25888293 - 25888404
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtga--ttttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtc 392  Q
    |||||| || |||| ||||||||||||||||| |||  |||||| ||||||||||   ||| ||  |||| |||||||||| |||||| ||||| |||||    
T  25888293 cgacacggagacttataattacactgaattatatgattttttttaaaattattagtagtgttggtgtgtctgtatccgtgtcgtgtcctgtgtccgtgtc 25888392  T
Q  393 cgtatccgtgct 404  Q
     | |||||||||    
T  25888393 tggatccgtgct 25888404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 38464371 - 38464431
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    ||||||| ||||| || ||||| |||||||||| |||||||||||| | ||||||||||||    
T  38464371 gacacttataatttcaatgaataatgtgattttctcaaattattagttgtgtcggcatgtc 38464431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 131816 - 131766
Alignment:
Q  301 cgacacttgtaattacactgaattat--gtgattttttcaaattattagct 349  Q
    |||| |||||||||||||| ||||||  |||||||||||||||||||||||    
T  131816 cgacgcttgtaattacacttaattatatgtgattttttcaaattattagct 131766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 16374342 - 16374393
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||| |||||||||||||| |||||| |||||||  ||||||||    
T  16374342 cgacaccgacacatgtaattacactgatttatgttatttttttcaattatta 16374393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 23012402 - 23012461
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||| |||||||||| | |||||||| | |||||| ||||||| |||||||||||||    
T  23012402 cgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 26716178 - 26716135
Alignment:
Q  320 gaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    ||||||||||||||| |||||||||||||  |||||||||||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtca 26716135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 26985918 - 26985875
Alignment:
Q  320 gaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    ||||||||||||||| |||||||||||||  |||||||||||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtca 26985875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 365
Target Start/End: Complemental strand, 27144507 - 27144452
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||| |||||||||||||  |||||||||||||  ||||||| |||||||    
T  27144507 taattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 41995577 - 41995531
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccga 303  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||    
T  41995577 agcacggacactcctaggattaggcgtgtc-ctcgtgtccgacaccga 41995531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 346
Target Start/End: Complemental strand, 4344784 - 4344750
Alignment:
Q  312 attacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||| |||||||||||||||||    
T  4344784 attacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 402
Target Start/End: Original strand, 15410465 - 15410555
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtg 402  Q
    |||||||||||| || | ||||| | |||||||||||  ||||||| ||||||| ||||||| ||||| | ||||   |||||||||||||    
T  15410465 attacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgatgtccacgtccgtatccgtg 15410555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 17088337 - 17088291
Alignment:
Q  302 gacacttgtaattacactgaattatgtgatt-ttttcaaattattag 347  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||    
T  17088337 gacacttgtaatcacactaaattatgtgatttttttcaaattattag 17088291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 17593737 - 17593775
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  17593737 taattacactgaattacgtgattttctcaaattattagc 17593775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 4105372 - 4105343
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  4105372 agcacggacactcctcggattaggcgtgtc 4105343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 10010617 - 10010568
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 340  Q
    ||||| |||||||||| ||| |||||| |||||||||| |||||||||||    
T  10010617 tgtcccacaccgacacatgtgattacaatgaattatgtcattttttcaaa 10010568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 12641733 - 12641652
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgt 376  Q
    |||||| ||||| || ||||| ||| |||||||||||||||| ||||||||| || ||||| | ||||| | ||||| ||||    
T  12641733 cgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgtcattgtccgtattgt 12641652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 14873635 - 14873606
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  14873635 agcacggacactcctcggattaggcgtgtc 14873606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 17123160 - 17123131
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  17123160 agcacggacactcctcggattaggcgtgtc 17123131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 344
Target Start/End: Complemental strand, 19438386 - 19438353
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattat 344  Q
    |||||||||||||||||||||||| |||||||||    
T  19438386 aattacactgaattatgtgattttctcaaattat 19438353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 20683368 - 20683331
Alignment:
Q  367 tccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  20683368 tccgtgtcgtgtccggtgtccgtgtccgtatccgtgct 20683331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 21191002 - 21191031
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  21191002 agcacggacactcctcggattaggcgtgtc 21191031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 21576691 - 21576720
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  21576691 agcacggacactcctcggattaggcgtgtc 21576720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 22611761 - 22611810
Alignment:
Q  319 tgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatc 368  Q
    |||||||||||||||||||||||||||||   ||||||| |||| |||||    
T  22611761 tgaattatgtgattttttcaaattattaggagtgtcggcgtgtctgtatc 22611810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 343
Target Start/End: Original strand, 24273045 - 24273078
Alignment:
Q  310 taattacactgaattatgtgattttttcaaatta 343  Q
    ||||||||||||||||||||||||| ||||||||    
T  24273045 taattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 343
Target Start/End: Complemental strand, 24389169 - 24389136
Alignment:
Q  310 taattacactgaattatgtgattttttcaaatta 343  Q
    ||||||||||||||||||||||||| ||||||||    
T  24389169 taattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 25863257 - 25863212
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| ||||||||||||||||| | ||||| |||||||||||    
T  25863257 cgacacttataattacactgaattatatcattttctcaaattatta 25863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 28262411 - 28262492
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    ||||||| || |||||||||||||| ||||||||| | |  | | ||| |||||||||||||||||| || |||||| ||||    
T  28262411 taattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtatccgtgttgtatctggtgtcggtgt 28262492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 31264491 - 31264446
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| | ||||||||||||||||| ||||| |||||||||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 35017081 - 35017044
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  35017081 taattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 35017156 - 35017127
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  35017156 agcacggacactcctcggattaggcgtgtc 35017127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 38749565 - 38749614
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||| |||| | |||||||| |||||||||| |||||||||||||||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 39268544 - 39268573
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  39268544 agcacggacactcctcggattaggcgtgtc 39268573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 39698665 - 39698636
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  39698665 agcacggacactcctcggattaggcgtgtc 39698636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 42029817 - 42029772
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    ||||||||||||||| || | |||||||| ||||||||||||||||    
T  42029817 cgtgtccgacaccgatacatataattacattgaattatgtgatttt 42029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 43001918 - 43001889
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  43001918 agcacggacactcctcggattaggcgtgtc 43001889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 380
Target Start/End: Original strand, 6072339 - 6072399
Alignment:
Q  321 aattatgtgatt-ttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtcc 380  Q
    |||||||||||| |||| |||||||||| | ||||||| ||||||||||||| | ||||||    
T  6072339 aattatgtgattgttttaaaattattagttatgtcggcgtgtcagtatccgtatcgtgtcc 6072399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 7997162 - 7997217
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||| ||||||| ||||||||||| ||||| | ||||| |||||||||||    
T  7997162 gtgtccgacac-gacacttataattacactgtattatatcattttctcaaattatta 7997217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 347
Target Start/End: Complemental strand, 12160007 - 12159959
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||| ||||||||||| | ||||||||| |||||| ||||||||||    
T  12160007 accgacatttgtaattacattaaattatgtgttttttttaaattattag 12159959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #107
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 14873575 - 14873527
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    ||||||||||| | |||||||||| ||||||||| |||| |||||||||    
T  14873575 gacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #108
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 17925167 - 17925223
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||| |||||||||||| | | |||||| |||||||||||||||| | |||||||||    
T  17925167 gtgttcgacaccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #109
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 19028999 - 19029039
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    ||||| ||||||||| ||||||||| |||||||||||||||    
T  19028999 gacacagacacttgtgattacactggattatgtgatttttt 19029039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #110
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 30098370 - 30098334
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| |||||||||||||||| |||||||||||    
T  30098370 taattacattgaattatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #111
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Original strand, 33035816 - 33035852
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  33035816 taattacactgaattatatgatttattcaaattatta 33035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 9e-43; HSPs: 120)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 256 - 404
Target Start/End: Complemental strand, 7938213 - 7938066
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||||||||||||| ||||||||| |  ||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||||| |||||    
T  7938213 agcacggacactcctcggatcaggcgtgtctcg-gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcg 7938115  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    || ||||||| ||| ||| |||||||||||| |||||||||||||||||    
T  7938114 gcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgct 7938066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 290 - 404
Target Start/End: Original strand, 7977825 - 7977939
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||| |||||| ||||| ||    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T
Q  390 gtccgtatccgtgct 404  Q
    |||| ||||||||||    
T  7977925 gtccatatccgtgct 7977939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 16766756 - 16766647
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| |||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccg 16766657  T
Q  395 tatccgtgct 404  Q
    ||||| ||||    
T  16766656 tatccatgct 16766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 8776967 - 8777082
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| | ||||||| ||||||| ||||||| ||||||| |||| |    
T  8776967 cgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccg 8777066  T
Q  389 tgtccgtatccgtgct 404  Q
    ||||||||||||||||    
T  8777067 tgtccgtatccgtgct 8777082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 9107370 - 9107479
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||| ||| ||||||| |||||||||||| ||||| |    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcag 9107469  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  9107470 tatccgtgct 9107479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 34595199 - 34595102
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| | ||||||| ||||||||||||    
T  34595199 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 34595102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 426508 - 426623
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| || ||||||| ||||||| ||||||| ||||||||| || |    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccg 426607  T
Q  389 tgtccgtatccgtgct 404  Q
    |||| |||||| ||||    
T  426608 tgtctgtatccatgct 426623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 293 - 395
Target Start/End: Original strand, 853857 - 853959
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtc 392  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||| |||||| |||||||| |||||||||||| || ||    
T  853857 tccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatc 853956  T
Q  393 cgt 395  Q
    |||    
T  853957 cgt 853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 17841583 - 17841667
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  17841583 cgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 17841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 28152163 - 28152080
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| |||||||    
T  28152163 cgtgtccgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtccgtgt 28152080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 12696383 - 12696297
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||| |||||||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 12696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 295 - 395
Target Start/End: Original strand, 8365519 - 8365619
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||| ||||||| ||||||| ||||| |||||| || ||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccg 8365618  T
Q  395 t 395  Q
    |    
T  8365619 t 8365619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 401
Target Start/End: Complemental strand, 28715360 - 28715256
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        | ||||||| ||||| | |||||||||||| |    
T  28715360 cgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagc--------cgtgtcagtgtccgtatcgtgtccggtgtccg 28715269  T
Q  389 tgtccgtatccgt 401  Q
    |||||||||||||    
T  28715268 tgtccgtatccgt 28715256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 10770674 - 10770760
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||||| ||| ||| |||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccg 10770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 9027237 - 9027128
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | ||||||||| ||||||||||||| | |||||||||||||  ||||||| ||||||| ||||||| |||||||| ||| |||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccg 9027138  T
Q  395 tatccgtgct 404  Q
    |||| |||||    
T  9027137 tatcggtgct 9027128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 10294166 - 10294057
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | |||||||| |||| |||| |||| | |||||||||||||  | ||||||||||||||||||||| |||||||||||  |||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccg 10294067  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  10294066 tatccgtgct 10294057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 381
Target Start/End: Complemental strand, 16833365 - 16833281
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||| || |||| |||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 1681811 - 1681708
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccg 400  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||| ||| |  |||| |||| ||||||| ||||| |||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccg 1681712  T
Q  401 tgct 404  Q
    ||||    
T  1681711 tgct 1681708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 3209442 - 3209332
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtc 392  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||||||| |||| || | ||||| |||||||||||| ||||     
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccggtgtccgtgtt 3209344  T
Q  393 cgtatccgtgct 404  Q
     |||||||||||    
T  3209343 tgtatccgtgct 3209332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 7930364 - 7930273
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||||  | ||||||||||||||| |||||  |||||||||||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtc 7930273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 4878008 - 4877918
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgt 378  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||  ||||| ||||||||| ||||    
T  4878008 cgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 31384979 - 31384870
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | | ||  |||| |||||||||| |  ||| ||||||| || ||||    
T  31384979 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagttgtatcaacatgccagtatccgtatcatgttcggtgtccgtatccg 31384880  T
Q  395 tatccgtgct 404  Q
    ||| ||||||    
T  31384879 tattcgtgct 31384870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 33001283 - 33001375
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||||| ||||| |  ||||||||||||||    
T  33001283 cgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtccg 33001375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 5732504 - 5732619
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||| | |||||||||| || ||||||||||| ||||||||||| |  ||||||| ||||||| ||| ||| |||||| ||||| |    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccg 5732603  T
Q  389 tgtccgtatccgtgct 404  Q
    |||| |||||| ||||    
T  5732604 tgtctgtatccatgct 5732619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 7801155 - 7801218
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggc 7801218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 32978893 - 32978972
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtg-attttttcaaattattagctctgtcggcatgtcagtat 367  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||| |||| ||||    
T  32978893 cgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcgtgtccgtat 32978972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 403857 - 403915
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  403857 acgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 19040417 - 19040339
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtat 367  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||||    
T  19040417 cgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 365
Target Start/End: Complemental strand, 31959263 - 31959148
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacac-------cgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||||||||| ||||| |  ||||| |||||       |||||||||||||||||||| |||||||||||||||||||||||||||    
T  31959263 agcacggacactcctcggattaggtgtgtcccg-gtgtcggacacatgtcgccgacacttgtaattacactgcattatgtgattttttcaaattattagc 31959165  T
Q  349 tctgtcggcatgtcagt 365  Q
    | || |||| |||||||    
T  31959164 tgtgacggcgtgtcagt 31959148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 404
Target Start/End: Original strand, 4118341 - 4118442
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtg 402  Q
    ||||||||||||||| | |||||||||||||||||||||||||| || | ||| | ||| | ||| ||||| |||||||||||| ||||||||||| |||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattattaactatatcgtcgtgttaatatacgtgtcgtgtccggtgtccgtgtccgtatcagtg 4118440  T
Q  403 ct 404  Q
    ||    
T  4118441 ct 4118442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 391
Target Start/End: Complemental strand, 9629443 - 9629346
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    ||||||||||||| | |||||||| |||||||||||||||| |||||||||| ||  ||||||| ||||| ||||||||| |||||| ||||| ||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgtgt 9629346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 24645546 - 24645469
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  24645546 cgtgtctgacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtcgacatgtcagt 24645469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 1191694 - 1191762
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  1191694 cgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggc 1191762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 290 - 370
Target Start/End: Original strand, 7265588 - 7265668
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccg 370  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||  ||| ||| ||||||| ||||    
T  7265588 gtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 15489733 - 15489840
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||||||| | ||||| | ||| ||| |||||||||||||  ||| | |||||||     
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtcatgtg-ccgtgtccgc 15489831  T
Q  396 atccgtgct 404  Q
    |||||||||    
T  15489832 atccgtgct 15489840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 3398677 - 3398595
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgt 378  Q
    ||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||| ||||||| ||||    
T  3398677 cgacaccgatacttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 21924907 - 21924997
Alignment:
Q  266 ctcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    |||||||||||||||||||| |  ||||||||||||||||| | ||||||||||||||||| |||| || |||||||||||||  |||||||    
T  21924907 ctcctcggattaggcgtgtcccg-gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggc 21924997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 34073347 - 34073438
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||| | | |||||||||||||||||| |||||| |||||||||||||  ||| ||||||||||| ||||||| |||||| |||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtc 34073438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 5970108 - 5970211
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||||| |      || |||||||  ||||||||||| |||||||    
T  5970108 cgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgac------gtgtccgtgtcatgtccggtgtccgtgtccg 5970201  T
Q  395 tatccgtgct 404  Q
    |||| |||||    
T  5970202 tatctgtgct 5970211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 6898275 - 6898333
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||    
T  6898275 cgtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 9522948 - 9522898
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 7086898 - 7086801
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtc-----cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||| |||||||||||||||| |||| ||||||||     | |||||||||| | |||||||||| |||||||||||||| |||||||||||||    
T  7086898 agcacggaaactcctcggattaggcatgtctcacgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 9025451 - 9025547
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtc-----cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| ||||||||||||||||| |  |||||     |||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  9025451 agcacggacacttctcggattaggcgtgtcccg-gtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 18367895 - 18367787
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | ||||||||||| ||| ||||||||| | |||  ||||||| ||||||| |||| || ||| ||| |||||||||||| |||||||    
T  18367895 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccggtgtccgtgtccg 18367797  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  18367796 tatccgtgct 18367787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 21395308 - 21395416
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||||||||||  ||| ||| |||| || ||| |||  | ||||||||| ||||| |    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgtgtctg 21395406  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  21395407 tatccgtgct 21395416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 7378044 - 7377935
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||| | |||||||| |||||||||||||||| ||||||| |||||  ||||||       || || ||||||||||||||||| |    
T  7378044 cgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcgg------ggtgtctgtgttgtgtccggtgtctg 7377951  T
Q  389 tgtccgtatccgtgct 404  Q
     |||||||||||||||    
T  7377950 ggtccgtatccgtgct 7377935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 7996368 - 7996448
Alignment:
Q  286 acacgtgtc-cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||| |||||||||| | | ||||||||||||||||| ||||||| |||||||||||||  |||||||||||||||    
T  7996368 acacgtgtcgcgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 8022433 - 8022353
Alignment:
Q  286 acacgtgtc-cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||| |||||||||| | | ||||||||||||||||| ||||||| |||||||||||||  |||||||||||||||    
T  8022433 acacgtgtcgcgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 9911495 - 9911583
Alignment:
Q  263 acactcctcggattaggcgtgtcacacgtgtc-cgacaccgacacttgtaattacactgaattatgtgattt-tttcaaattattagct 349  Q
    |||||||||||||||||||||||     || | ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  9911495 acactcctcggattaggcgtgtcctggttgacacgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagct 9911583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 2224273 - 2224206
Alignment:
Q  307 ttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgtt 374  Q
    |||||||||||||||||||| ||||||||| ||||||||||||  |||| ||| ||||||||||||||    
T  2224273 ttgtaattacactgaattatatgatttttttaaattattagctgcgtcgacatatcagtatccgtgtt 2224206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 1700416 - 1700362
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 8805530 - 8805625
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtc-----cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||||||||||| |||| ||||||||     | ||||||||||   |||||||||| |||||||||||||| |||||||||||||    
T  8805530 agcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacac--ataattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 9658936 - 9658854
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    |||||||||  | ||||||||||||||||||||||||| | |||||||||||  ||||||| ||||||| ||||||| |||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 17435250 - 17435180
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||| | | ||||| |||||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgt 17435180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 34290092 - 34290186
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||||||||||||||||| |  ||||||||||| | ||||||||||||||| |  ||||  | ||||||||| ||||||||||| |||||    
T  34290092 taattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtcttatccggtgtctgtgtccgtatctgtgct 34290186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 395
Target Start/End: Original strand, 17341671 - 17341763
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |  ||||||| |||||||  |||||| ||| | |||||| ||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg-caggtgtctgtgtccgt 17341763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 363
Target Start/End: Original strand, 27904030 - 27904106
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtg--attttttcaaattattagctctgtcggcatgtca 363  Q
    |||||| |||||||||| |||||||||||||||||||||||   |||||| |||||||||||| ||||||| |||||    
T  27904030 cgtgtctgacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtcggcgtgtca 27904106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 6327509 - 6327569
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||| ||||||| ||||||||||||||||||| |||||| | |||||||||||||||||    
T  6327509 acacgtatccgacatcgacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 23771643 - 23771560
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||||| |||||||||||||||| ||| | ||||||| ||||||||| || ||||||| |||| || |||||||    
T  23771643 cgtgtccgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtccgtgt 23771560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 13851801 - 13851686
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||| |||| |||||| | |||||||||||||||| || ||||| |||||||||||||  ||||| | ||||||| ||||||| |||| |  |||| |    
T  13851801 cgtgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccg 13851702  T
Q  389 tgtccgtatccgtgct 404  Q
    |||||| | |||||||    
T  13851701 tgtccgaacccgtgct 13851686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 23130519 - 23130586
Alignment:
Q  335 ttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtg 402  Q
    ||||||||||||||| ||||||||||||||| || |||||||||| | |||| ||||| |||||||||    
T  23130519 ttcaaattattagctatgtcggcatgtcagtgtcagtgttgtgtctgatgtccgtgtctgtatccgtg 23130586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 26402674 - 26402721
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  26402674 cgtgtccgacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 348
Target Start/End: Original strand, 32511664 - 32511719
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||| |||||| ||||||||||||||||||||||||| | |||||||||||    
T  32511664 tccgacaccaacacttataattacactgaattatgtgattttcttaaattattagc 32511719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 363
Target Start/End: Original strand, 13364699 - 13364773
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    ||||||| |||||||||| | | ||||||||||||||| ||||||| ||||||||| |||  |||||||||||||    
T  13364699 cgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 355
Target Start/End: Original strand, 25010212 - 25010262
Alignment:
Q  305 acttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    ||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtgtcg 25010262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 31579221 - 31579276
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||    
T  31579221 cgtgtccgacaccgacacat--aattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 5000642 - 5000735
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||| ||||||| |||||||||| || ||||||||||  ||||| | |||||||||||||||  ||||||||||| ||||  ||||| |||||    
T  5000642 aattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 5000735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 8714039 - 8713978
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcg 355  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||||||||| || |||||    
T  8714039 cgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcg 8713978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 12627572 - 12627629
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||| |||||| | | ||||||||||||||||||||||||||| ||||||||    
T  12627572 gtgtccgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 326
Target Start/End: Original strand, 16388211 - 16388248
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattat 326  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16388211 cgtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 20371110 - 20371214
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | |||| ||| ||| |||||||||||| |||||||||||||  ||||||| ||||| | |||     ||||||||| || |||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtcc-----gtgtccggtttctgtgtccg 20371204  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  20371205 tatccgtgct 20371214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 34172261 - 34172180
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtat 367  Q
    ||||||||||||||||||||| | |||||  | | |||||||||||||| ||||||| ||||   |||||||||||||||||    
T  34172261 acacgtgtccgacaccgacacatataattttaattaattatgtgattttctcaaattgttagaggtgtcggcatgtcagtat 34172180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 7151471 - 7151419
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||| |||| | |||||||||| |||||||||||||||||||||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 17302609 - 17302545
Alignment:
Q  302 gacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||| | |||| || |||||||    
T  17302609 gacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagt 17302545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 19044522 - 19044426
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtc 392  Q
    ||||||||||| | |||| ||||||||||||||||| || ||||||||||||   ||||||| ||||||| ||| ||| || | |||||||| ||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgtattcggtgtcattgtc 19044426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 404
Target Start/End: Complemental strand, 25096469 - 25096373
Alignment:
Q  308 tgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||||||  ||||||||||||| ||||||||||||   ||||| | |||| || || ||||||| |||| |||| |||||||||| ||||||    
T  25096469 tgtaattacactagattatgtgattttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgttgtatccgatgtccgtgtccgtatacgtgct 25096373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 31428983 - 31429058
Alignment:
Q  274 attaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagct 349  Q
    |||||||||||| || ||||  |||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  31428983 attaggcgtgtc-catgtgttggacacctacatttgtaattacactgaattatgtgattttttttaaattattagct 31429058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 6389785 - 6389702
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    |||||||| |||||| | ||||| ||||||||||| |  ||||||| ||| ||| ||||||| |||||||||||| ||||||||    
T  6389785 attacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgt 6389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 9617493 - 9617442
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||| | |||||||| |||||||||||||||| |||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 345
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatt 345  Q
    ||||||||||||||||||||||||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 26562748 - 26562681
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    ||||| |||||| | ||||||||||||||||||||||||| ||||||| |||||  ||||||| ||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 404
Target Start/End: Complemental strand, 32299332 - 32299225
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    |||||||||| | ||| |||| |||||||||||||||| ||||||||||| |   || ||  |||||||||  ||||| |||| |||||| ||||| |||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaattattatcagggttggtgtgtcagtatttgtgttatgtctggtgtctgtgtctgta 32299233  T
Q  397 tccgtgct 404  Q
    ||||||||    
T  32299232 tccgtgct 32299225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 347
Target Start/End: Complemental strand, 2117129 - 2117083
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||| ||||| || |||||||||||||||||||||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 7027301 - 7027251
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattat 344  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattat 7027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 10842574 - 10842524
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||| ||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 35125706 - 35125612
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    ||||||| |||||||| | || ||||||||||||| ||||||| | |  ||||||| |||| || |  |||||||||||||||||||| ||||||    
T  35125706 gacacttataattacagtaaaatatgtgatttttttaaattatcaacggtgtcggcgtgtctgtgtttgtgttgtgtccggtgtcagtatccgta 35125612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 6751878 - 6751927
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 340  Q
    |||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  6751878 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 6751927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 404
Target Start/End: Original strand, 10339146 - 10339235
Alignment:
Q  315 acactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |||||||||||||||||||| |||||||| | ||  ||||||| ||||||| | | ||| |||||| |||||  |||| |||||||||||    
T  10339146 acactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccgtgct 10339235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 13360367 - 13360420
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 343  Q
    ||||| |||||||| || | ||||||||||||||||||||||||| ||||||||    
T  13360367 gtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 32248940 - 32249029
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatcc 399  Q
    ||||||| || |||||||||||||||| ||||||| | |  | | ||| |||||||||||||||||| || |||||| |||| |||||||    
T  32248940 taattaccctaaattatgtgattttttaaaattatcaacgttattggcgtgtcagtatccgtgttgtatctggtgtcggtgttcgtatcc 32249029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 34225824 - 34225861
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||| |||||||||||||||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattag 34225861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 6349745 - 6349801
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcat 359  Q
    |||| |||||||||| |||||||||| |||||||||||||||||  | |||||||||    
T  6349745 acacatgtaattacaatgaattatgtaattttttcaaattattaattatgtcggcat 6349801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 7973713 - 7973665
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 343  Q
    |||||||||||||| |||||||||| |||||||| ||||||| ||||||    
T  7973713 cgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 9195754 - 9195806
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||| | |||||||||| |||||||| ||||| ||||||||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 30866149 - 30866197
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagc 30866197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 18252755 - 18252802
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| |||||||||||| |||||||| ||||||| |||||||||    
T  18252755 accgacacctgtaattacactaaattatgtcatttttttaaattatta 18252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 401
Target Start/End: Original strand, 24115862 - 24115953
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgt 401  Q
    |||||| | |||||||||||||||||| |||||||||| | |||| || |||||||  |  ||| |||| ||||||| ||||| ||||||||    
T  24115862 taattatattgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtgcctatgtcgtgttcggtgtctgtgtctgtatccgt 24115953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 25038075 - 25038122
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||| ||||||||||||| |||||||| ||||| |||||||||||    
T  25038075 accgacatttgtaattacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 29220340 - 29220243
Alignment:
Q  258 cacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    |||||||| |||| |||||||||||||  | || |||||  |||||| ||||||||||||||| ||||  | ||||| |||||||||||||  |||||||    
T  29220340 cacggacaatccttggattaggcgtgt--cccgggtccg--accgacgcttgtaattacactgtattacataattttctcaaattattagcgttgtcggc 29220245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 1532284 - 1532246
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  1532284 taattacactgaattatgtaattttatcaaattattagc 1532246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 8931602 - 8931664
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    ||||| |||||| | |||||| |||||||||||| ||||| ||||||| |||||| |||||||    
T  8931602 cgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggc 8931664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 14155238 - 14155288
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    |||||||| |||| |||||| |||||| ||||||||||||| |||||||||    
T  14155238 ccgacaccaacacatgtaatcacactgtattatgtgattttctcaaattat 14155288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 16111757 - 16111827
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||| ||||| | |||||||||| |||||||| |||| |||||| ||||||  |||| |||||||||||    
T  16111757 cgacactgacacctataattacactaaattatgtaatttattcaaactattagtgctgttggcatgtcagt 16111827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 26178683 - 26178733
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||| | | |||||||| |||||||||||||| ||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 369
Target Start/End: Original strand, 32298603 - 32298681
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatcc 369  Q
    |||| |||||| |||| | |||||||||| |||||||||||  | | |||||||||||  ||| |||||||||||||||    
T  32298603 tgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagtatcc 32298681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 33340392 - 33340486
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    ||||||| |||||||| | || ||||||||||||| ||||||| | |  ||||||| |||| || |  ||||||||||||||||| || ||||||    
T  33340392 gacacttataattacagtaaaatatgtgatttttttaaattatcaacggtgtcggcgtgtctgtgtttgtgttgtgtccggtgtctgtatccgta 33340486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 4878055 - 4878026
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  4878055 agcacggacactcctcggattaggcgtgtc 4878026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 6214619 - 6214566
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| | |||||||||| ||||||||| |||||| |||||| ||||    
T  6214619 cgacaccgacacatctaattacacttaattatgtgtttttttaaaattactagc 6214566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaatt 342  Q
    |||||| | ||||||||||||||||||||||||| |||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 17327596 - 17327625
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  17327596 agcacggacactcctcggattaggcgtgtc 17327625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 17841535 - 17841564
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  17841535 agcacggacactcctcggattaggcgtgtc 17841564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 19369876 - 19369831
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaa 340  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||    
T  19369876 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #113
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 20576633 - 20576686
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||| |||||| ||||||||||||||||||  ||||| || ||||||||||    
T  20576633 cgacaccaacacttataattacactgaattatgcaattttctcgaattattagc 20576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #114
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 30851665 - 30851599
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    |||||||||||||||||| | |||||||| |||||  ||||||||| | |||||||||||  |||||||    
T  30851665 cgtgtccgacaccgacacatataattacattgaat--tgtgattttcttaaattattagcagtgtcggc 30851599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #115
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 5462730 - 5462694
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| |||||||||||||||| |||||||||||    
T  5462730 taattacaatgaattatgtgattttctcaaattatta 5462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #116
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 5626690 - 5626766
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||||||||| | || |||||||||| || |||||||| | |||  ||||| | ||||||| |||||||    
T  5626690 cgtgtccgacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagt 5626766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #117
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Original strand, 7569183 - 7569219
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  7569183 taattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #118
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 7723205 - 7723233
Alignment:
Q  256 agcacggacactcctcggattaggcgtgt 284  Q
    |||||||||||||||||||||||||||||    
T  7723205 agcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #119
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 7740706 - 7740650
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 345  Q
    |||||||||||| ||||| | |||||||||| |||| |||||||||  |||||||||    
T  7740706 cgtgtccgacactgacacatataattacactcaattttgtgattttcacaaattatt 7740650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #120
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 16388070 - 16388106
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaa 322  Q
    |||||||||  ||||||||||||||||||||||||||    
T  16388070 acacgtgtctaacaccgacacttgtaattacactgaa 16388106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 9e-40; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 23292980 - 23293095
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||| |||||||||||| |    
T  23292980 cgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccg 23293079  T
Q  389 tgtccgtatccgtgct 404  Q
    |||||||||| |||||    
T  23293080 tgtccgtatctgtgct 23293095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 289 - 401
Target Start/End: Original strand, 35157979 - 35158091
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |  |||||| ||||||| |||||||||||||||||||| |    
T  35157979 cgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccg 35158078  T
Q  389 tgtccgtatccgt 401  Q
    |||||||||||||    
T  35158079 tgtccgtatccgt 35158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 291 - 386
Target Start/End: Complemental strand, 21945566 - 21945471
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| || ||||  |||||||||||    
T  21945566 tgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtc 21945471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 19482727 - 19482618
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||||||||||| | ||||||| ||||||| || |||| ||||| |||||| |||| ||    
T  19482727 cgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcg 19482628  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  19482627 tatccgtgct 19482618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 404
Target Start/End: Complemental strand, 42640637 - 42640482
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc----------acacgtgtccgacaccgacacttgtaattacactgaattatgtgatt---ttttcaaatt 342  Q
    |||||||| |||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  42640637 agcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaatt 42640538  T
Q  343 attagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    || |||| |||||||      || ||||||||||||||  |||| |||||||||||||||||    
T  42640537 atcagctgtgtcggc------gtgtccgtgttgtgtccaatgtccgtgtccgtatccgtgct 42640482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 30299042 - 30298927
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtc 354  Q
    ||||||||||||||||||||||| |||||| |    |  |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  30299042 agcacggacactcctcggattagacgtgtcccg---gcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtc 30298946  T
Q  355 ggcatgtcagtatccgtgt 373  Q
    ||| ||||||| |||||||    
T  30298945 ggcgtgtcagtgtccgtgt 30298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 30327910 - 30327795
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtc 354  Q
    ||||||||||||||||||||||| |||||| |    |  |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  30327910 agcacggacactcctcggattagacgtgtcccg---gcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtc 30327814  T
Q  355 ggcatgtcagtatccgtgt 373  Q
    ||| ||||||| |||||||    
T  30327813 ggcgtgtcagtgtccgtgt 30327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 3947766 - 3947852
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || || |||| |||||||    
T  3947766 cgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtccg 3947852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 28964242 - 28964307
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28964242 cgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagctatgtc 28964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 289 - 381
Target Start/End: Complemental strand, 49431091 - 49430998
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| | |||| || |||||||    
T  49431091 cgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccg 49430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 12797332 - 12797415
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||| ||||||| |||||||    
T  12797332 cgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgtgt 12797415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 29205509 - 29205450
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29205509 cgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 54580017 - 54580075
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54580017 cgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 398
Target Start/End: Original strand, 12895268 - 12895377
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||  | ||||||| ||||| | | ||||| || ||||||||| |    
T  12895268 cgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccg 12895367  T
Q  389 tgtccgtatc 398  Q
    | ||||||||    
T  12895368 tatccgtatc 12895377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 404
Target Start/End: Original strand, 27706185 - 27706286
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtg 402  Q
    ||||||||||||||||| |||||||||||||||| |||||||||  | ||||| | ||||||| ||| ||| ||||| |||||| |||||||||||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtg 27706284  T
Q  403 ct 404  Q
    ||    
T  27706285 ct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 6879435 - 6879535
Alignment:
Q  265 actcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcag 364  Q
    ||||||| |||||||||||| |  ||||||||||||||||||||||||||||||| ||||||||||||||| ||||   || ||| ||||||| ||||||    
T  6879435 actcctcagattaggcgtgttatgcgtgtccgacaccgacacttgtaattacacttaattatgtgatttttccaaaaattttgctatgtcggcgtgtcag 6879534  T
Q  365 t 365  Q
    |    
T  6879535 t 6879535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 2361969 - 2362036
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||    
T  2361969 cgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcgg 2362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 404
Target Start/End: Complemental strand, 20633584 - 20633435
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacac-----ttgtaattacactgaattatgtgattttttcaaattattagctc 350  Q
    |||||| |||||||| ||||||||||||||    |||||||||||||||||     ||||||||||| ||||||||||   |||||||||||||||||      
T  20633584 agcacgaacactccttggattaggcgtgtcttg-gtgtccgacaccgacacgacacttgtaattacattgaattatgt---tttttcaaattattagcgg 20633489  T
Q  351 tgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||| | ||||||| ||||| | ||||| |||||| |||||||||||||||||    
T  20633488 tgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgct 20633435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 11596352 - 11596406
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagct 349  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagct 11596406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 848009 - 847901
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    |||||||||||||||||||| | |||||||||| ||||| |||||||||||||    ||||| ||||||| || |||| |||||||| |||  |||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgt 847910  T
Q  396 atccgtgct 404  Q
    |||||||||    
T  847909 atccgtgct 847901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 28084581 - 28084489
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||| |||||| ||||||| ||||||  || |||| ||||||||||||    
T  28084581 cgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtc 28084489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 8423712 - 8423771
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||    
T  8423712 cgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagc 8423771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 12895116 - 12895183
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||| ||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc 12895183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 356
Target Start/End: Original strand, 38847010 - 38847073
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||| |||||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  38847010 tccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcgg 38847073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 22440563 - 22440651
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| | ||| | ||||||||||||||||||||||||| |||||||||||    
T  22440563 agcacggacactcctcggattaggcgtgtccta-gtgtcggacac-gtcacatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 404
Target Start/End: Complemental strand, 36635368 - 36635274
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||||||||||||||||||| ||||||||||||   ||| ||| ||||||| |||| || |||||||||||| |||||| ||||| ||||    
T  36635368 taattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatgct 36635274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 16073459 - 16073403
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16073459 cgtgtccgacaccgacacttgtaattacactgaattatgcga-tttttcaaattatta 16073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 16303266 - 16303351
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtcc 380  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||| ||||| || ||||||| ||||||| ||||| | ||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtcc 16303351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 30094127 - 30094041
Alignment:
Q  255 tagcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaat------tacactgaattatgtgatttttt 336  Q
    |||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||      |||||||||||||||||||||||    
T  30094127 tagcacggacactcttcggattaggcgtgtcccg-gtgtccgacaccgacacttgtaattacaattacactgaattatgtgatttttt 30094041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 34306798 - 34306889
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||| | ||||||| | ||||| || || |||||||||    
T  34306798 cgtgtccgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtctgtattgtgtccg 34306889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 24343560 - 24343457
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccg 400  Q
    |||||| | ||||||||||||||||||| ||||| ||||||||||| |  ||||||| |||| |  ||||||| |||||||||||| ||||| || ||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 24343461  T
Q  401 tgct 404  Q
    ||||    
T  24343460 tgct 24343457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 40179630 - 40179745
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||| | | ||||||||||||||||||||||||||||||| |||||    ||||  | ||||||| |||||||  ||| ||||||| |    
T  40179630 cgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtctg 40179729  T
Q  389 tgtccgtatccgtgct 404  Q
     |||||||| ||||||    
T  40179730 agtccgtatgcgtgct 40179745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 4157214 - 4157157
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  4157214 cgtgtccgacaccgacacttgtaattgcactaaattatgtgat-ttttcaaattattag 4157157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 40481687 - 40481610
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | | ||||| ||||||| || |||| |||||||    
T  40481687 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 40481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 715608 - 715669
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcgg 356  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  715608 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcgg 715669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 752934 - 752995
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcgg 356  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  752934 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcgg 752995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 11651142 - 11651210
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||||||| || ||||||||||||||||||||| |||||||||||| ||||| | ||||||| |||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgt 11651210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 17425353 - 17425441
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||| |||||||||||||||||||||||| |  ||||| ||||| ||||| |  ||||||||||||||||| |||||| ||||||||||||    
T  17425353 agcacagacactcctcggattaggcgtgtc-cttgtgtctgacacagacacat--aattacactgaattatgcgattttctcaaattattag 17425441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 28720924 - 28720849
Alignment:
Q  305 acttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||| |||||||| ||||| |||||||| ||||||||||||| ||||||||||||||| | ||||| |||||||    
T  28720924 acttgtagttacactgcattatatgattttt-caaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtccg 28720849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 15029825 - 15029754
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||| |||| | |||||||||||||||||||||| ||||||||||||||||  |||| || |||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagt 15029754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 24613702 - 24613753
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattag 24613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 30982878 - 30982984
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||   |  ||| |||| || ||||||| || |||||||||  ||| ||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagc---ggtggcgtgtctgtgtccgtgtcgtatccggtgtccatgttcg 30982974  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  30982975 tatccgtgct 30982984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 47264044 - 47263985
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||| ||||| |||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattagctatgtcg 47263985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 354
Target Start/End: Complemental strand, 51701309 - 51701258
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 482229 - 482279
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  482229 acacgtgtccgacaccgacagttataattacactgaattatgtgttttttt 482279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 404
Target Start/End: Complemental strand, 903966 - 903872
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||||||||||||||||||| ||||||||||| |  || |||  ||||||| ||||| || |||| || | | |||||||||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgttttatgtctggcgcccgtgtccgtatccgtgct 903872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 4157501 - 4157455
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttt 335  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||    
T  4157501 cgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 12708206 - 12708096
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttttt-caaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    ||||| |||||||||||||||||||||||||| | |||||||  |||||||||| | |||| || ||||||| || | || ||||| | |||| ||||||    
T  12708206 cgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgtctgatgtccgtgtcc 12708107  T
Q  394 gtatccgtgct 404  Q
    |||| ||||||    
T  12708106 gtattcgtgct 12708096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 50280942 - 50280873
Alignment:
Q  295 cgacaccgacacttgtaattacac--tgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||| |||||||||||||||  | |||||||||| |||||||||||||||||| ||||||| ||||    
T  50280942 cgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtc 50280873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 404
Target Start/End: Original strand, 10499233 - 10499377
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||| ||||||||||||||||||  |  | ||||||||| ||||| | |||||||||| |||||||||||||| |||| || |||| | |||||    
T  10499233 agcacggacaatcctcggattaggcgtgtgtc--gggtccgacactgacacatataattacactaaattatgtgattttctcaagtt-ttagatgtgtcg 10499329  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |  ||||||| || ||| |||||| |||||| || || |||||| ||||    
T  10499330 gtgtgtcagtgtcagtg-tgtgtctggtgtccgtatctgtatccatgct 10499377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 37203315 - 37203270
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagc 37203270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 4383426 - 4383375
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  4383426 cgacactgacatttgtaattacactgaattatgtgat-ttttcaaattattag 4383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 11931338 - 11931242
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtc 392  Q
    |||| |||||| | || ||||||| |||||||||||||||||| ||||||| |  |||||||||| || | ||||||| |||||| ||||| |||||    
T  11931338 gacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtcggcatggcattgtccgtgtagtgtccagtgtccgtgtc 11931242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 14126118 - 14126214
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatc 398  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||| |  ||||||| ||| ||| || |||| ||||||  |||| ||||| |||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtccactgtctgtgtctgtatc 14126214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 42015022 - 42014918
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaatt-atgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    ||||||||||| |||| | ||||||||||||||| |||||||| | ||||| | |||| |  ||||||| |||||| |  ||||||||||||||||||||    
T  42015022 tgtccgacaccaacacatataattacactgaatttatgtgattatctcaaaattttagttgcgtcggcaggtcagtgtatgtgttgtgtccggtgtcagt 42014923  T
Q  390 gtccg 394  Q
     ||||    
T  42014922 atccg 42014918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 5414172 - 5414263
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||| || | ||||||||||| ||| ||||||||| | |||  ||||||| ||||||| |||| || ||||||| ||||||||||||    
T  5414172 cgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccggtgtc 5414263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 14465088 - 14465127
Alignment:
Q  308 tgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattag 14465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 28000743 - 28000794
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattatta 346  Q
    ||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  28000743 gacaccgacacttgtaattacactgaattatatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 31800472 - 31800539
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    ||||| ||| ||||||||||||||||||| | |||||| | ||||||| |||||||||||| ||||||    
T  31800472 cgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcgg 31800539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 40613504 - 40613441
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    ||||||| | ||||||||||||||||||||||||| ||||| |||||||  ||||||| |||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 5775359 - 5775409
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||| | |||||||||| |||||||||||||| |||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 16189773 - 16189715
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||| |||||||||   ||||||||||||||||||||||||| ||||||| |||||    
T  16189773 gtgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatttttagc 16189715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 400
Target Start/End: Original strand, 20521873 - 20521954
Alignment:
Q  319 tgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccg 400  Q
    |||||||||||||||| ||||||||||| |  | ||||| ||||||| ||||||| ||||| ||||||  ||| ||||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgtccatgtacgtatccg 20521954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 22234890 - 22234967
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    |||||||||||| |  |||||||||||||||||||| |||||||||||| |||||  ||||||| |||| || |||||    
T  22234890 cgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgt 22234967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 365
Target Start/End: Complemental strand, 24544075 - 24543970
Alignment:
Q  264 cactcctcggattaggcgtgtcacacgtgtccga----caccgacacttgtaattacactgaattatgtg-attttttcaaattattagctctgtcggca 358  Q
    ||||||||||||||||| |||| || ||||| ||    |||||||||||||||||||| || |||| ||| ||||||| |||||||||| | |||||||     
T  24544075 cactcctcggattaggcatgtc-catgtgtcggacacgcaccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcg 24543977  T
Q  359 tgtcagt 365  Q
    |||||||    
T  24543976 tgtcagt 24543970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 4672083 - 4672147
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    |||||||||||||| | ||  ||||||||||||||| |||||  ||||||||||||| |||||||    
T  4672083 tccgacaccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcggc 4672147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 13307942 - 13307891
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 340  Q
    ||||||||||||| |||||||| |||||| |||||||||| ||||| |||||    
T  13307942 cgtgtccgacaccaacacttgtgattacattgaattatgtcattttctcaaa 13307891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 35723384 - 35723455
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtg-attttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||| ||||| | |||||||| ||||||||||| ||||| |||||||||||||  ||||||| |||||||    
T  35723384 cgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 36386207 - 36386262
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||| |||| | |||||||||||||||||||  |||| |||||||||||    
T  36386207 tgtccgacaccaacacctttaattacactgaattatgtccttttctcaaattatta 36386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 2626018 - 2626056
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgatttttt 336  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  2626018 caccgacacgtgtaattacaccgaattatgtgatttttt 2626056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 9996903 - 9996849
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 345  Q
    |||| |||||||| || | |||||| |||||||||||||||||| ||||||||||    
T  9996903 tgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 12224208 - 12224242
Alignment:
Q  308 tgtaattacactgaattatgtgattttttcaaatt 342  Q
    ||||||||||||||||||||||||||||| |||||    
T  12224208 tgtaattacactgaattatgtgatttttttaaatt 12224242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 12628617 - 12628655
Alignment:
Q  327 gtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||||||||||| || |||||||||||||||    
T  12628617 gtgattttttcaaattattaactgtgtcggcatgtcagt 12628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 13783340 - 13783262
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||| ||| | ||||||||||||||| |||||| || |||||| ||||||  ||||||  ||||||| |||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgt 13783262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 344
Target Start/End: Complemental strand, 24999088 - 24999054
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattat 344  Q
    ||||||||||||||| |||||||||||||||||||    
T  24999088 taattacactgaattgtgtgattttttcaaattat 24999054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 33950200 - 33950142
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||| ||||||||||| | | |||||| | |||||||||||||| |||||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagc 33950142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 36409506 - 36409556
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 339  Q
    ||||| |||||||||||| | |||||||||| |||||||||| ||||||||    
T  36409506 cgtgttcgacaccgacacctataattacactaaattatgtgactttttcaa 36409556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 36423672 - 36423722
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 339  Q
    ||||| |||||||||||| | |||||||||| |||||||||| ||||||||    
T  36423672 cgtgttcgacaccgacacctataattacactaaattatgtgactttttcaa 36423722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 44081592 - 44081686
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |||||||| | |||||| ||||||||||||||||||| |  | ||||  ||||||| ||| ||| ||||||| |||  ||||||||||| |||||    
T  44081592 taattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatcggtgct 44081686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 56257977 - 56257939
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  56257977 taattacactgaattatatgattttctcaaattattagc 56257939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 715551 - 715580
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  715551 agcacggacactcctcggattaggcgtgtc 715580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 752877 - 752906
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  752877 agcacggacactcctcggattaggcgtgtc 752906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 3064874 - 3064903
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  3064874 agcacggacactcctcggattaggcgtgtc 3064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 4383479 - 4383450
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  4383479 agcacggacactcctcggattaggcgtgtc 4383450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 5775310 - 5775339
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  5775310 agcacggacactcctcggattaggcgtgtc 5775339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 15659760 - 15659813
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||| |||| | ||||||||| |||||||| |||||| |||||||||||||    
T  15659760 cgacaccaacacatataattacaccgaattatgagattttctcaaattattagc 15659813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 19312394 - 19312353
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    ||||||||| |||| |||||||||||||| ||||||||||||    
T  19312394 cgacaccgatacttataattacactgaatcatgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 20743295 - 20743348
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||||||| ||||| ||||||||||| |  ||||||| |||||||    
T  20743295 attacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagt 20743348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 23292932 - 23292961
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  23292932 agcacggacactcctcggattaggcgtgtc 23292961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 28084637 - 28084608
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  28084637 agcacggacactcctcggattaggcgtgtc 28084608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 30838269 - 30838216
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||| |||| |||||||||| |||||| | ||||| |||||||||||||    
T  30838269 cgacaccgatacttataattacactaaattatataattttatcaaattattagc 30838216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 35161101 - 35161056
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||| | || |||| |||||||||||||||||||||||||    
T  35161101 cgtgtccgactctgatacttataattacactgaattatgtgatttt 35161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 348
Target Start/End: Original strand, 38148741 - 38148778
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagc 38148778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 13117493 - 13117449
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    ||||||||||||||||||||| |||||| |||||| ||| |||||    
T  13117493 gtgtccgacaccgacacttgtgattacattgaattttgtcatttt 13117449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 16184861 - 16184800
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||| ||||||||| ||||||||| ||||||||||||  | |||||| ||||||| |||||||    
T  16184861 taatttcactgaattgtgtgattttctcaaattattag--cggtcggcgtgtcagtgtccgtgt 16184800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 386
Target Start/End: Original strand, 16402226 - 16402302
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||| || |||| ||||| ||||||||||| |  ||||||||||||||| | | ||| |||| |||||||    
T  16402226 taattacactgtatcatgttattttctcaaattattatccgtgtcggcatgtcagtgttcatgtcgtgtgcggtgtc 16402302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 18576038 - 18576086
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    |||||| |||| | ||||||||| ||||||||||||||| |||||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 30522933 - 30522993
Alignment:
Q  313 ttacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||||||||||||||| |||||| ||||||  |||  || | |||||||||||||    
T  30522933 ttacactgaattatgtgattttctcaaataattagcggtgtgagcgtatcagtatccgtgt 30522993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 32273526 - 32273578
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||| ||| |||| ||||||  ||||||||||| ||||||||||||||||||    
T  32273526 cgacatcgaaacttataattattctgaattatgttattttttcaaattattag 32273578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 32910595 - 32910559
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  32910595 taattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 8863 - 8748
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||||| |    
T  8863 cgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 8764  T
Q  389 tgtccgtatccgtgct 404  Q
    ||||||||||| ||||    
T  8763 tgtccgtatccatgct 8748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 96)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 25481967 - 25481852
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||| ||||||||||| |||| |    
T  25481967 cgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccg 25481868  T
Q  389 tgtccgtatccgtgct 404  Q
    |||| |||||||||||    
T  25481867 tgtctgtatccgtgct 25481852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 295 - 400
Target Start/End: Complemental strand, 24339701 - 24339596
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||| ||| |||||||||||| || ||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccg 24339602  T
Q  395 tatccg 400  Q
    ||||||    
T  24339601 tatccg 24339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 11061069 - 11061185
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtca 387  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| || |||| ||||     
T  11061069 acgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtcc 11061168  T
Q  388 gtgtccgtatccgtgct 404  Q
    |||||||||||||||||    
T  11061169 gtgtccgtatccgtgct 11061185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 5409836 - 5409945
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || || ||||||| ||| ||| || ||||||||| ||||| |    
T  5409836 cgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctg 5409935  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  5409936 tatccgtgct 5409945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 295 - 395
Target Start/End: Complemental strand, 27945100 - 27945000
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||   ||||||| ||||||| ||||||| |||||||||||| || ||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccg 27945001  T
Q  395 t 395  Q
    |    
T  27945000 t 27945000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 13770750 - 13770643
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| | ||||| ||||||| ||||||| |||| | ||||     
T  13770750 cgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtccgagtcca 13770651  T
Q  395 tatccgtg 402  Q
    ||||||||    
T  13770650 tatccgtg 13770643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 26733369 - 26733254
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||  ||||| | ||||||| ||||||| ||||| |||||| |    
T  26733369 cgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcgg 26733270  T
Q  389 tgtccgtatccgtgct 404  Q
    | ||||| ||||||||    
T  26733269 tatccgtttccgtgct 26733254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 7438764 - 7438695
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagt 7438695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 357
Target Start/End: Complemental strand, 28155667 - 28155567
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||| |||| |||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||  |||||    
T  28155667 agcacggacattccttggattaggcgtgtc-ctggtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcg 28155569  T
Q  356 gc 357  Q
    ||    
T  28155568 gc 28155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 9778559 - 9778458
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||         ||||||| ||||||| |||||||||||| |||||||    
T  9778559 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagct--------gtgtcagtgtccgtgtcgtgtccggtgtccgtgtccg 9778468  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  9778467 tatccgtgct 9778458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 21880217 - 21880104
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||  ||||| ||| | |||||  ||||||||||| |    
T  21880217 cgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtccacatgttagtgttcgtgt--tgtccggtgtccg 21880120  T
Q  389 tgtccgtatccgtgct 404  Q
    |||| |||| ||||||    
T  21880119 tgtctgtatgcgtgct 21880104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 404
Target Start/End: Complemental strand, 35862064 - 35861908
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgac---accgacacttgtaattacactgaattatgtgattttttcaaattattagctctg 352  Q
    |||||||||||||||||||||||||||||| | ||||||||||   || |||||||  ||||||| ||||||||||||||||||||||||||||| | ||    
T  35862064 agcacggacactcctcggattaggcgtgtc-ctcgtgtccgacgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtg 35861966  T
Q  353 tcggc------atgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |||||       ||| ||| || |||| |||||||||||| | |||||||||||||||    
T  35861965 tcggcgtgttagtgttagtgtctgtgtcgtgtccggtgtccgcgtccgtatccgtgct 35861908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 381
Target Start/End: Complemental strand, 24105738 - 24105651
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||| |||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||| ||||||| ||||||| |||||||    
T  24105738 ccgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 43027469 - 43027560
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  |||| | ||||||| ||||||| |||||| |||||    
T  43027469 cgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtc 43027560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 257 - 373
Target Start/End: Original strand, 18215144 - 18215264
Alignment:
Q  257 gcacggacactcctcggattaggcgtgtcacacgtgtc-----cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctct 351  Q
    ||||||||||||||| ||||||||||||| |  |||||     |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||      
T  18215144 gcacggacactcctcagattaggcgtgtcccg-gtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgc 18215242  T
Q  352 gtcggcatgtcagtatccgtgt 373  Q
    |||||| ||| ||| |||||||    
T  18215243 gtcggcgtgttagtgtccgtgt 18215264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 15680874 - 15680798
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||  ||||||||||| ||||||| |||||||    
T  15680874 cgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagt 15680798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 19213906 - 19213809
Alignment:
Q  256 agcacggacactcctcggattaggcg---tgtcaca--cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||||||||||||   |||| |   ||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  19213906 agcacggacactcctcggattaggcggcgtgtcccggtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagc 19213809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 3991422 - 3991322
Alignment:
Q  260 cggacactcctcggattaggcgtgtcaca--cgtgtc--cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||||||||||||||||||| ||  ||   |  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||    
T  3991422 cggacactcctcggattaggcgtgtcccagtcgatacgacgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcg 3991323  T
Q  356 g 356  Q
    |    
T  3991322 g 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 26033465 - 26033515
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgattttttcaaattattagct 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattattagct 26033515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 7197292 - 7197365
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||| |||||||||||| ||||||| |||||    
T  7197292 gtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtca 7197365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 8234211 - 8234144
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||| | ||||||    
T  8234211 cgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcgg 8234144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 9408334 - 9408385
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 1433513 - 1433404
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | |||||||||  ||| |||||||||| ||||||||||| |  ||||||| ||||| | ||||||| |||| ||||||| ||| |||    
T  1433513 cgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccg 1433414  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  1433413 tatccgtgct 1433404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 1885632 - 1885523
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||| | ||| |  |||||   |||| ||||| |||| |||||||||||| ||||| |    
T  1885632 cgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgtccgtatcagtgtcgtgtccggtgtccgtgtctg 1885533  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  1885532 tatccgtgct 1885523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 18039058 - 18039006
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattatta 346  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 398
Target Start/End: Original strand, 13557750 - 13557847
Alignment:
Q  304 cacttgtaattacactgaattatgtga---ttttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatc 398  Q
    |||||||||||||||||||||||||||   |||||| |||||||||| | ||||||| ||||||| || ||||  ||||||||||| ||||| |||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtccggtgtccgtgtctgtatc 13557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 404
Target Start/End: Complemental strand, 17851488 - 17851381
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    |||| ||||| | ||||||||||||||||||||||||| | |||||||||||  | |||   |||| |||||| ||| |||||||||||| ||||| |||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgta 17851389  T
Q  397 tccgtgct 404  Q
    ||||||||    
T  17851388 tccgtgct 17851381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 19992060 - 19992001
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 20549855 - 20549780
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||||  ||||||  |||||||    
T  20549855 gtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 21560562 - 21560487
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttt-----ttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||||||||||||||||||||||||||||||     ||||||||||||||| | ||||| |||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtgtcagt 21560487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 381
Target Start/End: Complemental strand, 21864873 - 21864779
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtga--ttttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||| ||||||||||||||||||| |||||| |||  ||||||||||||||||||| |||| |  |||| || ||||||| |||||||    
T  21864873 cgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccg 21864779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 32094020 - 32094087
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcggcatgt 361  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | ||| |||||||    
T  32094020 cgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgt 32094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 33994277 - 33994187
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    |||||| ||||||||||||||||||| |||||||||||||||  ||||||||||| ||| |  |||||| ||||||| | ||||| |||||    
T  33994277 cgtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgttcgtgtcgtgtc 33994187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 3721158 - 3721070
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgt 378  Q
    |||||||||||||||||| | |||||| ||| |||||||||||||| |||||||||||||  |||||  |||||||| ||||||| ||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc-atgtcgaaatgtcagtgtccgtgtcgtgt 3721070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 11272586 - 11272650
Alignment:
Q  295 cgacaccgacacttgtaattacactgaat--tatgtgattttttcaaattattagctctgtcggc 357  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||| || | |||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggc 11272650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 11665441 - 11665514
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatcc 369  Q
    |||| |||||||| |||||| ||||||||||||||||||||||||||||||| | |||| || ||||| |||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtcaatatcc 11665514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 26329382 - 26329491
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||| ||||||| | ||||||||||||||| |||| |||| ||||||||||| |  ||||||| ||||||| || |||| |||||| ||||| ||||| |    
T  26329382 cgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgtgtctg 26329481  T
Q  395 tatccgtgct 404  Q
    ||| ||||||    
T  26329482 tattcgtgct 26329491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 30813910 - 30813818
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacac-cgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||||||||||||||  |   |||| ||||| | |||| ||||||||||||||||||||| ||||| |||||||||||||    
T  30813910 agcacggacactcctcggattaggcgtgtt-ctgatgtcggacacgcaacacctgtaattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 40287308 - 40287423
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc----------acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 345  Q
    ||||||||||||||||||||||||| ||||          ||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  40287308 agcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtccgataccgacacttgtaattacactgaa-tatatgattttttcaaattatt 40287406  T
Q  346 agctctgtcggcatgtc 362  Q
     | | ||||||| ||||    
T  40287407 cgttgtgtcggcgtgtc 40287423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 386
Target Start/End: Complemental strand, 43250046 - 43249961
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||| ||||||||||| ||||||| ||||| ||||||||||| |  ||||||| ||||||| |||||||  |||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtc 43249961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 2334309 - 2334238
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt--ttttcaaattattagctctgtcggcatgtcag 364  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||||||||| || ||||| | ||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaactttgtcgccgtgtcag 2334238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 7058485 - 7058433
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  7058485 cgacaccaacacttgtaattacactgaattacatgattttttcaaattattag 7058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 381
Target Start/End: Complemental strand, 15902879 - 15902795
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||| | |||||||||| |||||||||||||| |||||||||||    ||||||||||||||| || |||| |||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 1401090 - 1401031
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||| |||||||| |||| ||||||||||||||||||||| ||| |||||||||||||    
T  1401090 cgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 371
Target Start/End: Complemental strand, 9482996 - 9482917
Alignment:
Q  292 gtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||||||||||||| | ||||||||||||||| ||||||||| ||||||||| |||  ||||||  ||||||| |||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 13300468 - 13300417
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 22868086 - 22868015
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||||||||||||||||| ||| ||||||||   ||||||| ||||||| || ||||||||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtccg 22868015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 25822714 - 25822647
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||||||||||||||||||||||||| ||   ||||||||||||||||| | ||||||| ||||    
T  25822714 cgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtc 25822647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 29787384 - 29787455
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||| ||| | | |||||||||| ||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgttgtatccg 29787455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 32308163 - 32308100
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgtt 374  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||| ||||||| ||| ||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccatgtt 32308100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 22602710 - 22602816
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | ||||||||||||||||||||||||| |||||| |||  |  ||||||| |||||||  | |||| ||||  |||| | |||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcccgtgtccg 22602809  T
Q  395 tatccgt 401  Q
    |||||||    
T  22602810 tatccgt 22602816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 23191961 - 23191879
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    |||||| ||||| || || ||||||||||||||| ||||||||||| |||||||||||||  ||||||| | ||||| |||||    
T  23191961 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 11722121 - 11722186
Alignment:
Q  318 ctgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggt 383  Q
    ||||||||||||||||| ||||||| |||||  ||||||| ||||||| ||||||| |||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggt 11722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 21140982 - 21141091
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||| ||||||| | |||| |||||||||||| ||||||| | ||||||||||   ||||| | |||| |  ||||||| |||| ||||||| |||||||    
T  21140982 cgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccg 21141081  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  21141082 tatccgtgct 21141091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 21826340 - 21826223
Alignment:
Q  287 cacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||||||||||| | | |||| ||||| |||||||||||||| ||||||||||   ||||||| ||| ||| ||  ||| ||||| ||||||    
T  21826340 cacgtgtccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtctggtgtc 21826241  T
Q  387 agtgtccgtatccgtgct 404  Q
      ||||||| | ||||||    
T  21826240 catgtccgtcttcgtgct 21826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 30731080 - 30730987
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |||||||||||||||||||||||| |||||||||| ||  ||||||| || || | |  |||| ||||| |||||| ||||||||||| |||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgct 30730987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 18213027 - 18213143
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-ttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtca 387  Q
    |||||||||||||||||| | |||||||||| |||||||||||||| |  |||  ||||| | ||||||| | ||||| ||||||| ||||| |||||      
T  18213027 cgtgtccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttc 18213126  T
Q  388 gtgtccgtatccgtgct 404  Q
    |||| |||||| |||||    
T  18213127 gtgttcgtatctgtgct 18213143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaa 340  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 11890919 - 11890970
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||| |||||  ||||||||||||||||| |||||||||||||||||||    
T  11890919 cgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 379
Target Start/End: Complemental strand, 19206108 - 19206025
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    ||||||||||| | |||||| | |||||||||||||||| |||||||||||||  ||||||| |||  || ||||||| |||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 2424658 - 2424620
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 11831481 - 11831439
Alignment:
Q  305 acttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattag 11831439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 18013074 - 18013152
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||| ||||| | ||||||||||||||||||| ||||||| ||||||||||   |||| | |||||||| |||||||    
T  18013074 cgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgt 18013152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 401
Target Start/End: Original strand, 29763135 - 29763280
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacacc-gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    |||||||||||||||||||||||||||||| |   |||| |||||  | |   ||||| |||||| |||||||||||||||||||||||| || | |||     
T  29763135 agcacggacactcctcggattaggcgtgtc-ctgatgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaattataagttgtgtt 29763233  T
Q  355 ggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgt 401  Q
    ||  ||||||| ||  ||| |||| ||||||| |||| |||||||||    
T  29763234 ggtgtgtcagtgtctatgtcgtgttcggtgtctgtgttcgtatccgt 29763280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 42720885 - 42720943
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||| ||||| ||||| | |||||||| | ||||||||||||||||||||||||||||    
T  42720885 gtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagc 42720943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 7328691 - 7328744
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| | |||||||||| |||||||| ||||| |||||||||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 25956510 - 25956465
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||    
T  25956510 cgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 25956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 32287459 - 32287516
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||| | || || ||||||||||||||||||| ||| |||||||||    
T  32287459 tgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagc 32287516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 39138509 - 39138464
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||||||||  | |||||||||||||||||||||||||    
T  39138509 cgtgtccgacaccgacatatataattacactgaattatgtgatttt 39138464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 386
Target Start/End: Original strand, 2425736 - 2425824
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||| | || || |||| |||||||||||||| ||||||||||| |  || |||| |||||||||| |||| |||||| |||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtc 2425824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 5548735 - 5548671
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcat 359  Q
    |||||| ||||| | ||||||||||||||||| ||||||| ||||||||| |||  |||||||||    
T  5548735 cgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 5835310 - 5835254
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||| ||||||||||| | ||||||||||||||||||| ||||| ||||| ||||||    
T  5835310 tgtctgacaccgacacatataattacactgaattatgttattttctcaaactattag 5835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 381
Target Start/End: Original strand, 7973125 - 7973214
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtga--ttttttcaaattattagctctgt---cggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||| ||| ||||||||||| | ||||||||||  ||||||||||||||||  | |||   |||||||||||||||||||| |||||||    
T  7973125 acaccaacatttgtaattacattaaattatgtgattttttttcaaattattaattgtgtcggcggcatgtcagtatccgtgtcgtgtccg 7973214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 38143287 - 38143231
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||| |||||| |||| | |||||||| | ||||||||||||||||||||||||||    
T  38143287 gtgtctgacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 380
Target Start/End: Complemental strand, 49107918 - 49107795
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    ||||| ||||||||||||||||||  |||| |||     |||||||||||| | |||| ||||| ||||||||| |||| |||||||||||||  |||||    
T  49107918 agcacagacactcctcggattaggtatgtcccactaacacgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcg 49107820  T
Q  356 gcatgtcagtatccgtgttgtgtcc 380  Q
    |  ||||||  ||||||| ||||||    
T  49107819 gtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 598273 - 598170
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||| |||||||||||||  ||||||| | ||||| |||||||| | |||||||||||  |||||   ||||||| |||||||  |||| |||||| |    
T  598273 cgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccg 598174  T
Q  389 tgtc 392  Q
    ||||    
T  598173 tgtc 598170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 373
Target Start/End: Original strand, 4880929 - 4880988
Alignment:
Q  314 tacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||| ||||||| ||||||| |||||||||||  ||||||| ||| |||||||||||    
T  4880929 tacactgtattatgtaatttttttaaattattagcaatgtcggcgtgttagtatccgtgt 4880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 6028684 - 6028633
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||| ||||||||||| | |||||||| || ||||||||||||||    
T  6028684 cgacaccgacatttgtaattacattaaattatgttatattttcaaattatta 6028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 13585346 - 13585296
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||| |||||||||||||||   ||||||||||||| |||||||||||||||    
T  13585346 attacagtgaattatgtgattt---caaattattagctgtgtcggcatgtcagt 13585296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 16341555 - 16341504
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| ||| | |||||||||| |||||||||||||| |||||||||||    
T  16341555 cgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 21930687 - 21930605
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgt 378  Q
    ||||| ||||||||||||||| | |||||||| | ||||||| ||||||||||||  |||||| ||||||| ||| | ||||||    
T  21930687 cgacatcgacacttgtaattaaaatgaattatctaatttttt-aaattattagctgagtcggcgtgtcagtgtccatattgtgt 21930605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 6630912 - 6630982
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||| |||||| | |||||||||||||||| |||| ||| ||||||||||||   ||||||| |||||||    
T  6630912 cgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 10042996 - 10042918
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||| ||||||| ||||||| || |||||||||| ||| ||||||||||||   ||||||| ||| ||| |||||||    
T  10042996 cgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgt 10042918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 12289158 - 12289120
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  12289158 taattccactgaattatgtgattttctcaaattattagc 12289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 14729745 - 14729707
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  14729745 taattacactgaattacgtgattttctcaaattattagc 14729707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 22484088 - 22484014
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||| ||||||||||| | |||||| |||||||||||  ||||| | |||||||||||  ||||||| |||||||    
T  22484088 tgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 24146905 - 24146822
Alignment:
Q  259 acggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||| |||| ||||||      |||| ||||||||||| | |||||| | |||||||||||||||| | |||||||||||    
T  24146905 acggacactcctcgtattaagcgtgt------tgtcagacaccgacacatataattatattgaattatgtgattttctaaaattattagc 24146822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 640171 - 640134
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattt 333  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  640171 gacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 5409777 - 5409806
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  5409777 agcacggacactcctcggattaggcgtgtc 5409806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 22306574 - 22306537
Alignment:
Q  312 attacactgaattatgtgatt-ttttcaaattattagc 348  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22306574 attacactgaattatgtgatttttttcaaattattagc 22306537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 4909215 - 4909159
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||| ||||| | | |||||| |||||||||| ||||| |||||||||||    
T  4909215 gtgtccgacactgacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 5954294 - 5954254
Alignment:
Q  307 ttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||  ||||||| ||||||||||||||||||    
T  5954294 ttgtaattacactagattatgtaattttttcaaattattag 5954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 11700847 - 11700811
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| |||||||||||||||| |||||||||||    
T  11700847 taattacattgaattatgtgattttgtcaaattatta 11700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 12278898 - 12278843
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||| ||||| | ||||||||||||||||||| ||||| | |||||||||    
T  12278898 gtgtccgacac-gacacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 17307952 - 17307904
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 343  Q
    ||||||| |||| | ||||||||||||||||||| ||||| ||||||||    
T  17307952 cgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 41020553 - 41020485
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||| | | |||||||||| |||||||||||||||  |||||||||| | ||||| | |||||||    
T  41020553 acaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagt 41020485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 256 - 404
Target Start/End: Complemental strand, 46770 - 46632
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    ||||||||||||||||||||||||||||||          |||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||    
T  46770 agcacggacactcctcggattaggcgtgtc----------gacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcg 46681  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    || ||||| | ||||||| ||||||| |||| |||||||||||||||||    
T  46680 gcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgct 46632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 133)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 291 - 404
Target Start/End: Original strand, 42359445 - 42359558
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtg 390  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| || ||||||| |||||||||||| ||||||  |||    
T  42359445 tgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtg 42359544  T
Q  391 tccgtatccgtgct 404  Q
    ||||||||||||||    
T  42359545 tccgtatccgtgct 42359558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 35702548 - 35702658
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcaca-cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    |||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||| |||||| |||  ||||||||||||||||| ||||    
T  35702548 agcacggacactcctcggattaggcgtgtcccatcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtc 35702647  T
Q  355 ggcatgtcagt 365  Q
    |||||||||||    
T  35702648 ggcatgtcagt 35702658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 1486709 - 1486818
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| || |||||| || |||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccg 1486808  T
Q  395 tatccgtgct 404  Q
    ||||| ||||    
T  1486809 tatccatgct 1486818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 22881573 - 22881686
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcaca----cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctct 351  Q
    ||||||||||||||||||||||| |||||| |     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  22881573 agcacggacactcctcggattagacgtgtcccggtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgt 22881672  T
Q  352 gtcggcatgtcagt 365  Q
    |||||| |||||||    
T  22881673 gtcggcgtgtcagt 22881686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 38078655 - 38078765
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||||||| |     | |||||||||||| |    
T  38078655 cgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccg 38078749  T
Q  389 tgtccgtatccgtgct 404  Q
    ||||||||||||||||    
T  38078750 tgtccgtatccgtgct 38078765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 398780 - 398874
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||||| |||||||||||| | |||||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgct 398874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 6612171 - 6612280
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| || | ||||| ||||| | ||||||| |||||||||||  |||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccg 6612270  T
Q  395 tatccgtgct 404  Q
    |||| |||||    
T  6612271 tatctgtgct 6612280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 46348377 - 46348461
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||||| |||||||    
T  46348377 cgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 46348461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 40917808 - 40917714
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    ||||||||| ||||||||||||||| ||||  ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| ||||    
T  40917808 cgacaccgagacttgtaattacacttaatt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgtgt 40917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 372
Target Start/End: Original strand, 22515881 - 22515964
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtg 372  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || |||| || ||||||    
T  22515881 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 51410090 - 51410016
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  51410090 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggcatgtc 51410016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 113358 - 113289
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcag 364  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 13011210 - 13011319
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt-ttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||| | ||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| | ||||| |||| ||||||| |    
T  13011210 gtgtccaaaaccaacacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccg 13011309  T
Q  389 tgtccgtatc 398  Q
    |||| |||||    
T  13011310 tgtctgtatc 13011319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 41877462 - 41877579
Alignment:
Q  287 cacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||  ||||||| |  |||| || |||| ||||| ||| ||    
T  41877462 cacgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatc 41877561  T
Q  387 agtgtccgtatccgtgct 404  Q
      ||||||||||||||||    
T  41877562 catgtccgtatccgtgct 41877579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 31672889 - 31672965
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||    
T  31672889 cgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagt 31672965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 9709885 - 9709770
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||| | ||||||||  ||||||||||||||| |||||||||||||  ||| ||||||||||| ||||||| ||||| | ||||      
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtcca 9709786  T
Q  389 tgtccgtatccgtgct 404  Q
    |||| |||||||||||    
T  9709785 tgtctgtatccgtgct 9709770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 18337393 - 18337338
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18337393 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 288 - 363
Target Start/End: Original strand, 19058849 - 19058924
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||| |||||    
T  19058849 acgtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtca 19058924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 300 - 395
Target Start/End: Complemental strand, 31015097 - 31015002
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||  ||||||  |||||| ||| |||||||| ||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgt 31015002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 401
Target Start/End: Original strand, 48040420 - 48040568
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacac---cgacacttgtaattacactgaattatgtgat-tttttcaaattattagctct 351  Q
    ||||||||||||||||  |||||||||||| || ||||| |||||   ||||||||||| ||||||| || |||||||  ||||||||||||||| || |    
T  48040420 agcacggacactcctccaattaggcgtgtccca-gtgtcggacacgaccgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgt 48040518  T
Q  352 gtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgt 401  Q
    |||||| ||||||| ||||||| |||||||||||| || ||| |||||||    
T  48040519 gtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccatatccgt 48040568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 404
Target Start/End: Complemental strand, 9103703 - 9103590
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| || ||||||| ||||||| |||| ||  |||| |||||  ||    
T  9103703 gtgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgttcgt 9103605  T
Q  390 gtccgtatccgtgct 404  Q
    |||| ||||||||||    
T  9103604 gtccatatccgtgct 9103590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 307 - 404
Target Start/End: Original strand, 16297295 - 16297392
Alignment:
Q  307 ttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |||||||||||||||||| ||||||||||||| |||||| ||| ||||| | ||||||||||||| | ||||||| ||||  ||||||||||||||||    
T  16297295 ttgtaattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatccgtgct 16297392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 31694710 - 31694819
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtga--ttttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtc 392  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||| | | ||||| ||  ||| |||||||||||| || ||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--tgtcgtgtccggtgtccgtatc 31694807  T
Q  393 cgtatccgtgct 404  Q
    ||||||||||||    
T  31694808 cgtatccgtgct 31694819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 370
Target Start/End: Complemental strand, 37598896 - 37598816
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccg 370  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | ||||||| ||||||| ||||    
T  37598896 cgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 40258927 - 40258984
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40258927 cgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 47989556 - 47989448
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||| ||||||| || |||| ||||| ||| || ||||| |    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctg 47989458  T
Q  395 tatccgtgct 404  Q
    ||||| ||||    
T  47989457 tatccatgct 47989448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 381
Target Start/End: Original strand, 48450592 - 48450673
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||| ||||||| ||||||| |||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 401
Target Start/End: Original strand, 2896115 - 2896227
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||| ||||||||||  | ||  ||||||||||||||||||||| |||||||||||||  ||||||| ||||||| ||||||||||||||| |||| |    
T  2896115 cgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccg 2896214  T
Q  389 tgtccgtatccgt 401  Q
    || | ||||||||    
T  2896215 tgactgtatccgt 2896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 395
Target Start/End: Original strand, 5927336 - 5927440
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtg 390  Q
    |||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||  |||  || ||||||| ||||||| |||||||||||| ||     
T  5927336 tgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgta 5927435  T
Q  391 tccgt 395  Q
    |||||    
T  5927436 tccgt 5927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 24577186 - 24577238
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 10577729 - 10577844
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||| | ||||||| | ||||||||||| ||| ||||||||| | |||  ||||||| ||||||| |||| || ||||||| |||||||||||| |    
T  10577729 cgtgtccgcccccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccg 10577828  T
Q  389 tgtccgtatccgtgct 404  Q
    ||||||||||||||||    
T  10577829 tgtccgtatccgtgct 10577844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 1815322 - 1815240
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||  | ||||||| ||||||| |||||    
T  1815322 cgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 5944342 - 5944249
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt--ttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| || |||| ||||||| || |||| ||||||| ||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtc 5944249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 1704992 - 1705053
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcgg 1705053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 357
Target Start/End: Complemental strand, 13436556 - 13436455
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||||| |||||||||| |||||   |||||||||||||| |||| | ||||||||||||||||||||||||  | |||||||||||  |||||    
T  13436556 agcacggacacttctcggattagtcgtgttctacgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcg 13436457  T
Q  356 gc 357  Q
    ||    
T  13436456 gc 13436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 404
Target Start/End: Original strand, 18190103 - 18190209
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||        ||  ||||||||||||||| ||||||||||||  |    
T  18190103 gtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattatta--------ggtgtgtcagtatccgtgtcgtgtccggtgtccat 18190194  T
Q  390 gtccgtatccgtgct 404  Q
    |||||||||| ||||    
T  18190195 gtccgtatccatgct 18190209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 28273089 - 28273158
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||| | |||| ||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagt 28273158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 12443423 - 12443537
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||| || |||||||||||| ||||| |  ||||||||||| | ||| |  |||||||||||||||||||||||| |||||||||||||| |||||    
T  12443423 agcacggatacccctcggattaggtgtgtctcg-gtgtccgacac-gtcacatacaattacactgaattatgtgattttctcaaattattagctgtgtcg 12443520  T
Q  356 gcatgtcagtatccgtg 372  Q
    || |||| |||||||||    
T  12443521 gcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 256 - 356
Target Start/End: Original strand, 24334670 - 24334767
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatg-tgattttttcaaattattagctctgtc 354  Q
    |||||||||||| || ||||||||||||    ||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||| ||||    
T  24334670 agcacggacactacttggattaggcgtg----acgtgtccgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtc 24334765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 36878526 - 36878450
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||    
T  36878526 cgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 382
Target Start/End: Original strand, 5376500 - 5376587
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccgg 382  Q
    |||||||||||||| ||||||||||||||||||| ||||| | |||||||||||  ||||||| ||| ||| ||||||| ||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgg 5376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 15323215 - 15323124
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    |||||||  ||||||||| |||||||||||||||||||||||||| || | ||| ||||||||| ||| ||| |||||||||||| ||||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtccgtgtcc 15323124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 21378635 - 21378576
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcgg 21378576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 403
Target Start/End: Complemental strand, 38503378 - 38503271
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||||||||| | ||||||||||||| ||| ||||||| |||||||||||||  ||||||  ||| ||| |||||||  ||||| ||||| ||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgt 38503279  T
Q  396 atccgtgc 403  Q
    ||||||||    
T  38503278 atccgtgc 38503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 18556456 - 18556534
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||| | ||||||||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||||| |||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 18556534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 404
Target Start/End: Original strand, 3490353 - 3490493
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||||| ||||||||||  ||||| ||  |||| ||||| |||||||||||||||||||||| ||||  |||| |||||||||||||  |||||    
T  3490353 agcacggacacttctcggattagatgtgtcccaa-tgtcggacac-gacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcg 3490450  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    || |||||      |||| |||||||||||| || ||||||||||||||    
T  3490451 gcgtgtca------gtgtcgtgtccggtgtctgtatccgtatccgtgct 3490493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 1864873 - 1864941
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||| ||||||||||| || ||||||    
T  1864873 acgtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 401
Target Start/End: Original strand, 10572591 - 10572695
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    |||||||||| | ||||||||| ||||||||||||||| ||||||||||||   ||||||| ||||||| | | ||| |||||||||||| || |||||     
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T
Q  397 tccgt 401  Q
    |||||    
T  10572691 tccgt 10572695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 381
Target Start/End: Original strand, 14359529 - 14359607
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |||| || || |||| |||||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccg 14359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 40181935 - 40181877
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||| || | ||||||||||||||||||||||||| |||||||||||||    
T  40181935 gtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 7918211 - 7918320
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||| ||||| | ||||||||||||||||||||||||| ||||||||||||   |||| || ||||| | || |||| ||||||||||||  |||| |    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccatgtctg 7918310  T
Q  395 tatccgtgct 404  Q
    || |||||||    
T  7918311 taaccgtgct 7918320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 17778605 - 17778549
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||    
T  17778605 cgacaccgacacttgtaattacactg---tatgtgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 35919232 - 35919317
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacacc-----gacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||      ||||||| |||||||||||||||||||||||||||    
T  35919232 agcacggacagtcctccgattaggcgtgtcccgcgtgtccgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 52903318 - 52903257
Alignment:
Q  285 cacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||| | |||||||||    
T  52903318 cacacgtgtccgacaccgacacatataattacactgaattatatgattttattaaattatta 52903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 5898260 - 5898328
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    |||||| ||||||||| | | ||||||||||||||||||||||||||||| |||||||||  |||||||    
T  5898260 cgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggc 5898328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 6332729 - 6332678
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattattag 6332678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 6415002 - 6415105
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||||||||| | |||||| |||| ||||||||||||| |||||| ||||||  ||||||| ||||||| |||     |||||||||||  ||||||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtcc-----gtgtccggtgttcgtgtccgt 6415096  T
Q  396 atccgtgct 404  Q
    |||||||||    
T  6415097 atccgtgct 6415105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 404
Target Start/End: Complemental strand, 18471355 - 18471248
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgatt--ttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgta 396  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||| |  |||| | ||||||| || |||| | || |||||| ||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgtatccgatatccgtgtccata 18471256  T
Q  397 tccgtgct 404  Q
    || |||||    
T  18471255 tctgtgct 18471248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 21621021 - 21620973
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  21621021 acgtgtccgacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 34298480 - 34298392
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatc 398  Q
    ||||||||||||||||||||||||| ||||||||||||   ||||||  ||||||| ||||||| ||||| |||||  ||||| |||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgtacgtgtctgtatc 34298392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 2288131 - 2288218
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||| |||| ||||||||||||||||| | || ||||||||||||||||| |  ||||||| |||||||||||||||| | |||||||||    
T  2288131 agcactgacattcctcggattaggcgtg-ctcaggtgtccgacaccgacacat--aattacattgaattatgtgattttcttaaattatta 2288218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 6427523 - 6427450
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt---ttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||| |||||||||| ||||| ||||||||||||||   ||||||||||||||| | |||||||||||||||    
T  6427523 cgacactgacacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtcggcatgtcagt 6427450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 20157350 - 20157441
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||| | | ||||||||||||||||||||||| ||| |||||||||  |||||   |||||||  |||||| ||||||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtc 20157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 23738735 - 23738676
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    ||||| |||| | ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 23738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 25452112 - 25452215
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||||| |||| |||||||||||  |  ||||| ||||||||||| |  ||||||||||||||||| |||||| |||||||||||||  ||| |    
T  25452112 agcacggacactgctcgaattaggcgtgttccg-gtgtctgacaccgacacat--aattacactgaattatgagattttctcaaattattagcagtgttg 25452208  T
Q  356 gcatgtc 362  Q
    |||||||    
T  25452209 gcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 32434718 - 32434777
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||||||| | ||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcgg 32434777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 6427409 - 6427323
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||| |||| | |||||||| |||||||||||||||| |||||||||||||  ||| ||| ||||||| ||||||  |||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 14332636 - 14332694
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||||||| || | |||||||||| |||||||||||||| ||||||||||||    
T  14332636 cgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 391
Target Start/End: Original strand, 15641048 - 15641126
Alignment:
Q  313 ttacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    ||||||||||| |||||||||| | |||||||||||  ||||||||||||||| |||||||  |||||| |||| ||||    
T  15641048 ttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgt 15641126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 386
Target Start/End: Original strand, 19562622 - 19562711
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||| |||| | ||||||||||||| |||| |||||| |||||||||||||  ||||||| ||||||| | |||| |||||||||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtg-tgtgtccggtgtc 19562711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 32461465 - 32461515
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  32461465 acaccaacacttgtaattacattaaattatgtgattttttcaaattattag 32461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 383
Target Start/End: Complemental strand, 1262928 - 1262855
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggt 383  Q
    |||||| | |||||||||||||||| |||||||||||||| ||||||| |||| || | ||||| |||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggt 1262855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 9629900 - 9629953
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||||||||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattagc 9629953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 34315767 - 34315686
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtcc 380  Q
    |||||||| | ||||||||| |||||||||  |||||| |||   |||||| ||||||||||||||||||||||| ||||||    
T  34315767 accgacacatataattacaccgaattatgtagttttttaaaaaatttagctgtgtcggcatgtcagtatccgtgtcgtgtcc 34315686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    |||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 9828103 - 9828051
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||| |  |||||||||||||||||||||||| ||||||||||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 13997940 - 13997872
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||| | ||||||||||||||||||||||||||| |||| |||| |  ||||||| |||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagt 13997872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 378
Target Start/End: Original strand, 16927200 - 16927268
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgt 378  Q
    ||||||||||||||||| |||||||||||||||||||||| || || | ||||||| || |||| ||||    
T  16927200 taattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 404
Target Start/End: Original strand, 23531740 - 23531887
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||| ||||||||| ||||| ||||||  || ||||| ||| |  ||| || |||||||| ||||||||||||| ||||||||||||||||  | | |    
T  23531740 agcacgaacactcctccgattaagcgtgtttca-gtgtcggacgcgaacatttataattacattgaattatgtgatattttcaaattattagcagtattg 23531838  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
       |||| || ||||| | |||||| ||||| |||||||||||||||||    
T  23531839 aagtgtcggtgtccgtatcgtgtccagtgtccgtgtccgtatccgtgct 23531887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 27471567 - 27471619
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||| |||| |||||||||||||||||||||| |||| |||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagc 27471619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 396
Target Start/End: Complemental strand, 28663667 - 28663562
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttc----aaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtg 390  Q
    |||||||||||||||||||||||  |||||||||||||||||     |||||||  | | |||||||||||| || ||||||| ||||| |||||  |||    
T  28663667 cgacaccgacacttgtaattacatagaattatgtgatttttttttttaaattatcggttgtgtcggcatgtctgtgtccgtgtggtgtctggtgttcgtg 28663568  T
Q  391 tccgta 396  Q
    ||||||    
T  28663567 tccgta 28663562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 30749904 - 30749860
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  30749904 gtgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 30771355 - 30771311
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  30771355 gtgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 8010293 - 8010344
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctg 352  Q
    |||||||| |||||| |||||||||| | |||||||||||||||||||||||    
T  8010293 cgacacttataattatactgaattatataattttttcaaattattagctctg 8010344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 356
Target Start/End: Complemental strand, 23653040 - 23652997
Alignment:
Q  313 ttacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||||| |||||||||||||||||||||||||| ||||||    
T  23653040 ttacactgaagtatgtgattttttcaaattattagctttgtcgg 23652997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 25272541 - 25272494
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaatt 342  Q
    |||||||||||||| |||||||||| |||||||||||||| |||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 357
Target Start/End: Original strand, 29144365 - 29144420
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    ||||||||||||||||||| ||||| |  ||||||||||||||||||| |||||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagctgtgtcggc 29144420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 39953141 - 39953208
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    ||||||||||||||||| |  ||||||||| |||||||||||||| | |||||||||||  |||||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggc 39953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 2218341 - 2218264
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtc-----cgacaccgacacttgtaattacactgaattatgtg 329  Q
    |||||||||||||||| |||||||||||||  | |||||     ||||||||||||||||||||||||| |||||||||    
T  2218341 agcacggacactcctcagattaggcgtgtccta-gtgtcggacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 404
Target Start/End: Original strand, 21366039 - 21366129
Alignment:
Q  314 tacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||||||||| ||||||| |||||||||||| || |||| |||| || | ||||| |||| ||||||   ||||||||| ||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgttcatgtccgtatgcgtgct 21366129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 2283725 - 2283676
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    ||||||| |||||| |||||||| ||||| ||||||||||||||||||||    
T  2283725 cgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 11605943 - 11605988
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||| ||||||| ||||||||||| |||||||||||||||||||||    
T  11605943 acacatgtaatttcactgaattatatgattttttcaaattattagc 11605988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 334
Target Start/End: Original strand, 17705552 - 17705625
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||||||| ||||| ||||||| |    ||||||||| ||||| | |||||||||||||||||||||||||    
T  17705552 agcacggacactcctcagattaagcgtgtcgc----gtccgacac-gacacatataattacactgaattatgtgatttt 17705625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 17831548 - 17831601
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||| |||||||||| |||||||||||||  ||||||| |||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 21530754 - 21530697
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||||| |||||| ||  |||||| ||||||| |||||||||||    
T  21530754 cgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 25361945 - 25361896
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    |||||| ||||| | ||||||||||||||||||||||||| |||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 30173762 - 30173803
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  30173762 cgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 34371772 - 34371720
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| | ||||||||||||||||||||||||| || ||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctc-aattattagc 34371720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 38075966 - 38076023
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||| | | |||||||||| |||||||||||  |||||||||||||    
T  38075966 tgtccgacaccgacacatatgattacactgacttatgtgatttactcaaattattagc 38076023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 395
Target Start/End: Original strand, 39130762 - 39130867
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    ||||||||||||||||| | |||||||||| |||||| | ||||| | |||||||||    |||| || ||||| ||||| ||| |||||||||||| ||    
T  39130762 gtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgt 39130861  T
Q  390 gtccgt 395  Q
     |||||    
T  39130862 atccgt 39130867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 46940754 - 46940834
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacac-cgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||| ||||||||||||||||||||||  |  ||||| ||||| ||| ||||||||||||||| |||||||| |||||||    
T  46940754 agcacgaacactcctcggattaggcgtgt-tccggtgtcggacacgcgaaacttgtaattacacttaattatgttatttttt 46940834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 48548018 - 48548071
Alignment:
Q  351 tgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||| ||||| | ||||| |||||||||||||| |||||||||||||||||    
T  48548018 tgtcggcgtgtcattgtccgtattgtgtccggtgtccgtgtccgtatccgtgct 48548071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 15449232 - 15449272
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttt 335  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  15449232 cgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 386
Target Start/End: Complemental strand, 19324606 - 19324530
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||||||||||||| ||||||||| |||  ||||| | | |||||  | ||| |||||||||||||    
T  19324606 taattacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtgcctgtgctgtgtccggtgtc 19324530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 25098570 - 25098622
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    ||||||||||||||||||||||||| ||||||||| |||  ||||||| ||||    
T  25098570 taattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 346
Target Start/End: Original strand, 9449024 - 9449059
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattatta 346  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9449024 aattatactgaattatgtgattttttcaaattatta 9449059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 17754352 - 17754317
Alignment:
Q  313 ttacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||| |||||||||||||||||||    
T  17754352 ttacactgaattatgtaattttttcaaattattagc 17754317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 22947843 - 22947746
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtg--tccgacac-----cgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||||||||||||||| || |||  ||| ||||     ||||||||||||| ||  |||||||||| ||||| ||||||||||||    
T  22947843 agcacggacactcctcggattaggcgtgtc-caggtgtctccaacaccaacacgacacttgtaataactttgaattatgtaattttctcaaattattag 22947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 30359441 - 30359398
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||    
T  30359441 cgacacttgcagttacactaaattatgtgattttttcaaattat 30359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 37055866 - 37055909
Alignment:
Q  305 acttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  37055866 acttgtaattacactaaattatgtaattttctcaaattattagc 37055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 9033022 - 9033060
Alignment:
Q  310 taattacactgaattatgtga-ttttttcaaattattag 347  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  9033022 taattacactgaattatgtgatttttttcaaattattag 9033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 10233310 - 10233260
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||| ||||| | ||||||||||||||||||||||||| |||| |||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 30847737 - 30847787
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||| |||||||||| |||||||||||||||||||  |||| |||||||    
T  30847737 attacattgaattatgtcattttttcaaattattagcagtgtcagcatgtc 30847787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 48148037 - 48148111
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcggcatgtcagtatc 368  Q
    |||||||||||  | ||||||||||||||||| ||| |||||| |||||||||||  ||||  ||||||||||||    
T  48148037 cgacaccgacatatataattacactgaattatatgatttttttaaaattattagcggtgtcaacatgtcagtatc 48148111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 404
Target Start/End: Original strand, 609482 - 609567
Alignment:
Q  319 tgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    |||||||||| ||||| ||||||||||||   ||||||| ||||||| |   ||| ||||||| |||| |||||||||| ||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtgtccgtatacgtgct 609567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 16297227 - 16297256
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  16297227 agcacggacactcctcggattaggcgtgtc 16297256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 20608789 - 20608708
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    ||||||| || |||||||| ||||||||||||||| | |  | | ||| ||| |||||||||||||| || |||||||||||    
T  20608789 taattaccctaaattatgttattttttcaaattatcaacgttattggcgtgttagtatccgtgttgtatctggtgtcagtgt 20608708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 21365998 - 21366027
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  21365998 agcacggacactcctcggattaggcgtgtc 21366027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 22515833 - 22515862
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  22515833 agcacggacactcctcggattaggcgtgtc 22515862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 346
Target Start/End: Original strand, 22794084 - 22794129
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||| | ||||||||||| ||||||| |||||||||||||||||    
T  22794084 cgacacctataattacactgtattatgtcattttttcaaattatta 22794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 29163375 - 29163420
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||||||||| | |||||| | ||||||||||||||||    
T  29163375 cgtgtccgacaccgacacatataattaaattgaattatgtgatttt 29163420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 34712383 - 34712436
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||| ||||| | |||||||||| |||||||| ||||| |||||||||||||    
T  34712383 cgacactgacacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #123
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 37598944 - 37598915
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  37598944 agcacggacactcctcggattaggcgtgtc 37598915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #124
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 42359395 - 42359424
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  42359395 agcacggacactcctcggattaggcgtgtc 42359424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #125
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 47989621 - 47989592
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  47989621 agcacggacactcctcggattaggcgtgtc 47989592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #126
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 8117092 - 8117052
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||| | ||||||||||||||||||||||||| ||||||    
T  8117092 gacaccaatacttgtaattacactgaattatgtgttttttt 8117052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #127
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 10474997 - 10475045
Alignment:
Q  315 acactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    |||||||||||||||||||| |||| ||||||||  ||||||| |||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtgtca 10475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #128
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 14248891 - 14248837
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||| ||||| |  |||||||||||||||||  ||||||||||||||||||    
T  14248891 cgtgtccgacactgacacat--aattacactgaattatg--attttttcaaattattag 14248837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #129
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Original strand, 16164330 - 16164366
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| | ||||||||||||||||||||||||||    
T  16164330 taattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #130
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 17220014 - 17219954
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||||   || |||||| |||||||| | | |||||||||||||||    
T  17220014 acacgtgtccgacaccgacaaaagttattacattgaattatataagtttttcaaattatta 17219954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #131
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Original strand, 17425108 - 17425144
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||| |||||||||||||||| |||||||||||    
T  17425108 taattacattgaattatgtgattttatcaaattatta 17425144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #132
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 23636044 - 23636096
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatt 342  Q
    ||||| ||||||||||| |  |||||||||||||||||| ||||| |||||||    
T  23636044 gtgtctgacaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #133
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 26238129 - 26238165
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  26238129 attacactgaattatgttattttctcaaattattagc 26238165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 91)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 2438713 - 2438825
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||  |||||| |||||||| ||||||||||| |    
T  2438713 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcagc--gtcagtgtccgtgttttgtccggtgtc-g 2438809  T
Q  389 tgtccgtatccgtgct 404  Q
    ||||||||||||||||    
T  2438810 tgtccgtatccgtgct 2438825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 19536391 - 19536489
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| ||||| | ||||||| ||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 19536489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 256 - 395
Target Start/End: Original strand, 20539638 - 20539774
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||||||||||||| ||||||||| | |     ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  20539638 agcacggacactcctcggatcaggcgtgtctcgcca---cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcg 20539734  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
     | ||||||| ||||||| |||||| ||||| || |||||    
T  20539735 acgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgt 20539774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 373
Target Start/End: Complemental strand, 37559039 - 37558958
Alignment:
Q  292 gtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||    
T  37559039 gtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgt 37558958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 289 - 401
Target Start/End: Complemental strand, 15972938 - 15972826
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  | ||||||| ||||||| ||||||| || || |||||| |    
T  15972938 cgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgtctg 15972839  T
Q  389 tgtccgtatccgt 401  Q
    |||| || |||||    
T  15972838 tgtctgtgtccgt 15972826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 30404844 - 30404928
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||| |||||||    
T  30404844 cgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgt 30404928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 404
Target Start/End: Complemental strand, 18422027 - 18421914
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||  | ||||||| ||||||| ||||||| || |||| ||||| |    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccgatgtca-t 18421929  T
Q  390 gtccgtatccgtgct 404  Q
    |||||||||| ||||    
T  18421928 gtccgtatccatgct 18421914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 21374706 - 21374803
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgt 401  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||| |||     |||||||||||| ||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtcc-----gtgtccggtgtccgtgtccgtatccgt 21374800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 30717530 - 30717608
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgt 30717608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 21624335 - 21624234
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatg-tgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtg 384  Q
    |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||| ||||||| ||||||| || |||| |||| |||||    
T  21624335 acacgtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtg 21624236  T
Q  385 tc 386  Q
    ||    
T  21624235 tc 21624234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 12668423 - 12668502
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgtt 374  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||||| |||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgtt 12668502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 15657923 - 15657816
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |  |||||| ||| ||| ||||||| |||||||||| | ||||| |    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtgaccgtgtcgg 15657824  T
Q  395 tatccgtg 402  Q
    | ||||||    
T  15657823 tgtccgtg 15657816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 38117154 - 38117229
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||| |||||||    
T  38117154 gtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagt 38117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 404
Target Start/End: Complemental strand, 21616806 - 21616712
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||| |||| || ||||||| |||||  ||||| |||||||||||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgct 21616712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 18276579 - 18276471
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    |||||||||||   |||||||||||||||| |||||||| |||||||||||||  ||||||||| ||||| || || | |||||||||||| ||||| ||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgt 18276480  T
Q  396 atccgtgct 404  Q
    |||||||||    
T  18276479 atccgtgct 18276471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 18841007 - 18841099
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||| || ||||||| ||| ||| |||||||    
T  18841007 cgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccg 18841099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 20473387 - 20473311
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||| | |||||||||||||||    
T  20473387 cgtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagt 20473311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 14996224 - 14996302
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||||| |||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgt 14996302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 23058442 - 23058552
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||  | ||| ||| ||||| | ||||||| ||||| ||| || ||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtcaggtatccgtgtcc 23058541  T
Q  394 gtatccgtgct 404  Q
    || ||||||||    
T  23058542 gtgtccgtgct 23058552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 30335476 - 30335367
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||||||||| | ||||||| ||  ||| ||||||| ||||| |   || |||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctgagatccgtgtccg 30335377  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  30335376 tatccgtgct 30335367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 5040799 - 5040728
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatt--ttttcaaattattagctctgtcggca 358  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| | ||||||    
T  5040799 cgtgtccgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgtatcggca 5040728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 6940320 - 6940236
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||| || ||||||||||||||||||||| |||||||| | ||||| |||||||||||| ||||||| ||||||| |||||||    
T  6940320 cgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgt 6940236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 31284114 - 31283998
Alignment:
Q  289 cgtgtccgacaccgacacttg-taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtca 387  Q
    ||||||| |||||||||| |  |||||||| || ||||||||||||| |||||||||||||  ||||||| ||| ||| | |||||| |||||||||||     
T  31284114 cgtgtccaacaccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtcc 31284015  T
Q  388 gtgtccgtatccgtgct 404  Q
    ||||||||||| |||||    
T  31284014 gtgtccgtatctgtgct 31283998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 36756344 - 36756447
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||||||| | ||||| | ||||||| || |||| || |||| |||  |||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgttcgtgtccg 36756443  T
Q  395 tatc 398  Q
    ||||    
T  36756444 tatc 36756447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 37419802 - 37419727
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccg 370  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||  ||||||| ||||||| ||||    
T  37419802 cgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 354
Target Start/End: Original strand, 11223864 - 11223922
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 24894440 - 24894370
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||    
T  24894440 acacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 31018683 - 31018558
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    ||||| ||||||||||||||||| ||     |||||||||||||||||||| | |||||||||| ||| |||||||||| | |||||||||||  ||| |    
T  31018683 agcactgacactcctcggattagacg-----cacgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttg 31018589  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    || ||||||| ||| ||| || |||||||||    
T  31018588 gcgtgtcagtgtccatgtcgtatccggtgtc 31018558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 34221502 - 34221575
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||| ||  |||||||||  ||||||||||||||||||| ||||||||| |||||||||||||    
T  34221502 ccgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtcggcatatcagtatccgtgt 34221575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 379
Target Start/End: Original strand, 36409642 - 36409711
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    |||||||||| |||||||||||||||||||||||| |||  ||||||||||| ||||||||||| |||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 974806 - 974754
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattag 974754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 42832238 - 42832329
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||| |||||||||| |||||||||||||| |  | ||| ||||||||||||| ||||||||||||| ||||| ||||| |||||||||||||    
T  42832238 agcaaggacactccttggattaggcgtgtcccg-gagtcggacaccgacacttataattacactgaaatatgtaattttctcaaattattagc 42832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 34691799 - 34691858
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 34714211 - 34714270
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 364
Target Start/End: Original strand, 37411238 - 37411313
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcag 364  Q
    ||||| ||||| |||||| | |||| |||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  37411238 cgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 377
Target Start/End: Original strand, 4882696 - 4882778
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtg 377  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||| ||||||  | ||| | |||||||||| ||||||||    
T  4882696 cgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtcagtatctgtgttgtg 4882778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 5367257 - 5367199
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||    
T  5367257 cgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 379
Target Start/End: Original strand, 12940941 - 12941019
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||| | ||||  | ||||||| ||||||| |||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 381
Target Start/End: Complemental strand, 21091786 - 21091696
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||| ||||| ||||||||||||||||||||| ||||| ||||| | |||||||||||  ||||||  ||||||| ||||| |||||||||    
T  21091786 tgtctgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgtcttgtgtccg 21091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 34337182 - 34337283
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||||||||||||||||||     |||||||||||||||||||||||| | || ||||||| ||||| | ||||||| || | |||| || ||||||||    
T  34337182 gacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgtatacggtatccgtgtccgt 34337276  T
Q  396 atccgtg 402  Q
    |||||||    
T  34337277 atccgtg 34337283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 12224288 - 12224212
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtga--ttttttcaaattattagctctgtcggcatgtca 363  Q
    ||||||||||||||||||||||||||||| || |||||| ||  ||||||||||||||||||| ||| ||| |||||    
T  12224288 cgtgtccgacaccgacacttgtaattacattggattatgggattttttttcaaattattagctatgttggcgtgtca 12224212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 18255974 - 18256031
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||    
T  18255974 cgtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattatta 18256031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 20242722 - 20242811
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| | |||  ||||| | ||||||| ||||||| ||| ||| |||||    
T  20242722 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 26769569 - 26769467
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    |||||||||||||||||||||||   || ||||||| ||||||||||||||| | |||||||      || || |||| |||||||||||| ||||||||    
T  26769569 gacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggc------gtgtctgtgtcgtgtccggtgtccgtgtccgt 26769476  T
Q  396 atccgtgct 404  Q
    |||||||||    
T  26769475 atccgtgct 26769467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 33153483 - 33153410
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatc 368  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| ||||| | | ||||| ||||| ||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgtcaatatc 33153410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 34784982 - 34785091
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | |||||||||| |||||||||||||| | |||  ||||| | ||||||  ||||||| ||||||| ||||| || ||| |||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccg 34785081  T
Q  395 tatccgtgct 404  Q
    |||| |||||    
T  34785082 tatctgtgct 34785091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 18420436 - 18420532
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    |||||||||||| ||||| || |||||||||||||||| |||||||||||||  ||| ||| |||||||||  || | |||| ||||||| ||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtatatgtctcgtgttcggtgtccgtgtcc 18420532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 386
Target Start/End: Original strand, 21782833 - 21782909
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||| |  |||| |||||| |||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtc 21782909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 23718087 - 23718007
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||| ||||||||| | ||||||||||||||||||||| ||| |||||||||||||  ||||||  ||||||| |||||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgt 23718007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 24105759 - 24105679
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    |||| ||||||||| | ||||||||||||||||||||| ||| |||||||||||||  ||||||  ||||||| |||||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgt 24105679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 381
Target Start/End: Complemental strand, 28596534 - 28596445
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgat-tttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||| |||||||||||| ||||||||| |||||||    ||||||| ||||||| ||||| | ||||||| |||||||    
T  28596534 cgtgtccgacaccgacacttataattacactgacttatgtgatgtttttca----attagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 28596445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 5473422 - 5473336
Alignment:
Q  262 gacactcctcggattaggcgtgtcacac--gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||  ||||| | |  ||||||||||||||||| |   ||||||| |||||||||||||||||||||||||||    
T  5473422 gacactcctcggattagaggtgtcccgctcgtgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 28677953 - 28677906
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcggc 28677906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 373
Target Start/End: Complemental strand, 39323316 - 39323245
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||  ||||| | | ||||| |||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgt 39323245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 404
Target Start/End: Complemental strand, 28412394 - 28412300
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    ||||||||||||||||||||||||| ||||||||||| |  ||| | | ||| ||| ||||||| ||||| |||||| |||||| ||| ||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgct 28412300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 4332970 - 4332889
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    |||||||| ||||||||||||||||  |||||||||| |  ||||||||||| |||||| |||  |||||||||||| ||||    
T  4332970 taattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgtgt 4332889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 29176487 - 29176544
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||| ||||| |||||| |||||||||||||||||||||  ||||||||||||||    
T  29176487 cgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattatta 29176544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 44860379 - 44860326
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| | |||||||||||||||||| |||||| |||||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattattagc 44860326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 16069269 - 16069332
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||||| ||||||||| ||||||||| |  ||||||| ||||||| |||||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgt 16069332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 380
Target Start/End: Complemental strand, 29664054 - 29663983
Alignment:
Q  310 taattacactgaattatgtg-attttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtcc 380  Q
    ||||||||||||||||| |  ||||||||||||||||||| |||||| ||||||||| || |||| ||||||    
T  29664054 taattacactgaattatatatattttttcaaattattagcactgtcgacatgtcagtgtctgtgtcgtgtcc 29663983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 43585999 - 43586050
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 340  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  43585999 cgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 43586050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 332
Target Start/End: Complemental strand, 44635558 - 44635520
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgatt 332  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  44635558 ccgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 896275 - 896181
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||| ||||||| | | |||||| |||| ||||||||||| ||||| |||||||  ||||||| ||||||| |  |||| ||||||||||||    
T  896275 gtgtccgacgccgacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt--gtgtcgtgtccggtgtc 896181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 386
Target Start/End: Original strand, 10535765 - 10535850
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||| | ||||||||||||||||| ||||| ||||||||||| |  ||||||| | | |||||| |||| |||| |||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgtacggtgtc 10535850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||| |||||||||| |||||||||| ||||| |||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 18622665 - 18622613
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||| |||| | ||||||||||||||||||||||||| | ||||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgattttattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 18889592 - 18889644
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||| | | ||||||||||||||||||||||| |||| ||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttattagc 18889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 23921317 - 23921261
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||| | | || ||||||||||||||||||| ||||| |||||||||||    
T  23921317 gtgtccgacaccaatatttataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 27460070 - 27459995
Alignment:
Q  311 aattacactgaattatgtgatttttt-caaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||| |||||||||||| ||||||| ||||||||||||| ||||||| ||||||| ||| | |||||||| |||||    
T  27460070 aattatactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtcc-tattgtgtcctgtgtc 27459995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 27460101 - 27460065
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattat 326  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27460101 gtgtccgacaccgacccttgtaattacactgaattat 27460065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 31808134 - 31808066
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||| ||||| | ||||||||||||||||||||||||| | |||||||||||  ||||||  |||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagt 31808066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 33884115 - 33884071
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||    
T  33884115 gtgttcgacaccgacacttgtaattacactgaatcatgtcatttt 33884071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 38442366 - 38442314
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||| |||||| | |||||||||||||||||| |||| |||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattag 38442314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 376
Target Start/End: Complemental strand, 21148485 - 21148430
Alignment:
Q  321 aattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgt 376  Q
    |||||||||||||| ||||||||| | |  ||| ||||||||||||||||||||||    
T  21148485 aattatgtgattttctcaaattatcaacgttgttggcatgtcagtatccgtgttgt 21148430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 23354669 - 23354748
Alignment:
Q  312 attacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
    |||||||| |||||| | ||||| ||||||||||| || |||| ||||||| || |||||||  ||||||||||| ||||    
T  23354669 attacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtccggtgtccgtgt 23354748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 2438665 - 2438694
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  2438665 agcacggacactcctcggattaggcgtgtc 2438694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 20922922 - 20922967
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||| ||||| | |||||||||| ||||||||||||||    
T  20922922 cgtgtccgacacagacacatataattacactaaattatgtgatttt 20922967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 25846785 - 25846748
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  25846785 taattacactgaatcatgtgattttctcaaattattag 25846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 26769635 - 26769606
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  26769635 agcacggacactcctcggattaggcgtgtc 26769606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 371
Target Start/End: Original strand, 27286307 - 27286368
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    |||||||||| ||||||||||| || |||||||||||||  ||||||| | ||||| |||||    
T  27286307 taattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgt 27286368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 336
Target Start/End: Original strand, 29367381 - 29367410
Alignment:
Q  307 ttgtaattacactgaattatgtgatttttt 336  Q
    ||||||||||||||||||||||||||||||    
T  29367381 ttgtaattacactgaattatgtgatttttt 29367410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 30298444 - 30298498
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||||| | |||||||||    
T  30298444 gtgtccgacaccgacacatg--attacactgaattatgtcattttattaaattatta 30298498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 37419867 - 37419838
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  37419867 agcacggacactcctcggattaggcgtgtc 37419838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 38355888 - 38355933
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 341  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 39279732 - 39279683
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||| | ||||||||||||||||| ||||||| ||| |||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattatta 39279683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 40361748 - 40361805
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||| |||||| |||  | |||||||||| |||||||| |||||||||||||||||    
T  40361748 cgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 2331834 - 2331802
Alignment:
Q  314 tacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||||| |||||||||||    
T  2331834 tacactgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 11308021 - 11308053
Alignment:
Q  312 attacactgaattatgtgattttttcaaattat 344  Q
    ||||||||||||||||| |||||||||||||||    
T  11308021 attacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 32749825 - 32749869
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaa 339  Q
    |||||| ||||||| | ||||||||||||||||||||||| ||||    
T  32749825 cgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 34006986 - 34007042
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||| |||||||||| | | ||||||||||||||||| | ||| |||||||||||    
T  34006986 gtgtcccacaccgacacctatgattacactgaattatgtcaatttctcaaattatta 34007042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 35449557 - 35449521
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  35449557 taattacactgaattctgtgattttctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 456 - 571
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||| | ||||| ||||||  |||| ||||||| |    
T  456 cgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccg 555  T
Q  389 tgtccgtatccgtgct 404  Q
    ||||||||||||||||    
T  556 tgtccgtatccgtgct 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 5e-35; HSPs: 117)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 7171566 - 7171452
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||| |||||||  |||| ||||||||||||||||||||||| |||||||||||| |    
T  7171566 cgtgtccgacaccaacacttgtaattacaccgaattatatgattttt-caaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctg 7171468  T
Q  389 tgtccgtatccgtgct 404  Q
    ||||||||||||||||    
T  7171467 tgtccgtatccgtgct 7171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 28918060 - 28917969
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||    
T  28918060 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtc 28917969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 16000009 - 16000125
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtca 387  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||| | ||||||| ||||||| || |||| |||| |||||||     
T  16000009 acgtgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtcc 16000108  T
Q  388 gtgtccgtatccgtgct 404  Q
    |||||||||||||||||    
T  16000109 gtgtccgtatccgtgct 16000125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 404
Target Start/End: Original strand, 10335251 - 10335395
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||| |||||||||  ||||||||||||    ||| |||||||||||||||||| ||||||| || ||||||| |||||||||||||||| | |||||    
T  10335251 agcacgaacactcctccaattaggcgtgtc----gtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcg 10335346  T
Q  356 gcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    || ||||||| ||||||| |||||||||||| |||| ||||||||||||    
T  10335347 gcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgct 10335395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 15796294 - 15796403
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||| ||||| | ||||||| |||||||||||| ||||||     
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtcca 15796393  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  15796394 tatccgtgct 15796403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 26492199 - 26492291
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  26492199 cgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 35994732 - 35994846
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtca 387  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| | ||| ||| ||||||||||||     
T  35994732 acgtgtccgacac-gacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtcc 35994829  T
Q  388 gtgtccgtatccgtgct 404  Q
     ||||||||||||||||    
T  35994830 atgtccgtatccgtgct 35994846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 8383325 - 8383216
Alignment:
Q  286 acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgt 385  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||  ||||||| ||||| | ||||||| |||||| ||||    
T  8383325 acacgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgt 8383226  T
Q  386 cagtgtccgt 395  Q
    | ||||||||    
T  8383225 ccgtgtccgt 8383216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 8587011 - 8587112
Alignment:
Q  285 cacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtg 384  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||| ||||||| |||||||  |||||||||    
T  8587011 cacacatgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtg 8587110  T
Q  385 tc 386  Q
    ||    
T  8587111 tc 8587112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 55401140 - 55401043
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| | ||||| ||||||| || |||||||||    
T  55401140 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtc 55401043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 10955017 - 10954941
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  10955017 cgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 10954941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 402
Target Start/End: Original strand, 4990918 - 4991074
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtc-----------cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    |||||||||||||||||||||||||||||| ||||||||           |||| ||||||||||||||||||||||||||||| ||||| ||||| |||    
T  4990918 agcacggacactcctcggattaggcgtgtc-cacgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaaactat 4991016  T
Q  345 tagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtg 402  Q
    ||||  ||||||  ||||||| ||||||| |||| ||||||| |||||||||| ||||    
T  4991017 tagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgtccgtatacgtg 4991074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 21479178 - 21479074
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||      |||| |||||||||||| ||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtca------gtgtcgtgtccggtgtccgtgtcc 21479085  T
Q  394 gtatccgtgct 404  Q
    |||||| ||||    
T  21479084 gtatccatgct 21479074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 26508166 - 26508083
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| || | |||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 750618 - 750728
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc-agtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||||| | ||||| | |||| ||| ||||||| |||||||||||| ||||||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgtgtcc 750717  T
Q  394 gtatccgtgct 404  Q
    |||||||||||    
T  750718 gtatccgtgct 750728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 404
Target Start/End: Original strand, 3164033 - 3164134
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccgtg 402  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| ||||| | || || | ||||||| |||||||||||| ||||| |||||||||    
T  3164033 acacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtg 3164132  T
Q  403 ct 404  Q
    ||    
T  3164133 ct 3164134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 354
Target Start/End: Original strand, 51206348 - 51206412
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 4987294 - 4987361
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  4987294 caccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 49651786 - 49651853
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 404
Target Start/End: Original strand, 10268481 - 10268595
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||| ||| ||| ||   || |||| ||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgt 10268580  T
Q  390 gtccgtatccgtgct 404  Q
    || ||||||||||||    
T  10268581 gttcgtatccgtgct 10268595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 404
Target Start/End: Original strand, 24205037 - 24205150
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    ||||||||||| ||||||| ||||||||||| ||||||| ||||| ||||||||||| |  ||||||| ||||||| ||||||| |||||||||||| ||    
T  24205037 gtgtccgacac-gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T
Q  390 gtccgtatccgtgct 404  Q
    ||| || ||||||||    
T  24205136 gtctgtgtccgtgct 24205150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 25948887 - 25948965
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||  | ||||||||||||| |||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgt 25948965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 20503530 - 20503454
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | | ||||||| |||||||    
T  20503530 cgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagt 20503454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 295 - 371
Target Start/End: Complemental strand, 27505305 - 27505229
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||| |||| ||||||||    
T  27505305 cgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcggcttgtccgtatccgt 27505229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 1509598 - 1509539
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 7928515 - 7928456
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagc 7928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 14829748 - 14829658
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||| ||||||| || ||||  |||||||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtc 14829658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 21256954 - 21257045
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtc 354  Q
    |||||||||||||||||||||||| ||||| ||||      | ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  21256954 agcacggacactcctcggattaggtgtgtc-cacg------ataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 25775575 - 25775516
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattatta 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25775575 acgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 34910376 - 34910309
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 41961650 - 41961741
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||| | || |||| ||||||| || |||| ||||||||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtc 41961741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 11610622 - 11610496
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacacc----gacacttgtaattacactgaattatgtgattttttcaaattattagctct 351  Q
    |||||||||||||||| ||||||||||||| |   |||| |||||     ||||||||||| ||||||||||||||||||||||| |||||||||||  |    
T  11610622 agcacggacactcctcagattaggcgtgtcccga-tgtcggacacgacttgacacttgtaactacactgaattatgtgatttttttaaattattagcggt 11610524  T
Q  352 gtcggcatgtcagtatccgtgttgtgtc 379  Q
    || ||| |||||||||| ||||||||||    
T  11610523 gttggcgtgtcagtatctgtgttgtgtc 11610496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 14832158 - 14832081
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtg 372  Q
    |||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||| |||| |||||||||    
T  14832158 cgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 34185123 - 34185191
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||| |||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtca 34185191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 14209172 - 14209105
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 14747621 - 14747517
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    |||||| ||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||      |||| |||||||||||| || |||    
T  14747621 cgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatcc 14747528  T
Q  394 gtatccgtgct 404  Q
    |||||||||||    
T  14747527 gtatccgtgct 14747517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 401
Target Start/End: Complemental strand, 25093566 - 25093455
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagt 389  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||| |||||| |||| |  ||||||| ||| ||| || |||| |||||||||||| ||    
T  25093566 gtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgt 25093467  T
Q  390 gtccgtatccgt 401  Q
    ||  ||||||||    
T  25093466 gtttgtatccgt 25093455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 28812574 - 28812507
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||||||| ||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc 28812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 8593206 - 8593136
Alignment:
Q  285 cacacgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt-caaattattagctctgtc 354  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||    
T  8593206 cacacatgtccgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtc 8593136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 404
Target Start/End: Original strand, 10318000 - 10318149
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||| |||||||||  ||||||||||||    ||| ||||||||||||||| || ||||||| ||  |||||| |||||||||||||||||| |||||    
T  10318000 agcacgaacactcctccaattaggcgtgtc----gtgcccgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcg 10318094  T
Q  356 gcatgtca------gtatccgtgttgtgtccggtgtcagtgtccgtatccgtgct 404  Q
    || |||||      || ||||||| |||||||||||| |||| ||||||||||||    
T  10318095 gcgtgtcagtgtccgtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgct 10318149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 38731278 - 38731168
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    ||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||  | ||| |||||| || | | ||| ||||||| |||| ||||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgtacatgtcgtgtccgttgtccgtgtcc 38731179  T
Q  394 gtatccgtgct 404  Q
    | |||||||||    
T  38731178 gcatccgtgct 38731168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 379
Target Start/End: Complemental strand, 14216951 - 14216867
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    |||||| ||||||||||||||||||||||||| |||| |||| |||||||||| | ||||| | ||||||| ||||||| |||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 379
Target Start/End: Complemental strand, 14223080 - 14222996
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtc 379  Q
    |||||| ||||||||||||||||||||||||| |||| |||| |||||||||| | ||||| | ||||||| ||||||| |||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 23916003 - 23915915
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatc 398  Q
    |||||||| | |||| |||||||||||||| || |||||| ||| ||||||||||| || |||| |||||||||||| |||||||||||    
T  23916003 taattacatttaattgtgtgattttttcaagttgttagctgtgttggcatgtcagtttctgtgtcgtgtccggtgtccgtgtccgtatc 23915915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 14979224 - 14979178
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattattagctctgtcggc 357  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggc 14979178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 55213020 - 55212958
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcat 359  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||| || |||||||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcggcat 55212958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 385
Target Start/End: Complemental strand, 3610691 - 3610602
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgt 385  Q
    |||| ||||||| ||||||||||||| |||||| ||||||| ||||||||| || ||| ||| ||||||| || |||| |||||||||||    
T  3610691 gacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccggtgt 3610602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 365
Target Start/End: Complemental strand, 40052425 - 40052321
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgacac--cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgt 353  Q
    |||||| ||||||||||||||||||||||| |  ||||| |||||  |||||||||| ||      |||||||||||||||||||||||||||||| |||    
T  40052425 agcacgaacactcctcggattaggcgtgtcccg-gtgtcggacacgtcgacacttgtgat------gaattatgtgattttttcaaattattagctgtgt 40052333  T
Q  354 cggcatgtcagt 365  Q
    |||| |||||||    
T  40052332 cggcgtgtcagt 40052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 386
Target Start/End: Complemental strand, 25064953 - 25064877
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||| ||||||||||||||||||||| ||||||  ||||||| ||||| | || |||| ||||||||||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtc 25064877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 370
Target Start/End: Original strand, 32400701 - 32400780
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccg 370  Q
    ||||||||||||| ||||||||||||||||   |||||||| || ||||||||||||||||| ||||| | ||||||| ||||    
T  32400701 acgtgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccg 32400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 40993329 - 40993389
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagc 348  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||    
T  40993329 cgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattattagc 40993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 8789544 - 8789599
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 344  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||    
T  8789544 cgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 34307786 - 34307889
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccg 400  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||||  |||| || |||  || || ||||  ||||||||||  ||||||||||||     
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatcca 34307885  T
Q  401 tgct 404  Q
    ||||    
T  34307886 tgct 34307889  T

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Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 40150531 - 40150622
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc-acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||||||||| ||||| || | |||| ||||||||||| | | |||||| |||||||| | ||||| |||||||||||    
T  40150531 agcacggacactcctcggattaggtgtgtcgacgcatgtcagacaccgacacatatgattacattgaattatatcattttctcaaattatta 40150622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 49505148 - 49505207
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| ||||| | |||||||||| |||||||||||||| |||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagc 49505207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 16789071 - 16788993
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||| |||||| ||||||||||||||||| ||||||||| ||||||||| || | ||||  | |||||||||||||    
T  16789071 cgacaccaacacttataattacactgaattatatgatttttttaaattattaactatatcggtgtatcagtatccgtgt 16788993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 17005621 - 17005671
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 386
Target Start/End: Original strand, 32429381 - 32429471
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||| | || ||||| ||||||||||||||||||| | |||||||||||  ||||||  ||||| | | ||||||||||||||||||    
T  32429381 gacaccgatatttataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtc 32429471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 39756295 - 39756225
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||||||||||||| | | |||||||||||||||| |||||||||  | ||||||| |||||||    
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagt 39756225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 3865739 - 3865690
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttca 338  Q
    |||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  3865739 cgtgtcagacaccgacacttgtaattatactgaattatgtgagtttttca 3865690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 9800099 - 9800014
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtcc 380  Q
    ||||||||||||||  |||||||| ||||||||| ||||| ||||||||||||   ||||||| ||||||| | ||||| ||||||    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 11666003 - 11665894
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | |||||||||| |||| ||||||||| |||||||||||||  ||||||  ||| ||| |  |||| |||||||||||| || |||     
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtctgtatcca 11665904  T
Q  395 tatccgtgct 404  Q
    ||| ||||||    
T  11665903 tattcgtgct 11665894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 16789668 - 16789741
Alignment:
Q  313 ttacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||||||| ||||| ||||||||||| || ||||||||| || ||||||||||  | |||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattatctgtgtcggcatctcggtatccgtgtcatctccggtgtc 16789741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 33359823 - 33359750
Alignment:
Q  292 gtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||| |||||||||| ||||||| || |||||||  ||||||||||||||||| |||| || |||||||    
T  33359823 gtccgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagt 33359750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 391
Target Start/End: Original strand, 12674466 - 12674597
Alignment:
Q  260 cggacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatg---tgattttttcaaattattagctctgtcgg 356  Q
    |||||||||||||||| ||||||||| || || |||||||| ||||| || ||||||||||||||||    ||||||| |||||||||||||  ||||||    
T  12674466 cggacactcctcggat-aggcgtgtc-catgtatccgacac-gacacatgcaattacactgaattattatttgattttctcaaattattagcagtgtcgg 12674562  T
Q  357 catgtcagtatccgtgttgtgtccggtgtcagtgt 391  Q
      ||||| | ||||||| ||||| |||||| ||||    
T  12674563 tgtgtcaatgtccgtgtcgtgtctggtgtctgtgt 12674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 35312108 - 35312028
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtcc 380  Q
    ||||||||||||||||||||||||||||| |  |||| |||||||||  | ||||| ||| ||||| ||||||| ||||||    
T  35312108 ccgacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgtgtcgtgtcc 35312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 11252040 - 11251984
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||| ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  11252040 gtgtctgacaccgacacat--aattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 45451618 - 45451559
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||||| | | |||| |||||| ||||||||||| |||||||||||||    
T  45451618 cgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagc 45451559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 5407262 - 5407324
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtg 372  Q
    |||||||| |||||||||||||||| ||||||| |||||  ||||||| |||| |||||||||    
T  5407262 taattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtg 5407324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 8842394 - 8842289
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcag 388  Q
    |||||| ||||||||||  | |||||||||  ||||||||||||||   |||||||||||  ||||||||||||| | ||||||| || ||||||||| |    
T  8842394 cgtgtctgacaccgacatatataattacaccaaattatgtgattttca-aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccg 8842296  T
Q  389 tgtccgt 395  Q
    | |||||    
T  8842295 tatccgt 8842289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 18427010 - 18426956
Alignment:
Q  293 tccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||  | ||||||||| ||||||||||||||||| ||||||||||    
T  18427010 tccgacaccgacatatataattacaccgaattatgtgattttttgaaattattag 18426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 347
Target Start/End: Complemental strand, 29508497 - 29508451
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 1550199 - 1550146
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||| ||||| | ||||||||||||||  |||||||||||||||||||||||    
T  1550199 cgacactgacacctataattacactgaatagtgtgattttttcaaattattagc 1550146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 8039835 - 8039888
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| | ||||||||||||||||| | ||||| |||||||||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagc 8039888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 363
Target Start/End: Original strand, 32804555 - 32804608
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    |||||||||| |||||||||||||| ||||||||||| |  |||||||||||||    
T  32804555 taattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 3865586 - 3865634
Alignment:
Q  325 atgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||| ||||||||||||||||||| ||||||| ||||||| |||||||    
T  3865586 atgtggttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 3865634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 4201440 - 4201404
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||| ||||||||||||||||||||||||||    
T  4201440 taattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 13414560 - 13414489
Alignment:
Q  262 gacactcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||| ||||||| ||||||||| |  ||||||||||||||||| | |||||||| |||||||| |||||||    
T  13414560 gacacttctcggataaggcgtgtccct-gtgtccgacaccgacacatataattacattgaattatttgatttt 13414489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 14028066 - 14027965
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | ||||||||||| ||| ||||||||| | |||  ||||||| ||||||        | ||||||| |||||||||||| |||||||    
T  14028066 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcgg--------tgtccgtgtcgtgtccggtgtccgtgtccg 14027975  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  14027974 tatccgtgct 14027965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 15314876 - 15314924
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 343  Q
    ||||||| |||| | |||||||||| |||||||||||||||||||||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 20691383 - 20691327
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    ||||| ||||||||||| | | ||||||||||||||||| ||||| |||||||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 7614409 - 7614476
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    ||||| |||||||||||  | |||||| |||||||||||||||||| | ||||||||| || ||||||    
T  7614409 cgtgttcgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcgg 7614476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 11658868 - 11658766
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccg 400  Q
    |||||| | |||| ||||||||||||| |||||| ||||||||||| |  ||| ||  ||||||| || |||| |||||| ||||| |||| ||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgtcc-gtgtctgtgttcgtatccg 11658770  T
Q  401 tgct 404  Q
    ||||    
T  11658769 tgct 11658766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 14338477 - 14338528
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 340  Q
    |||||| |||||||||| |||| |||||| |||||||||| |||||||||||    
T  14338477 cgtgtctgacaccgacatttgtgattacattgaattatgtcattttttcaaa 14338528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 22774071 - 22774122
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||||| ||||||||||||| ||||||| ||| || |||||||||    
T  22774071 gacaccgacacttataattacactgaaatatgtgactttgtctaattattag 22774122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 336
Target Start/End: Original strand, 30184108 - 30184147
Alignment:
Q  297 acaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  30184108 acaccgacacatgtaattacactgaattatgtcatttttt 30184147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 35223001 - 35222958
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||||||| | |||||||| ||||||||||||||||    
T  35223001 tgtccgacaccgacacatataattacattgaattatgtgatttt 35222958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 1514671 - 1514609
Alignment:
Q  300 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    ||||||||| |||||||||| ||||||| | || |||||||||||||||  ||||||| ||||    
T  1514671 ccgacacttataattacactaaattatgcgtttctttcaaattattagcggtgtcggcgtgtc 1514609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 5339161 - 5339091
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||||||||  ||||| | |||||||||||||| ||||||||||| |  ||||||| |||| ||||||||    
T  5339161 cgacacttgtttttacattaaattatgtgattttctcaaattattaacaatgtcggcgtgtctgtatccgt 5339091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 9624685 - 9624647
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  9624685 taattacattgaattatgtgattttctcaaattattagc 9624647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 10690277 - 10690315
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  10690277 taattacactgaattatgtgattttctcagattattagc 10690315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 11313815 - 11313853
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagc 11313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 372
Target Start/End: Complemental strand, 12704051 - 12703989
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtg 372  Q
    |||||||||||||||||||| |||| ||||||||||||   ||||||| ||||  ||||||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 380
Target Start/End: Original strand, 14840306 - 14840376
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtcc 380  Q
    ||||||||||||||||||||||||| | |||||||||    ||| ||| |||| |||||||||| ||||||    
T  14840306 taattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtcc 14840376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 15505785 - 15505831
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||||||||| |||||| ||||||||||||||||| | |||||||    
T  15505785 gtgtccgacaccaacacttataattacactgaattatataatttttt 15505831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 373
Target Start/End: Complemental strand, 21720807 - 21720745
Alignment:
Q  311 aattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||||| ||| || ||||||||||| |  ||||||| ||||||| |||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgt 21720745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 23870574 - 23870612
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  23870574 taatcacactgaattatatgattttttcaaattattagc 23870612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 27277853 - 27277891
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagc 27277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 28678362 - 28678292
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||| |  ||||| ||| |||||||||||||| | |||||||||||   ||||||||||||||    
T  28678362 cgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagt 28678292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 2941623 - 2941578
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||    
T  2941623 cgtgtccgacaccgacacatataattacactgtattttgtgatttt 2941578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 8789494 - 8789523
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  8789494 agcacggacactcctcggattaggcgtgtc 8789523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 8842442 - 8842413
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  8842442 agcacggacactcctcggattaggcgtgtc 8842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 11493376 - 11493413
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattag 347  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  11493376 taattacactgaattatgtgattttctcacattattag 11493413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 11507469 - 11507514
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    ||||||||| ||||| || | |||||||||||||||||||||||||    
T  11507469 cgtgtccgataccgaaacatataattacactgaattatgtgatttt 11507514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 12083955 - 12083910
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||||||||||||  |||| |||| |||||||    
T  12083955 gacacttgtaattacactgaattatgtagttttctcaatttattag 12083910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 13845519 - 13845564
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 334  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||    
T  13845519 cgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 20503578 - 20503549
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  20503578 agcacggacactcctcggattaggcgtgtc 20503549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 363
Target Start/End: Complemental strand, 24633810 - 24633757
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtca 363  Q
    ||||| ||| ||||||||||||||| ||||||||||||   |||||||||||||    
T  24633810 taattgcaccgaattatgtgattttctcaaattattagtggtgtcggcatgtca 24633757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 34185058 - 34185087
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  34185058 agcacggacactcctcggattaggcgtgtc 34185087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 55401188 - 55401159
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  55401188 agcacggacactcctcggattaggcgtgtc 55401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 2620071 - 2620139
Alignment:
Q  313 ttacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||| |||||||||||||| |||||| |||||   ||||||| ||||||| |||| || |||||||    
T  2620071 ttacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 382
Target Start/End: Original strand, 5441046 - 5441118
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccgg 382  Q
    ||||| || |||||||||||||||| ||||||| |||||  || |||| ||||||| || |||| ||||||||    
T  5441046 taattccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccgg 5441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 6780414 - 6780466
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatt 342  Q
    |||||||||||| |||| | ||||||||||||| || |||||||| |||||||    
T  6780414 gtgtccgacaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 13620785 - 13620837
Alignment:
Q  316 cactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatc 368  Q
    |||||||| |||||||||| |||||||| ||||  ||||| ||||||||||||    
T  13620785 cactgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagtatc 13620837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Original strand, 16192765 - 16192801
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  16192765 taattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 21149131 - 21149075
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||| |||||  | | ||||||||||||||||| ||||| |||||||||||    
T  21149131 gtgtccgacaacgacatctttgattacactgaattatgtcattttctcaaattatta 21149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 39002076 - 39002044
Alignment:
Q  310 taattacactgaattatgtgattttttcaaatt 342  Q
    |||||||| ||||||||||||||||||||||||    
T  39002076 taattacattgaattatgtgattttttcaaatt 39002044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 20261 - 20140
Alignment:
Q  265 actcctcggattaggcgtgtcacacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcag 364  Q
    ||||||||||||||||||||| |||     |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||     
T  20261 actcctcggattaggcgtgtcccaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcat 20162  T
Q  365 tatccgtgttgtgtccggtgtc 386  Q
    | ||||||| ||||||||||||    
T  20161 tgtccgtgtcgtgtccggtgtc 20140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 404
Target Start/End: Complemental strand, 130538 - 130432
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtat 397  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||| | ||||||| |||||||||||| ||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtat 130439  T
Q  398 ccgtgct 404  Q
    || ||||    
T  130438 ccatgct 130432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 296 - 387
Target Start/End: Original strand, 178819 - 178911
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatg-tgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtca 387  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||||| ||||||| |||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtca 178911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 192256 - 192325
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||| |  ||||||| ||||||| |||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 241653 - 241562
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtc 386  Q
    |||||||||||||  |||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||| ||||||||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 241562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 51862 - 51792
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 51792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 294 - 395
Target Start/End: Complemental strand, 13460 - 13359
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||| | ||||||| ||||||| |||||||  | ||||||||| || |||    
T  13460 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatcc 13361  T
Q  394 gt 395  Q
    ||    
T  13360 gt 13359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 21867 - 21968
Alignment:
Q  294 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtcc 393  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||| | ||||||| ||||||| |||||||  | ||||||||| || |||    
T  21867 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatcc 21966  T
Q  394 gt 395  Q
    ||    
T  21967 gt 21968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 70343 - 70270
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||| ||||||    
T  70343 cgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtc 70270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 263372 - 263475
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||| ||||||| |||||||||||||||||||| |||| |||||||||||||  ||| | ||||||||| ||||||| || ||| ||||| |||||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccg 263471  T
Q  395 tatc 398  Q
    ||||    
T  263472 tatc 263475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 3849 - 3963
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatc-----cgtgttgtgtccggtgtcagt 389  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||| ||||| ||     ||||| ||||| |||||| ||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtcgtgtctggtgtccgt 3948  T
Q  390 gtccgtatccgtgct 404  Q
    |||| ||||||||||    
T  3949 gtccatatccgtgct 3963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 402
Target Start/End: Original strand, 225274 - 225375
Alignment:
Q  301 cgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatccg 400  Q
    |||||||| |||||||| || ||||||| ||||| ||||||||||| || ||||||| ||||||| ||||||| |||||||||||| ||||| || ||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 225373  T
Q  401 tg 402  Q
    ||    
T  225374 tg 225375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 14592 - 14522
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  14592 cgtgtccgacacc---acttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 368
Target Start/End: Complemental strand, 8074 - 7996
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatc 368  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| | ||||||| |||| |||||    
T  8074 cgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtctgtatc 7996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 401
Target Start/End: Complemental strand, 8725 - 8619
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||||| |||||| |||||| |||||||||||   ||||||||||   ||||| | ||||||| ||| ||| |||||||||||| ||||| |    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtccgtgtcgg 8626  T
Q  395 tatccgt 401  Q
    | |||||    
T  8625 tgtccgt 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 17750 - 17801
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 17801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 8635 - 8705
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagt 365  Q
    ||||||||||| ||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||    
T  8635 cgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcggcatgtcagt 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 23479 - 23393
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    |||||||||||||| |||||||||||||||||||||||||||  | |||||| || ||||||| ||||||| || |||| |||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 23393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 23570 - 23529
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  23570 cgacactgacacttataattacactgaattatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 7027 - 7092
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcg 355  Q
    |||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||| |||||    
T  7027 gtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcg 7092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 9957 - 9848
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccg 394  Q
    |||||||||||| | ||||||||||| ||| | ||||||| | |||  ||||||| ||||||| |||| || ||| ||| |||||||||||| |||||||    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccg 9858  T
Q  395 tatccgtgct 404  Q
    ||||||||||    
T  9857 tatccgtgct 9848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 92859 - 92790
Alignment:
Q  302 gacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgt 371  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||| ||||||| |||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 123686 - 123614
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtga---ttttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||||||||||||||||||||||||||||||||   |||||| |||||||||||| ||| ||| |||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagt 123614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 83219 - 83172
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaatt 342  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  83219 cgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 92935 - 92893
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtcacacgtgtccgaca 299  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  92935 agcacggacactcctcggattaggcgtgtc-caggtgtccgaca 92893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 23829 - 23777
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt-ttttcaaattatta 346  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 23777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 33375 - 33430
Alignment:
Q  307 ttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 19626 - 19549
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | | ||||| ||||||| || |||| |||||||    
T  19626 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 19549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 63837 - 63779
Alignment:
Q  290 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagc 63779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 4884 - 4945
Alignment:
Q  296 gacaccgacacttgtaattacactgaattatgtga-ttttttcaaattattagctctgtcgg 356  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  4884 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcgg 4945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 4827 - 4856
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  4827 agcacggacactcctcggattaggcgtgtc 4856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 398
Target Start/End: Complemental strand, 21143 - 20999
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc--acacgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgt 353  Q
    |||||||| ||| |||||||||||||||||  ||||     ||| |||||||| | |||||| || || |||||||||||| ||||||||||| |  |||    
T  21143 agcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgt 21044  T
Q  354 cggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgtatc 398  Q
    | |||||||||| ||||||| ||||| |||||| |||| ||||||    
T  21043 cagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgtatc 20999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 45524 - 45617
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgt-gattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccg 381  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||| | || ||||  | ||||| | ||||||| |||||||||||||||    
T  45524 cgtgtccgacaccgacacttgtaattacactgaattatgtatttttttttagataattaattgtgtcgacgtgtcagtgtccgtgttgtgtccg 45617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 71784 - 71712
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatt--ttttcaaattattagctctgtcggcatgtcagt 365  Q
    |||||| |||||| |||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  71784 cgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagt 71712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 395
Target Start/End: Complemental strand, 53236 - 53143
Alignment:
Q  298 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtgtccgt 395  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||| ||  | ||||| ||||||    ||||| |||||||||||  ||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag----cgtgtcgtgtccggtgttcgtgtccgt 53143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 135312 - 135365
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| | ||||||||| ||||||||||||||| |||||||||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagc 135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 9747 - 9799
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 347  Q
    |||||||||||| | |||||||||||||||| |||||||| ||||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

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Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 25768 - 25819
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||| |||||||||| |||||||||||||| || ||||||||    
T  25768 cgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

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Target: scaffold0227 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 7319 - 7378
Alignment:
Q  303 acacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtc 362  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||| | ||||||| ||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

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Target: scaffold0697 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 1709 - 1652
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 346  Q
    |||||||||||||||||||| |||||| ||  |||||| ||||||| |||||||||||    
T  1709 cgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 1652  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 44529 - 44578
Alignment:
Q  299 accgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||| | ||||||||||||||||||||||||| ||||||| |||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttagc 44578  T

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Target: scaffold0475 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 404
Target Start/End: Complemental strand, 3371 - 3266
Alignment:
Q  291 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgttgtgtccggtgtcagtg 390  Q
    |||||||||| |||||||||||||||||| ||||        || | ||||| |||||  ||||| | ||||||||||||||| |||||||||||| |||    
T  3371 tgtccgacactgacacttgtaattacacttaatt--------ttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgtg 3280  T
Q  391 tccgtatccgtgct 404  Q
    ||  ||||||||||    
T  3279 tctatatccgtgct 3266  T

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Target: scaffold0475; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 3421 - 3392
Alignment:
Q  256 agcacggacactcctcggattaggcgtgtc 285  Q
    ||||||||||||||||||||||||||||||    
T  3421 agcacggacactcctcggattaggcgtgtc 3392  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 174546 - 174594
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||||| ||||||||| |||||||||| ||||||||||| |||||||    
T  174546 acgtgtccaacaccgacatttgtaattacgctgaattatgtcatttttt 174594  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 180059 - 180107
Alignment:
Q  288 acgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||||| ||||||||| |||||||||| ||||||||||| |||||||    
T  180059 acgtgtccaacaccgacatttgtaattacgctgaattatgtcatttttt 180107  T

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Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 285
Target Start/End: Complemental strand, 188512 - 188484
Alignment:
Q  257 gcacggacactcctcggattaggcgtgtc 285  Q
    |||||||||||||||||||||||||||||    
T  188512 gcacggacactcctcggattaggcgtgtc 188484  T

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Target: scaffold1528 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 1076 - 1041
Alignment:
Q  313 ttacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||||||| |||||||||||||||||||    
T  1076 ttacactgaattatgtaattttttcaaattattagc 1041  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 19203 - 19126
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctctgtcggcatgtcagtatccgtgt 373  Q
    ||||||||||| || |||| |||||||||||||| ||||||| ||||||||| |  ||||||| ||| ||| |||||||    
T  19203 cgacaccgacatttttaatcacactgaattatgtcatttttt-aaattattaaccatgtcggcgtgttagtgtccgtgt 19126  T

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Target: scaffold0376 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 6371 - 6318
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 348  Q
    |||||||||||| | |||||||| |||||||||  ||||| |||||||||||||    
T  6371 cgacaccgacacatataattacattgaattatgcaattttgtcaaattattagc 6318  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 2987 - 2946
Alignment:
Q  295 cgacaccgacacttgtaattacactgaattatgtgatttttt 336  Q
    |||||| || ||||||||||||||| ||||||||||||||||    
T  2987 cgacactgatacttgtaattacactaaattatgtgatttttt 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 3052 - 3024
Alignment:
Q  256 agcacggacactcctcggattaggcgtgt 284  Q
    |||||||||||||||||||||||||||||    
T  3052 agcacggacactcctcggattaggcgtgt 3024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Original strand, 5030 - 5058
Alignment:
Q  289 cgtgtccgacaccgacacttgtaattaca 317  Q
    |||||||||||||||||||||||||||||    
T  5030 cgtgtccgacaccgacacttgtaattaca 5058  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 24071 - 24023
Alignment:
Q  308 tgtaattacactgaattatgtgattttttcaaattattagctctgtcgg 356  Q
    |||||||||||| ||||||| |||||||  |||||||||||| ||||||    
T  24071 tgtaattacactaaattatgagatttttgaaaattattagctgtgtcgg 24023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 90887 - 90851
Alignment:
Q  310 taattacactgaattatgtgattttttcaaattatta 346  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  90887 taattacactgaattatatgattttctcaaattatta 90851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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